Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g05120 |
| rosa_chinensis | RchiOBHm_Chr1g0324611 RchiOBHm_Chr5g0014651 RchiOBHm_Chr5g0014741 |
| rosa_laevigata | RLG00000030187 RLG00000032136 RLG00000032137 |
| rosa_multiflora | Rmu_sc0003893.1_g000002 Rmu_sc0003893.1_g000003 Rmu_sc0003893.1_g000007 Rmu_sc0013610.1_g000012 |
| rosa_roxburghii | Rroxscaffold_159G00432980 Rroxscaffold_159G00432990 Rroxscaffold_1G00061790 Rroxscaffold_4G00325310 Rroxscaffold_4G00325330 |
| rosa_rugosa | Rorug01G0047100.1 Rorug01G0047300 Rorug05G0020400 Rorug05G0020500 |
| rosa_samantha | Rh1AG062700 Rh1AG062900 Rh1BG053100 Rh1CG064800 Rh1DG068900 Rh1DG069800 Rh5AG115900 Rh5BG112300 Rh5BG112800 Rh5CG124400 Rh7BG358300 |
| rosa_wichuraiana | Rw1G005330 Rw5G009990 Rw5G010000 Rw5G010010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 211 |
| Acc36I | ACCTGC | 1 cut(s) | 2657 |
| Acc65I | GGTACC | 1 cut(s) | 196 |
| AccB1I | GGYRCC | 2 cut(s) | 196, 1742 |
| AccI | GTMKAC | 2 cut(s) | 1623, 1980 |
| AccII | CGCG | 1 cut(s) | 388 |
| AccIII | TCCGGA | 1 cut(s) | 1969 |
| AciI | CCGC | 6 cut(s) | 346, 388, 1936, 1939, 2300, 2312 |
| AclI | AACGTT | 1 cut(s) | 765 |
| AclWI | GGATC | 8 cut(s) | 48, 61, 428, 441, 1123, 1961, 1966, 2682 |
| AcoI | YGGCCR | 1 cut(s) | 886 |
| AcsI | RAATTY | 4 cut(s) | 370, 1236, 1349, 1657 |
| AcuI | CTGAAG | 4 cut(s) | 319, 1413, 1755, 2105 |
| AcyI | GRCGYC | 1 cut(s) | 208 |
| AdeI | CACNNNGTG | 1 cut(s) | 1152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 387, 1213, 1739 |
| AflIII | ACRYGT | 2 cut(s) | 953, 2268 |
| AhlI | ACTAGT | 2 cut(s) | 277, 703 |
| AjiI | CACGTC | 2 cut(s) | 586, 2269 |
| AjnI | CCWGG | 3 cut(s) | 49, 2183, 2486 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 425, 457, 1791, 1823, 2815, 2847 |
| Alw26I | GTCTC | 1 cut(s) | 2295 |
| AlwI | GGATC | 8 cut(s) | 48, 61, 428, 441, 1123, 1961, 1966, 2682 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 758, 2672 |
| Ama87I | CYCGRG | 2 cut(s) | 1610, 1848 |
| Aor13HI | TCCGGA | 1 cut(s) | 1969 |
| AoxI | GGCC | 2 cut(s) | 846, 886 |
| ApeKI | GCWGC | 6 cut(s) | 752, 1638, 2314, 2322, 2789, 2840 |
| ApoI | RAATTY | 4 cut(s) | 370, 1236, 1349, 1657 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 198, 230, 1460, 1492 |
| AseI | ATTAAT | 2 cut(s) | 359, 1602 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1806, 2478 |
| Asp718I | GGTACC | 1 cut(s) | 196 |
| AspS9I | GGNCC | 2 cut(s) | 670, 846 |
| AsuC2I | CCSGG | 1 cut(s) | 2072 |
| AsuHPI | GGTGA | 3 cut(s) | 256, 1799, 2387 |
| AvaI | CYCGRG | 2 cut(s) | 1610, 1848 |
| AvaII | GGWCC | 1 cut(s) | 670 |
| BaeGI | GKGCMC | 1 cut(s) | 591 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1498, 1531, 2036, 2069 |
