Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g05120 |
| rosa_chinensis | RchiOBHm_Chr1g0324611 RchiOBHm_Chr5g0014651 RchiOBHm_Chr5g0014741 |
| rosa_laevigata | RLG00000030187 RLG00000032136 RLG00000032137 |
| rosa_multiflora | Rmu_sc0003893.1_g000002 Rmu_sc0003893.1_g000003 Rmu_sc0003893.1_g000007 Rmu_sc0013610.1_g000012 |
| rosa_roxburghii | Rroxscaffold_159G00432980 Rroxscaffold_159G00432990 Rroxscaffold_1G00061790 Rroxscaffold_4G00325310 Rroxscaffold_4G00325330 |
| rosa_rugosa | Rorug01G0047100.1 Rorug01G0047300 Rorug05G0020400 Rorug05G0020500 |
| rosa_samantha | Rh1AG062700 Rh1AG062900 Rh1BG053100 Rh1CG064800 Rh1DG068900 Rh1DG069800 Rh5AG115900 Rh5BG112300 Rh5BG112800 Rh5CG124400 Rh7BG358300 |
| rosa_wichuraiana | Rw1G005330 Rw5G009990 Rw5G010000 Rw5G010010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 14, 26 |
| AclWI | GGATC | 1 cut(s) | 396 |
| AfaI | GTAC | 1 cut(s) | 21 |
| AgsI | TTSAA | 2 cut(s) | 155, 452 |
| AjnI | CCWGG | 1 cut(s) | 200 |
| AluBI | AGCT | 6 cut(s) | 36, 193, 226, 424, 433, 557 |
| AluI | AGCT | 6 cut(s) | 36, 193, 226, 424, 433, 557 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AlwI | GGATC | 1 cut(s) | 396 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 386 |
| ApeKI | GCWGC | 4 cut(s) | 28, 36, 503, 554 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| BbvCI | CCTCAGC | 1 cut(s) | 227 |
| BbvI | GCAGC | 3 cut(s) | 23, 40, 490 |
| BccI | CCATC | 3 cut(s) | 326, 365, 493 |
| BciT130I | CCWGG | 1 cut(s) | 202 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfmI | CTRYAG | 2 cut(s) | 531, 552 |
| BisI | GCNGC | 5 cut(s) | 14, 29, 37, 504, 555 |
| BlsI | GCNGC | 5 cut(s) | 15, 30, 38, 505, 556 |
| Bme1390I | CCNGG | 1 cut(s) | 202 |
| BmrFI | CCNGG | 1 cut(s) | 202 |
| BmsI | GCATC | 5 cut(s) | 48, 60, 241, 404, 466 |
| BpmI | CTGGAG | 1 cut(s) | 419 |
| Bpu10I | CCTNAGC | 2 cut(s) | 222, 227 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| BsaBI | GATNNNNATC | 1 cut(s) | 74 |
| BsaJI | CCNNGG | 1 cut(s) | 201 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 529, 559 |
| Bse8I | GATNNNNATC | 1 cut(s) | 74 |
| BseBI | CCWGG | 1 cut(s) | 202 |
| BseDI | CCNNGG | 1 cut(s) | 201 |
| BseGI | GGATG | 4 cut(s) | 75, 232, 395, 499 |
| BseJI | GATNNNNATC | 1 cut(s) | 74 |
| BseMII | CTCAG | 3 cut(s) | 213, 218, 378 |
| BseRI | GAGGAG | 2 cut(s) | 534, 537 |
| BseXI | GCAGC | 3 cut(s) | 23, 40, 490 |
| BslFI | GGGAC | 1 cut(s) | 495 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BsmFI | GGGAC | 1 cut(s) | 495 |
