Rorug01G0047300

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003689
Physical Location & Seq
Forward (+)
7879665 .. 7882838
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0047300.1

Sequence Viewer

Length: 2568 bp
ATGATAGAAAGGCAGTTGTGTAGAATAAAGGTGCTTGTTGTTATTGATGATGTGGATCAGTTGACACAATTAGAGAAATTGGCTGGAAGTCGCAACTGGTTTGGTCCAGGGAGTAAAATTATCATAACCACCACAGATGTTCAGTTGTTAAAGGCACATGATGTTGACGCTACATACGAGGCTAGCGGGTTAAACTGTGATGAAGCACTTCAACTTTTGAATTTGAAGGCTTTTAAGAAATGCCCCCCACCAGAAGATTATTTGCATCTGTGCTACGATATTATAGGGTATGCTAAGGGGCTTCCGTTGGCTCTCGTGGTTTTAGGTTCTTTTCTATTTGGTAGAAGCACTGATGAATGGGCAAGTGCAATAGATAGGCTAAAGAACACACCACACAAACGCATCATTGAGGTGCTTCGGATTAGTTTTGATGGACTGAATGAAAAAGACAAAGAAATATTCCTACATATTGCTTGCTTTTACAAGGGGAAGGATAAGGATCGAGTTACACAAATACTAAACTATTGCCAGCTAGACCCTGTCATTGGTTTAAGTGTTCTTGTTGATAGATCTCTCATAACTATCTCCAACAACAAACTGTCGATGCATGATTTGCTACAAGAAATGGGCTGGGAAATTGTTCGTGAACAGTCTCCTAAAGAGCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCAACAATGTGCTGAAGAGAAATAAGGGAACAGATTCAATCCAAGGCATGGTAATGGAGTTGACTAAATTACAAGTGGCTCATTGGAAGCCAGAAGCCTTTTCAAATTTGTCTCAACTTAGTCTTCTCCATATTCGTAATGTGGACCTTCCCAAAGGCCTCACTTGTCTTTCTAATTCCTTGAGACTCCTCGAATGGACTGGGTATCCCTTCAGATATCTCCCACAAAATTTTGAAGCAGATGAACTAATTGAACTTAACTTGTGCCACAGCAACATTGAACAGCTTTGGAAGGGAACAAAGAATTTTGACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAACATTGTGGAGACCCCAGACCTCGCAGGCGTTCAGAATCTTGAGAGTTTAGATCATGAAGGATGTGAGAATTTGGTAAGAGTCCATCAATCCCTTGGATTTCTCAAAAAGCTTATTGTCCTGAATCTTAAAGACTGCAAAAGTCTCGAGAGTCTGCCAAGTAGAATTGAAATGGAATCTCTTGAAACATTAATTCTTTCTAACTGCTCAAAAGTTAAGAAAATTCCCCAGTTTGTTGGAAATATGGAACGTTTGTCGGTGCTTTATCTTGATGAGACTGCCATTGAGAAACTGCCTGTGTCAATTGAACGGCTGAGTGGCCTTGTGTCATTGAATCTGAGCAACTGCAAAAATCTTGTCTGTCTTCCGAGCACCATCAATAAATTGAAGTCTATTAGAAATCTTAATCTTTCTGGATGCTTGAAACTTGGCAAACATCAGGTAAATGTGGGGGAGATGGACTGTTTTGAGGAAAATGATGTGAATAGTGGGTCTGCAATAGAAATGTCATCTACCCATGATCTCATAAGATATGTGAGAGGTTCAATCTTTCATGGAGGCGAAGTAGTTTGGGGATCTTTAAGTAAGTTCCTGCATTCTGGATTGGTGCAAAAAGTGAATACAGAGCCAATGAGTTTCCGCTTGCCTATATCTGGTCTGTGTAATTTAACATATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAACGAATTTGGTTACTTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTTGTTCGTCTTCCTTCTGGCATTAGATTGCTTTCTAAGCTTGAGAACTTCAACTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCAGACCTTCCATCAAATAGTATACTAGATTTAAAGGGAATCTCTAATAAGAGGGAAACTTTTCATATGGTAATTCCAGGAAGTAATATTCCTGAGTGGTTCAGCCATCGGAGTGTTGGGTGTTCATTAAGTATGGGACCTGCATGCTTAGATGAAGTTTTGGGATTTGCTTTGTGTGCTGTTTTTGTACTCCATGAGCACCATCCAGTGGATAAGCTTTATATGGATGAATTCAAGACTTTTAATGCAACACATCATCTTGTATGTTGCCTGAAGTTCAATGGAATAGAATTGGAAGTATATGGCACACGGCCTGCATTTCGCTTTAGTGAAGAATTTTGTCAGTTTGAGTTCTTATTTGAAACCAGAGGGCCGGGTCTGAAGGTGAGGGAGTGTGGAGTATCTAGTGATAAGTACTTTGGTACAGAGAGGTGGAACTGTTGCGGTCAGTTTGAGTTCTTATTTGAAACCAGAGGGCCGGGTCTGAAGGTGAGGGAGTGTGGAGTCCGTCTGATATATGAGGAAGATGTGCAAGCGTTGAACCAAACAACCACTCAATCAAGCAGCAGGATGTCTCCTTATGAGGATATATTGATTGGTTTTGACATTCCAGTTGCAGGGGAAACCAGTGCCACTGGTAGCAGAACTTGCACGCTTGAAGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

855

Amino Acids

96.47

Weight (kDa)

6.02

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 80 5e-06 NB-ARC domain
WHD_ROQ1 PF23282 147 - 218 4.2e-25 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 316 - 334 2.2e-06 Leucine Rich Repeat
LRR_13 PF23286 407 - 491 1.2e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 418 - 487 1.8e-08 Leucine-rich repeat region
C-JID PF20160 658 - 811 4.2e-11 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2047
AccB7I CCANNNNNTGG 2 cut(s) 748, 2107
AccI GTMKAC 1 cut(s) 1921
AciI CCGC 3 cut(s) 186, 1684, 2343
AclI AACGTT 1 cut(s) 1294
AclWI GGATC 3 cut(s) 63, 507, 1627
AcsI RAATTY 9 cut(s) 220, 805, 928, 1003, 1114, 1266, 1766, 2129, 2234
AcuI CTGAAG 5 cut(s) 734, 895, 2192, 2300, 2405
AfaI GTAC 3 cut(s) 2088, 2315, 2323
AfiI CCNNNNNNNGG 5 cut(s) 545, 748, 1697, 2107, 2516
AjnI CCWGG 3 cut(s) 106, 664, 1975
AjuI GAANNNNNNNTTGG 2 cut(s) 1853, 1885
AluBI AGCT 5 cut(s) 532, 985, 1156, 1855, 2116
AluI AGCT 5 cut(s) 532, 985, 1156, 1855, 2116
Alw21I GWGCWC 2 cut(s) 1418, 2100
Alw26I GTCTC 9 cut(s) 657, 693, 816, 877, 1049, 1193, 1313, 1879, 2478
AlwI GGATC 3 cut(s) 63, 507, 1627
Ama87I CYCGRG 1 cut(s) 1190
AoxI GGCC 5 cut(s) 856, 1363, 2210, 2270, 2375
ApeKI GCWGC 1 cut(s) 2463
ApoI RAATTY 9 cut(s) 220, 805, 928, 1003, 1114, 1266, 1766, 2129, 2234
ArsI GACNNNNNNTTYG 2 cut(s) 1386, 1418
