Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0001873

Physical Location & Seq

Genomic Coordinates Forward (+)

8245075 .. 8250072

Gene Structure 4998 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g09870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3501 bp

ATGACGTGGAGCGACCTCGTCGGCTGTAGAAGAGGAATCTGTCCGCTCCACTTGAATCGCTCTTCAGATTCCCGATCGTGCGACACAAACAAAAACATCAGACAAGAGAAAAAAATAATAAAATTTGCTGTTGGAAAAGTCCAAATTTCCAAATTTCAGTTGGTCACACTCCCCGACAGAACCTCCACTTTTTTTTACTCTGTTTTTCTTCTCTCCAAATTTTCTCAGCTCCCAAACAGAAAGAAAGCTACAAATTTCCAGGTGATGAAGCGTGATCACATTGCCAGAAGGAAAAAGAAACTCGATCCCATGGGGAAAGAAGGGCAGAACTACGGGAAGGGAGAGAGTCCGAATCCGAATCCGATTCCGAAAGCCGATCACGCTTTCCCGGCGTGGTCGAGAGACGCCAAGGAATGCGAGGACGCGTTCCGAGTGAGTCGCGACTCGGGCTTGTCCTCCGAGGAAGTCGACAACCGGCGGAAGATGTACGGATGGAACGAGCTGGAGAAGCACGAGGACCAGTCGATGTGGAAGCTGTTGCTGGACCAGCTGAGCGACACGCTGGTGCGGATTCTGCTGGCGGCGGCGATCATCTCGTTTGTCCTGGCCTGGTTCGACGGCGAGGAGGAGAAGGAGATCACGGCGTTTGTGGAGCCGCTGGTGATTTTCCTGATCCTGATCGTGAATGCAATCGTCGGGATTTGGCAGGAGAGCAACGCGGAGAAGGCGCTGGAGGCGTTGAAGGAGATTCAGTCAGAGCAGGCGGCGGTAATTAGGGATGGAAGGAAGGTGTCGAATCTGGCGGCGAAGGAGCTGGTTCCGGGCGATATTGTGGAGCTGAGAGTTGGGGATAAGGTGCCGGCGGATATGAGGGTTTTGAACTTGGTGAGCTCGACGTTTAGAGTTGAGCAGGGGTCTTTGACAGGAGAGAGTGAGGCAGTGAGCAAGAGTGTGAAGGCGGTTTCGGAGAATTCGGATATTCAAGGGAAGAAATGTATGGTTTTTGCAGGGACGACTGTGGTGAATGGGCATTGTGTTTGTTTGGTGACGCAGATTGGGATGAAGACTGAGATTGGGCAAGTGCATTCCCAGATTCAAGAAGCTTCGCAGAGCGAGGATGATACCCCTCTTAAGAAGAAGCTGAATGAGTTTGGGGAGATTTTGACTATGATCATTGGTGTTATTTGTGCAATTGTTTGGCTCATCAATTTCAAGTACTTTCTCAGTTGGGAGATTGTTGATGGTTTGCCGACCAATTTTCAATTCTCATTCGAGAAGTGTACTTATTACTTCAAGATTGCAGTGGCATTGGCTGTGGCAGCCATTCCCGAAGGCTTGCCTGCCGTGATCACGACTTGTTTGGCGCTTGGAACACGAAAGATGGCTCAGAAGAATGCACTTGTTAGGAAGTTGCCGAGTGTTGAGACTCTCGGGTGCACTACTGTGATTTGTTCTGATAAAACTGGTACTCTGACTACCAATCAGATGGCTGTGGCAAAGCTTGTGGCTATTGGTTCGAGGCCTGGTACTCTTCGAGCCTTCGATGTGGAAGGAACCACCTACAACCCTTTTGATGGGAAAATACAGGACTGGCCGCCAGCTGGTGATATGGATACCAATGTTCAAATGATAGCCAAAATCGCTGCTGTGTGTAATGATGCTGGTGTTGAGTTATCTGGGAGTCATTATGTTGCCAACGGGATGCCTACCGAGGCAGCTTTGAAGGTTCTGGTTGAGAAGATGGGAGTTCCTGAAGTATTAAATACTTGTTTCTCCTCAGTTGGAGATCTACTACGTTGTTCTCAACTATGGAATGACATTGACCGGCGAATTGCAACACTTGAGTTTGACCGTGATCGCAAATCCATGAGTGTTATTGTGAATTCTGGCTCGGGAAAAAACTTACTTTTTGTTAAGGGTGCAGTTGAAAATGTATTGGAACGGAGCTGGTTCATTCAGTTGGTTGATGGCTCCATTGTAGAATTGGACCAAAAAATAAGGGATCTTATCTTGGGCACCCTTAATGAAATGTCAAGTAGTGCATTACGTTGTTTGGGGTTTGCATACAAGGGCGACCTCCCAGAGTTTGCAACGTACAATGGTGATGAAGATCATCCAGCTCATCAGCTTTTACTCAATCCTTCCAATTATTCTTCAATTGAGAATAAACTTGTTTTTGTTGGCATGGTCGGGCTAAGGGATCCTCCGCGAAAAGAGGTCCATCAAGCCATTGAGGACTGCAAAGCTGCCGGAATCCGTGTTATGGTTATTACAGGAGACAACAAGGATACTGCTGAAGCTATTTGCCGTGAAATAGGTGTATTCAAACCTTCAGAAGATATTAGTTTGAAAAGCTTAACAGGAAAAGAATTCATCGATCACCATGACCAGAAAAGTTATTTAAGAAAAAGTGGAGGCCTGTTGTTCTCTAGGGCTGAGCCAAGGCATAAACAAGAGATAGTGAGGCTGCTCAAGGAAGACGGGGAAGTGGTTGCAATGACTGGTGATGGAGTGAATGATGCACCTGCCTTGAAGTTGGCTGATATTGGGATTGCAATGGGCATCGCTGGGACAGAGGTTGCCAAGGAAGCCTCTGATATGGTATTAGCAGATGACAATTTTAGCACTATAGTTGCTGCTGTCGGAGAAGGCAGGTCTATTTACAACAACATGAAGGCTTTTATCAGGTACATGATCTCCTCAAACATTGGCGAAGTTGCATCCATTTTTCTGACAGCTGCCTTGGGTATTCCAGAAGGGATGATCCCAGTTCAGCTTCTATGGGTCAATCTGGTCACCGATGGACCCCCAGCAACAGCTTTGGGATTCAATCCACCGGACAAAGACATAATGAAGAAGCCCCCTAGAAGAAGCAACGAGTCGTTGATCACTCCTTGGATCTTATTCCGTTATCTGGTAATTGGGCTCTACGTCGGGACAGCAACAGTTGGGGTGTTCATTATTTGGTACACTCATTCCTCATTTTTGGGCATCGACCTTAGCCAAGACGGCCATAGTCTAGTGACCTACTCTCAACTTGCAAACTGGGGCAAGTGCCCTTCATGGGAAGGATTCTCACCATCCAACTTCACAGCCGGATCCCAGGTGTTCACTTTCGACACCAATCCATGCGAATATTTCCGTTCTGGAAAAATCAAAGCCTCGACTCTCTCCCTCTCCGTCTTGGTTGCCATCGAGATGTTCAACTCCCTCAATGCACTATCCGAGGACGGAAGCCTCTTGACAATGCCTCCCTGGGTCAATCCGTGGCTCCTTCTAGCCATGTCCTTGTCATTCGGCTTGCACTTTCTGATCCTCTACGTCCCGTTCCTTGCGGATGTCTTCGGCATTGTCCCTCTCAGCCTGAACGAATGGCTCTTGGTGCTGGCTGTCGCGCTTCCGGTGATCTTGATCGATGAGATTCTCAAGTTTGTGGGAAGATGTACGAGTAAGTTGCCGGATTCTACTACTATCGACAGATCTAAGCAAAAAGCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010042 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031984 GO:0034220 GO:0042175 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1167

Amino Acids

128.47

Weight (kDa)

5.85

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	132 - 199	3.2e-17	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	250 - 365	1e-23	P-type ATPase actuator domain
Cation_ATPase	PF13246	541 - 739	6e-38	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	727 - 848	2.1e-15	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	920 - 1145	1.3e-49	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07670 AT1G07670 AT1G07810
fragaria_vesca	FvH4_3g34570 FvH4_3g34570 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760
malus_domestica	MD04G1038900.v1.1 MD04G1116400.v1.1 MD11G1117700.v1.1 MD12G1132100.v1.1 MD13G1142700.v1.1