| BalI | TGGCCA | 1 cut(s) | 888 |
| BamHI | GGATCC | 2 cut(s) | 53, 433 |
| BanI | GGYRCC | 2 cut(s) | 196, 1742 |
| BbsI | GAAGAC | 3 cut(s) | 1409, 2093, 2271 |
| BbvCI | CCTCAGC | 2 cut(s) | 2145, 2513 |
| BbvI | GCAGC | 5 cut(s) | 764, 1625, 2309, 2326, 2776 |
| BccI | CCATC | 8 cut(s) | 695, 1060, 1366, 1577, 1949, 2612, 2651, 2779 |
| BciT130I | CCWGG | 3 cut(s) | 51, 2185, 2488 |
| BciVI | GTATCC | 4 cut(s) | 390, 1397, 1576, 1933 |
| BclI | TGATCA | 2 cut(s) | 7, 1576 |
| BcnI | CCSGG | 1 cut(s) | 2072 |
| BcoDI | GTCTC | 1 cut(s) | 2295 |
| BcuI | ACTAGT | 2 cut(s) | 277, 703 |
| BfaI | CTAG | 6 cut(s) | 278, 653, 704, 1361, 1976, 2115 |
| BfmI | CTRYAG | 3 cut(s) | 1556, 2817, 2838 |
| BfuAI | ACCTGC | 1 cut(s) | 2657 |
| BfuI | GTATCC | 4 cut(s) | 390, 1397, 1576, 1933 |
| BglII | AGATCT | 4 cut(s) | 535, 1718, 2080, 2214 |
| BisI | GCNGC | 9 cut(s) | 753, 1639, 1937, 1940, 2300, 2315, 2323, 2790, 2841 |
| BlsI | GCNGC | 9 cut(s) | 754, 1640, 1938, 1941, 2301, 2316, 2324, 2791, 2842 |
| BmcAI | AGTACT | 1 cut(s) | 1139 |
| Bme1390I | CCNGG | 4 cut(s) | 51, 2072, 2185, 2488 |
| Bme18I | GGWCC | 1 cut(s) | 670 |
| BmeT110I | CYCGRG | 2 cut(s) | 1610, 1848 |
| BmgBI | CACGTC | 2 cut(s) | 586, 2269 |
| BmgT120I | GGNCC | 2 cut(s) | 670, 846 |
| BmiI | GGNNCC | 5 cut(s) | 55, 198, 435, 1744, 2241 |
| BmrFI | CCNGG | 4 cut(s) | 51, 2072, 2185, 2488 |
| BmrI | ACTGGG | 2 cut(s) | 1506, 2816 |
| BmuI | ACTGGG | 2 cut(s) | 1506, 2816 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2093 |
| BpiI | GAAGAC | 3 cut(s) | 1409, 2093, 2271 |
| BpmI | CTGGAG | 1 cut(s) | 2705 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2145, 2508, 2513 |
| BpuEI | CTTGAG | 2 cut(s) | 2069, 2315 |
| BpuMI | CCSGG | 1 cut(s) | 2072 |
| Bsa29I | ATCGAT | 1 cut(s) | 462 |
| BsaAI | YACGTR | 1 cut(s) | 1921 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2079, 2219, 2360 |
| BsaHI | GRCGYC | 1 cut(s) | 208 |
| BsaJI | CCNNGG | 2 cut(s) | 2184, 2487 |
| BsaWI | WCCGGW | 1 cut(s) | 1969 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 575, 605, 1791, 1821, 2815, 2845 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 387, 1213, 1739 |
| Bse1I | ACTGG | 6 cut(s) | 57, 763, 1501, 1616, 2130, 2811 |
| Bse3DI | GCAATG | 1 cut(s) | 518 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2079, 2219, 2360 |
| BseAI | TCCGGA | 1 cut(s) | 1969 |
| BseBI | CCWGG | 3 cut(s) | 51, 2185, 2488 |
| BseCI | ATCGAT | 1 cut(s) | 462 |
| BseDI | CCNNGG | 2 cut(s) | 2184, 2487 |
| BseJI | GATNNNNATC | 3 cut(s) | 2079, 2219, 2360 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 387, 1213, 1739 |
| BseMI | GCAATG | 1 cut(s) | 518 |
| BseMII | CTCAG | 9 cut(s) | 99, 265, 578, 1186, 2136, 2222, 2499, 2504, 2664 |