AseI ATTAAT 1 cut(s) 1235
Asp700I GAANNNNTTC 4 cut(s) 207, 639, 733, 1959
AspS9I GGNCC 5 cut(s) 104, 844, 2036, 2270, 2375
AsuC2I CCSGG 2 cut(s) 2274, 2379
AsuHPI GGTGA 4 cut(s) 1757, 1801, 2296, 2401
AsuNHI GCTAGC 1 cut(s) 182
AvaI CYCGRG 1 cut(s) 1190
AvaII GGWCC 3 cut(s) 104, 844, 2036
BauI CACGAG 1 cut(s) 314
BbsI GAAGAC 4 cut(s) 702, 815, 1400, 1817
Bbv12I GWGCWC 2 cut(s) 1418, 2100
BbvI GCAGC 1 cut(s) 2475
BccI CCATC 7 cut(s) 425, 1137, 1427, 1495, 1918, 2013, 2109
BceAI ACGGC 2 cut(s) 1370, 2225
BcgI CGANNNNNNTGC 2 cut(s) 1171, 1205
BciT130I CCWGG 3 cut(s) 108, 666, 1977
BciVI GTATCC 1 cut(s) 915
BcnI CCSGG 2 cut(s) 2274, 2379
BcoDI GTCTC 9 cut(s) 657, 693, 816, 877, 1049, 1193, 1313, 1879, 2478
BfaI CTAG 4 cut(s) 183, 533, 1925, 2304
BfuAI ACCTGC 1 cut(s) 2047
BfuI GTATCC 1 cut(s) 915
BglII AGATCT 1 cut(s) 569
BisI GCNGC 1 cut(s) 2464
BlsI GCNGC 1 cut(s) 2465
BmcAI AGTACT 1 cut(s) 2315
Bme1390I CCNGG 5 cut(s) 108, 666, 1977, 2274, 2379
Bme18I GGWCC 3 cut(s) 104, 844, 2036
BmeT110I CYCGRG 1 cut(s) 1190
BmgT120I GGNCC 5 cut(s) 104, 844, 2036, 2270, 2375
BmiI GGNNCC 1 cut(s) 2037
BmrFI CCNGG 5 cut(s) 108, 666, 1977, 2274, 2379
BmrI ACTGGG 2 cut(s) 909, 1267
BmsI GCATC 4 cut(s) 274, 411, 594, 1451
BmtI GCTAGC 1 cut(s) 186
BmuI ACTGGG 2 cut(s) 909, 1267
BpiI GAAGAC 4 cut(s) 702, 815, 1400, 1817
Bpu10I CCTNAGC 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 901, 1106, 1877
BpuMI CCSGG 2 cut(s) 2274, 2379
BsaBI GATNNNNATC 2 cut(s) 54, 498
BsaI GGTCTC 2 cut(s) 693, 1049
BsaJI CCNNGG 3 cut(s) 107, 742, 1138
BsaXI ACNNNNNCTCC 2 cut(s) 1593, 1623
Bsc4I CCNNNNNNNGG 5 cut(s) 545, 748, 1697, 2107, 2516
Bse1I ACTGG 7 cut(s) 101, 904, 1273, 2105, 2510, 2526, 2539
Bse8I GATNNNNATC 2 cut(s) 54, 498
BseBI CCWGG 3 cut(s) 108, 666, 1977
BseDI CCNNGG 3 cut(s) 107, 742, 1138
BseGI GGATG 5 cut(s) 1112, 1466, 2101, 2131, 2475
BseJI GATNNNNATC 2 cut(s) 54, 498
BseLI CCNNNNNNNGG 5 cut(s) 545, 748, 1697, 2107, 2516
BseMII CTCAG 4 cut(s) 1349, 1373, 1718, 1983
BseNI ACTGG 7 cut(s) 101, 904, 1273, 2105, 2510, 2526, 2539
BseRI GAGGAG 1 cut(s) 878
BseXI GCAGC 1 cut(s) 2475
BseYI CCCAGC 1 cut(s) 630