prunus_persica	Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1
pyrus_communis	pycom03g12390 pycom03g12400 pycom04g10640 pycom07g10780 pycom11g09870 pycom12g12810 pycom16g18850
rosa_chinensis	RchiOBHm_Chr3g0467981 RchiOBHm_Chr5g0062231
rosa_laevigata	RLG00000024462 RLG00000035545
rosa_multiflora	Rmu_co8021382.1_g000001 Rmu_sc0001793.1_g000060 Rmu_ssc0000409.1_g000035
rosa_roxburghii	Rroxscaffold_1G00018460 Rroxscaffold_6G00413240
rosa_rugosa	Rorug03G0090700 Rorug03G0090800 Rorug05G0347300
rosa_samantha	Rh3AG139600 Rh3BG161100 Rh3CG161000 Rh3DG161500 Rh5AG407900 Rh5BG421600 Rh5CG445600 Rh5DG436600
rosa_wichuraiana	Rw3G013200 Rw5G038440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2533
Acc36I	ACCTGC	2 cut(s)	2533, 2643
AccB1I	GGYRCC	2 cut(s)	856, 2015
AccBSI	CCGCTC	1 cut(s)	46
AccI	GTMKAC	1 cut(s)	468
AccII	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
AcoI	YGGCCR	2 cut(s)	1592, 3010
AcsI	RAATTY	8 cut(s)	122, 144, 152, 218, 253, 970, 1882, 2369
AcuI	CTGAAG	4 cut(s)	48, 1773, 2316, 2316
AcyI	GRCGYC	1 cut(s)	405
AfaI	GTAC	9 cut(s)	488, 1217, 1282, 1468, 1528, 2096, 2690, 2969, 3445
AfiI	CCNNNNNNNGG	5 cut(s)	1574, 1601, 2263, 2914, 3064
AflII	CTTAAG	1 cut(s)	1130
AflIII	ACRYGT	1 cut(s)	423
AjiI	CACGTC	1 cut(s)	6
AjnI	CCWGG	6 cut(s)	258, 603, 608, 1522, 3102, 3254
AjuI	GAANNNNNNNTTGG	2 cut(s)	1247, 1279
AleI	CACNNNNGTG	2 cut(s)	563, 1442
Alw21I	GWGCWC	2 cut(s)	893, 1439
Alw26I	GTCTC	3 cut(s)	396, 1418, 2271
Alw44I	GTGCAC	1 cut(s)	1435
Ama87I	CYCGRG	3 cut(s)	445, 1430, 1891
AoxI	GGCC	5 cut(s)	606, 1520, 1592, 2416, 3010
ApaLI	GTGCAC	1 cut(s)	1435
ApeKI	GCWGC	7 cut(s)	1319, 1643, 1715, 2246, 2467, 2636, 2738
ApoI	RAATTY	8 cut(s)	122, 144, 152, 218, 253, 970, 1882, 2369
AspLEI	GCGC	3 cut(s)	730, 1366, 3397
AspS9I	GGNCC	5 cut(s)	517, 544, 1987, 2218, 2804
AsuC2I	CCSGG	2 cut(s)	389, 822
AvaI	CYCGRG	3 cut(s)	445, 1430, 1891
AvaII	GGWCC	5 cut(s)	517, 544, 1987, 2218, 2804
BaeGI	GKGCMC	3 cut(s)	1439, 2018, 3059
BaeI	ACNNNNGTAYC	2 cut(s)	1605, 1638
BamHI	GGATCC	2 cut(s)	2200, 3098
BanI	GGYRCC	2 cut(s)	856, 2015
BanII	GRGCYC	2 cut(s)	893, 2928
BauI	CACGAG	1 cut(s)	512
BbsI	GAAGAC	3 cut(s)	1070, 2484, 3334
Bbv12I	GWGCWC	2 cut(s)	893, 1439
BbvI	GCAGC	7 cut(s)	1331, 1630, 1727, 2233, 2454, 2623, 2725
BceAI	ACGGC	5 cut(s)	634, 657, 1328, 2292, 3025
