Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001873

Physical Location & Seq

Genomic Coordinates Reverse (-)

29945579 .. 29952098

Gene Structure 6520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g34570.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3156 bp

ATGGCAAAAAAATCAGAGAAACCGGCGACCAAAACGGAGTCGTTTCCGGTGTGGTCGAAAGACGTGAAGGAATGCGAGGAGGAATTCAAGGTGAGCCGCGAGACGGGGCTGTCGTCGGAGGAAGTCGAGAAGCGGCGGGAGGTGTACGGCTGGAACGAACTGGAGAAGCACGAGGATCAGTCGCTCCTGAAGCTCCTGCTGGATCAGCTCAACGATACGCTCGTCCGGATTCTTCTCTTCGCGGCGGTCATCTCCTTCATTCTCGCCTGGTACGAAAGCGACGAGACCGGCGAGGTAGACGTCACGGCGTTCGTCGAGCCGCTGGTGATTTTTCTGATCCTGATCGTGAACGCGATCGTCGGAATCTGGCAGGAGAGTAATGCGGAGAAGGCGCTGGAGGCCTTGAAGGAGATTCAGTCGGAGCAGGCGGCGGTGGTGAGGGACGGGAAGAAGGTGCCGAATTTGGCGGCGAAGGAGCTCGTTCCCGGAGATATTGTGGAGCTGAGAGTCGGAGGTAAGGTTCCGGCGGATACGAGGGTTTTGAGTTTGGTGAGCTCGACGGTGAGGGTTGAGCAAGGGTCGCTGACCGGAGAGAGTGAGGCGGTTAGCAAGACGGCGAAGGCGGTGGCGGAGAATTCGGATATTCAGGGGAAGAAGTGTATGGTTTTCGCGGGAACGACGGTGGTGAACGGGAACTGCATGTGTTTGGTGACTCGGATTGGGATGAAGACGGAGATAGGGCAGGTGCATTCTCAGATTCATGAGGCTTCACAGATTGAGGAAGATACTCCGTTGAAGAAGAAGCTGAATGAGTTTGGAGAGATTTTGACAGCAATAATCGGTGTGATCTGCGCTTTGGTTTGGTTGATCAATCTCAAATACTTTCTCAGCTGGGAAATGGTGGATGGCTGGCCAACAAATTTCGCATTTTCGTTCGAGAGGTGTACTTATTACTTCAAGATTGCTGTGGCATTGGCCGTGGCGGCGATTCCAGAAGGCTTGCCTGCAGTGATCACCACTTGCTTGGCGCTTGGGACGAGGAAGATGGCTCAGAAGAATGCACTTGTGAGGAAGCTGCCGAGTGTGGAGACTCTTGGTTGTACTACTGTGATTTGTTCTGATAAGACGGGGACTCTGACTACTAATCAGATGGCCGTGGCGAAGCTTGTGGCTATTGGTAATAGGCCTGGGACTCTTCGATCCTTTGATGTCGAGGGAACAACATACGACCCTTCTGATGGGAAAATACCAGACTGGCCGCCGGCTGGTCATATGGATGCTAATGTTCAAATGATTGCAAAGATCTCTGCTTTGTGTAATGATGCTGGTGTTGAATTGTCAGGCAGTCATTATGTTGCCAGTGGAATGCCCACAGAAGCAGCCTTGAAGGTTCTGGTTGAGAAGATGGGAGTCCCTGAATCAGTCAATACTAGTGGTTCTAAGGATACACTGCGTTGTTGTACACATTGGAAGGACGTTGATCGGCGGATTGCAACGCTTGAGTTTGACCGTGACCGCAAATCCATGGGTGTAATTGTGAATACTGGCGCAGGAAAGAACTCTCTTTATGTCAAGGGTGCAGTTGAAAATTTATTGGAGCGCAGCTCATCCATTCAGTTGGTTGATGGCTCCATTGCAGAATTGGACCAAAATTTCAAGGATCTTATCTTAGGCAGCCTTCATGAAATGTCTACTAGTGCATTGCGCTGTTTGGGGTTTGCATACAAGGAGGACCTGCCAGAGTTCACAGGCTATAATGGTGATGAAGACCATCCAGCTCATCAGCAGTTACTTAATCCTTCCAATTACTCTTCAATTGAGAGTAAACTTGTATTTTCTGGCTTTGTTGGGCTAAGGGATCCTCCACGGAAAGAGGTCCGTCACGCAATTGAGGACTGCAAAACTGCTGGAATCCGTGTTATGGTTATTACAGGAGATAACAAGGGTACAGCTGAAGCTATTTGCCGTGAAATAGGTGTATTTGGACCTTCTGGAAATATCAGTTCAAGAAGCTTAACGGGGAAAGATTTTATACATCACCATGATCAGAAAAATCATCTGAGACAAAGTGGAGGCCTTTTGTTTTCTAGAGCTGAACCAAGGCATAAGCAAGAGATAGTGAGGCTGCTAAAGGAAGATGGTGAAGTTGTTGCTATGACTGGTGATGGAGTGAATGATGCACCTGCCTTGAAGCTGGCTGACATTGGGATTGCCATGGGCATTGCCGGGACAGAGGTTGCAAAGGAAGCCTCTGATATGGTATTAGCAGATGACAATTTTAGCACTATAGTTTCTGCTGTTGGACAAGGCAGATCTATTTACAACAACATGAAAGCTTTTATCAGGTACATGATTTCATCAAACATTGGCGAAGTTGCCTCCATTTTCCTAACAGCTGCCCTGGGAATTCCAGAAGGCATGATTCCAGTTCAGCTTCTCTGGGTCAACCTGGTTACTGATGGACCCCCAGCTACAGCTTTGGGATTCAATCCTCCGGACAAAGATATCATGGAAAAGCCCCCTAGAAGAAGCAACGACTCATTGATCACTGCTTGGATCTTATTCCGTTATCTGGTGATTGGTGTCTATGTTGGTGTTGCAACGGTTGGGGTGTTTGTTATCTGGTACACCCATTCCTCATTTTTGGGCATTGACCTCAGCGCAGATGGCCATAGTCTTGTGACCTACAATCAACTAGCAAATTGGCACAAGTGCTCATCTTGGGAGGGGTTTTCAGCATCCAACTTCACAGCTGGATCTCAGGTGCTCACTTTTGACACAGAACCATGTGACTATTTCCTTAACGGCAAGATCAAGGCCTCGACGCTCTCCCTCTCAGTCTTGGTTGCCATTGAGATGTTCAACTCCCTCAATGCCCTGTCCGAGGACAGTAGCCTCCTGATAATGCCTCCCTGGGTTAATCCATGGCTCCTTCTCGCCATGTCTGTCTCCTTCGGCTTGCACTTTCTGATCCTCTACGTCCCCTTCCTTGCTCAAGTGTTCGGTGTCGTCCCCCTCAGCTTGAATGAATGGTTCTTGGTGTTGGCTGTTGCTTTTCCAGTCATCTTAATCGATGAGGTACTCAAGTTTGTGGGAAGATGTACAACTAGGTCAACTGACTCCGCAGTAGAAAAATCCAAGCGCAAGACAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010042 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031984 GO:0034220 GO:0042175 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1052

Amino Acids

114.76

Weight (kDa)

5.36

Isoelectric Point (pI)

36.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	18 - 85	1.8e-20	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	138 - 252	9.9e-23	P-type ATPase actuator domain
Cation_ATPase	PF13246	429 - 625	1.6e-36	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	615 - 734	3.2e-14	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	806 - 1031	4.9e-49	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07670 AT1G07670 AT1G07810
fragaria_vesca	FvH4_3g34570 FvH4_3g34570 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760
malus_domestica	MD04G1038900.v1.1 MD04G1116400.v1.1 MD11G1117700.v1.1 MD12G1132100.v1.1 MD13G1142700.v1.1
prunus_persica	Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1
pyrus_communis	pycom03g12390 pycom03g12400 pycom04g10640 pycom07g10780 pycom11g09870 pycom12g12810 pycom16g18850
rosa_chinensis	RchiOBHm_Chr3g0467981 RchiOBHm_Chr5g0062231
rosa_laevigata	RLG00000024462 RLG00000035545
rosa_multiflora	Rmu_co8021382.1_g000001 Rmu_sc0001793.1_g000060 Rmu_ssc0000409.1_g000035
rosa_roxburghii	Rroxscaffold_1G00018460 Rroxscaffold_6G00413240
rosa_rugosa	Rorug03G0090700 Rorug03G0090800 Rorug05G0347300
