Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0003689

Physical Location & Seq

Genomic Coordinates Reverse (-)

12167693 .. 12193921

Gene Structure 26229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG068900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGTCAGATCACCAAGTCAAGAGCGTTGTCGTAAGCGTTGCATCACAACCAGGATCCAGTTCCGAAGGTACGGACGGGCAACGCTCAGATATTCGGACTCTAATTAAGAAATCATTGTCAACAGATACAACTTCAATTAAGATTGCATTGTTAGCAGTATTGGTAGCACTTAAATATTCCCTTGCAGATATATGGGTACCATTGGGACGTCATGTTTGGGGGGCAATTGTAGGTAAAATCGAGGTGAATCTTAGTATGCGACAACGGAGGGAACTACTAGTGACATTAGTTCCCCATATGGTTCTCTGTTTGACCATGACATTTCTTCTGCCCATCAGTTTTCTGCAGAAACTGATATTAATAACAGGGAATTTTCTACCCAATACGCGGGAAAGGATACTACTTGCAATATCTTGTATTGGGTTGTTAGTGGATCCTTTGTTCTTTTACATTCCATTCATCGATGAGAAAAGAAAGTGTATTGGAATGGACAAGAAGTTAAGGGATGTAGTTCTTGCATTGCGATCACTTACAGATCTCGCTTTCGCACTCCATATTGAAGCTCAGATTCGTGATCTGACTGACGTGCCCTCCGACCCCTTCGACTTTGAGTATGAGGATATCGTGTATAGGGGTTTAAAGTGGATATCTCAAGATATTATAATCGAGGTCCTTCCTATTCTTCCCATCCAACAGGTCATACTAGTAGCTATATTTTTCAGAATGAATGATTCTGGATATCTAAATGAAGCAGCAACTGGCAACGTTTTTCTTACTTTGCAATTAATTGCAAGGGGTTGCCAAATCTACCACTTCTGGAAGCCATTTAAAAGGGTTGGAAAATGGGCCATAAGTGCATTCTTTATCCTCATGTACATCTTGGTTGGCCATACATATATTCTGTGGGAAACTCAACAAGCATTGGACAATGAGAAGGAGAAAATTAAATCCAAATTTGAAGCTCTAGGTACATGGATGGTAAGAAATGGTATCCCTGAAGAAGTGAAGACCGAAGCAGTGAAAATCATAACAGAAAAGGAAGTAGTGGAGAAAAACTACGATGCTGATGTGGACTTGCTTTTTGTTTTCAATGCCCTTACTGGGGATGAAAACATGCGTATCAGGAGTGTTTTGAAGAGGCATTTGTGCCTAAATGCCCTACAGAAAGTATCCATCCTTGATCATGTTCTTCAAGCAGTAGTGATTAATGCTCTCGAGCCAGTAGTCTACAAGGAGAATAGCTGCGTGGTTCAAGCAGGAAAGTCAATTGATAGAATGCTCATCATCACAGAAGGCGTAATTTTCTGTACAGACAACACCAGATCTAATGTTGCACCTGAAGCAGGTACCTCATCCACAATGAAAATCCGTAAACCACGTTTTGAGAAAGGTGAAGTTTATGGAGAAGAGGTTCTGACTATCGGCGAGAACGACCCTTTTCCTACATCAGCCCGAGATGTCAAGTGCGAAAGAAAAGTAGAAGCCTTCGCTCTCGCATGCAGAGGTTTTCCTAACTTCAAATACGTATCCGACATGATGCGGCGGCGTAAGTCCCCAGATGGATCGAATGATCCGGAGCTAGTATACAAGGCATATGGGGAGCTGACAACTACAAGATCAGAGAAGTTAAAGCAAAAACAGATGAAGATACTTGAGTGGCTGTCAAGAAACGTCCGGGACGAAGATCTGAAGACATTGGTCATGGAACACATGAAGGCTAGTAACGTACTGGAAAAGAACTTTGATGCTGAGGTGGATGTCAAGTATCTGTTCTCTGTTGGTCTTTCCTGGGATATCGAATATCGTATAAAGAAGCAGATCTGCATCAATTCTCTGAGTAAGCTTATCCAGCTCCAGAGTGACATGGTTCAACAGCATCGTGATGAAATGGCTAATCTGGGACGGAGATTGGATGAGATGGCTGCATTTTTATCCAGAATGGGATATCCTGCAGGCACATCTCCTCCTCCTGCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

