Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003689

Physical Location & Seq

Genomic Coordinates Reverse (-)

2965347 .. 2971060

Gene Structure 5714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2904 bp

ATGTCTATCGACACTGATAAAAGCGTCATCTTAAGCTTTCCATCACCAACAAGTTCCAGTTTAAACAGTGCGCATGGGCAACCTTCACGTATTTCAACTGCAATTAGGAAATCTTGGTCCACAGTGACAACTCCAGTTAAGAAAGCATGGTTAGCAGTTACATTTCCAGTTAGGGAAATATGGTCACCATTGGCATGTCATGTTGGAGGGATAGTTGGCATGAGAACGATTGAGGATATCAGAGATTTTTTTCAAGATCTGAAGCCATGTTTGAGAGGAGTAGTTCTTCATGTGATACTTTGTTTCACATTGACGATTCTTCTGCCCATCAGTTTACCGTGGAAACTGATACTGAAGGGGAGATTCACGCTAACCTGGGAAAGGGTACTCGTGATATCATGCATTGCAATGTCAGTAGATCCGTTGTTCTTTTACATTCCAGTTGTGGATGAGAACAAAAAGTGTCTAGGAATGGACAGAACGTTAAGGACTGTAGTTCTTGTGTTGCGATCACTTACGGATCTCACCTTTACAGTCCACATTATAGCTCTGATATATGATCGGATCGACATCCCTTCGAACTCTGATTCTGAATCTAACCCGGAGAAGCATATTTATGAATGCATACTTAGGAGGATGAAGTGGTTGTCTAAAGATATTATAGTTGACTTTATTGCTATACTTCCCATTCCACAGGTCACAATAATAATAGTCCTTTTCAGAATGAGAGCGTCTGGTCATCTATATGAGATAGTCATTGGCAACATCTGTCTTCCTTTACAATTTTTTGCAAGGGGTTACCAAATCTATCACACTCAGAAGCAATTTCAGATGCTTGAGAAATGGGCTAAAAGTGTATTCTATTTTCTCATGTACATCATGGCTGGTCATGTTTTTGGAGCATATTGGTATTTTCTGTCCATTCAACGACAGATATCGTGTTGGCATCAGGCATGTAGAAATACTAAAGGGTGTAGAGCCACTAATTATTGCGAGGACACTAGTTCTTCAGCAGATATTAGAATCCTAAATGATTTTTGTCCTGTGAATCCATCCAATGCAACACTCTTTGATTTTGGAATATTTCTTGATGCTCTTCAATCTGGTAATACAGGATCGATAAGGTTCACAACAAAGTTTTTTTATACGTTCTGGTGGGGCATCAGAAACCTGAGTAATTTTGGGACTGACTTAGAAACAAGTAACTACGTGTGGGAAAACTGCTTTACAATTTGTATTTCTCTGGTTGGCCTGCTTCTGTTTCTCTATCTCATGGGAAATGTGCAGACATATATTCTTTGGGAATCTACAAAAGCATTGGAGGTTCAGGAGGGGAAAGTTAAGGCGAAATATGAACAAATAGATACTTGGATGTTAGATAATGATATCCCCGAAAAAATCAAGACAGAAGTGGTGAAAATCATAAAATACCAGAAAGCATTTGAAAGAAACTATGCTGCTGGTGTAGATGTTGATGTGGACTTGGTTTTTGTATTCAGTGCTATCACTACAAATGGCAATCGACCCATTGCAAGTAACCTGAAGGAGCATTTCTGCGTAAATGCCCTAAAGAAAGTATCCATCCTTCAAGGCGTGGGAGAAGATGAATTCAACTTTGTATTGAAGTATTTTAACCCTGTGATCTACGAGGAGAATAGCTACCTAGTTCGAGCAGGAGAGCCAGATGACAAAATGCTCATCATCACACAAGGCATGCTAGCTGTATATGTAGACAATAACACTGCATCAGGCTCCTCATCAGTTATCATACCCAAGTCGCGTATTGAGAAAGGTGAAGTTTATGGAGAAGAACTTCTGAACGGTCTTATTCCTATATCGACCCGAGATGTCAAATGCCAAACAAAAGTAGAAGCCTTTGCTCTCACAAGTCGTGGGTTGAAATATGTAGTAAAAATGCTGCGGCAAAGACGTACAACTTCGACATTGTTCTATGATCCAGAACAAGTAAACAAGGCATATAGAGAGTTAACAACTACAAGATCGGAGAAGTTGATACAGCAAAAGATGAAGATGGATTGCACGGAGAAAGATATACTTGAGTGGCTGTCAAGAAATGGTGTTCACCATGATCTGCAGACATCAGTTATGAAACACATAAAGGCTAATAGTGTACTGGAAGGAAACTTAGATGCTGAGGTGGATGTGAGGTATCTATTCTCTATTCATCTTCCCTGGAATATCGAATATGAAATAAAGAAGGATCTCTGCATGACTACTCTCTATGAAGTACCTGTACTTGATGGCGTTGATGAAGATGTGCTGCACCGCATCTGTATGTCTCTCGATCCAGTGGTTCTTCCGAAGAATAGCTGTGTGGTTAAACCAGGTGGCCAAATTGATCGAATGCTCATCATTGTAGAAGGTAAAATTACTTTGACTGAGCAGACTTTCCATATTTTAAGCAGATTAAGGAAGAGAGGCAACGTCGAAAAAATACTGAAGAAAGGCGATTTCTTTGGGGAGGAACTCCTGCCTTGGGCATTCCCTGACGTCTCTATTTCCAAATATAAACCTGATATGTCAAGAAAATATGTCGATTGCTGTGAAAAAGTAGAAGCTTTTTCTCTCACGAAGGAGGGTGTGGAAAGTGTAGTCGCCTACTATCGGGAGGGAACCAACGTTTTGGAGCAGTTGGAGAATGGTAGAGATGGTGTCGCTCATAGTAGAGGTACATGTACATCCACAGCCCCCACTATTGAGCAGAGACTTGACCAGCTTATTCAGCTCCAGGTTGACATGCTTCAACAGCATCGTGATGAAATGGCTAATCAGGGGCGGAGATTGGATGAGATGGCTGCATTCCTCGCCAGATTGGGATATCTGAACACACCGCCACCACCTCGTCCTCCTCCTCCTCCTCCTCGATTATCAAGAACAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

968

Amino Acids

110.51

Weight (kDa)

7.89

Isoelectric Point (pI)

40.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003689)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g05120
rosa_chinensis	RchiOBHm_Chr1g0324611 RchiOBHm_Chr5g0014651 RchiOBHm_Chr5g0014741
rosa_laevigata	RLG00000030187 RLG00000032136 RLG00000032137
rosa_multiflora	Rmu_sc0003893.1_g000002 Rmu_sc0003893.1_g000003 Rmu_sc0003893.1_g000007 Rmu_sc0013610.1_g000012
rosa_roxburghii	Rroxscaffold_159G00432980 Rroxscaffold_159G00432990 Rroxscaffold_1G00061790 Rroxscaffold_4G00325310 Rroxscaffold_4G00325330
rosa_rugosa	Rorug01G0047100.1 Rorug01G0047300 Rorug05G0020400 Rorug05G0020500
rosa_samantha	Rh1AG062700 Rh1AG062900 Rh1BG053100 Rh1CG064800 Rh1DG068900 Rh1DG069800 Rh5AG115900 Rh5BG112300 Rh5BG112800 Rh5CG124400 Rh7BG358300
rosa_wichuraiana	Rw1G005330 Rw5G009990 Rw5G010000 Rw5G010010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2514