| BseNI | ACTGG | 6 cut(s) | 57, 763, 1501, 1616, 2130, 2811 |
| BseRI | GAGGAG | 2 cut(s) | 2820, 2823 |
| BseSI | GKGCMC | 1 cut(s) | 591 |
| BseXI | GCAGC | 5 cut(s) | 764, 1625, 2309, 2326, 2776 |
| BsgI | GTGCAG | 1 cut(s) | 1304 |
| Bsh1236I | CGCG | 1 cut(s) | 388 |
| BshFI | GGCC | 2 cut(s) | 848, 888 |
| BshNI | GGYRCC | 2 cut(s) | 196, 1742 |
| BshVI | ATCGAT | 1 cut(s) | 462 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1610, 1848 |
| BsiSI | CCGG | 2 cut(s) | 1970, 2071 |
| BslFI | GGGAC | 3 cut(s) | 219, 1933, 2781 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 387, 1213, 1739 |
| BsmAI | GTCTC | 1 cut(s) | 2295 |
| BsmFI | GGGAC | 3 cut(s) | 219, 1933, 2781 |
| BsmI | GAATGC | 2 cut(s) | 857, 1677 |
| BsnI | GGCC | 2 cut(s) | 848, 888 |
| BsoBI | CYCGRG | 2 cut(s) | 1610, 1848 |
| Bsp1286I | GDGCHC | 1 cut(s) | 591 |
| Bsp13I | TCCGGA | 1 cut(s) | 1969 |
| Bsp1407I | TGTACA | 2 cut(s) | 873, 956 |
| BspACI | CCGC | 6 cut(s) | 346, 388, 1936, 1939, 2300, 2312 |
| BspANI | GGCC | 2 cut(s) | 848, 888 |
| BspCNI | CTCAG | 9 cut(s) | 98, 264, 577, 1185, 2137, 2223, 2500, 2505, 2665 |
| BspDI | ATCGAT | 1 cut(s) | 462 |
| BspEI | TCCGGA | 1 cut(s) | 1969 |
| BspFNI | CGCG | 1 cut(s) | 388 |
| BspLI | GGNNCC | 5 cut(s) | 55, 198, 435, 1744, 2241 |
| BspMAI | CTGCAG | 2 cut(s) | 2821, 2842 |
| BspMI | ACCTGC | 1 cut(s) | 2657 |
| BspPI | GGATC | 8 cut(s) | 48, 61, 428, 441, 1123, 1961, 1966, 2682 |
| BspQI | GCTCTTC | 1 cut(s) | 2469 |
| BspT107I | GGYRCC | 2 cut(s) | 196, 1742 |
| BsrDI | GCAATG | 1 cut(s) | 518 |
| BsrGI | TGTACA | 2 cut(s) | 873, 956 |
| BsrI | ACTGG | 6 cut(s) | 57, 763, 1501, 1616, 2130, 2811 |
| BssECI | CCNNGG | 2 cut(s) | 2184, 2487 |
| BssNAI | GTATAC | 1 cut(s) | 1981 |
| BssNI | GRCGYC | 1 cut(s) | 208 |
| Bst1107I | GTATAC | 1 cut(s) | 1981 |
| Bst2UI | CCWGG | 3 cut(s) | 51, 2185, 2488 |
| Bst4CI | ACNGT | 4 cut(s) | 1223, 1260, 2386, 2462 |
| Bst6I | CTCTTC | 3 cut(s) | 1526, 1797, 2469 |
| BstACI | GRCGYC | 1 cut(s) | 208 |
| BstAUI | TGTACA | 2 cut(s) | 873, 956 |
| BstBAI | YACGTR | 1 cut(s) | 1921 |
| BstC8I | GCNNGC | 2 cut(s) | 1741, 1894 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1737 |
| BstFNI | CGCG | 1 cut(s) | 388 |
| BstMAI | GTCTC | 1 cut(s) | 2295 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 152, 854, 1736, 2716 |
| BstNI | CCWGG | 3 cut(s) | 51, 2185, 2488 |
| BstNSI | RCATGY | 3 cut(s) | 957, 1513, 1896 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2093 |
| BstSCI | CCNGG | 4 cut(s) | 49, 2070, 2183, 2486 |
| BstSFI | CTRYAG | 3 cut(s) | 1556, 2817, 2838 |
| BstSLI | GKGCMC | 1 cut(s) | 591 |
| BstSNI | TACGTA | 1 cut(s) | 1921 |
| BstUI | CGCG | 1 cut(s) | 388 |