659

Amino Acids

74.87

Weight (kDa)

8.16

Isoelectric Point (pI)

37.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003689)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g05120
rosa_chinensis	RchiOBHm_Chr1g0324611 RchiOBHm_Chr5g0014651 RchiOBHm_Chr5g0014741
rosa_laevigata	RLG00000030187 RLG00000032136 RLG00000032137
rosa_multiflora	Rmu_sc0003893.1_g000002 Rmu_sc0003893.1_g000003 Rmu_sc0003893.1_g000007 Rmu_sc0013610.1_g000012
rosa_roxburghii	Rroxscaffold_159G00432980 Rroxscaffold_159G00432990 Rroxscaffold_1G00061790 Rroxscaffold_4G00325310 Rroxscaffold_4G00325330
rosa_rugosa	Rorug01G0047100.1 Rorug01G0047300 Rorug05G0020400 Rorug05G0020500
rosa_samantha	Rh1AG062700 Rh1AG062900 Rh1BG053100 Rh1CG064800 Rh1DG068900 Rh1DG069800 Rh5AG115900 Rh5BG112300 Rh5BG112800 Rh5CG124400 Rh7BG358300
rosa_wichuraiana	Rw1G005330 Rw5G009990 Rw5G010000 Rw5G010010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	662
AatII	GACGTC	1 cut(s)	211
Acc36I	ACCTGC	1 cut(s)	1334
Acc65I	GGTACC	2 cut(s)	196, 1346
AccB1I	GGYRCC	2 cut(s)	196, 1346
AccI	GTMKAC	2 cut(s)	1227, 1584
AccII	CGCG	1 cut(s)	388
AccIII	TCCGGA	1 cut(s)	1573
AciI	CCGC	3 cut(s)	388, 1540, 1543
AclI	AACGTT	1 cut(s)	765
AclWI	GGATC	6 cut(s)	48, 61, 428, 441, 1565, 1570
AcoI	YGGCCR	1 cut(s)	886
AcsI	RAATTY	2 cut(s)	370, 953
AcuI	CTGAAG	3 cut(s)	1017, 1359, 1709
AcyI	GRCGYC	1 cut(s)	208
AfaI	GTAC	7 cut(s)	70, 198, 875, 970, 1309, 1348, 1728
AfiI	CCNNNNNNNGG	4 cut(s)	387, 1101, 1102, 1343
AgsI	TTSAA	9 cut(s)	135, 560, 959, 1090, 1135, 1193, 1253, 1519, 1871
AhlI	ACTAGT	2 cut(s)	277, 703
AjiI	CACGTC	1 cut(s)	586
AjnI	CCWGG	2 cut(s)	49, 1787
AloI	GAACNNNNNNTCC	4 cut(s)	425, 457, 1395, 1427
AluBI	AGCT	9 cut(s)	563, 710, 962, 1242, 1579, 1603, 1843, 1852, 1976
AluI	AGCT	9 cut(s)	563, 710, 962, 1242, 1579, 1603, 1843, 1852, 1976
AlwI	GGATC	6 cut(s)	48, 61, 428, 441, 1565, 1570
AlwNI	CAGNNNCTG	2 cut(s)	352, 758