rosa_samantha	Rh3AG139600 Rh3BG161100 Rh3CG161000 Rh3DG161500 Rh5AG407900 Rh5BG421600 Rh5CG445600 Rh5DG436600
rosa_wichuraiana	Rw3G013200 Rw5G038440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	733, 2191
AasI	GACNNNNNNGTC	1 cut(s)	109
AatII	GACGTC	1 cut(s)	303
Acc36I	ACCTGC	3 cut(s)	733, 1743, 2191
AccB1I	GGYRCC	1 cut(s)	454
AccI	GTMKAC	2 cut(s)	297, 1691
AccII	CGCG	4 cut(s)	99, 242, 353, 671
AccIII	TCCGGA	2 cut(s)	225, 2494
AcoI	YGGCCR	5 cut(s)	911, 975, 1152, 1256, 2668
AcsI	RAATTY	7 cut(s)	83, 460, 634, 919, 1588, 1651, 2406
AcuI	CTGAAG	2 cut(s)	209, 1974
AcyI	GRCGYC	1 cut(s)	300
AfiI	CCNNNNNNNGG	6 cut(s)	103, 1238, 1265, 1921, 2572, 2884
AhlI	ACTAGT	2 cut(s)	1430, 1694
AjiI	CACGTC	1 cut(s)	64
AjnI	CCWGG	5 cut(s)	266, 1186, 2400, 2448, 2912
AloI	GAACNNNNNNTCC	2 cut(s)	504, 536
Alw21I	GWGCWC	4 cut(s)	480, 557, 2717, 2769
Alw26I	GTCTC	5 cut(s)	95, 278, 1082, 2056, 2953
Aor13HI	TCCGGA	2 cut(s)	225, 2494
AoxI	GGCC	9 cut(s)	399, 911, 975, 1152, 1184, 1256, 2074, 2668, 2817
ApeKI	GCWGC	6 cut(s)	1075, 1379, 1602, 1674, 2125, 2396
ApoI	RAATTY	7 cut(s)	83, 460, 634, 919, 1588, 1651, 2406
AspLEI	GCGC	8 cut(s)	394, 854, 1030, 1550, 1602, 1707, 2663, 3144
AspS9I	GGNCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
AsuC2I	CCSGG	2 cut(s)	486, 2227
AvaII	GGWCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
BaeI	ACNNNNGTAYC	6 cut(s)	207, 240, 522, 555, 3071, 3104
BalI	TGGCCA	2 cut(s)	913, 2670
BamHI	GGATCC	1 cut(s)	1858
BanI	GGYRCC	1 cut(s)	454
BanII	GRGCYC	2 cut(s)	480, 557
BauI	CACGAG	1 cut(s)	170
BbsI	GAAGAC	2 cut(s)	734, 1773
Bbv12I	GWGCWC	4 cut(s)	480, 557, 2717, 2769
BbvCI	CCTCAGC	2 cut(s)	2657, 3017
BbvI	GCAGC	6 cut(s)	1062, 1391, 1614, 1686, 2112, 2383
BceAI	ACGGC	7 cut(s)	163, 321, 630, 962, 1139, 1950, 2821
BciT130I	CCWGG	5 cut(s)	268, 1188, 2402, 2450, 2914
BciVI	GTATCC	2 cut(s)	523, 1438
BclI	TGATCA	4 cut(s)	867, 1011, 2044, 2544
BcnI	CCSGG	2 cut(s)	486, 2227
BcoDI	GTCTC	5 cut(s)	95, 278, 1082, 2056, 2953
BcuI	ACTAGT	2 cut(s)	1430, 1694
BfaI	CTAG	6 cut(s)	1431, 1695, 2088, 2523, 2696, 3108
BfmI	CTRYAG	3 cut(s)	1005, 2286, 2472
BfoI	RGCGCY	2 cut(s)	395, 1031
BfuAI	ACCTGC	3 cut(s)	733, 1743, 2191
BfuI	GTATCC	2 cut(s)	523, 1438
BglI	GCCNNNNNGGC	1 cut(s)	983
BglII	AGATCT	2 cut(s)	1302, 2312
Bme1390I	CCNGG	7 cut(s)	268, 486, 1188, 2227, 2402, 2450, 2914
Bme18I	GGWCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
BmgBI	CACGTC	1 cut(s)	64