Acc16I	TGCGCA	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	1731
AccII	CGCG	1 cut(s)	1780
AciI	CCGC	4 cut(s)	1921, 2287, 2797, 2852
AclI	AACGTT	2 cut(s)	482, 2640
AclWI	GGATC	7 cut(s)	413, 528, 572, 1123, 1949, 2229, 2300
AcoI	YGGCCR	1 cut(s)	2350
AcsI	RAATTY	1 cut(s)	1607
AcuI	CTGAAG	5 cut(s)	281, 374, 993, 1562, 2480
AcyI	GRCGYC	1 cut(s)	2511
AfaI	GTAC	8 cut(s)	387, 875, 1933, 2133, 2250, 2256, 2692, 2698
AfiI	CCNNNNNNNGG	3 cut(s)	381, 2497, 2625
AflII	CTTAAG	1 cut(s)	31
AflIII	ACRYGT	2 cut(s)	1209, 2693
AhlI	ACTAGT	1 cut(s)	1001
AjnI	CCWGG	4 cut(s)	374, 2192, 2344, 2748
AluBI	AGCT	9 cut(s)	36, 548, 1659, 1721, 2331, 2579, 2737, 2746, 2901
AluI	AGCT	9 cut(s)	36, 548, 1659, 1721, 2331, 2579, 2737, 2746, 2901
Alw26I	GTCTC	3 cut(s)	2304, 2518, 2719
AlwI	GGATC	7 cut(s)	413, 528, 572, 1123, 1949, 2229, 2300
Ama87I	CYCGRG	1 cut(s)	1842
AoxI	GGCC	2 cut(s)	1249, 2350
ApeKI	GCWGC	4 cut(s)	1457, 1918, 2281, 2816
ApoI	RAATTY	1 cut(s)	1607
ArsI	GACNNNNNNTTYG	2 cut(s)	1472, 1504
Asp700I	GAANNNNTTC	1 cut(s)	1812
AspLEI	GCGC	1 cut(s)	73
AspS9I	GGNCC	1 cut(s)	117
AsuC2I	CCSGG	1 cut(s)	602
AsuHPI	GGTGA	6 cut(s)	36, 177, 517, 1426, 1805, 2075
AsuII	TTCGAA	1 cut(s)	578
AsuNHI	GCTAGC	1 cut(s)	1717
AvaI	CYCGRG	1 cut(s)	1842
AvaII	GGWCC	1 cut(s)	117
BalI	TGGCCA	1 cut(s)	2352
BarI	GAAGNNNNNNTAC	4 cut(s)	1569, 1601, 2238, 2270
BauI	CACGAG	1 cut(s)	389
BbsI	GAAGAC	1 cut(s)	764
BbvCI	CCTCAGC	1 cut(s)	2154
BbvI	GCAGC	4 cut(s)	1444, 1905, 2268, 2803
BccI	CCATC	8 cut(s)	49, 335, 1060, 1589, 2026, 2255, 2663, 2806
BcgI	CGANNNNNNTGC	2 cut(s)	304, 338
BciT130I	CCWGG	4 cut(s)	376, 2194, 2346, 2750
BciVI	GTATCC	1 cut(s)	1588
BcnI	CCSGG	1 cut(s)	602
BcoDI	GTCTC	3 cut(s)	2304, 2518, 2719
BcuI	ACTAGT	1 cut(s)	1001
BfaI	CTAG	4 cut(s)	467, 1002, 1664, 1718
BfmI	CTRYAG	2 cut(s)	492, 2093
BfrI	CTTAAG	1 cut(s)	31
BfuI	GTATCC	1 cut(s)	1588
BglII	AGATCT	1 cut(s)	256
BisI	GCNGC	5 cut(s)	1458, 1919, 1922, 2282, 2817
BlsI	GCNGC	5 cut(s)	1459, 1920, 1923, 2283, 2818