| BstV1I | GCAGC | 5 cut(s) | 764, 1625, 2309, 2326, 2776 |
| BstV2I | GAAGAC | 3 cut(s) | 1409, 2093, 2271 |
| BstX2I | RGATCY | 7 cut(s) | 53, 433, 535, 1718, 2080, 2214, 2687 |
| BstYI | RGATCY | 7 cut(s) | 53, 433, 535, 1718, 2080, 2214, 2687 |
| BstZ17I | GTATAC | 1 cut(s) | 1981 |
| Bsu15I | ATCGAT | 1 cut(s) | 462 |
| BsuI | GTATCC | 4 cut(s) | 390, 1397, 1576, 1933 |
| BsuRI | GGCC | 2 cut(s) | 848, 888 |
| BsuTUI | ATCGAT | 1 cut(s) | 462 |
| BtgZI | GCGATG | 1 cut(s) | 2448 |
| BtrI | CACGTC | 2 cut(s) | 586, 2269 |
| BtsI | GCAGTG | 2 cut(s) | 1419, 2499 |
| BtsIMutI | CAGTG | 4 cut(s) | 435, 1419, 2391, 2499 |
| BveI | ACCTGC | 1 cut(s) | 2657 |
| Cac8I | GCNNGC | 2 cut(s) | 1741, 1894 |
| CaiI | CAGNNNCTG | 2 cut(s) | 758, 2672 |
| Cfr13I | GGNCC | 2 cut(s) | 670, 846 |
| ClaI | ATCGAT | 1 cut(s) | 462 |
| DraI | TTTAAA | 2 cut(s) | 639, 829 |
| DraIII | CACNNNGTG | 1 cut(s) | 1152 |
| EaeI | YGGCCR | 1 cut(s) | 886 |
| Eam1104I | CTCTTC | 3 cut(s) | 1526, 1797, 2469 |
| EarI | CTCTTC | 3 cut(s) | 1526, 1797, 2469 |
| Eco105I | TACGTA | 1 cut(s) | 1921 |
| Eco32I | GATATC | 6 cut(s) | 622, 648, 658, 740, 2191, 2813 |
| Eco47I | GGWCC | 1 cut(s) | 670 |
| Eco57I | CTGAAG | 4 cut(s) | 319, 1413, 1755, 2105 |
| Eco88I | CYCGRG | 2 cut(s) | 1610, 1848 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1737 |
| EcoO109I | RGGNCCY | 1 cut(s) | 670 |
| EcoRII | CCWGG | 3 cut(s) | 49, 2183, 2486 |
| EcoRV | GATATC | 6 cut(s) | 622, 648, 658, 740, 2191, 2813 |
| FaqI | GGGAC | 3 cut(s) | 219, 1933, 2781 |
| FauI | CCCGC | 2 cut(s) | 381, 2319 |
| FauNDI | CATATG | 2 cut(s) | 297, 1990 |
| FbaI | TGATCA | 2 cut(s) | 7, 1576 |
| FblI | GTMKAC | 2 cut(s) | 1623, 1980 |
| Fnu4HI | GCNGC | 9 cut(s) | 753, 1639, 1937, 1940, 2300, 2315, 2323, 2790, 2841 |
| Fsp4HI | GCNGC | 9 cut(s) | 753, 1639, 1937, 1940, 2300, 2315, 2323, 2790, 2841 |
| FspBI | CTAG | 6 cut(s) | 278, 653, 704, 1361, 1976, 2115 |
| GluI | GCNGC | 9 cut(s) | 753, 1639, 1937, 1940, 2300, 2315, 2323, 2790, 2841 |
| GsuI | CTGGAG | 1 cut(s) | 2705 |
| HaeIII | GGCC | 2 cut(s) | 848, 888 |
| HapII | CCGG | 2 cut(s) | 1970, 2071 |
| Hin1I | GRCGYC | 1 cut(s) | 208 |
| HincII | GTYRAC | 1 cut(s) | 120 |
| HindII | GTYRAC | 1 cut(s) | 120 |
| HinfI | GANTC | 6 cut(s) | 97, 247, 568, 731, 2275, 2622 |
| HpaII | CCGG | 2 cut(s) | 1970, 2071 |
| HphI | GGTGA | 3 cut(s) | 256, 1799, 2387 |
| Hpy166II | GTNNAC | 5 cut(s) | 120, 1468, 1624, 1769, 1981 |
| Hpy8I | GTNNAC | 5 cut(s) | 120, 1468, 1624, 1769, 1981 |
| HpyCH4III | ACNGT | 4 cut(s) | 1223, 1260, 2386, 2462 |
| HpyCH4IV | ACGT | 9 cut(s) | 208, 585, 765, 1774, 1920, 2067, 2121, 2256, 2268 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 152, 854, 1736, 2716 |
