Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013610.1

Orthogroup ID

OG0003689

Physical Location & Seq

Genomic Coordinates Reverse (-)

71605 .. 77508

Gene Structure 5904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013610.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

atggcgacgagggcgagcaccggaagccggacacgggtcgggaggtacgagctgggtcgggccctctgtgaggtcatatgtgcaggaacgtcgagaccggttgcggggagatttacactaacatgggaaagggtacttgcaatatcatgcattgcaatgtcagtagatcccttgttcttttacattccagttgttgatgagaatagcaagtgtcttggaatggacagaacattaagcaatacagttcttgtgttgcgatcacttacagatctcacttttacactccatattattgctctaattcatgatcggatcgacatcccctcaaactctgaccctgacccgggaaagcatatttatgaactcatacttaggaggatgaagtggttgtctaaagatatcataattgacgttattgctatacttcccatcccacaggaggagaaagttaaggcgaaatatgaagatctacattcgtggatgttagataatgctatccccgaaaaaatcaagatagaagtggtgaaaatcataaagtatcagaaaatatttgaaagaaactacgccactggtgtagatgttgatgtggacttagtttttgtattcaatgctatcactgtgaatggcaatcaacccgtggcaagttatttgaaggagcatttctgcgcaaatgccctcatgaaagtatccatccttcaagacgtgggagaagatgaattcaacttggtattaaagttttccatcccggtgatctacgaggagaatagctacgtggttcaagcaggagagccggatgacaaaatgctcatcatcacacaaggcgtgctaattgtatatgtggacaacaccgcagcaggctcttcatcaattatcatcccgaagtcacgttttgagaaaggtgaagtttatggagaagagcttttgaacggccgtattcctatatcgacccgagatgtcaaatgccaaacaaaagtagaagccttcgctctcacaagtcgtgggttgaaatttgtggtaaccatgctgcggcagacacgtacgacttcgacattgttctatgatccagaactagtaaacaaggcatatagagagttaacaacgacaagatcggagaagttactacagaaaaagatgaagatggattgcaaggagaaggatatacttgagtggctgtcaagaaatggtgttcaccgggatcagcagacatcagttatgaaacacataaaggctaatagtgtactggaagaaaacttggatgctgaggtggatgtgaggtatctattctctattcgtcttccctggcatatcgaatatgaaataaagaaggatctctgcatgagtactctccataaagtacctgtacttgatggtgttgatgaagatgtgttgtaccgcatctgtttgtctctcgatccagtggtcctcccgaagaataactgtgttgttaaaccaggtggccaaattgatcggatgctcatcattgtagaaggtgaaattactttgaccgagcagactttccatgttttaagtagactaagaaagagaggcaacattgaaagaatactgaagaaaggcgatttctttggggaggaacttctgacttgggcattccctgacgtctctatttccaaatataaacctgatatctcgagaaaatatgttgattgtcgtgcaaaagtagaagcctttgctctcacgaaggagggtgtggaaagtgtagtcgcctactaccgggagggaaccaacatttttgagcagttggagaatggtaaagatggtgtggctgatactagtggtacatccacatccccaactattgagcagagacttgatcagcttattcagcaccaggttgacatgcttcaacagcatcgtgatgaaatggctaatcagggacggagattggatcagatagctgcattcctagccagattgggatatccagacacacctcctcctgcagcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

655

Amino Acids

74.37

Weight (kDa)

6.05

Isoelectric Point (pI)