Ama87I	CYCGRG	2 cut(s)	1214, 1452
Aor13HI	TCCGGA	1 cut(s)	1573
AoxI	GGCC	2 cut(s)	846, 886
ApeKI	GCWGC	4 cut(s)	752, 1242, 1922, 1973
ApoI	RAATTY	2 cut(s)	370, 953
ArsI	GACNNNNNNTTYG	4 cut(s)	198, 230, 1064, 1096
AseI	ATTAAT	3 cut(s)	359, 785, 1206
Asp700I	GAANNNNTTC	1 cut(s)	1410
Asp718I	GGTACC	2 cut(s)	196, 1346
AspS9I	GGNCC	2 cut(s)	670, 846
AsuC2I	CCSGG	1 cut(s)	1676
AsuHPI	GGTGA	2 cut(s)	256, 1403
AvaI	CYCGRG	2 cut(s)	1214, 1452
AvaII	GGWCC	1 cut(s)	670
BaeGI	GKGCMC	1 cut(s)	591
BaeI	ACNNNNGTAYC	4 cut(s)	1102, 1135, 1640, 1673
BalI	TGGCCA	1 cut(s)	888
BamHI	GGATCC	2 cut(s)	53, 433
BanI	GGYRCC	2 cut(s)	196, 1346
BbsI	GAAGAC	2 cut(s)	1013, 1697
BbvCI	CCTCAGC	1 cut(s)	1749
BbvI	GCAGC	3 cut(s)	764, 1229, 1909
BccI	CCATC	6 cut(s)	341, 695, 970, 1181, 1553, 1912
BciT130I	CCWGG	2 cut(s)	51, 1789
BciVI	GTATCC	4 cut(s)	390, 1001, 1180, 1537
BclI	TGATCA	1 cut(s)	1180
BcnI	CCSGG	1 cut(s)	1676
BcuI	ACTAGT	2 cut(s)	277, 703
BfaI	CTAG	5 cut(s)	278, 704, 965, 1580, 1719
BfmI	CTRYAG	4 cut(s)	344, 1160, 1950, 1971
BfuAI	ACCTGC	1 cut(s)	1334
BfuI	GTATCC	4 cut(s)	390, 1001, 1180, 1537
BglII	AGATCT	4 cut(s)	535, 1322, 1684, 1818
BisI	GCNGC	6 cut(s)	753, 1243, 1541, 1544, 1923, 1974
BlsI	GCNGC	6 cut(s)	754, 1244, 1542, 1545, 1924, 1975
Bme1390I	CCNGG	3 cut(s)	51, 1676, 1789
Bme18I	GGWCC	1 cut(s)	670
BmeT110I	CYCGRG	2 cut(s)	1214, 1452
BmgBI	CACGTC	1 cut(s)	586
BmgT120I	GGNCC	2 cut(s)	670, 846
BmiI	GGNNCC	4 cut(s)	55, 198, 435, 1348
BmrFI	CCNGG	3 cut(s)	51, 1676, 1789
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	6 cut(s)	50, 1051, 1527, 1735, 1833, 1885
BmuI	ACTGGG	1 cut(s)	1110
BoxI	GACNNNNGTC	1 cut(s)	1697
BpiI	GAAGAC	2 cut(s)	1013, 1697
BpmI	CTGGAG	1 cut(s)	1838
Bpu10I	CCTNAGC	1 cut(s)	1749
BpuEI	CTTGAG	2 cut(s)	636, 1673
BpuMI	CCSGG	1 cut(s)	1676
Bsa29I	ATCGAT	1 cut(s)	462
BsaAI	YACGTR	1 cut(s)	1525
BsaBI	GATNNNNATC	1 cut(s)	1823
BsaHI	GRCGYC	1 cut(s)	208
BsaJI	CCNNGG	1 cut(s)	1788
BsaWI	WCCGGW	1 cut(s)	1573
BsaXI	ACNNNNNCTCC	6 cut(s)	575, 605, 1395, 1425, 1948, 1978
Bsc4I	CCNNNNNNNGG	4 cut(s)	387, 1101, 1102, 1343
Bse1I	ACTGG	5 cut(s)	57, 763, 1105, 1220, 1734