BshFI GGCC 5 cut(s) 858, 1365, 2212, 2272, 2377
BsiHKAI GWGCWC 2 cut(s) 1418, 2100
BsiHKCI CYCGRG 1 cut(s) 1190
BsiSI CCGG 2 cut(s) 2273, 2378
BslFI GGGAC 1 cut(s) 2049
BslI CCNNNNNNNGG 5 cut(s) 545, 748, 1697, 2107, 2516
BsmAI GTCTC 9 cut(s) 657, 693, 816, 877, 1049, 1193, 1313, 1879, 2478
BsmFI GGGAC 1 cut(s) 2049
BsmI GAATGC 1 cut(s) 1639
BsnI GGCC 5 cut(s) 858, 1365, 2212, 2272, 2377
Bso31I GGTCTC 2 cut(s) 693, 1049
BsoBI CYCGRG 1 cut(s) 1190
Bsp1286I GDGCHC 2 cut(s) 1418, 2100
Bsp143I GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
BspACI CCGC 3 cut(s) 186, 1684, 2343
BspANI GGCC 5 cut(s) 858, 1365, 2212, 2272, 2377
BspCNI CTCAG 4 cut(s) 1350, 1374, 1719, 1984
BspHI TCATGA 2 cut(s) 691, 1099
BspLI GGNNCC 1 cut(s) 2037
BspMI ACCTGC 1 cut(s) 2047
BspOI GCTAGC 1 cut(s) 186
BspPI GGATC 3 cut(s) 63, 507, 1627
BspTNI GGTCTC 2 cut(s) 693, 1049
BsrI ACTGG 7 cut(s) 101, 904, 1273, 2105, 2510, 2526, 2539
BssECI CCNNGG 3 cut(s) 107, 742, 1138
BssMI GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
BssNAI GTATAC 1 cut(s) 1922
BssSI CACGAG 1 cut(s) 314
BssT1I CCWWGG 2 cut(s) 742, 1138
Bst1107I GTATAC 1 cut(s) 1922
Bst2BI CACGAG 1 cut(s) 314
Bst2UI CCWGG 3 cut(s) 108, 666, 1977
Bst4CI ACNGT 5 cut(s) 197, 600, 651, 1508, 2339
Bst6I CTCTTC 1 cut(s) 710
BstAPI GCANNNNNTGC 2 cut(s) 613, 2547
BstC8I GCNNGC 9 cut(s) 184, 475, 530, 1072, 1688, 2044, 2214, 2433, 2552
BstDEI CTNAG 9 cut(s) 294, 818, 1358, 1382, 1727, 1802, 1851, 1992, 2047
BstEII GGTNACC 1 cut(s) 1789
BstF5I GGATG 5 cut(s) 1112, 1466, 2101, 2131, 2475
BstKTI GATC 6 cut(s) 58, 502, 572, 1099, 1567, 1622
BstMAI GTCTC 9 cut(s) 657, 693, 816, 877, 1049, 1193, 1313, 1879, 2478
BstMBI GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
BstMWI GCNNNNNNNGC 4 cut(s) 613, 1852, 2075, 2547
BstNI CCWGG 3 cut(s) 108, 666, 1977
BstNSI RCATGY 1 cut(s) 2046
BstPI GGTNACC 1 cut(s) 1789
BstSCI CCNGG 5 cut(s) 106, 664, 1975, 2272, 2377
BstV1I GCAGC 1 cut(s) 2475
BstV2I GAAGAC 4 cut(s) 702, 815, 1400, 1817
BstX2I RGATCY 2 cut(s) 569, 1619
BstXI CCANNNNNNTGG 1 cut(s) 1280
BstYI RGATCY 2 cut(s) 569, 1619
BstZ17I GTATAC 1 cut(s) 1922
BsuI GTATCC 1 cut(s) 915