| Bsp143I | GATC | 2 cut(s) | 64, 401 |
| BspACI | CCGC | 2 cut(s) | 14, 26 |
| BspCNI | CTCAG | 3 cut(s) | 214, 219, 379 |
| BspMAI | CTGCAG | 2 cut(s) | 535, 556 |
| BspPI | GGATC | 1 cut(s) | 396 |
| BspQI | GCTCTTC | 1 cut(s) | 183 |
| BssECI | CCNNGG | 1 cut(s) | 201 |
| BssMI | GATC | 2 cut(s) | 64, 401 |
| Bst2UI | CCWGG | 1 cut(s) | 202 |
| Bst4CI | ACNGT | 2 cut(s) | 100, 176 |
| Bst6I | CTCTTC | 1 cut(s) | 183 |
| BstC8I | GCNNGC | 1 cut(s) | 535 |
| BstDEI | CTNAG | 5 cut(s) | 53, 105, 222, 227, 387 |
| BstF5I | GGATG | 4 cut(s) | 75, 232, 395, 499 |
| BstKTI | GATC | 2 cut(s) | 67, 404 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 2 cut(s) | 64, 401 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 430 |
| BstNI | CCWGG | 1 cut(s) | 202 |
| BstSCI | CCNGG | 1 cut(s) | 200 |
| BstSFI | CTRYAG | 2 cut(s) | 531, 552 |
| BstV1I | GCAGC | 3 cut(s) | 23, 40, 490 |
| BstX2I | RGATCY | 1 cut(s) | 401 |
| BstYI | RGATCY | 1 cut(s) | 401 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsCI | GGATG | 4 cut(s) | 75, 232, 395, 499 |
| BtsI | GCAGTG | 2 cut(s) | 213, 359 |
| BtsIMutI | CAGTG | 3 cut(s) | 105, 213, 359 |
| Cac8I | GCNNGC | 1 cut(s) | 535 |
| CaiI | CAGNNNCTG | 1 cut(s) | 386 |
| Csp6I | GTAC | 1 cut(s) | 20 |
| CviAII | CATG | 1 cut(s) | 445 |
| CviQI | GTAC | 1 cut(s) | 20 |
| DdeI | CTNAG | 5 cut(s) | 53, 105, 222, 227, 387 |
| DpnI | GATC | 2 cut(s) | 66, 403 |
| DpnII | GATC | 2 cut(s) | 64, 401 |
| Eam1104I | CTCTTC | 1 cut(s) | 183 |
| EarI | CTCTTC | 1 cut(s) | 183 |
| Eco32I | GATATC | 1 cut(s) | 527 |
| EcoRII | CCWGG | 1 cut(s) | 200 |
| EcoRV | GATATC | 1 cut(s) | 527 |
| FaeI | CATG | 1 cut(s) | 448 |
| FaiI | YATR | 4 cut(s) | 33, 255, 327, 446 |
| FaqI | GGGAC | 1 cut(s) | 495 |
| FatI | CATG | 1 cut(s) | 444 |
| FauI | CCCGC | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 5 cut(s) | 14, 29, 37, 504, 555 |
| FokI | GGATG | 4 cut(s) | 82, 219, 382, 506 |
| Fsp4HI | GCNGC | 5 cut(s) | 14, 29, 37, 504, 555 |
| GluI | GCNGC | 5 cut(s) | 14, 29, 37, 504, 555 |
| GsuI | CTGGAG | 1 cut(s) | 419 |
| Hin1II | CATG | 1 cut(s) | 448 |
| HinfI | GANTC | 1 cut(s) | 336 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy188I | TCNGA | 2 cut(s) | 69, 198 |
| Hpy188III | TCNNGA | 5 cut(s) | 8, 399, 436, 461, 516 |
| HpyAV | CCTTC | 3 cut(s) | 80, 116, 355 |
| HpyCH4III | ACNGT | 2 cut(s) | 100, 176 |
| HpyCH4V | TGCA | 5 cut(s) | 39, 395, 506, 533, 554 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 430 |