Bse3DI	GCAATG	1 cut(s)	518
Bse8I	GATNNNNATC	1 cut(s)	1823
BseAI	TCCGGA	1 cut(s)	1573
BseBI	CCWGG	2 cut(s)	51, 1789
BseCI	ATCGAT	1 cut(s)	462
BseDI	CCNNGG	1 cut(s)	1788
BseGI	GGATG	8 cut(s)	511, 687, 981, 1111, 1173, 1352, 1762, 1918
BseJI	GATNNNNATC	1 cut(s)	1823
BseLI	CCNNNNNNNGG	4 cut(s)	387, 1101, 1102, 1343
BseMI	GCAATG	1 cut(s)	518
BseMII	CTCAG	4 cut(s)	99, 578, 1740, 1826
BseNI	ACTGG	5 cut(s)	57, 763, 1105, 1220, 1734
BseRI	GAGGAG	2 cut(s)	1953, 1956
BseSI	GKGCMC	1 cut(s)	591
BseXI	GCAGC	3 cut(s)	764, 1229, 1909
Bsh1236I	CGCG	1 cut(s)	388
BshFI	GGCC	2 cut(s)	848, 888
BshNI	GGYRCC	2 cut(s)	196, 1346
BshVI	ATCGAT	1 cut(s)	462
BsiHKCI	CYCGRG	2 cut(s)	1214, 1452
BsiSI	CCGG	2 cut(s)	1574, 1675
BslFI	GGGAC	4 cut(s)	219, 1537, 1691, 1914
BslI	CCNNNNNNNGG	4 cut(s)	387, 1101, 1102, 1343
BsmFI	GGGAC	4 cut(s)	219, 1537, 1691, 1914
BsmI	GAATGC	2 cut(s)	857, 1281
BsnI	GGCC	2 cut(s)	848, 888
BsoBI	CYCGRG	2 cut(s)	1214, 1452
Bsp1286I	GDGCHC	1 cut(s)	591
Bsp13I	TCCGGA	1 cut(s)	1573
Bsp1407I	TGTACA	2 cut(s)	873, 1307
BspACI	CCGC	3 cut(s)	388, 1540, 1543
BspANI	GGCC	2 cut(s)	848, 888
BspCNI	CTCAG	4 cut(s)	98, 577, 1741, 1827
BspDI	ATCGAT	1 cut(s)	462
BspEI	TCCGGA	1 cut(s)	1573
BspFNI	CGCG	1 cut(s)	388
BspLI	GGNNCC	4 cut(s)	55, 198, 435, 1348
BspMAI	CTGCAG	3 cut(s)	348, 1954, 1975
BspMI	ACCTGC	1 cut(s)	1334
BspPI	GGATC	6 cut(s)	48, 61, 428, 441, 1565, 1570
BspT107I	GGYRCC	2 cut(s)	196, 1346
BsrDI	GCAATG	1 cut(s)	518
BsrGI	TGTACA	2 cut(s)	873, 1307
BsrI	ACTGG	5 cut(s)	57, 763, 1105, 1220, 1734
BssECI	CCNNGG	1 cut(s)	1788
BssNAI	GTATAC	1 cut(s)	1585
BssNI	GRCGYC	1 cut(s)	208
Bst1107I	GTATAC	1 cut(s)	1585
Bst2UI	CCWGG	2 cut(s)	51, 1789
Bst6I	CTCTTC	2 cut(s)	1130, 1401
BstACI	GRCGYC	1 cut(s)	208
BstAUI	TGTACA	2 cut(s)	873, 1307
BstBAI	YACGTR	1 cut(s)	1525
BstC8I	GCNNGC	2 cut(s)	1498, 1954
BstDEI	CTNAG	5 cut(s)	85, 251, 564, 1749, 1835
BstENI	CCTNNNNNAGG	1 cut(s)	1341
BstF5I	GGATG	8 cut(s)	511, 687, 981, 1111, 1173, 1352, 1762, 1918
BstFNI	CGCG	1 cut(s)	388
BstMWI	GCNNNNNNNGC	4 cut(s)	152, 854, 1340, 1849
BstNI	CCWGG	2 cut(s)	51, 1789
BstNSI	RCATGY	2 cut(s)	1117, 1500