BsuRI GGCC 5 cut(s) 858, 1365, 2212, 2272, 2377
BtsCI GGATG 5 cut(s) 1112, 1466, 2101, 2131, 2475
BtsIMutI CAGTG 4 cut(s) 348, 2112, 2532, 2533
BveI ACCTGC 1 cut(s) 2047
Cac8I GCNNGC 9 cut(s) 184, 475, 530, 1072, 1688, 2044, 2214, 2433, 2552
CciI TCATGA 2 cut(s) 691, 1099
Cfr13I GGNCC 5 cut(s) 104, 844, 2036, 2270, 2375
CseI GACGC 1 cut(s) 176
Csp6I GTAC 3 cut(s) 2087, 2314, 2322
CviAII CATG 9 cut(s) 158, 608, 692, 748, 1100, 1562, 1598, 2043, 2093
CviQI GTAC 3 cut(s) 2087, 2314, 2322
DdeI CTNAG 9 cut(s) 294, 818, 1358, 1382, 1727, 1802, 1851, 1992, 2047
DpnI GATC 6 cut(s) 57, 501, 571, 1098, 1566, 1621
DpnII GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
DraI TTTAAA 1 cut(s) 1932
Eam1104I CTCTTC 1 cut(s) 710
EarI CTCTTC 1 cut(s) 710
Eco130I CCWWGG 2 cut(s) 742, 1138
Eco147I AGGCCT 1 cut(s) 858
Eco31I GGTCTC 2 cut(s) 693, 1049
Eco32I GATATC 1 cut(s) 917
Eco47I GGWCC 3 cut(s) 104, 844, 2036
Eco57I CTGAAG 5 cut(s) 734, 895, 2192, 2300, 2405
Eco88I CYCGRG 1 cut(s) 1190
Eco91I GGTNACC 1 cut(s) 1789
EcoO109I RGGNCCY 1 cut(s) 2036
EcoO65I GGTNACC 1 cut(s) 1789
EcoRI GAATTC 1 cut(s) 2129
EcoRII CCWGG 3 cut(s) 106, 664, 1975
EcoRV GATATC 1 cut(s) 917
EcoT14I CCWWGG 2 cut(s) 742, 1138
EcoT22I ATGCAT 1 cut(s) 609
ErhI CCWWGG 2 cut(s) 742, 1138
FaeI CATG 9 cut(s) 161, 611, 695, 751, 1103, 1565, 1601, 2046, 2096
FaqI GGGAC 1 cut(s) 2049
FatI CATG 9 cut(s) 157, 607, 691, 747, 1099, 1561, 1597, 2042, 2092
FauI CCCGC 1 cut(s) 179
FauNDI CATATG 1 cut(s) 1965
FblI GTMKAC 1 cut(s) 1921
Fnu4HI GCNGC 1 cut(s) 2464
FokI GGATG 5 cut(s) 1119, 1473, 2088, 2138, 2482
Fsp4HI GCNGC 1 cut(s) 2464
FspBI CTAG 4 cut(s) 183, 533, 1925, 2304
GluI GCNGC 1 cut(s) 2464
GsaI CCCAGC 1 cut(s) 634
HaeIII GGCC 5 cut(s) 858, 1365, 2212, 2272, 2377
HapII CCGG 2 cut(s) 2273, 2378
HgaI GACGC 1 cut(s) 176
Hin1II CATG 9 cut(s) 161, 611, 695, 751, 1103, 1565, 1601, 2046, 2096
HincII GTYRAC 3 cut(s) 63, 166, 762
HindII GTYRAC 3 cut(s) 63, 166, 762
HindIII AAGCTT 3 cut(s) 1154, 1853, 2114
HpaII CCGG 2 cut(s) 2273, 2378
HphI GGTGA 4 cut(s) 1757, 1801, 2296, 2401
Hpy166II GTNNAC 6 cut(s) 63, 166, 647, 762, 844, 1922
Hpy8I GTNNAC 6 cut(s) 63, 166, 647, 762, 844, 1922