Bme1390I	CCNGG	5 cut(s)	376, 602, 2194, 2346, 2750
Bme18I	GGWCC	1 cut(s)	117
BmeT110I	CYCGRG	1 cut(s)	1842
BmgT120I	GGNCC	1 cut(s)	117
BmiI	GGNNCC	2 cut(s)	1753, 2635
BmrFI	CCNGG	5 cut(s)	376, 602, 2194, 2346, 2750
BmsI	GCATC	8 cut(s)	822, 955, 1081, 1170, 1754, 2140, 2298, 2779
BmtI	GCTAGC	1 cut(s)	1721
BpiI	GAAGAC	1 cut(s)	764
BpmI	CTGGAG	2 cut(s)	117, 2732
Bpu10I	CCTNAGC	1 cut(s)	2154
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	2 cut(s)	857, 2078
BpuMI	CCSGG	1 cut(s)	602
Bsa29I	ATCGAT	1 cut(s)	1118
BsaAI	YACGTR	2 cut(s)	89, 1210
BsaBI	GATNNNNATC	1 cut(s)	569
BsaHI	GRCGYC	1 cut(s)	2511
BsaJI	CCNNGG	4 cut(s)	338, 375, 2192, 2495
BsaXI	ACNNNNNCTCC	2 cut(s)	198, 228
Bsc4I	CCNNNNNNNGG	3 cut(s)	381, 2497, 2625
Bse1I	ACTGG	6 cut(s)	57, 134, 167, 440, 2139, 2309
Bse3DI	GCAATG	3 cut(s)	402, 414, 1527
Bse8I	GATNNNNATC	1 cut(s)	569
BseBI	CCWGG	4 cut(s)	376, 2194, 2346, 2750
BseCI	ATCGAT	1 cut(s)	1118
BseDI	CCNNGG	4 cut(s)	338, 375, 2192, 2495
BseGI	GGATG	9 cut(s)	454, 570, 642, 1052, 1377, 1581, 2167, 2699, 2812
BseJI	GATNNNNATC	1 cut(s)	569
BseLI	CCNNNNNNNGG	3 cut(s)	381, 2497, 2625
BseMI	GCAATG	3 cut(s)	402, 414, 1527
BseMII	CTCAG	4 cut(s)	830, 1163, 2145, 2391
BseNI	ACTGG	6 cut(s)	57, 134, 167, 440, 2139, 2309
BseRI	GAGGAG	8 cut(s)	291, 1664, 1744, 2859, 2862, 2865, 2868, 2871
BseXI	GCAGC	4 cut(s)	1444, 1905, 2268, 2803
BsgI	GTGCAG	2 cut(s)	1304, 2267
Bsh1236I	CGCG	1 cut(s)	1780
BshFI	GGCC	2 cut(s)	1251, 2352
BshVI	ATCGAT	1 cut(s)	1118
BsiHKCI	CYCGRG	1 cut(s)	1842
BsiSI	CCGG	1 cut(s)	602
BslFI	GGGAC	1 cut(s)	1198
BslI	CCNNNNNNNGG	3 cut(s)	381, 2497, 2625
BsmAI	GTCTC	3 cut(s)	2304, 2518, 2719
BsmBI	CGTCTC	1 cut(s)	2518
BsmFI	GGGAC	1 cut(s)	1198
BsmI	GAATGC	4 cut(s)	626, 2370, 2501, 2819
BsnI	GGCC	2 cut(s)	1251, 2352
BsoBI	CYCGRG	1 cut(s)	1842
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1407I	TGTACA	2 cut(s)	873, 2696
BspACI	CCGC	4 cut(s)	1921, 2287, 2797, 2852
BspANI	GGCC	2 cut(s)	1251, 2352
BspCNI	CTCAG	4 cut(s)	829, 1164, 2146, 2392
BspDI	ATCGAT	1 cut(s)	1118
BspFNI	CGCG	1 cut(s)	1780