| HpyF3I | CTNAG | 5 cut(s) | 53, 105, 222, 227, 387 |
| Hsp92II | CATG | 1 cut(s) | 448 |
| Kzo9I | GATC | 2 cut(s) | 64, 401 |
| LguI | GCTCTTC | 1 cut(s) | 183 |
| LmnI | GCTCC | 1 cut(s) | 438 |
| Lsp1109I | GCAGC | 3 cut(s) | 23, 40, 490 |
| LweI | GCATC | 5 cut(s) | 48, 60, 241, 404, 466 |
| MaeIII | GTNAC | 2 cut(s) | 100, 440 |
| MalI | GATC | 2 cut(s) | 66, 403 |
| MboI | GATC | 2 cut(s) | 64, 401 |
| MboII | GAAGA | 2 cut(s) | 34, 200 |
| MflI | RGATCY | 1 cut(s) | 401 |
| MluCI | AATT | 2 cut(s) | 60, 93 |
| MnlI | CCTC | 6 cut(s) | 137, 222, 292, 382, 555, 558 |
| MroXI | GAANNNNTTC | 1 cut(s) | 192 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| MspA1I | CMGCKG | 1 cut(s) | 16 |
| MspR9I | CCNGG | 1 cut(s) | 202 |
| MvaI | CCWGG | 1 cut(s) | 202 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 430 |
| NdeII | GATC | 2 cut(s) | 64, 401 |
| NlaIII | CATG | 1 cut(s) | 448 |
| NmuCI | GTSAC | 2 cut(s) | 100, 440 |
| PciSI | GCTCTTC | 1 cut(s) | 183 |
| PdmI | GAANNNNTTC | 1 cut(s) | 192 |
| PfeI | GAWTC | 1 cut(s) | 336 |
| PkrI | GCNGC | 5 cut(s) | 15, 30, 38, 505, 556 |
| Psp6I | CCWGG | 1 cut(s) | 200 |
| PspGI | CCWGG | 1 cut(s) | 200 |
| PstI | CTGCAG | 2 cut(s) | 535, 556 |
| PstNI | CAGNNNCTG | 1 cut(s) | 386 |
| PsuI | RGATCY | 1 cut(s) | 401 |
| RsaI | GTAC | 1 cut(s) | 21 |
| RsaNI | GTAC | 1 cut(s) | 20 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SapI | GCTCTTC | 1 cut(s) | 183 |
| SatI | GCNGC | 5 cut(s) | 14, 29, 37, 504, 555 |
| Sau3AI | GATC | 2 cut(s) | 64, 401 |
| SbfI | CCTGCAGG | 1 cut(s) | 535 |
| ScrFI | CCNGG | 1 cut(s) | 202 |
| SdaI | CCTGCAGG | 1 cut(s) | 535 |
| SetI | ASST | 8 cut(s) | 38, 91, 195, 203, 228, 426, 435, 559 |
| SfaNI | GCATC | 5 cut(s) | 48, 60, 241, 404, 466 |
| SfcI | CTRYAG | 2 cut(s) | 531, 552 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 535 |
| Sse9I | AATT | 2 cut(s) | 60, 93 |
| SsiI | CCGC | 2 cut(s) | 14, 26 |
| StyD4I | CCNGG | 1 cut(s) | 200 |
| TaaI | ACNGT | 2 cut(s) | 100, 176 |
| TasI | AATT | 2 cut(s) | 60, 93 |
| TauI | GCSGC | 1 cut(s) | 16 |
| TfiI | GAWTC | 1 cut(s) | 336 |
| TscAI | CASTG | 3 cut(s) | 105, 220, 359 |
| TseFI | GTSAC | 2 cut(s) | 100, 440 |
| TseI | GCWGC | 4 cut(s) | 28, 36, 503, 554 |
| Tsp45I | GTSAC | 2 cut(s) | 100, 440 |
| TspDTI | ATGAA | 2 cut(s) | 135, 480 |
| TspGWI | ACGGA | 2 cut(s) | 152, 499 |
| TspRI | CASTG | 3 cut(s) | 105, 220, 359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 192 |