35.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003689)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g05120
rosa_chinensis	RchiOBHm_Chr1g0324611 RchiOBHm_Chr5g0014651 RchiOBHm_Chr5g0014741
rosa_laevigata	RLG00000030187 RLG00000032136 RLG00000032137
rosa_multiflora	Rmu_sc0003893.1_g000002 Rmu_sc0003893.1_g000003 Rmu_sc0003893.1_g000007 Rmu_sc0013610.1_g000012
rosa_roxburghii	Rroxscaffold_159G00432980 Rroxscaffold_159G00432990 Rroxscaffold_1G00061790 Rroxscaffold_4G00325310 Rroxscaffold_4G00325330
rosa_rugosa	Rorug01G0047100.1 Rorug01G0047300 Rorug05G0020400 Rorug05G0020500
rosa_samantha	Rh1AG062700 Rh1AG062900 Rh1BG053100 Rh1CG064800 Rh1DG068900 Rh1DG069800 Rh5AG115900 Rh5BG112300 Rh5BG112800 Rh5CG124400 Rh7BG358300
rosa_wichuraiana	Rw1G005330 Rw5G009990 Rw5G010000 Rw5G010010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1620
Acc16I	TGCGCA	1 cut(s)	667
AccI	GTMKAC	1 cut(s)	1531
AciI	CCGC	4 cut(s)	104, 849, 1027, 1393
AclWI	GGATC	7 cut(s)	161, 320, 1055, 1203, 1335, 1406, 1914
AcoI	YGGCCR	2 cut(s)	928, 1456
AcsI	RAATTY	2 cut(s)	716, 1007
AcuI	CTGAAG	1 cut(s)	1586
AcyI	GRCGYC	1 cut(s)	1617
AfaI	GTAC	9 cut(s)	47, 135, 1039, 1239, 1342, 1356, 1362, 1391, 1798
AfiI	CCNNNNNNNGG	9 cut(s)	27, 34, 70, 104, 343, 344, 439, 1026, 1731
AflIII	ACRYGT	1 cut(s)	1034
AgeI	ACCGGT	1 cut(s)	97
AhlI	ACTAGT	2 cut(s)	1069, 1790
AjiI	CACGTC	1 cut(s)	703
AjnI	CCWGG	3 cut(s)	1298, 1450, 1848
AluBI	AGCT	6 cut(s)	52, 768, 919, 1837, 1916, 1964
AluI	AGCT	6 cut(s)	52, 768, 919, 1837, 1916, 1964
Alw21I	GWGCWC	1 cut(s)	20
Alw26I	GTCTC	4 cut(s)	88, 1410, 1624, 1819
AlwI	GGATC	7 cut(s)	161, 320, 1055, 1203, 1335, 1406, 1914
Ama87I	CYCGRG	3 cut(s)	343, 948, 1648
AoxI	GGCC	3 cut(s)	60, 928, 1456
ApaI	GGGCCC	1 cut(s)	64
ApeKI	GCWGC	4 cut(s)	851, 1024, 1916, 1961
ApoI	RAATTY	2 cut(s)	716, 1007
ArsI	GACNNNNNNTTYG	2 cut(s)	581, 613
AsiGI	ACCGGT	1 cut(s)	97
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	3 cut(s)	60, 61, 1420
AsuC2I	CCSGG	5 cut(s)	344, 345, 746, 1193, 1733
AsuHPI	GGTGA	5 cut(s)	535, 760, 911, 1181, 1502
AvaI	CYCGRG	3 cut(s)	343, 948, 1648
AvaII	GGWCC	1 cut(s)	1420
BaeGI	GKGCMC	1 cut(s)	64
BalI	TGGCCA	1 cut(s)	1458
BanII	GRGCYC	1 cut(s)	64
BarI	GAAGNNNNNNTAC	2 cut(s)	678, 710