BcgI	CGANNNNNNTGC	2 cut(s)	3436, 3470
BciT130I	CCWGG	6 cut(s)	260, 605, 610, 1524, 3104, 3256
BciVI	GTATCC	2 cut(s)	1606, 2281
BclI	TGATCA	4 cut(s)	274, 1170, 1347, 2886
BcnI	CCSGG	2 cut(s)	389, 822
BcoDI	GTCTC	3 cut(s)	396, 1418, 2271
BfaI	CTAG	4 cut(s)	2430, 2865, 3020, 3278
BfmI	CTRYAG	2 cut(s)	25, 2628
BfoI	RGCGCY	2 cut(s)	731, 1367
BfrI	CTTAAG	1 cut(s)	1130
BfuAI	ACCTGC	2 cut(s)	2533, 2643
BfuI	GTATCC	2 cut(s)	1606, 2281
BglI	GCCNNNNNGGC	1 cut(s)	3009
BglII	AGATCT	2 cut(s)	1786, 3479
BlpI	GCTNAGC	2 cut(s)	551, 2436
BmcAI	AGTACT	1 cut(s)	1217
Bme1390I	CCNGG	8 cut(s)	260, 389, 605, 610, 822, 1524, 3104, 3256
Bme18I	GGWCC	5 cut(s)	517, 544, 1987, 2218, 2804
BmeT110I	CYCGRG	3 cut(s)	445, 1430, 1891
BmgBI	CACGTC	1 cut(s)	6
BmgT120I	GGNCC	5 cut(s)	517, 544, 1987, 2218, 2804
BmrFI	CCNGG	8 cut(s)	260, 389, 605, 610, 822, 1524, 3104, 3256
BmrI	ACTGGG	2 cut(s)	2762, 3055
BmsI	GCATC	6 cut(s)	1648, 1692, 2509, 2571, 2729, 3000
BmuI	ACTGGG	2 cut(s)	2762, 3055
BpiI	GAAGAC	3 cut(s)	1070, 2484, 3334
BpmI	CTGGAG	2 cut(s)	524, 752
Bpu10I	CCTNAGC	2 cut(s)	2195, 2999
Bpu1102I	GCTNAGC	2 cut(s)	551, 2436
BpuEI	CTTGAG	3 cut(s)	1862, 2456, 3410
BpuMI	CCSGG	2 cut(s)	389, 822
Bsa29I	ATCGAT	2 cut(s)	2376, 3414
BsaBI	GATNNNNATC	3 cut(s)	677, 2109, 3410
BsaHI	GRCGYC	1 cut(s)	405
BsaWI	WCCGGW	2 cut(s)	2836, 3400
BsaXI	ACNNNNNCTCC	8 cut(s)	167, 197, 737, 767, 2681, 2711, 3235, 3265
Bsc4I	CCNNNNNNNGG	5 cut(s)	1574, 1601, 2263, 2914, 3064
Bse118I	RCCGGY	3 cut(s)	474, 859, 1824
Bse1I	ACTGG	6 cut(s)	520, 1468, 1595, 2506, 2768, 3050
Bse3DI	GCAATG	3 cut(s)	279, 2502, 2562
Bse8I	GATNNNNATC	3 cut(s)	677, 2109, 3410
BseBI	CCWGG	6 cut(s)	260, 605, 610, 1524, 3104, 3256
BseCI	ATCGAT	2 cut(s)	2376, 3414
BseJI	GATNNNNATC	3 cut(s)	677, 2109, 3410
BseLI	CCNNNNNNNGG	5 cut(s)	1574, 1601, 2263, 2914, 3064
BseMI	GCAATG	3 cut(s)	279, 2502, 2562
BseMII	CTCAG	9 cut(s)	239, 542, 830, 1059, 1237, 1400, 1791, 2427, 3373
BseNI	ACTGG	6 cut(s)	520, 1468, 1595, 2506, 2768, 3050
BseRI	GAGGAG	4 cut(s)	638, 641, 1765, 2689
BseSI	GKGCMC	3 cut(s)	1439, 2018, 3059
BseXI	GCAGC	7 cut(s)	1331, 1630, 1727, 2233, 2454, 2623, 2725
BseYI	CCCAGC	2 cut(s)	2567, 2809
BsgI	GTGCAG	1 cut(s)	1941
Bsh1236I	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	5 cut(s)	608, 1522, 1594, 2418, 3012
BshNI	GGYRCC	2 cut(s)	856, 2015