BstPAI	GACNNNNGTC	1 cut(s)	1697
BstSCI	CCNGG	3 cut(s)	49, 1674, 1787
BstSFI	CTRYAG	4 cut(s)	344, 1160, 1950, 1971
BstSLI	GKGCMC	1 cut(s)	591
BstSNI	TACGTA	1 cut(s)	1525
BstUI	CGCG	1 cut(s)	388
BstV1I	GCAGC	3 cut(s)	764, 1229, 1909
BstV2I	GAAGAC	2 cut(s)	1013, 1697
BstX2I	RGATCY	6 cut(s)	53, 433, 535, 1322, 1684, 1818
BstYI	RGATCY	6 cut(s)	53, 433, 535, 1322, 1684, 1818
BstZ17I	GTATAC	1 cut(s)	1585
Bsu15I	ATCGAT	1 cut(s)	462
BsuI	GTATCC	4 cut(s)	390, 1001, 1180, 1537
BsuRI	GGCC	2 cut(s)	848, 888
BsuTUI	ATCGAT	1 cut(s)	462
BtrI	CACGTC	1 cut(s)	586
BtsCI	GGATG	8 cut(s)	511, 687, 981, 1111, 1173, 1352, 1762, 1918
BtsI	GCAGTG	1 cut(s)	1023
BtsIMutI	CAGTG	1 cut(s)	1023
BveI	ACCTGC	1 cut(s)	1334
Cac8I	GCNNGC	2 cut(s)	1498, 1954
CaiI	CAGNNNCTG	2 cut(s)	352, 758
Cfr13I	GGNCC	2 cut(s)	670, 846
ClaI	ATCGAT	1 cut(s)	462
Csp6I	GTAC	7 cut(s)	69, 197, 874, 969, 1308, 1347, 1727
CviQI	GTAC	7 cut(s)	69, 197, 874, 969, 1308, 1347, 1727
DdeI	CTNAG	5 cut(s)	85, 251, 564, 1749, 1835
DraI	TTTAAA	2 cut(s)	639, 829
EaeI	YGGCCR	1 cut(s)	886
Eam1104I	CTCTTC	2 cut(s)	1130, 1401
EarI	CTCTTC	2 cut(s)	1130, 1401
Eco105I	TACGTA	1 cut(s)	1525
Eco32I	GATATC	5 cut(s)	622, 648, 740, 1795, 1946
Eco47I	GGWCC	1 cut(s)	670
Eco57I	CTGAAG	3 cut(s)	1017, 1359, 1709
Eco88I	CYCGRG	2 cut(s)	1214, 1452
EcoNI	CCTNNNNNAGG	1 cut(s)	1341
EcoO109I	RGGNCCY	1 cut(s)	670
EcoRII	CCWGG	2 cut(s)	49, 1787
EcoRV	GATATC	5 cut(s)	622, 648, 740, 1795, 1946
FaqI	GGGAC	4 cut(s)	219, 1537, 1691, 1914
FauI	CCCGC	1 cut(s)	381
FauNDI	CATATG	2 cut(s)	297, 1594
FbaI	TGATCA	1 cut(s)	1180
FblI	GTMKAC	2 cut(s)	1227, 1584
Fnu4HI	GCNGC	6 cut(s)	753, 1243, 1541, 1544, 1923, 1974
FokI	GGATG	8 cut(s)	518, 674, 988, 1118, 1160, 1339, 1769, 1925
Fsp4HI	GCNGC	6 cut(s)	753, 1243, 1541, 1544, 1923, 1974
FspBI	CTAG	5 cut(s)	278, 704, 965, 1580, 1719
GluI	GCNGC	6 cut(s)	753, 1243, 1541, 1544, 1923, 1974
GsuI	CTGGAG	1 cut(s)	1838
HaeIII	GGCC	2 cut(s)	848, 888
HapII	CCGG	2 cut(s)	1574, 1675
Hin1I	GRCGYC	1 cut(s)	208
HincII	GTYRAC	1 cut(s)	120
HindII	GTYRAC	1 cut(s)	120
HindIII	AAGCTT	1 cut(s)	1841
HinfI	GANTC	4 cut(s)	97, 247, 568, 731