BbsI	GAAGAC	1 cut(s)	1286
Bbv12I	GWGCWC	1 cut(s)	20
BbvCI	CCTCAGC	1 cut(s)	1260
BbvI	GCAGC	3 cut(s)	863, 1011, 1903
BccI	CCATC	6 cut(s)	437, 698, 749, 1132, 1361, 1769
BceAI	ACGGC	2 cut(s)	915, 943
BcgI	CGANNNNNNTGC	2 cut(s)	72, 106
BciT130I	CCWGG	3 cut(s)	1300, 1452, 1850
BciVI	GTATCC	1 cut(s)	697
BclI	TGATCA	1 cut(s)	1831
BcnI	CCSGG	5 cut(s)	344, 345, 746, 1193, 1733
BcoDI	GTCTC	4 cut(s)	88, 1410, 1624, 1819
BcuI	ACTAGT	2 cut(s)	1069, 1790
BfaI	CTAG	3 cut(s)	1070, 1791, 1925
BfmI	CTRYAG	2 cut(s)	1121, 1959
BfuI	GTATCC	1 cut(s)	697
BglII	AGATCT	2 cut(s)	268, 466
BisI	GCNGC	5 cut(s)	852, 1025, 1028, 1917, 1962
BlsI	GCNGC	5 cut(s)	853, 1026, 1029, 1918, 1963
BmcAI	AGTACT	1 cut(s)	1342
Bme1390I	CCNGG	8 cut(s)	344, 345, 746, 1193, 1300, 1452, 1733, 1850
Bme18I	GGWCC	1 cut(s)	1420
BmeT110I	CYCGRG	3 cut(s)	343, 948, 1648
BmgBI	CACGTC	1 cut(s)	703
BmgT120I	GGNCC	3 cut(s)	60, 61, 1420
BmiI	GGNNCC	2 cut(s)	62, 1741
BmrFI	CCNGG	8 cut(s)	344, 345, 746, 1193, 1300, 1452, 1733, 1850
BmsI	GCATC	4 cut(s)	1246, 1404, 1461, 1879
BoxI	GACNNNNGTC	1 cut(s)	35
BpiI	GAAGAC	1 cut(s)	1286
Bpu10I	CCTNAGC	1 cut(s)	1260
BpuEI	CTTGAG	1 cut(s)	1184
BpuMI	CCSGG	5 cut(s)	344, 345, 746, 1193, 1733
BsaAI	YACGTR	2 cut(s)	772, 1037
BsaBI	GATNNNNATC	2 cut(s)	317, 1475
BsaHI	GRCGYC	1 cut(s)	1617
BsaI	GGTCTC	1 cut(s)	88
BsaJI	CCNNGG	3 cut(s)	343, 636, 1298
BsaWI	WCCGGW	2 cut(s)	20, 97
BsaXI	ACNNNNNCTCC	1 cut(s)	1939
Bsc4I	CCNNNNNNNGG	9 cut(s)	27, 34, 70, 104, 343, 344, 439, 1026, 1731
Bse118I	RCCGGY	1 cut(s)	97
Bse1I	ACTGG	4 cut(s)	188, 574, 1245, 1415
Bse3DI	GCAATG	2 cut(s)	150, 162
Bse8I	GATNNNNATC	2 cut(s)	317, 1475
BseBI	CCWGG	3 cut(s)	1300, 1452, 1850
BseDI	CCNNGG	3 cut(s)	343, 636, 1298
BseJI	GATNNNNATC	2 cut(s)	317, 1475
BseLI	CCNNNNNNNGG	9 cut(s)	27, 34, 70, 104, 343, 344, 439, 1026, 1731
BseMI	GCAATG	2 cut(s)	150, 162
BseMII	CTCAG	1 cut(s)	1251
BseNI	ACTGG	4 cut(s)	188, 574, 1245, 1415
BseRI	GAGGAG	3 cut(s)	455, 773, 1944
BseSI	GKGCMC	1 cut(s)	64
BseX3I	CGGCCG	1 cut(s)	928
BseXI	GCAGC	3 cut(s)	863, 1011, 1903
BseYI	CCCAGC	1 cut(s)	52
BsgI	GTGCAG	1 cut(s)	102
Bsh1285I	CGRYCG	1 cut(s)	931
BshFI	GGCC	3 cut(s)	62, 930, 1458
BshTI	ACCGGT	1 cut(s)	97
BsiEI	CGRYCG	1 cut(s)	931
BsiHKAI	GWGCWC	1 cut(s)	20
BsiHKCI	CYCGRG	3 cut(s)	343, 948, 1648