BshVI	ATCGAT	2 cut(s)	2376, 3414
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	2 cut(s)	893, 1439
BsiHKCI	CYCGRG	3 cut(s)	445, 1430, 1891
BslFI	GGGAC	5 cut(s)	1024, 2584, 2950, 3308, 3338
BslI	CCNNNNNNNGG	5 cut(s)	1574, 1601, 2263, 2914, 3064
BsmAI	GTCTC	3 cut(s)	396, 1418, 2271
BsmBI	CGTCTC	1 cut(s)	396
BsmFI	GGGAC	5 cut(s)	1024, 2584, 2950, 3308, 3338
BsmI	GAATGC	4 cut(s)	419, 691, 1084, 1399
BsnI	GGCC	5 cut(s)	608, 1522, 1594, 2418, 3012
BsoBI	CYCGRG	3 cut(s)	445, 1430, 1891
Bsp1286I	GDGCHC	5 cut(s)	893, 1439, 2018, 2928, 3059
Bsp1720I	GCTNAGC	2 cut(s)	551, 2436
Bsp19I	CCATGG	1 cut(s)	309
Bsp68I	TCGCGA	1 cut(s)	441
BspANI	GGCC	5 cut(s)	608, 1522, 1594, 2418, 3012
BspCNI	CTCAG	9 cut(s)	238, 543, 831, 1060, 1236, 1399, 1790, 2428, 3372
BspDI	ATCGAT	2 cut(s)	2376, 3414
BspFNI	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
BspMI	ACCTGC	2 cut(s)	2533, 2643
BspQI	GCTCTTC	1 cut(s)	67
BspT107I	GGYRCC	2 cut(s)	856, 2015
BspTI	CTTAAG	1 cut(s)	1130
BsrBI	CCGCTC	1 cut(s)	46
BsrDI	GCAATG	3 cut(s)	279, 2502, 2562
BsrFI	RCCGGY	3 cut(s)	474, 859, 1824
BsrI	ACTGG	6 cut(s)	520, 1468, 1595, 2506, 2768, 3050
BssAI	RCCGGY	3 cut(s)	474, 859, 1824
BssNI	GRCGYC	1 cut(s)	405
BssSI	CACGAG	1 cut(s)	512
BssT1I	CCWWGG	6 cut(s)	309, 408, 2441, 2583, 2742, 2894
Bst2BI	CACGAG	1 cut(s)	512
Bst2UI	CCWGG	6 cut(s)	260, 605, 610, 1524, 3104, 3256
Bst4CI	ACNGT	4 cut(s)	1018, 1444, 1853, 2947
Bst6I	CTCTTC	3 cut(s)	25, 67, 1536
BstACI	GRCGYC	1 cut(s)	405
BstAFI	CTTAAG	1 cut(s)	1130
BstC8I	GCNNGC	8 cut(s)	579, 762, 861, 1337, 1341, 1599, 3302, 3387
BstDSI	CCRYGG	2 cut(s)	309, 3266
BstEII	GGTNACC	1 cut(s)	2794
BstFNI	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
BstH2I	RGCGCY	2 cut(s)	731, 1367
BstHHI	GCGC	3 cut(s)	730, 1366, 3397
BstMAI	GTCTC	3 cut(s)	396, 1418, 2271
BstMCI	CGRYCG	1 cut(s)	77
BstNI	CCWGG	6 cut(s)	260, 605, 610, 1524, 3104, 3256
BstPI	GGTNACC	1 cut(s)	2794
BstSCI	CCNGG	8 cut(s)	258, 387, 603, 608, 820, 1522, 3102, 3254
BstSFI	CTRYAG	2 cut(s)	25, 2628
BstSLI	GKGCMC	3 cut(s)	1439, 2018, 3059
BstUI	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
BstV1I	GCAGC	7 cut(s)	1331, 1630, 1727, 2233, 2454, 2623, 2725
BstV2I	GAAGAC	3 cut(s)	1070, 2484, 3334
BstX2I	RGATCY	6 cut(s)	1786, 2002, 2200, 2898, 3098, 3479
BstXI	CCANNNNNNTGG	1 cut(s)	1486
BstYI	RGATCY	6 cut(s)	1786, 2002, 2200, 2898, 3098, 3479