| HpySE526I | ACGT | 9 cut(s) | 208, 585, 765, 1774, 1920, 2067, 2121, 2256, 2268 |
| Hsp92I | GRCGYC | 1 cut(s) | 208 |
| Kpn2I | TCCGGA | 1 cut(s) | 1969 |
| KpnI | GGTACC | 1 cut(s) | 200 |
| Ksp22I | TGATCA | 2 cut(s) | 7, 1576 |
| LguI | GCTCTTC | 1 cut(s) | 2469 |
| LmnI | GCTCC | 3 cut(s) | 1972, 1996, 2724 |
| Lsp1109I | GCAGC | 5 cut(s) | 764, 1625, 2309, 2326, 2776 |
| MaeI | CTAG | 6 cut(s) | 278, 653, 704, 1361, 1976, 2115 |
| MaeII | ACGT | 9 cut(s) | 208, 585, 765, 1774, 1920, 2067, 2121, 2256, 2268 |
| MaeIII | GTNAC | 5 cut(s) | 280, 1202, 2117, 2386, 2726 |
| MfeI | CAATTG | 2 cut(s) | 225, 1662 |
| MflI | RGATCY | 7 cut(s) | 53, 433, 535, 1718, 2080, 2214, 2687 |
| MhlI | GDGCHC | 1 cut(s) | 591 |
| MlsI | TGGCCA | 1 cut(s) | 888 |
| MluNI | TGGCCA | 1 cut(s) | 888 |
| MlyI | GAGTC | 2 cut(s) | 91, 2284 |
| MmeI | TCCRAC | 5 cut(s) | 618, 715, 817, 1950, 2622 |
| Mox20I | TGGCCA | 1 cut(s) | 888 |
| MroI | TCCGGA | 1 cut(s) | 1969 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1806, 2478 |
| MscI | TGGCCA | 1 cut(s) | 888 |
| MslI | CAYNNNNRTG | 2 cut(s) | 558, 2748 |
| Msp20I | TGGCCA | 1 cut(s) | 888 |
| MspA1I | CMGCKG | 1 cut(s) | 2302 |
| MspI | CCGG | 2 cut(s) | 1970, 2071 |
| MspR9I | CCNGG | 4 cut(s) | 51, 2072, 2185, 2488 |
| MunI | CAATTG | 2 cut(s) | 225, 1662 |
| Mva1269I | GAATGC | 2 cut(s) | 857, 1677 |
| MvaI | CCWGG | 3 cut(s) | 51, 2185, 2488 |
| MvnI | CGCG | 1 cut(s) | 388 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 152, 854, 1736, 2716 |
| NciI | CCSGG | 1 cut(s) | 2072 |
| NdeI | CATATG | 2 cut(s) | 297, 1990 |
| NlaIV | GGNNCC | 5 cut(s) | 55, 198, 435, 1744, 2241 |
| NmuCI | GTSAC | 3 cut(s) | 280, 2386, 2726 |
| NspI | RCATGY | 3 cut(s) | 957, 1513, 1896 |
| PaeI | GCATGC | 1 cut(s) | 1896 |
| PaeR7I | CTCGAG | 1 cut(s) | 1610 |
| PciI | ACATGT | 1 cut(s) | 953 |
| PciSI | GCTCTTC | 1 cut(s) | 2469 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 591, 1824 |
| PctI | GAATGC | 2 cut(s) | 857, 1677 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1806, 2478 |
| PfeI | GAWTC | 4 cut(s) | 247, 568, 731, 2622 |
| PfoI | TCCNGGA | 1 cut(s) | 2070 |
| PkrI | GCNGC | 9 cut(s) | 754, 1640, 1938, 1941, 2301, 2316, 2324, 2791, 2842 |
| PleI | GAGTC | 2 cut(s) | 91, 2283 |
| PpsI | GAGTC | 2 cut(s) | 91, 2283 |
| Ppu21I | YACGTR | 1 cut(s) | 1921 |
| PpuMI | RGGWCCY | 1 cut(s) | 670 |
| PscI | ACATGT | 1 cut(s) | 953 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2093 |
| PshBI | ATTAAT | 2 cut(s) | 359, 1602 |
| Psp1406I | AACGTT | 1 cut(s) | 765 |
| Psp5II | RGGWCCY | 1 cut(s) | 670 |
| Psp6I | CCWGG | 3 cut(s) | 49, 2183, 2486 |
| PspGI | CCWGG | 3 cut(s) | 49, 2183, 2486 |