BsiSI	CCGG	8 cut(s)	21, 28, 98, 344, 746, 791, 1192, 1732
BsiWI	CGTACG	1 cut(s)	1037
BslFI	GGGAC	1 cut(s)	1908
BslI	CCNNNNNNNGG	9 cut(s)	27, 34, 70, 104, 343, 344, 439, 1026, 1731
BsmAI	GTCTC	4 cut(s)	88, 1410, 1624, 1819
BsmBI	CGTCTC	1 cut(s)	1624
BsmFI	GGGAC	1 cut(s)	1908
BsmI	GAATGC	2 cut(s)	1607, 1919
BsnI	GGCC	3 cut(s)	62, 930, 1458
Bso31I	GGTCTC	1 cut(s)	88
BsoBI	CYCGRG	3 cut(s)	343, 948, 1648
Bsp120I	GGGCCC	1 cut(s)	60
Bsp1286I	GDGCHC	2 cut(s)	20, 64
BspACI	CCGC	4 cut(s)	104, 849, 1027, 1393
BspANI	GGCC	3 cut(s)	62, 930, 1458
BspCNI	CTCAG	1 cut(s)	1252
BspHI	TCATGA	2 cut(s)	304, 678
BspLI	GGNNCC	2 cut(s)	62, 1741
BspMAI	CTGCAG	1 cut(s)	1963
BspPI	GGATC	7 cut(s)	161, 320, 1055, 1203, 1335, 1406, 1914
BspQI	GCTCTTC	2 cut(s)	865, 909
BspTNI	GGTCTC	1 cut(s)	88
BsrDI	GCAATG	2 cut(s)	150, 162
BsrFI	RCCGGY	1 cut(s)	97
BsrI	ACTGG	4 cut(s)	188, 574, 1245, 1415
BssAI	RCCGGY	1 cut(s)	97
BssECI	CCNNGG	3 cut(s)	343, 636, 1298
BssNI	GRCGYC	1 cut(s)	1617
Bst2UI	CCWGG	3 cut(s)	1300, 1452, 1850
Bst4CI	ACNGT	3 cut(s)	244, 619, 1439
Bst6I	CTCTTC	2 cut(s)	865, 909
BstACI	GRCGYC	1 cut(s)	1617
BstBAI	YACGTR	2 cut(s)	772, 1037
BstC8I	GCNNGC	3 cut(s)	16, 824, 856
BstDEI	CTNAG	4 cut(s)	371, 592, 1260, 1535
BstDSI	CCRYGG	1 cut(s)	636
BstEII	GGTNACC	1 cut(s)	1015
BstENI	CCTNNNNNAGG	1 cut(s)	68
BstHHI	GCGC	1 cut(s)	668
BstMAI	GTCTC	4 cut(s)	88, 1410, 1624, 1819
BstMCI	CGRYCG	1 cut(s)	931
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 24, 1843, 1867, 1925
BstNI	CCWGG	3 cut(s)	1300, 1452, 1850
BstNSI	RCATGY	1 cut(s)	1861
BstPAI	GACNNNNGTC	1 cut(s)	35
BstPI	GGTNACC	1 cut(s)	1015
BstSCI	CCNGG	8 cut(s)	342, 343, 744, 1191, 1298, 1450, 1731, 1848
BstSFI	CTRYAG	2 cut(s)	1121, 1959
BstSLI	GKGCMC	1 cut(s)	64
BstV1I	GCAGC	3 cut(s)	863, 1011, 1903
BstV2I	GAAGAC	1 cut(s)	1286
BstX2I	RGATCY	4 cut(s)	166, 268, 466, 1327
BstYI	RGATCY	4 cut(s)	166, 268, 466, 1327
BstZI	CGGCCG	1 cut(s)	928
BsuI	GTATCC	1 cut(s)	697
BsuRI	GGCC	3 cut(s)	62, 930, 1458
BtgI	CCRYGG	1 cut(s)	636
BtrI	CACGTC	1 cut(s)	703
BtsIMutI	CAGTG	3 cut(s)	567, 615, 1422
Cac8I	GCNNGC	3 cut(s)	16, 824, 856
CciI	TCATGA	2 cut(s)	304, 678
CfoI	GCGC	1 cut(s)	668
Cfr10I	RCCGGY	1 cut(s)	97
Cfr13I	GGNCC	3 cut(s)	60, 61, 1420
Cfr9I	CCCGGG	1 cut(s)	343