Bsu15I	ATCGAT	2 cut(s)	2376, 3414
BsuI	GTATCC	2 cut(s)	1606, 2281
BsuRI	GGCC	5 cut(s)	608, 1522, 1594, 2418, 3012
BsuTUI	ATCGAT	2 cut(s)	2376, 3414
BtgI	CCRYGG	2 cut(s)	309, 3266
BtgZI	GCGATG	1 cut(s)	2548
BtrI	CACGTC	1 cut(s)	6
BtsI	GCAGTG	2 cut(s)	945, 1308
BtsIMutI	CAGTG	2 cut(s)	945, 1308
BtuMI	TCGCGA	1 cut(s)	441
BveI	ACCTGC	2 cut(s)	2533, 2643
Cac8I	GCNNGC	8 cut(s)	579, 762, 861, 1337, 1341, 1599, 3302, 3387
CfoI	GCGC	3 cut(s)	730, 1366, 3397
Cfr10I	RCCGGY	3 cut(s)	474, 859, 1824
Cfr13I	GGNCC	5 cut(s)	517, 544, 1987, 2218, 2804
ClaI	ATCGAT	2 cut(s)	2376, 3414
CseI	GACGC	3 cut(s)	413, 431, 1057
Csp6I	GTAC	9 cut(s)	487, 1216, 1281, 1467, 1527, 2095, 2689, 2968, 3444
CspCI	CAANNNNNGTGG	2 cut(s)	1485, 1520
CviAII	CATG	9 cut(s)	310, 1867, 2185, 2384, 2671, 2692, 3063, 3129, 3283
CviQI	GTAC	9 cut(s)	487, 1216, 1281, 1467, 1527, 2095, 2689, 2968, 3444
EaeI	YGGCCR	2 cut(s)	1592, 3010
Eam1104I	CTCTTC	3 cut(s)	25, 67, 1536
EarI	CTCTTC	3 cut(s)	25, 67, 1536
EciI	GGCGGA	2 cut(s)	493, 878
Ecl136II	GAGCTC	1 cut(s)	891
Eco130I	CCWWGG	6 cut(s)	309, 408, 2441, 2583, 2742, 2894
Eco147I	AGGCCT	2 cut(s)	1522, 2418
Eco24I	GRGCYC	2 cut(s)	893, 2928
Eco47I	GGWCC	5 cut(s)	517, 544, 1987, 2218, 2804
Eco53kI	GAGCTC	1 cut(s)	891
Eco57I	CTGAAG	4 cut(s)	48, 1773, 2316, 2316
Eco88I	CYCGRG	3 cut(s)	445, 1430, 1891
Eco91I	GGTNACC	1 cut(s)	2794
EcoICRI	GAGCTC	1 cut(s)	891
EcoO65I	GGTNACC	1 cut(s)	2794
EcoRI	GAATTC	3 cut(s)	970, 1882, 2369
EcoRII	CCWGG	6 cut(s)	258, 603, 608, 1522, 3102, 3254
EcoT14I	CCWWGG	6 cut(s)	309, 408, 2441, 2583, 2742, 2894
EcoT38I	GRGCYC	2 cut(s)	893, 2928
ErhI	CCWWGG	6 cut(s)	309, 408, 2441, 2583, 2742, 2894
Esp3I	CGTCTC	1 cut(s)	396
FaeI	CATG	9 cut(s)	313, 1870, 2188, 2387, 2674, 2695, 3066, 3132, 3286
FaqI	GGGAC	5 cut(s)	1024, 2584, 2950, 3308, 3338
FatI	CATG	9 cut(s)	309, 1866, 2184, 2383, 2670, 2691, 3062, 3128, 3282
FbaI	TGATCA	4 cut(s)	274, 1170, 1347, 2886
FblI	GTMKAC	1 cut(s)	468
FriOI	GRGCYC	2 cut(s)	893, 2928
FspBI	CTAG	4 cut(s)	2430, 2865, 3020, 3278
GlaI	GCGC	3 cut(s)	729, 1365, 3396
GsaI	CCCAGC	2 cut(s)	2571, 2813
GsuI	CTGGAG	2 cut(s)	524, 752
HaeII	RGCGCY	2 cut(s)	731, 1367
HaeIII	GGCC	5 cut(s)	608, 1522, 1594, 2418, 3012
HgaI	GACGC	3 cut(s)	413, 431, 1057
HhaI	GCGC	3 cut(s)	730, 1366, 3397
Hin1I	GRCGYC	1 cut(s)	405