BmgT120I	GGNCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
BmiI	GGNNCC	6 cut(s)	456, 522, 1630, 1860, 2464, 2930
BmrFI	CCNGG	7 cut(s)	268, 486, 1188, 2227, 2402, 2450, 2914
BmsI	GCATC	4 cut(s)	1267, 1312, 2167, 2747
BpiI	GAAGAC	2 cut(s)	734, 1773
BplI	GAGNNNNNCTC	2 cut(s)	1589, 1621
BpmI	CTGGAG	2 cut(s)	182, 416
Bpu10I	CCTNAGC	3 cut(s)	1853, 2657, 3017
BpuEI	CTTGAG	3 cut(s)	1520, 2979, 3068
BpuMI	CCSGG	2 cut(s)	486, 2227
Bsa29I	ATCGAT	1 cut(s)	3072
BsaBI	GATNNNNATC	1 cut(s)	341
BsaHI	GRCGYC	1 cut(s)	300
BsaI	GGTCTC	1 cut(s)	278
BsaWI	WCCGGW	4 cut(s)	46, 225, 587, 2494
BsaXI	ACNNNNNCTCC	6 cut(s)	401, 431, 480, 504, 510, 534
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 1238, 1265, 1921, 2572, 2884
Bse118I	RCCGGY	3 cut(s)	22, 287, 1261
Bse1I	ACTGG	7 cut(s)	165, 1259, 1359, 1549, 2164, 2426, 3059
Bse3DI	GCAATG	3 cut(s)	1632, 1700, 2220
Bse8I	GATNNNNATC	1 cut(s)	341
BseAI	TCCGGA	2 cut(s)	225, 2494
BseBI	CCWGG	5 cut(s)	268, 1188, 2402, 2450, 2914
BseCI	ATCGAT	1 cut(s)	3072
BseGI	GGATG	6 cut(s)	729, 910, 1282, 1607, 1771, 2738
BseJI	GATNNNNATC	1 cut(s)	341
BseLI	CCNNNNNNNGG	6 cut(s)	103, 1238, 1265, 1921, 2572, 2884
BseMI	GCAATG	3 cut(s)	1632, 1700, 2220
BseMII	CTCAG	9 cut(s)	494, 767, 901, 1064, 2051, 2671, 2774, 2850, 3031
BseNI	ACTGG	7 cut(s)	165, 1259, 1359, 1549, 2164, 2426, 3059
BseRI	GAGGAG	1 cut(s)	92
BseXI	GCAGC	6 cut(s)	1062, 1391, 1614, 1686, 2112, 2383
BseYI	CCCAGC	2 cut(s)	891, 2467
BsgI	GTGCAG	1 cut(s)	1599
Bsh1236I	CGCG	4 cut(s)	99, 242, 353, 671
Bsh1285I	CGRYCG	1 cut(s)	357
BshFI	GGCC	9 cut(s)	401, 913, 977, 1154, 1186, 1258, 2076, 2670, 2819
BshNI	GGYRCC	1 cut(s)	454
BshVI	ATCGAT	1 cut(s)	3072
BsiEI	CGRYCG	1 cut(s)	357
BsiHKAI	GWGCWC	4 cut(s)	480, 557, 2717, 2769
BslFI	GGGAC	8 cut(s)	455, 1048, 1144, 1204, 1397, 2242, 2966, 2996
BslI	CCNNNNNNNGG	6 cut(s)	103, 1238, 1265, 1921, 2572, 2884
BsmAI	GTCTC	5 cut(s)	95, 278, 1082, 2056, 2953
BsmBI	CGTCTC	1 cut(s)	95
BsmFI	GGGAC	8 cut(s)	455, 1048, 1144, 1204, 1397, 2242, 2966, 2996
BsmI	GAATGC	4 cut(s)	77, 748, 1063, 1371
BsnI	GGCC	9 cut(s)	401, 913, 977, 1154, 1186, 1258, 2076, 2670, 2819
Bso31I	GGTCTC	1 cut(s)	278
Bsp1286I	GDGCHC	4 cut(s)	480, 557, 2717, 2769
Bsp13I	TCCGGA	2 cut(s)	225, 2494
Bsp1407I	TGTACA	2 cut(s)	1460, 3101
Bsp19I	CCATGG	3 cut(s)	1524, 2214, 2924
BspANI	GGCC	9 cut(s)	401, 913, 977, 1154, 1186, 1258, 2076, 2670, 2819
BspCNI	CTCAG	9 cut(s)	495, 766, 900, 1063, 2052, 2670, 2773, 2849, 3030
BspDI	ATCGAT	1 cut(s)	3072