CsiI	ACCWGGT	2 cut(s)	1450, 1848
Csp6I	GTAC	9 cut(s)	46, 134, 1038, 1238, 1341, 1355, 1361, 1390, 1797
CspAI	ACCGGT	1 cut(s)	97
CviAII	CATG	8 cut(s)	123, 147, 305, 679, 1021, 1336, 1520, 1858
CviQI	GTAC	9 cut(s)	46, 134, 1038, 1238, 1341, 1355, 1361, 1390, 1797
DdeI	CTNAG	4 cut(s)	371, 592, 1260, 1535
EaeI	YGGCCR	2 cut(s)	928, 1456
EagI	CGGCCG	1 cut(s)	928
Eam1104I	CTCTTC	2 cut(s)	865, 909
EarI	CTCTTC	2 cut(s)	865, 909
EclXI	CGGCCG	1 cut(s)	928
Eco24I	GRGCYC	1 cut(s)	64
Eco31I	GGTCTC	1 cut(s)	88
Eco32I	GATATC	3 cut(s)	400, 1645, 1940
Eco47I	GGWCC	1 cut(s)	1420
Eco52I	CGGCCG	1 cut(s)	928
Eco57I	CTGAAG	1 cut(s)	1586
Eco88I	CYCGRG	3 cut(s)	343, 948, 1648
Eco91I	GGTNACC	1 cut(s)	1015
EcoNI	CCTNNNNNAGG	1 cut(s)	68
EcoO109I	RGGNCCY	1 cut(s)	61
EcoO65I	GGTNACC	1 cut(s)	1015
EcoRI	GAATTC	1 cut(s)	716
EcoRII	CCWGG	3 cut(s)	1298, 1450, 1848
EcoRV	GATATC	3 cut(s)	400, 1645, 1940
EcoT22I	ATGCAT	1 cut(s)	152
EcoT38I	GRGCYC	1 cut(s)	64
Esp3I	CGTCTC	1 cut(s)	1624
FaeI	CATG	8 cut(s)	126, 150, 308, 682, 1024, 1339, 1523, 1861
FaqI	GGGAC	1 cut(s)	1908
FatI	CATG	8 cut(s)	122, 146, 304, 678, 1020, 1335, 1519, 1857
FauI	CCCGC	1 cut(s)	97
FauNDI	CATATG	1 cut(s)	77
FbaI	TGATCA	1 cut(s)	1831
FblI	GTMKAC	1 cut(s)	1531
Fnu4HI	GCNGC	5 cut(s)	852, 1025, 1028, 1917, 1962
FriOI	GRGCYC	1 cut(s)	64
Fsp4HI	GCNGC	5 cut(s)	852, 1025, 1028, 1917, 1962
FspBI	CTAG	3 cut(s)	1070, 1791, 1925
FspI	TGCGCA	1 cut(s)	667
GlaI	GCGC	1 cut(s)	667
GluI	GCNGC	5 cut(s)	852, 1025, 1028, 1917, 1962
GsaI	CCCAGC	1 cut(s)	56
HaeIII	GGCC	3 cut(s)	62, 930, 1458
HapII	CCGG	8 cut(s)	21, 28, 98, 344, 746, 791, 1192, 1732
HhaI	GCGC	1 cut(s)	668
Hin1I	GRCGYC	1 cut(s)	1617
Hin1II	CATG	8 cut(s)	126, 150, 308, 682, 1024, 1339, 1523, 1861
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HincII	GTYRAC	2 cut(s)	1095, 1855
HindII	GTYRAC	2 cut(s)	1095, 1855
HpaI	GTTAAC	1 cut(s)	1095
HpaII	CCGG	8 cut(s)	21, 28, 98, 344, 746, 791, 1192, 1732
HphI	GGTGA	5 cut(s)	535, 760, 911, 1181, 1502
Hpy166II	GTNNAC	8 cut(s)	589, 841, 1075, 1095, 1189, 1238, 1532, 1855
Hpy188I	TCNGA	7 cut(s)	312, 334, 543, 1111, 1470, 1599, 1911
Hpy8I	GTNNAC	8 cut(s)	589, 841, 1075, 1095, 1189, 1238, 1532, 1855
Hpy99I	CGWCG	2 cut(s)	10, 94
HpyAV	CCTTC	7 cut(s)	646, 704, 991, 1147, 1318, 1481, 1693