HpyCH4III ACNGT 5 cut(s) 197, 600, 651, 1508, 2339
HpyCH4IV ACGT 2 cut(s) 673, 1294
HpyF10VI GCNNNNNNNGC 4 cut(s) 613, 1852, 2075, 2547
HpyF3I CTNAG 9 cut(s) 294, 818, 1358, 1382, 1727, 1802, 1851, 1992, 2047
HpySE526I ACGT 2 cut(s) 673, 1294
Hsp92II CATG 9 cut(s) 161, 611, 695, 751, 1103, 1565, 1601, 2046, 2096
Kzo9I GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
LmnI GCTCC 1 cut(s) 1751
Lsp1109I GCAGC 1 cut(s) 2475
LweI GCATC 4 cut(s) 274, 411, 594, 1451
MaeI CTAG 4 cut(s) 183, 533, 1925, 2304
MaeII ACGT 2 cut(s) 673, 1294
MaeIII GTNAC 3 cut(s) 505, 1772, 1789
MalI GATC 6 cut(s) 57, 501, 571, 1098, 1566, 1621
MboI GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
MboII GAAGA 8 cut(s) 266, 707, 727, 815, 1400, 1817, 2243, 2435
MfeI CAATTG 1 cut(s) 1347
MflI RGATCY 2 cut(s) 569, 1619
MhlI GDGCHC 2 cut(s) 1418, 2100
MlyI GAGTC 4 cut(s) 879, 1134, 1204, 2412
MmeI TCCRAC 2 cut(s) 612, 1261
Mph1103I ATGCAT 1 cut(s) 609
MroXI GAANNNNTTC 4 cut(s) 207, 639, 733, 1959
MslI CAYNNNNRTG 3 cut(s) 410, 752, 2010
MspI CCGG 2 cut(s) 2273, 2378
MspR9I CCNGG 5 cut(s) 108, 666, 1977, 2274, 2379
MunI CAATTG 1 cut(s) 1347
Mva1269I GAATGC 1 cut(s) 1639
MvaI CCWGG 3 cut(s) 108, 666, 1977
MwoI GCNNNNNNNGC 4 cut(s) 613, 1852, 2075, 2547
NciI CCSGG 2 cut(s) 2274, 2379
NdeI CATATG 1 cut(s) 1965
NdeII GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
NheI GCTAGC 1 cut(s) 182
NlaIII CATG 9 cut(s) 161, 611, 695, 751, 1103, 1565, 1601, 2046, 2096
NlaIV GGNNCC 1 cut(s) 2037
NmuCI GTSAC 1 cut(s) 1789
NsiI ATGCAT 1 cut(s) 609
NspI RCATGY 1 cut(s) 2046
PaeI GCATGC 1 cut(s) 2046
PaeR7I CTCGAG 1 cut(s) 1190
PagI TCATGA 2 cut(s) 691, 1099
PceI AGGCCT 1 cut(s) 858
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 1639
PdmI GAANNNNTTC 4 cut(s) 207, 639, 733, 1959
PfeI GAWTC 7 cut(s) 734, 1081, 1168, 1220, 1378, 1798, 1938
PflFI GACNNNGTC 1 cut(s) 539
PflMI CCANNNNNTGG 2 cut(s) 748, 2107
PfoI TCCNGGA 1 cut(s) 1975
PkrI GCNGC 1 cut(s) 2465
PleI GAGTC 4 cut(s) 879, 1133, 1203, 2411
PpsI GAGTC 4 cut(s) 879, 1133, 1203, 2411
PpuMI RGGWCCY 1 cut(s) 2036
PshBI ATTAAT 1 cut(s) 1235
Psp1406I AACGTT 1 cut(s) 1294