BspEI	TCCGGA	2 cut(s)	225, 2494
BspFNI	CGCG	4 cut(s)	99, 242, 353, 671
BspHI	TCATGA	2 cut(s)	760, 1681
BspLI	GGNNCC	6 cut(s)	456, 522, 1630, 1860, 2464, 2930
BspMAI	CTGCAG	1 cut(s)	1009
BspMI	ACCTGC	3 cut(s)	733, 1743, 2191
BspT107I	GGYRCC	1 cut(s)	454
BspTNI	GGTCTC	1 cut(s)	278
BsrDI	GCAATG	3 cut(s)	1632, 1700, 2220
BsrFI	RCCGGY	3 cut(s)	22, 287, 1261
BsrGI	TGTACA	2 cut(s)	1460, 3101
BsrI	ACTGG	7 cut(s)	165, 1259, 1359, 1549, 2164, 2426, 3059
BssAI	RCCGGY	3 cut(s)	22, 287, 1261
BssNI	GRCGYC	1 cut(s)	300
BssSI	CACGAG	1 cut(s)	170
BssT1I	CCWWGG	4 cut(s)	1524, 2099, 2214, 2924
Bst2BI	CACGAG	1 cut(s)	170
Bst2UI	CCWGG	5 cut(s)	268, 1188, 2402, 2450, 2914
Bst4CI	ACNGT	6 cut(s)	562, 682, 1108, 1511, 2605, 2891
Bst6I	CTCTTC	3 cut(s)	242, 1200, 1816
BstACI	GRCGYC	1 cut(s)	300
BstAUI	TGTACA	2 cut(s)	1460, 3101
BstC8I	GCNNGC	7 cut(s)	426, 911, 1001, 1005, 1263, 2196, 2960
BstDSI	CCRYGG	6 cut(s)	978, 1155, 1524, 1865, 2214, 2924
BstENI	CCTNNNNNAGG	1 cut(s)	2882
BstF5I	GGATG	6 cut(s)	729, 910, 1282, 1607, 1771, 2738
BstFNI	CGCG	4 cut(s)	99, 242, 353, 671
BstH2I	RGCGCY	2 cut(s)	395, 1031
BstHHI	GCGC	8 cut(s)	394, 854, 1030, 1550, 1602, 1707, 2663, 3144
BstMAI	GTCTC	5 cut(s)	95, 278, 1082, 2056, 2953
BstMCI	CGRYCG	1 cut(s)	357
BstMWI	GCNNNNNNNGC	8 cut(s)	190, 205, 389, 398, 580, 983, 2246, 2667
BstNI	CCWGG	5 cut(s)	268, 1188, 2402, 2450, 2914
BstNSI	RCATGY	1 cut(s)	703
BstSCI	CCNGG	7 cut(s)	266, 484, 1186, 2225, 2400, 2448, 2912
BstSFI	CTRYAG	3 cut(s)	1005, 2286, 2472
BstUI	CGCG	4 cut(s)	99, 242, 353, 671
BstV1I	GCAGC	6 cut(s)	1062, 1391, 1614, 1686, 2112, 2383
BstV2I	GAAGAC	2 cut(s)	734, 1773
BstX2I	RGATCY	6 cut(s)	1302, 1660, 1858, 2312, 2556, 2756
BstXI	CCANNNNNNTGG	2 cut(s)	1024, 1618
BstYI	RGATCY	6 cut(s)	1302, 1660, 1858, 2312, 2556, 2756
Bsu15I	ATCGAT	1 cut(s)	3072
BsuI	GTATCC	2 cut(s)	523, 1438
BsuRI	GGCC	9 cut(s)	401, 913, 977, 1154, 1186, 1258, 2076, 2670, 2819
BsuTUI	ATCGAT	1 cut(s)	3072
BtgI	CCRYGG	6 cut(s)	978, 1155, 1524, 1865, 2214, 2924
BtrI	CACGTC	1 cut(s)	64
BtsCI	GGATG	6 cut(s)	729, 910, 1282, 1607, 1771, 2738
BtsI	GCAGTG	3 cut(s)	1014, 1448, 2547
BtsIMutI	CAGTG	4 cut(s)	1014, 1366, 1448, 2547
BveI	ACCTGC	3 cut(s)	733, 1743, 2191
Cac8I	GCNNGC	7 cut(s)	426, 911, 1001, 1005, 1263, 2196, 2960
CciI	TCATGA	2 cut(s)	760, 1681
CfoI	GCGC	8 cut(s)	394, 854, 1030, 1550, 1602, 1707, 2663, 3144
Cfr10I	RCCGGY	3 cut(s)	22, 287, 1261
Cfr13I	GGNCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