HpyCH4III	ACNGT	3 cut(s)	244, 619, 1439
HpyCH4IV	ACGT	7 cut(s)	89, 411, 702, 771, 886, 1036, 1617
HpyCH4V	TGCA	9 cut(s)	83, 140, 150, 155, 1146, 1335, 1673, 1919, 1961
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 24, 1843, 1867, 1925
HpyF3I	CTNAG	4 cut(s)	371, 592, 1260, 1535
HpySE526I	ACGT	7 cut(s)	89, 411, 702, 771, 886, 1036, 1617
Hsp92I	GRCGYC	1 cut(s)	1617
Hsp92II	CATG	8 cut(s)	126, 150, 308, 682, 1024, 1339, 1523, 1861
HspAI	GCGC	1 cut(s)	666
Ksp22I	TGATCA	1 cut(s)	1831
KspAI	GTTAAC	1 cut(s)	1095
LguI	GCTCTTC	2 cut(s)	865, 909
LmnI	GCTCC	1 cut(s)	655
Lsp1109I	GCAGC	3 cut(s)	863, 1011, 1903
LweI	GCATC	4 cut(s)	1246, 1404, 1461, 1879
MabI	ACCWGGT	2 cut(s)	1450, 1848
MaeI	CTAG	3 cut(s)	1070, 1791, 1925
MaeII	ACGT	7 cut(s)	89, 411, 702, 771, 886, 1036, 1617
MaeIII	GTNAC	3 cut(s)	882, 1015, 1116
MflI	RGATCY	4 cut(s)	166, 268, 466, 1327
MhlI	GDGCHC	2 cut(s)	20, 64
MlsI	TGGCCA	1 cut(s)	1458
MluCI	AATT	8 cut(s)	300, 405, 716, 828, 867, 1007, 1461, 1494
MluNI	TGGCCA	1 cut(s)	1458
MmeI	TCCRAC	1 cut(s)	1740
Mox20I	TGGCCA	1 cut(s)	1458
Mph1103I	ATGCAT	1 cut(s)	152
MscI	TGGCCA	1 cut(s)	1458
MseI	TTAA	6 cut(s)	233, 450, 731, 1094, 1446, 1526
MslI	CAYNNNNRTG	5 cut(s)	121, 155, 357, 746, 1875
Msp20I	TGGCCA	1 cut(s)	1458
MspI	CCGG	8 cut(s)	21, 28, 98, 344, 746, 791, 1192, 1732
MspR9I	CCNGG	8 cut(s)	344, 345, 746, 1193, 1300, 1452, 1733, 1850
Mva1269I	GAATGC	2 cut(s)	1607, 1919
MvaI	CCWGG	3 cut(s)	1300, 1452, 1850
MwoI	GCNNNNNNNGC	5 cut(s)	11, 24, 1843, 1867, 1925
NciI	CCSGG	5 cut(s)	344, 345, 746, 1193, 1733
NdeI	CATATG	1 cut(s)	77
NlaIII	CATG	8 cut(s)	126, 150, 308, 682, 1024, 1339, 1523, 1861
NlaIV	GGNNCC	2 cut(s)	62, 1741
NmuCI	GTSAC	1 cut(s)	882
NsbI	TGCGCA	1 cut(s)	667
NsiI	ATGCAT	1 cut(s)	152
NspI	RCATGY	1 cut(s)	1861
PaeR7I	CTCGAG	1 cut(s)	1648
PagI	TCATGA	2 cut(s)	304, 678
PciSI	GCTCTTC	2 cut(s)	865, 909
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	2 cut(s)	1607, 1919
Pfl23II	CGTACG	1 cut(s)	1037
PinAI	ACCGGT	1 cut(s)	97
PkrI	GCNGC	5 cut(s)	853, 1026, 1029, 1918, 1963
Ppu21I	YACGTR	2 cut(s)	772, 1037
PshAI	GACNNNNGTC	1 cut(s)	35
Psp6I	CCWGG	3 cut(s)	1298, 1450, 1848
PspEI	GGTNACC	1 cut(s)	1015
PspFI	CCCAGC	1 cut(s)	52
PspGI	CCWGG	3 cut(s)	1298, 1450, 1848