| PspN4I | GGNNCC | 5 cut(s) | 55, 198, 435, 1744, 2241 |
| PspPI | GGNCC | 2 cut(s) | 670, 846 |
| PspPPI | RGGWCCY | 1 cut(s) | 670 |
| PspXI | VCTCGAGB | 1 cut(s) | 1610 |
| PstI | CTGCAG | 2 cut(s) | 2821, 2842 |
| PstNI | CAGNNNCTG | 2 cut(s) | 758, 2672 |
| PsuI | RGATCY | 7 cut(s) | 53, 433, 535, 1718, 2080, 2214, 2687 |
| RseI | CAYNNNNRTG | 2 cut(s) | 558, 2748 |
| SapI | GCTCTTC | 1 cut(s) | 2469 |
| SatI | GCNGC | 9 cut(s) | 753, 1639, 1937, 1940, 2300, 2315, 2323, 2790, 2841 |
| Sau96I | GGNCC | 2 cut(s) | 670, 846 |
| SbfI | CCTGCAGG | 1 cut(s) | 2821 |
| ScaI | AGTACT | 1 cut(s) | 1139 |
| SchI | GAGTC | 2 cut(s) | 91, 2284 |
| ScrFI | CCNGG | 4 cut(s) | 51, 2072, 2185, 2488 |
| SdaI | CCTGCAGG | 1 cut(s) | 2821 |
| SduI | GDGCHC | 1 cut(s) | 591 |
| SfcI | CTRYAG | 3 cut(s) | 1556, 2817, 2838 |
| Sfr274I | CTCGAG | 1 cut(s) | 1610 |
| SinI | GGWCC | 1 cut(s) | 670 |
| SlaI | CTCGAG | 1 cut(s) | 1610 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 558, 2748 |
| SmlI | CTYRAG | 3 cut(s) | 1610, 2048, 2294 |
| SmoI | CTYRAG | 3 cut(s) | 1610, 2048, 2294 |
| SnaBI | TACGTA | 1 cut(s) | 1921 |
| SpeI | ACTAGT | 2 cut(s) | 277, 703 |
| SphI | GCATGC | 1 cut(s) | 1896 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2821 |
| SsiI | CCGC | 6 cut(s) | 346, 388, 1936, 1939, 2300, 2312 |
| SspI | AATATT | 1 cut(s) | 176 |
| SspMI | CTAG | 6 cut(s) | 278, 653, 704, 1361, 1976, 2115 |
| StyD4I | CCNGG | 4 cut(s) | 49, 2070, 2183, 2486 |
| TaaI | ACNGT | 4 cut(s) | 1223, 1260, 2386, 2462 |
| TaiI | ACGT | 9 cut(s) | 211, 588, 768, 1777, 1923, 2070, 2124, 2259, 2271 |
| TaqI | TCGA | 9 cut(s) | 240, 376, 462, 603, 666, 1071, 1611, 1961, 2193 |
| TaqII | GACCGA | 1 cut(s) | 1421 |
| TatI | WGTACW | 3 cut(s) | 873, 956, 1137 |
| TauI | GCSGC | 3 cut(s) | 1939, 1942, 2302 |
| TfiI | GAWTC | 4 cut(s) | 247, 568, 731, 2622 |
| TscAI | CASTG | 4 cut(s) | 435, 1419, 2391, 2506 |
| TseFI | GTSAC | 3 cut(s) | 280, 2386, 2726 |
| TseI | GCWGC | 6 cut(s) | 752, 1638, 2314, 2322, 2789, 2840 |
| Tsp45I | GTSAC | 3 cut(s) | 280, 2386, 2726 |
| TspGWI | ACGGA | 5 cut(s) | 86, 280, 1754, 2438, 2785 |
| TspRI | CASTG | 4 cut(s) | 435, 1419, 2391, 2506 |
| VpaK11BI | GGWCC | 1 cut(s) | 670 |
| VspI | ATTAAT | 2 cut(s) | 359, 1602 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1737 |
| XapI | RAATTY | 4 cut(s) | 370, 1236, 1349, 1657 |
| XbaI | TCTAGA | 1 cut(s) | 652 |
| XceI | RCATGY | 3 cut(s) | 957, 1513, 1896 |
| XhoI | CTCGAG | 1 cut(s) | 1610 |
| XmiI | GTMKAC | 2 cut(s) | 1623, 1980 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1806, 2478 |
| XspI | CTAG | 6 cut(s) | 278, 653, 704, 1361, 1976, 2115 |
| ZraI | GACGTC | 1 cut(s) | 209 |
| ZrmI | AGTACT | 1 cut(s) | 1139 |