ClaI	ATCGAT	1 cut(s)	3072
CseI	GACGC	1 cut(s)	2833
CsiI	ACCWGGT	1 cut(s)	2448
CspCI	CAANNNNNGTGG	2 cut(s)	1414, 1449
DrdI	GACNNNNNNGTC	1 cut(s)	109
DseDI	GACNNNNNNGTC	1 cut(s)	109
EaeI	YGGCCR	5 cut(s)	911, 975, 1152, 1256, 2668
Eam1104I	CTCTTC	3 cut(s)	242, 1200, 1816
EarI	CTCTTC	3 cut(s)	242, 1200, 1816
EciI	GGCGGA	3 cut(s)	542, 644, 1501
Ecl136II	GAGCTC	2 cut(s)	478, 555
Eco130I	CCWWGG	4 cut(s)	1524, 2099, 2214, 2924
Eco147I	AGGCCT	4 cut(s)	401, 1186, 2076, 2819
Eco24I	GRGCYC	2 cut(s)	480, 557
Eco31I	GGTCTC	1 cut(s)	278
Eco32I	GATATC	1 cut(s)	2506
Eco47I	GGWCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
Eco53kI	GAGCTC	2 cut(s)	478, 555
Eco57I	CTGAAG	2 cut(s)	209, 1974
EcoICRI	GAGCTC	2 cut(s)	478, 555
EcoNI	CCTNNNNNAGG	1 cut(s)	2882
EcoO109I	RGGNCCY	1 cut(s)	1732
EcoRI	GAATTC	3 cut(s)	83, 634, 2406
EcoRII	CCWGG	5 cut(s)	266, 1186, 2400, 2448, 2912
EcoRV	GATATC	1 cut(s)	2506
EcoT14I	CCWWGG	4 cut(s)	1524, 2099, 2214, 2924
EcoT38I	GRGCYC	2 cut(s)	480, 557
ErhI	CCWWGG	4 cut(s)	1524, 2099, 2214, 2924
Esp3I	CGTCTC	1 cut(s)	95
FaqI	GGGAC	8 cut(s)	455, 1048, 1144, 1204, 1397, 2242, 2966, 2996
FauI	CCCGC	2 cut(s)	129, 664
FauNDI	CATATG	1 cut(s)	1272
FbaI	TGATCA	4 cut(s)	867, 1011, 2044, 2544
FblI	GTMKAC	2 cut(s)	297, 1691
FokI	GGATG	6 cut(s)	736, 917, 1289, 1594, 1758, 2725
FriOI	GRGCYC	2 cut(s)	480, 557
FspBI	CTAG	6 cut(s)	1431, 1695, 2088, 2523, 2696, 3108
GlaI	GCGC	8 cut(s)	393, 853, 1029, 1549, 1601, 1706, 2662, 3143
GsaI	CCCAGC	2 cut(s)	895, 2471
GsuI	CTGGAG	2 cut(s)	182, 416
HaeII	RGCGCY	2 cut(s)	395, 1031
HaeIII	GGCC	9 cut(s)	401, 913, 977, 1154, 1186, 1258, 2076, 2670, 2819
HgaI	GACGC	1 cut(s)	2833
HhaI	GCGC	8 cut(s)	394, 854, 1030, 1550, 1602, 1707, 2663, 3144
Hin1I	GRCGYC	1 cut(s)	300
Hin6I	GCGC	8 cut(s)	392, 852, 1028, 1548, 1600, 1705, 2661, 3142
HinP1I	GCGC	8 cut(s)	392, 852, 1028, 1548, 1600, 1705, 2661, 3142
HincII	GTYRAC	2 cut(s)	2446, 3114
HindII	GTYRAC	2 cut(s)	2446, 3114
HindIII	AAGCTT	3 cut(s)	1163, 2011, 2334
Hpy99I	CGWCG	7 cut(s)	118, 284, 317, 362, 562, 682, 2827
HpyCH4III	ACNGT	6 cut(s)	562, 682, 1108, 1511, 2605, 2891
HpyCH4IV	ACGT	4 cut(s)	63, 300, 1476, 2979
HpyF10VI	GCNNNNNNNGC	8 cut(s)	190, 205, 389, 398, 580, 983, 2246, 2667
HpySE526I	ACGT	4 cut(s)	63, 300, 1476, 2979
Hsp92I	GRCGYC	1 cut(s)	300
HspAI	GCGC	8 cut(s)	392, 852, 1028, 1548, 1600, 1705, 2661, 3142
Kpn2I	TCCGGA	2 cut(s)	225, 2494
KroI	GCCGGC	1 cut(s)	1261
KroNI	GCCGGC	1 cut(s)	1263