BspLI	GGNNCC	2 cut(s)	1753, 2635
BspMAI	CTGCAG	1 cut(s)	2097
BspOI	GCTAGC	1 cut(s)	1721
BspPI	GGATC	7 cut(s)	413, 528, 572, 1123, 1949, 2229, 2300
BspQI	GCTCTTC	1 cut(s)	1101
BspT104I	TTCGAA	1 cut(s)	578
BspTI	CTTAAG	1 cut(s)	31
BsrDI	GCAATG	3 cut(s)	402, 414, 1527
BsrGI	TGTACA	2 cut(s)	873, 2696
BsrI	ACTGG	6 cut(s)	57, 134, 167, 440, 2139, 2309
BssECI	CCNNGG	4 cut(s)	338, 375, 2192, 2495
BssNI	GRCGYC	1 cut(s)	2511
BssSI	CACGAG	1 cut(s)	389
BssT1I	CCWWGG	1 cut(s)	2495
Bst2BI	CACGAG	1 cut(s)	389
Bst2UI	CCWGG	4 cut(s)	376, 2194, 2346, 2750
Bst4CI	ACNGT	6 cut(s)	68, 124, 339, 493, 535, 1823
Bst6I	CTCTTC	2 cut(s)	1101, 2429
BstACI	GRCGYC	1 cut(s)	2511
BstAFI	CTTAAG	1 cut(s)	31
BstAUI	TGTACA	2 cut(s)	873, 2696
BstBAI	YACGTR	2 cut(s)	89, 1210
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	3 cut(s)	1253, 1715, 1719
BstDEI	CTNAG	7 cut(s)	629, 816, 1172, 1192, 2146, 2154, 2400
BstDSI	CCRYGG	1 cut(s)	338
BstEII	GGTNACC	2 cut(s)	183, 797
BstENI	CCTNNNNNAGG	1 cut(s)	379
BstF5I	GGATG	9 cut(s)	454, 570, 642, 1052, 1377, 1581, 2167, 2699, 2812
BstFNI	CGCG	1 cut(s)	1780
BstHHI	GCGC	1 cut(s)	73
BstMAI	GTCTC	3 cut(s)	2304, 2518, 2719
BstMWI	GCNNNNNNNGC	4 cut(s)	152, 2743, 2767, 2825
BstNI	CCWGG	4 cut(s)	376, 2194, 2346, 2750
BstNSI	RCATGY	5 cut(s)	198, 957, 1717, 2697, 2761
BstPI	GGTNACC	2 cut(s)	183, 797
BstSCI	CCNGG	5 cut(s)	374, 600, 2192, 2344, 2748
BstSFI	CTRYAG	2 cut(s)	492, 2093
BstUI	CGCG	1 cut(s)	1780
BstV1I	GCAGC	4 cut(s)	1444, 1905, 2268, 2803
BstV2I	GAAGAC	1 cut(s)	764
BstX2I	RGATCY	4 cut(s)	256, 418, 520, 2221
BstXI	CCANNNNNNTGG	1 cut(s)	2644
BstYI	RGATCY	4 cut(s)	256, 418, 520, 2221
Bsu15I	ATCGAT	1 cut(s)	1118
BsuI	GTATCC	1 cut(s)	1588
BsuRI	GGCC	2 cut(s)	1251, 2352
BsuTUI	ATCGAT	1 cut(s)	1118
BtgI	CCRYGG	1 cut(s)	338
BtsCI	GGATG	9 cut(s)	454, 570, 642, 1052, 1377, 1581, 2167, 2699, 2812
BtsI	GCAGTG	1 cut(s)	1740
BtsIMutI	CAGTG	6 cut(s)	12, 73, 129, 1504, 1740, 2316
Cac8I	GCNNGC	3 cut(s)	1253, 1715, 1719
CfoI	GCGC	1 cut(s)	73
Cfr13I	GGNCC	1 cut(s)	117
ClaI	ATCGAT	1 cut(s)	1118