Hin1II	CATG	9 cut(s)	313, 1870, 2188, 2387, 2674, 2695, 3066, 3132, 3286
Hin6I	GCGC	3 cut(s)	728, 1364, 3395
HinP1I	GCGC	3 cut(s)	728, 1364, 3395
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	3 cut(s)	1101, 1499, 2353
Hpy166II	GTNNAC	5 cut(s)	469, 1281, 1437, 2970, 3111
Hpy8I	GTNNAC	5 cut(s)	469, 1281, 1437, 2970, 3111
Hpy99I	CGWCG	5 cut(s)	23, 620, 698, 898, 2936
HpyCH4III	ACNGT	4 cut(s)	1018, 1444, 1853, 2947
HpyCH4IV	ACGT	7 cut(s)	5, 896, 1795, 2047, 2093, 2931, 3321
HpySE526I	ACGT	7 cut(s)	5, 896, 1795, 2047, 2093, 2931, 3321
Hsp92I	GRCGYC	1 cut(s)	405
Hsp92II	CATG	9 cut(s)	313, 1870, 2188, 2387, 2674, 2695, 3066, 3132, 3286
HspAI	GCGC	3 cut(s)	728, 1364, 3395
KroI	GCCGGC	1 cut(s)	859
KroNI	GCCGGC	1 cut(s)	861
Ksp22I	TGATCA	4 cut(s)	274, 1170, 1347, 2886
LguI	GCTCTTC	1 cut(s)	67
LmnI	GCTCC	9 cut(s)	9, 51, 234, 652, 811, 835, 1944, 1976, 3276
Lsp1109I	GCAGC	7 cut(s)	1331, 1630, 1727, 2233, 2454, 2623, 2725
LweI	GCATC	6 cut(s)	1648, 1692, 2509, 2571, 2729, 3000
MaeI	CTAG	4 cut(s)	2430, 2865, 3020, 3278
MaeII	ACGT	7 cut(s)	5, 896, 1795, 2047, 2093, 2931, 3321
MaeIII	GTNAC	4 cut(s)	163, 1045, 2794, 3022
MbiI	CCGCTC	1 cut(s)	46
MfeI	CAATTG	2 cut(s)	1191, 2157
MflI	RGATCY	6 cut(s)	1786, 2002, 2200, 2898, 3098, 3479
MhlI	GDGCHC	5 cut(s)	893, 1439, 2018, 2928, 3059
MluI	ACGCGT	1 cut(s)	423
MlyI	GAGTC	7 cut(s)	355, 437, 445, 1420, 1690, 2888, 3160
MmeI	TCCRAC	4 cut(s)	112, 1762, 2623, 3108
MroNI	GCCGGC	1 cut(s)	859
MseI	TTAA	6 cut(s)	1131, 1760, 1914, 2022, 2357, 2402
MslI	CAYNNNNRTG	3 cut(s)	563, 1442, 3197
MspA1I	CMGCKG	4 cut(s)	550, 658, 1601, 2738
MspCI	CTTAAG	1 cut(s)	1130
MspR9I	CCNGG	8 cut(s)	260, 389, 605, 610, 822, 1524, 3104, 3256
MunI	CAATTG	2 cut(s)	1191, 2157
Mva1269I	GAATGC	4 cut(s)	419, 691, 1084, 1399
MvaI	CCWGG	6 cut(s)	260, 605, 610, 1524, 3104, 3256
MvnI	CGCG	5 cut(s)	425, 441, 719, 2209, 3395
NaeI	GCCGGC	1 cut(s)	861
NciI	CCSGG	2 cut(s)	389, 822
NcoI	CCATGG	1 cut(s)	309
NgoMIV	GCCGGC	1 cut(s)	859
NlaIII	CATG	9 cut(s)	313, 1870, 2188, 2387, 2674, 2695, 3066, 3132, 3286
NmeAIII	GCCGAG	1 cut(s)	1440
NmuCI	GTSAC	4 cut(s)	163, 1045, 2794, 3022
NruI	TCGCGA	1 cut(s)	441
OliI	CACNNNNGTG	2 cut(s)	563, 1442
PaqCI	CACCTGC	1 cut(s)	2533
PasI	CCCWGGG	1 cut(s)	3255
PceI	AGGCCT	2 cut(s)	1522, 2418
PciSI	GCTCTTC	1 cut(s)	67
PcsI	WCGNNNNNNNCGW	1 cut(s)	495
PctI	GAATGC	4 cut(s)	419, 691, 1084, 1399