Ksp22I	TGATCA	4 cut(s)	867, 1011, 2044, 2544
LmnI	GCTCC	8 cut(s)	189, 198, 421, 475, 499, 1597, 1634, 2934
Lsp1109I	GCAGC	6 cut(s)	1062, 1391, 1614, 1686, 2112, 2383
LweI	GCATC	4 cut(s)	1267, 1312, 2167, 2747
MabI	ACCWGGT	1 cut(s)	2448
MaeI	CTAG	6 cut(s)	1431, 1695, 2088, 2523, 2696, 3108
MaeII	ACGT	4 cut(s)	63, 300, 1476, 2979
MaeIII	GTNAC	8 cut(s)	301, 709, 1511, 1788, 1880, 2452, 2680, 2789
MfeI	CAATTG	2 cut(s)	1815, 1887
MflI	RGATCY	6 cut(s)	1302, 1660, 1858, 2312, 2556, 2756
MhlI	GDGCHC	4 cut(s)	480, 557, 2717, 2769
MlsI	TGGCCA	2 cut(s)	913, 2670
MluNI	TGGCCA	2 cut(s)	913, 2670
MlyI	GAGTC	9 cut(s)	47, 516, 706, 1084, 1126, 1186, 1419, 2531, 3113
MmeI	TCCRAC	6 cut(s)	96, 340, 399, 490, 2281, 2766
Mox20I	TGGCCA	2 cut(s)	913, 2670
MroI	TCCGGA	2 cut(s)	225, 2494
MroNI	GCCGGC	1 cut(s)	1261
MscI	TGGCCA	2 cut(s)	913, 2670
MseI	TTAA	5 cut(s)	1794, 2015, 2802, 2919, 3068
MslI	CAYNNNNRTG	3 cut(s)	1275, 2040, 2855
Msp20I	TGGCCA	2 cut(s)	913, 2670
MspA1I	CMGCKG	5 cut(s)	322, 891, 1952, 2396, 2753
MspR9I	CCNGG	7 cut(s)	268, 486, 1188, 2227, 2402, 2450, 2914
MunI	CAATTG	2 cut(s)	1815, 1887
Mva1269I	GAATGC	4 cut(s)	77, 748, 1063, 1371
MvaI	CCWGG	5 cut(s)	268, 1188, 2402, 2450, 2914
MvnI	CGCG	4 cut(s)	99, 242, 353, 671
MwoI	GCNNNNNNNGC	8 cut(s)	190, 205, 389, 398, 580, 983, 2246, 2667
NaeI	GCCGGC	1 cut(s)	1263
NciI	CCSGG	2 cut(s)	486, 2227
NcoI	CCATGG	3 cut(s)	1524, 2214, 2924
NdeI	CATATG	1 cut(s)	1272
NgoMIV	GCCGGC	1 cut(s)	1261
NlaIV	GGNNCC	6 cut(s)	456, 522, 1630, 1860, 2464, 2930
NmeAIII	GCCGAG	1 cut(s)	1104
NmuCI	GTSAC	6 cut(s)	301, 709, 1511, 1880, 2680, 2789
NspI	RCATGY	1 cut(s)	703
PagI	TCATGA	2 cut(s)	760, 1681
PaqCI	CACCTGC	2 cut(s)	733, 2191
PasI	CCCWGGG	2 cut(s)	2401, 2913
PceI	AGGCCT	4 cut(s)	401, 1186, 2076, 2819
PcsI	WCGNNNNNNNCGW	6 cut(s)	110, 153, 219, 270, 279, 288
PctI	GAATGC	4 cut(s)	77, 748, 1063, 1371
PdiI	GCCGGC	1 cut(s)	1263
PfeI	GAWTC	9 cut(s)	229, 363, 412, 757, 988, 1418, 1911, 2422, 2484
PfoI	TCCNGGA	1 cut(s)	484
Ple19I	CGATCG	1 cut(s)	357
PleI	GAGTC	9 cut(s)	46, 515, 706, 1084, 1126, 1186, 1418, 2531, 3113
PpsI	GAGTC	9 cut(s)	46, 515, 706, 1084, 1126, 1186, 1418, 2531, 3113
PpuMI	RGGWCCY	1 cut(s)	1732
Psp124BI	GAGCTC	2 cut(s)	480, 557
Psp5II	RGGWCCY	1 cut(s)	1732
Psp6I	CCWGG	5 cut(s)	266, 1186, 2400, 2448, 2912
PspFI	CCCAGC	2 cut(s)	891, 2467
PspGI	CCWGG	5 cut(s)	266, 1186, 2400, 2448, 2912
PspN4I	GGNNCC	6 cut(s)	456, 522, 1630, 1860, 2464, 2930