CseI	GACGC	2 cut(s)	13, 720
CsiI	ACCWGGT	1 cut(s)	2344
Csp6I	GTAC	8 cut(s)	386, 874, 1932, 2132, 2249, 2255, 2691, 2697
CviQI	GTAC	8 cut(s)	386, 874, 1932, 2132, 2249, 2255, 2691, 2697
DdeI	CTNAG	7 cut(s)	629, 816, 1172, 1192, 2146, 2154, 2400
DraI	TTTAAA	1 cut(s)	63
EaeI	YGGCCR	1 cut(s)	2350
Eam1104I	CTCTTC	2 cut(s)	1101, 2429
EarI	CTCTTC	2 cut(s)	1101, 2429
EciI	GGCGGA	1 cut(s)	2812
Eco130I	CCWWGG	1 cut(s)	2495
Eco32I	GATATC	5 cut(s)	238, 396, 936, 1387, 2840
Eco47I	GGWCC	1 cut(s)	117
Eco57I	CTGAAG	5 cut(s)	281, 374, 993, 1562, 2480
Eco88I	CYCGRG	1 cut(s)	1842
Eco91I	GGTNACC	2 cut(s)	183, 797
EcoNI	CCTNNNNNAGG	1 cut(s)	379
EcoO65I	GGTNACC	2 cut(s)	183, 797
EcoRI	GAATTC	1 cut(s)	1607
EcoRII	CCWGG	4 cut(s)	374, 2192, 2344, 2748
EcoRV	GATATC	5 cut(s)	238, 396, 936, 1387, 2840
EcoT14I	CCWWGG	1 cut(s)	2495
EcoT22I	ATGCAT	2 cut(s)	404, 626
ErhI	CCWWGG	1 cut(s)	2495
Esp3I	CGTCTC	1 cut(s)	2518
FalI	AAGNNNNNCTT	2 cut(s)	2040, 2072
FaqI	GGGAC	1 cut(s)	1198
FblI	GTMKAC	1 cut(s)	1731
Fnu4HI	GCNGC	5 cut(s)	1458, 1919, 1922, 2282, 2817
FokI	GGATG	9 cut(s)	461, 557, 649, 1039, 1384, 1568, 2174, 2686, 2819
Fsp4HI	GCNGC	5 cut(s)	1458, 1919, 1922, 2282, 2817
FspAI	RTGCGCAY	1 cut(s)	72
FspBI	CTAG	4 cut(s)	467, 1002, 1664, 1718
FspI	TGCGCA	1 cut(s)	72
GlaI	GCGC	1 cut(s)	72
GluI	GCNGC	5 cut(s)	1458, 1919, 1922, 2282, 2817
GsuI	CTGGAG	2 cut(s)	117, 2732
HaeIII	GGCC	2 cut(s)	1251, 2352
HapII	CCGG	1 cut(s)	602
HgaI	GACGC	2 cut(s)	13, 720
HhaI	GCGC	1 cut(s)	73
Hin1I	GRCGYC	1 cut(s)	2511
Hin6I	GCGC	1 cut(s)	71
HinP1I	GCGC	1 cut(s)	71
HincII	GTYRAC	3 cut(s)	667, 1989, 2755
HindII	GTYRAC	3 cut(s)	667, 1989, 2755
HindIII	AAGCTT	2 cut(s)	34, 2577
HinfI	GANTC	7 cut(s)	316, 363, 587, 593, 1023, 1048, 1304
HpaI	GTTAAC	1 cut(s)	1989
HpaII	CCGG	1 cut(s)	602
HphI	GGTGA	6 cut(s)	36, 177, 517, 1426, 1805, 2075
Hpy99I	CGWCG	1 cut(s)	2450
HpyAV	CCTTC	9 cut(s)	93, 349, 585, 1537, 1595, 2132, 2212, 2375, 2587
HpyCH4III	ACNGT	6 cut(s)	68, 124, 339, 493, 535, 1823
HpyCH4IV	ACGT	8 cut(s)	88, 482, 1148, 1209, 1930, 2445, 2511, 2640