PspLI	CGTACG	1 cut(s)	1037
PspN4I	GGNNCC	2 cut(s)	62, 1741
PspOMI	GGGCCC	1 cut(s)	60
PspPI	GGNCC	3 cut(s)	60, 61, 1420
PstI	CTGCAG	1 cut(s)	1963
PsuI	RGATCY	4 cut(s)	166, 268, 466, 1327
RsaI	GTAC	9 cut(s)	47, 135, 1039, 1239, 1342, 1356, 1362, 1391, 1798
RsaNI	GTAC	9 cut(s)	46, 134, 1038, 1238, 1341, 1355, 1361, 1390, 1797
RseI	CAYNNNNRTG	5 cut(s)	121, 155, 357, 746, 1875
SapI	GCTCTTC	2 cut(s)	865, 909
SaqAI	TTAA	6 cut(s)	233, 450, 731, 1094, 1446, 1526
SatI	GCNGC	5 cut(s)	852, 1025, 1028, 1917, 1962
Sau96I	GGNCC	3 cut(s)	60, 61, 1420
ScaI	AGTACT	1 cut(s)	1342
ScrFI	CCNGG	8 cut(s)	344, 345, 746, 1193, 1300, 1452, 1733, 1850
SduI	GDGCHC	2 cut(s)	20, 64
SexAI	ACCWGGT	2 cut(s)	1450, 1848
SfaNI	GCATC	4 cut(s)	1246, 1404, 1461, 1879
SfcI	CTRYAG	2 cut(s)	1121, 1959
Sfr274I	CTCGAG	1 cut(s)	1648
SinI	GGWCC	1 cut(s)	1420
SlaI	CTCGAG	1 cut(s)	1648
SmaI	CCCGGG	1 cut(s)	345
SmiMI	CAYNNNNRTG	5 cut(s)	121, 155, 357, 746, 1875
SmlI	CTYRAG	2 cut(s)	1163, 1648
SmoI	CTYRAG	2 cut(s)	1163, 1648
SpeI	ACTAGT	2 cut(s)	1069, 1790
Sse9I	AATT	8 cut(s)	300, 405, 716, 828, 867, 1007, 1461, 1494
SsiI	CCGC	4 cut(s)	104, 849, 1027, 1393
SspI	AATATT	1 cut(s)	549
SspMI	CTAG	3 cut(s)	1070, 1791, 1925
StyD4I	CCNGG	8 cut(s)	342, 343, 744, 1191, 1298, 1450, 1731, 1848
TaaI	ACNGT	3 cut(s)	244, 619, 1439
TaiI	ACGT	7 cut(s)	92, 414, 705, 774, 889, 1039, 1620
TaqI	TCGA	7 cut(s)	92, 315, 944, 1046, 1308, 1410, 1649
TaqII	GACCGA	1 cut(s)	1520
TasI	AATT	8 cut(s)	300, 405, 716, 828, 867, 1007, 1461, 1494
TatI	WGTACW	3 cut(s)	1237, 1340, 1360
TauI	GCSGC	1 cut(s)	1030
Tru1I	TTAA	6 cut(s)	233, 450, 731, 1094, 1446, 1526
Tru9I	TTAA	6 cut(s)	233, 450, 731, 1094, 1446, 1526
TscAI	CASTG	3 cut(s)	574, 622, 1422
TseFI	GTSAC	1 cut(s)	882
TseI	GCWGC	4 cut(s)	851, 1024, 1916, 1961
Tsp45I	GTSAC	1 cut(s)	882
TspGWI	ACGGA	1 cut(s)	1912
TspMI	CCCGGG	1 cut(s)	343
TspRI	CASTG	3 cut(s)	574, 622, 1422
VpaK11BI	GGWCC	1 cut(s)	1420
XagI	CCTNNNNNAGG	1 cut(s)	68
XapI	RAATTY	2 cut(s)	716, 1007
XceI	RCATGY	1 cut(s)	1861
XhoI	CTCGAG	1 cut(s)	1648
XmaI	CCCGGG	1 cut(s)	343
XmiI	GTMKAC	1 cut(s)	1531
XspI	CTAG	3 cut(s)	1070, 1791, 1925
ZraI	GACGTC	1 cut(s)	1618
ZrmI	AGTACT	1 cut(s)	1342
Zsp2I	ATGCAT	1 cut(s)	152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.