PspPI	GGNCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
PspPPI	RGGWCCY	1 cut(s)	1732
PstI	CTGCAG	1 cut(s)	1009
PsuI	RGATCY	6 cut(s)	1302, 1660, 1858, 2312, 2556, 2756
PvuI	CGATCG	1 cut(s)	357
PvuII	CAGCTG	4 cut(s)	891, 1952, 2396, 2753
RseI	CAYNNNNRTG	3 cut(s)	1275, 2040, 2855
SacI	GAGCTC	2 cut(s)	480, 557
SaqAI	TTAA	5 cut(s)	1794, 2015, 2802, 2919, 3068
Sau96I	GGNCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
SchI	GAGTC	9 cut(s)	47, 516, 706, 1084, 1126, 1186, 1419, 2531, 3113
ScrFI	CCNGG	7 cut(s)	268, 486, 1188, 2227, 2402, 2450, 2914
SduI	GDGCHC	4 cut(s)	480, 557, 2717, 2769
SexAI	ACCWGGT	1 cut(s)	2448
SfaNI	GCATC	4 cut(s)	1267, 1312, 2167, 2747
SfcI	CTRYAG	3 cut(s)	1005, 2286, 2472
SinI	GGWCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
SmiMI	CAYNNNNRTG	3 cut(s)	1275, 2040, 2855
SmlI	CTYRAG	3 cut(s)	1499, 2994, 3083
SmoI	CTYRAG	3 cut(s)	1499, 2994, 3083
SpeI	ACTAGT	2 cut(s)	1430, 1694
SseBI	AGGCCT	4 cut(s)	401, 1186, 2076, 2819
SspMI	CTAG	6 cut(s)	1431, 1695, 2088, 2523, 2696, 3108
SstI	GAGCTC	2 cut(s)	480, 557
StuI	AGGCCT	4 cut(s)	401, 1186, 2076, 2819
StyD4I	CCNGG	7 cut(s)	266, 484, 1186, 2225, 2400, 2448, 2912
StyI	CCWWGG	4 cut(s)	1524, 2099, 2214, 2924
TaaI	ACNGT	6 cut(s)	562, 682, 1108, 1511, 2605, 2891
TaiI	ACGT	4 cut(s)	66, 303, 1479, 2982
TaqI	TCGA	9 cut(s)	56, 126, 315, 557, 936, 1198, 1212, 2822, 3072
TatI	WGTACW	4 cut(s)	944, 1100, 1460, 3101
TauI	GCSGC	8 cut(s)	99, 136, 245, 322, 431, 470, 986, 1261
TfiI	GAWTC	9 cut(s)	229, 363, 412, 757, 988, 1418, 1911, 2422, 2484
Tru1I	TTAA	5 cut(s)	1794, 2015, 2802, 2919, 3068
Tru9I	TTAA	5 cut(s)	1794, 2015, 2802, 2919, 3068
TscAI	CASTG	4 cut(s)	1014, 1366, 1455, 2554
TseFI	GTSAC	6 cut(s)	301, 709, 1511, 1880, 2680, 2789
TseI	GCWGC	6 cut(s)	1075, 1379, 1602, 1674, 2125, 2396
Tsp45I	GTSAC	6 cut(s)	301, 709, 1511, 1880, 2680, 2789
TspDTI	ATGAA	9 cut(s)	247, 740, 749, 1670, 1698, 1779, 2345, 2346, 3042
TspGWI	ACGGA	7 cut(s)	50, 746, 780, 1868, 1882, 1904, 2555
TspRI	CASTG	4 cut(s)	1014, 1366, 1455, 2554
VpaK11BI	GGWCC	5 cut(s)	1645, 1732, 1876, 1985, 2462
XagI	CCTNNNNNAGG	1 cut(s)	2882
XapI	RAATTY	7 cut(s)	83, 460, 634, 919, 1588, 1651, 2406
XbaI	TCTAGA	1 cut(s)	2087
XceI	RCATGY	1 cut(s)	703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1639
XmiI	GTMKAC	2 cut(s)	297, 1691
XspI	CTAG	6 cut(s)	1431, 1695, 2088, 2523, 2696, 3108
ZraI	GACGTC	1 cut(s)	301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.