HpyF10VI	GCNNNNNNNGC	4 cut(s)	152, 2743, 2767, 2825
HpyF3I	CTNAG	7 cut(s)	629, 816, 1172, 1192, 2146, 2154, 2400
HpySE526I	ACGT	8 cut(s)	88, 482, 1148, 1209, 1930, 2445, 2511, 2640
Hsp92I	GRCGYC	1 cut(s)	2511
HspAI	GCGC	1 cut(s)	71
KspAI	GTTAAC	1 cut(s)	1989
LguI	GCTCTTC	1 cut(s)	1101
LmnI	GCTCC	5 cut(s)	899, 1546, 1757, 2647, 2751
Lsp1109I	GCAGC	4 cut(s)	1444, 1905, 2268, 2803
LweI	GCATC	8 cut(s)	822, 955, 1081, 1170, 1754, 2140, 2298, 2779
MabI	ACCWGGT	1 cut(s)	2344
MaeI	CTAG	4 cut(s)	467, 1002, 1664, 1718
MaeII	ACGT	8 cut(s)	88, 482, 1148, 1209, 1930, 2445, 2511, 2640
MaeIII	GTNAC	7 cut(s)	124, 157, 183, 697, 797, 1202, 1535
MflI	RGATCY	4 cut(s)	256, 418, 520, 2221
MlsI	TGGCCA	1 cut(s)	2352
MluCI	AATT	9 cut(s)	102, 782, 824, 985, 1177, 1230, 1607, 2355, 2388
MluNI	TGGCCA	1 cut(s)	2352
MmeI	TCCRAC	2 cut(s)	184, 2634
Mox20I	TGGCCA	1 cut(s)	2352
Mph1103I	ATGCAT	2 cut(s)	404, 626
MroXI	GAANNNNTTC	1 cut(s)	1812
MscI	TGGCCA	1 cut(s)	2352
MslI	CAYNNNNRTG	6 cut(s)	193, 407, 615, 744, 2294, 2775
Msp20I	TGGCCA	1 cut(s)	2352
MspCI	CTTAAG	1 cut(s)	31
MspI	CCGG	1 cut(s)	602
MspR9I	CCNGG	5 cut(s)	376, 602, 2194, 2346, 2750
MssI	GTTTAAAC	1 cut(s)	63
Mva1269I	GAATGC	4 cut(s)	626, 2370, 2501, 2819
MvaI	CCWGG	4 cut(s)	376, 2194, 2346, 2750
MvnI	CGCG	1 cut(s)	1780
MwoI	GCNNNNNNNGC	4 cut(s)	152, 2743, 2767, 2825
NciI	CCSGG	1 cut(s)	602
NheI	GCTAGC	1 cut(s)	1717
NlaIV	GGNNCC	2 cut(s)	1753, 2635
NmuCI	GTSAC	3 cut(s)	124, 183, 697
NsbI	TGCGCA	1 cut(s)	72
NsiI	ATGCAT	2 cut(s)	404, 626
NspI	RCATGY	5 cut(s)	198, 957, 1717, 2697, 2761
NspV	TTCGAA	1 cut(s)	578
PaeI	GCATGC	1 cut(s)	1717
PciI	ACATGT	1 cut(s)	2693
PciSI	GCTCTTC	1 cut(s)	1101
PctI	GAATGC	4 cut(s)	626, 2370, 2501, 2819
PdmI	GAANNNNTTC	1 cut(s)	1812
PfeI	GAWTC	7 cut(s)	316, 363, 587, 593, 1023, 1048, 1304
PkrI	GCNGC	5 cut(s)	1459, 1920, 1923, 2283, 2818
PmeI	GTTTAAAC	1 cut(s)	63
Ppu21I	YACGTR	2 cut(s)	89, 1210
PscI	ACATGT	1 cut(s)	2693
Psp1406I	AACGTT	2 cut(s)	482, 2640
Psp6I	CCWGG	4 cut(s)	374, 2192, 2344, 2748
PspEI	GGTNACC	2 cut(s)	183, 797