HpaII	CCGG	2 cut(s)	1574, 1675
HphI	GGTGA	2 cut(s)	256, 1403
Hpy166II	GTNNAC	5 cut(s)	120, 1072, 1228, 1373, 1585
Hpy8I	GTNNAC	5 cut(s)	120, 1072, 1228, 1373, 1585
HpyAV	CCTTC	7 cut(s)	59, 610, 683, 928, 1286, 1495, 1708
HpyCH4IV	ACGT	7 cut(s)	208, 585, 765, 1378, 1524, 1671, 1725
HpyF10VI	GCNNNNNNNGC	4 cut(s)	152, 854, 1340, 1849
HpyF3I	CTNAG	5 cut(s)	85, 251, 564, 1749, 1835
HpySE526I	ACGT	7 cut(s)	208, 585, 765, 1378, 1524, 1671, 1725
Hsp92I	GRCGYC	1 cut(s)	208
Kpn2I	TCCGGA	1 cut(s)	1573
KpnI	GGTACC	2 cut(s)	200, 1350
Ksp22I	TGATCA	1 cut(s)	1180
LmnI	GCTCC	3 cut(s)	1576, 1600, 1857
Lsp1109I	GCAGC	3 cut(s)	764, 1229, 1909
LweI	GCATC	6 cut(s)	50, 1051, 1527, 1735, 1833, 1885
MaeI	CTAG	5 cut(s)	278, 704, 965, 1580, 1719
MaeII	ACGT	7 cut(s)	208, 585, 765, 1378, 1524, 1671, 1725
MaeIII	GTNAC	3 cut(s)	280, 1721, 1859
MfeI	CAATTG	2 cut(s)	225, 1266
MflI	RGATCY	6 cut(s)	53, 433, 535, 1322, 1684, 1818
MhlI	GDGCHC	1 cut(s)	591
MlsI	TGGCCA	1 cut(s)	888
MluNI	TGGCCA	1 cut(s)	888
MlyI	GAGTC	1 cut(s)	91
MmeI	TCCRAC	4 cut(s)	618, 715, 817, 1554
Mox20I	TGGCCA	1 cut(s)	888
MroI	TCCGGA	1 cut(s)	1573
MroXI	GAANNNNTTC	1 cut(s)	1410
MscI	TGGCCA	1 cut(s)	888
MslI	CAYNNNNRTG	1 cut(s)	1881
Msp20I	TGGCCA	1 cut(s)	888
MspI	CCGG	2 cut(s)	1574, 1675
MspR9I	CCNGG	3 cut(s)	51, 1676, 1789
MunI	CAATTG	2 cut(s)	225, 1266
Mva1269I	GAATGC	2 cut(s)	857, 1281
MvaI	CCWGG	2 cut(s)	51, 1789
MvnI	CGCG	1 cut(s)	388
MwoI	GCNNNNNNNGC	4 cut(s)	152, 854, 1340, 1849
NciI	CCSGG	1 cut(s)	1676
NdeI	CATATG	2 cut(s)	297, 1594
NlaIV	GGNNCC	4 cut(s)	55, 198, 435, 1348
NmuCI	GTSAC	2 cut(s)	280, 1859
NspI	RCATGY	2 cut(s)	1117, 1500
PaeI	GCATGC	1 cut(s)	1500
PaeR7I	CTCGAG	1 cut(s)	1214
PcsI	WCGNNNNNNNCGW	3 cut(s)	591, 1428, 1677
PctI	GAATGC	2 cut(s)	857, 1281
PdmI	GAANNNNTTC	1 cut(s)	1410
PfeI	GAWTC	3 cut(s)	247, 568, 731
PfoI	TCCNGGA	1 cut(s)	1674
PkrI	GCNGC	6 cut(s)	754, 1244, 1542, 1545, 1924, 1975
PleI	GAGTC	1 cut(s)	91
PpsI	GAGTC	1 cut(s)	91
Ppu21I	YACGTR	1 cut(s)	1525
PpuMI	RGGWCCY	1 cut(s)	670
PshAI	GACNNNNGTC	1 cut(s)	1697
PshBI	ATTAAT	3 cut(s)	359, 785, 1206
PsiI	TTATAA	1 cut(s)	662
Psp1406I	AACGTT	1 cut(s)	765