Psp5II RGGWCCY 1 cut(s) 2036
Psp6I CCWGG 3 cut(s) 106, 664, 1975
PspEI GGTNACC 1 cut(s) 1789
PspFI CCCAGC 1 cut(s) 630
PspGI CCWGG 3 cut(s) 106, 664, 1975
PspN4I GGNNCC 1 cut(s) 2037
PspPI GGNCC 5 cut(s) 104, 844, 2036, 2270, 2375
PspPPI RGGWCCY 1 cut(s) 2036
PsuI RGATCY 2 cut(s) 569, 1619
PsyI GACNNNGTC 1 cut(s) 539
RsaI GTAC 3 cut(s) 2088, 2315, 2323
RsaNI GTAC 3 cut(s) 2087, 2314, 2322
RseI CAYNNNNRTG 3 cut(s) 410, 752, 2010
SatI GCNGC 1 cut(s) 2464
Sau3AI GATC 6 cut(s) 55, 499, 569, 1096, 1564, 1619
Sau96I GGNCC 5 cut(s) 104, 844, 2036, 2270, 2375
ScaI AGTACT 1 cut(s) 2315
SchI GAGTC 4 cut(s) 879, 1134, 1204, 2412
ScrFI CCNGG 5 cut(s) 108, 666, 1977, 2274, 2379
SduI GDGCHC 2 cut(s) 1418, 2100
SfaNI GCATC 4 cut(s) 274, 411, 594, 1451
Sfr274I CTCGAG 1 cut(s) 1190
SinI GGWCC 3 cut(s) 104, 844, 2036
SlaI CTCGAG 1 cut(s) 1190
SmiMI CAYNNNNRTG 3 cut(s) 410, 752, 2010
SmlI CTYRAG 4 cut(s) 880, 1085, 1190, 1856
SmoI CTYRAG 4 cut(s) 880, 1085, 1190, 1856
SphI GCATGC 1 cut(s) 2046
SseBI AGGCCT 1 cut(s) 858
SsiI CCGC 3 cut(s) 186, 1684, 2343
SspI AATATT 2 cut(s) 459, 1987
SspMI CTAG 4 cut(s) 183, 533, 1925, 2304
StuI AGGCCT 1 cut(s) 858
StyD4I CCNGG 5 cut(s) 106, 664, 1975, 2272, 2377
StyI CCWWGG 2 cut(s) 742, 1138
TaaI ACNGT 5 cut(s) 197, 600, 651, 1508, 2339
TaiI ACGT 2 cut(s) 676, 1297
TaqI TCGA 4 cut(s) 502, 602, 891, 1191
TatI WGTACW 2 cut(s) 2086, 2313
TfiI GAWTC 7 cut(s) 734, 1081, 1168, 1220, 1378, 1798, 1938
TscAI CASTG 4 cut(s) 355, 2112, 2533, 2539
TseFI GTSAC 1 cut(s) 1789
TseI GCWGC 1 cut(s) 2463
Tsp45I GTSAC 1 cut(s) 1789
TspGWI ACGGA 2 cut(s) 294, 2396
TspRI CASTG 4 cut(s) 355, 2112, 2533, 2539
Tth111I GACNNNGTC 1 cut(s) 539
Van91I CCANNNNNTGG 2 cut(s) 748, 2107
VpaK11BI GGWCC 3 cut(s) 104, 844, 2036
VspI ATTAAT 1 cut(s) 1235
XapI RAATTY 9 cut(s) 220, 805, 928, 1003, 1114, 1266, 1766, 2129, 2234
XceI RCATGY 1 cut(s) 2046
XcmI CCANNNNNNNNNTGG 2 cut(s) 1136, 2012
XhoI CTCGAG 1 cut(s) 1190
XmiI GTMKAC 1 cut(s) 1921
XmnI GAANNNNTTC 4 cut(s) 207, 639, 733, 1959
XspI CTAG 4 cut(s) 183, 533, 1925, 2304
ZrmI AGTACT 1 cut(s) 2315
Zsp2I ATGCAT 1 cut(s) 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.