PspGI	CCWGG	4 cut(s)	374, 2192, 2344, 2748
PspN4I	GGNNCC	2 cut(s)	1753, 2635
PspPI	GGNCC	1 cut(s)	117
PstI	CTGCAG	1 cut(s)	2097
PsuI	RGATCY	4 cut(s)	256, 418, 520, 2221
RsaI	GTAC	8 cut(s)	387, 875, 1933, 2133, 2250, 2256, 2692, 2698
RsaNI	GTAC	8 cut(s)	386, 874, 1932, 2132, 2249, 2255, 2691, 2697
RseI	CAYNNNNRTG	6 cut(s)	193, 407, 615, 744, 2294, 2775
SapI	GCTCTTC	1 cut(s)	1101
SatI	GCNGC	5 cut(s)	1458, 1919, 1922, 2282, 2817
Sau96I	GGNCC	1 cut(s)	117
ScrFI	CCNGG	5 cut(s)	376, 602, 2194, 2346, 2750
SexAI	ACCWGGT	1 cut(s)	2344
SfaNI	GCATC	8 cut(s)	822, 955, 1081, 1170, 1754, 2140, 2298, 2779
SfcI	CTRYAG	2 cut(s)	492, 2093
SfuI	TTCGAA	1 cut(s)	578
SinI	GGWCC	1 cut(s)	117
SmiMI	CAYNNNNRTG	6 cut(s)	193, 407, 615, 744, 2294, 2775
SmlI	CTYRAG	3 cut(s)	31, 836, 2057
SmoI	CTYRAG	3 cut(s)	31, 836, 2057
SpeI	ACTAGT	1 cut(s)	1001
SphI	GCATGC	1 cut(s)	1717
Sse9I	AATT	9 cut(s)	102, 782, 824, 985, 1177, 1230, 1607, 2355, 2388
SsiI	CCGC	4 cut(s)	1921, 2287, 2797, 2852
SspI	AATATT	1 cut(s)	1083
SspMI	CTAG	4 cut(s)	467, 1002, 1664, 1718
StyD4I	CCNGG	5 cut(s)	374, 600, 2192, 2344, 2748
StyI	CCWWGG	1 cut(s)	2495
TaaI	ACNGT	6 cut(s)	68, 124, 339, 493, 535, 1823
TaiI	ACGT	8 cut(s)	91, 485, 1151, 1212, 1933, 2448, 2514, 2643
TasI	AATT	9 cut(s)	102, 782, 824, 985, 1177, 1230, 1607, 2355, 2388
TatI	WGTACW	4 cut(s)	873, 2131, 2254, 2696
TauI	GCSGC	1 cut(s)	1924
TfiI	GAWTC	7 cut(s)	316, 363, 587, 593, 1023, 1048, 1304
TscAI	CASTG	6 cut(s)	19, 73, 129, 1504, 1747, 2316
TseFI	GTSAC	3 cut(s)	124, 183, 697
TseI	GCWGC	4 cut(s)	1457, 1918, 2281, 2816
Tsp45I	GTSAC	3 cut(s)	124, 183, 697
TspGWI	ACGGA	3 cut(s)	411, 533, 2057
TspRI	CASTG	6 cut(s)	19, 73, 129, 1504, 1747, 2316
Vha464I	CTTAAG	1 cut(s)	31
VpaK11BI	GGWCC	1 cut(s)	117
XagI	CCTNNNNNAGG	1 cut(s)	379
XapI	RAATTY	1 cut(s)	1607
XceI	RCATGY	5 cut(s)	198, 957, 1717, 2697, 2761
XmiI	GTMKAC	1 cut(s)	1731
XmnI	GAANNNNTTC	1 cut(s)	1812
XspI	CTAG	4 cut(s)	467, 1002, 1664, 1718
ZraI	GACGTC	1 cut(s)	2512
Zsp2I	ATGCAT	2 cut(s)	404, 626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.