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	2 cut(s)	49, 1787
PspGI	CCWGG	2 cut(s)	49, 1787
PspN4I	GGNNCC	4 cut(s)	55, 198, 435, 1348
PspPI	GGNCC	2 cut(s)	670, 846
PspPPI	RGGWCCY	1 cut(s)	670
PstI	CTGCAG	3 cut(s)	348, 1954, 1975
PstNI	CAGNNNCTG	2 cut(s)	352, 758
PsuI	RGATCY	6 cut(s)	53, 433, 535, 1322, 1684, 1818
RsaI	GTAC	7 cut(s)	70, 198, 875, 970, 1309, 1348, 1728
RsaNI	GTAC	7 cut(s)	69, 197, 874, 969, 1308, 1347, 1727
RseI	CAYNNNNRTG	1 cut(s)	1881
SatI	GCNGC	6 cut(s)	753, 1243, 1541, 1544, 1923, 1974
Sau96I	GGNCC	2 cut(s)	670, 846
SbfI	CCTGCAGG	1 cut(s)	1954
SchI	GAGTC	1 cut(s)	91
ScrFI	CCNGG	3 cut(s)	51, 1676, 1789
SdaI	CCTGCAGG	1 cut(s)	1954
SduI	GDGCHC	1 cut(s)	591
SfaNI	GCATC	6 cut(s)	50, 1051, 1527, 1735, 1833, 1885
SfcI	CTRYAG	4 cut(s)	344, 1160, 1950, 1971
Sfr274I	CTCGAG	1 cut(s)	1214
SinI	GGWCC	1 cut(s)	670
SlaI	CTCGAG	1 cut(s)	1214
SmiMI	CAYNNNNRTG	1 cut(s)	1881
SmlI	CTYRAG	3 cut(s)	651, 1214, 1652
SmoI	CTYRAG	3 cut(s)	651, 1214, 1652
SnaBI	TACGTA	1 cut(s)	1525
SpeI	ACTAGT	2 cut(s)	277, 703
SphI	GCATGC	1 cut(s)	1500
Sse8387I	CCTGCAGG	1 cut(s)	1954
SsiI	CCGC	3 cut(s)	388, 1540, 1543
SspI	AATATT	1 cut(s)	176
SspMI	CTAG	5 cut(s)	278, 704, 965, 1580, 1719
StyD4I	CCNGG	3 cut(s)	49, 1674, 1787
TaiI	ACGT	7 cut(s)	211, 588, 768, 1381, 1527, 1674, 1728
TaqI	TCGA	7 cut(s)	240, 462, 603, 666, 1215, 1565, 1797
TaqII	GACCGA	1 cut(s)	1025
TatI	WGTACW	2 cut(s)	873, 1307
TauI	GCSGC	2 cut(s)	1543, 1546
TfiI	GAWTC	3 cut(s)	247, 568, 731
TscAI	CASTG	1 cut(s)	1023
TseFI	GTSAC	2 cut(s)	280, 1859
TseI	GCWGC	4 cut(s)	752, 1242, 1922, 1973
Tsp45I	GTSAC	2 cut(s)	280, 1859
TspDTI	ATGAA	8 cut(s)	448, 740, 762, 1122, 1376, 1658, 1727, 1899
TspGWI	ACGGA	4 cut(s)	86, 280, 1358, 1918
TspRI	CASTG	1 cut(s)	1023
VpaK11BI	GGWCC	1 cut(s)	670
VspI	ATTAAT	3 cut(s)	359, 785, 1206
XagI	CCTNNNNNAGG	1 cut(s)	1341
XapI	RAATTY	2 cut(s)	370, 953
XceI	RCATGY	2 cut(s)	1117, 1500
XhoI	CTCGAG	1 cut(s)	1214
XmiI	GTMKAC	2 cut(s)	1227, 1584
XmnI	GAANNNNTTC	1 cut(s)	1410
XspI	CTAG	5 cut(s)	278, 704, 965, 1580, 1719
ZraI	GACGTC	1 cut(s)	209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.