PdiI	GCCGGC	1 cut(s)	861
PflFI	GACNNNGTC	1 cut(s)	17
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	7 cut(s)	354, 437, 444, 1420, 1689, 2887, 3160
PpsI	GAGTC	7 cut(s)	354, 437, 444, 1420, 1689, 2887, 3160
Psp124BI	GAGCTC	1 cut(s)	893
Psp6I	CCWGG	6 cut(s)	258, 603, 608, 1522, 3102, 3254
PspEI	GGTNACC	1 cut(s)	2794
PspFI	CCCAGC	2 cut(s)	2567, 2809
PspGI	CCWGG	6 cut(s)	258, 603, 608, 1522, 3102, 3254
PspPI	GGNCC	5 cut(s)	517, 544, 1987, 2218, 2804
PsuI	RGATCY	6 cut(s)	1786, 2002, 2200, 2898, 3098, 3479
PsyI	GACNNNGTC	1 cut(s)	17
PvuI	CGATCG	1 cut(s)	77
PvuII	CAGCTG	3 cut(s)	550, 1601, 2738
RruI	TCGCGA	1 cut(s)	441
RsaI	GTAC	9 cut(s)	488, 1217, 1282, 1468, 1528, 2096, 2690, 2969, 3445
RsaNI	GTAC	9 cut(s)	487, 1216, 1281, 1467, 1527, 2095, 2689, 2968, 3444
RseI	CAYNNNNRTG	3 cut(s)	563, 1442, 3197
SacI	GAGCTC	1 cut(s)	893
SalI	GTCGAC	1 cut(s)	467
SapI	GCTCTTC	1 cut(s)	67
SaqAI	TTAA	6 cut(s)	1131, 1760, 1914, 2022, 2357, 2402
Sau96I	GGNCC	5 cut(s)	517, 544, 1987, 2218, 2804
ScaI	AGTACT	1 cut(s)	1217
SchI	GAGTC	7 cut(s)	355, 437, 445, 1420, 1690, 2888, 3160
ScrFI	CCNGG	8 cut(s)	260, 389, 605, 610, 822, 1524, 3104, 3256
SduI	GDGCHC	5 cut(s)	893, 1439, 2018, 2928, 3059
SfaNI	GCATC	6 cut(s)	1648, 1692, 2509, 2571, 2729, 3000
SfcI	CTRYAG	2 cut(s)	25, 2628
SinI	GGWCC	5 cut(s)	517, 544, 1987, 2218, 2804
SmiMI	CAYNNNNRTG	3 cut(s)	563, 1442, 3197
SmlI	CTYRAG	4 cut(s)	1130, 1841, 2471, 3425
SmoI	CTYRAG	4 cut(s)	1130, 1841, 2471, 3425
SseBI	AGGCCT	2 cut(s)	1522, 2418
SspI	AATATT	1 cut(s)	3137
SspMI	CTAG	4 cut(s)	2430, 2865, 3020, 3278
SstI	GAGCTC	1 cut(s)	893
StuI	AGGCCT	2 cut(s)	1522, 2418
StyD4I	CCNGG	8 cut(s)	258, 387, 603, 608, 820, 1522, 3102, 3254
StyI	CCWWGG	6 cut(s)	309, 408, 2441, 2583, 2742, 2894
TaaI	ACNGT	4 cut(s)	1018, 1444, 1853, 2947
TaiI	ACGT	7 cut(s)	8, 899, 1798, 2050, 2096, 2934, 3324
TatI	WGTACW	2 cut(s)	1215, 1280
TauI	GCSGC	6 cut(s)	584, 587, 658, 767, 806, 1597
Tru1I	TTAA	6 cut(s)	1131, 1760, 1914, 2022, 2357, 2402
Tru9I	TTAA	6 cut(s)	1131, 1760, 1914, 2022, 2357, 2402
TscAI	CASTG	2 cut(s)	945, 1308
TseFI	GTSAC	4 cut(s)	163, 1045, 2794, 3022
TseI	GCWGC	7 cut(s)	1319, 1643, 1715, 2246, 2467, 2636, 2738
Tsp45I	GTSAC	4 cut(s)	163, 1045, 2794, 3022
TspGWI	ACGGA	8 cut(s)	504, 1957, 2246, 2897, 3131, 3169, 3246, 3255
TspRI	CASTG	2 cut(s)	945, 1308
Tth111I	GACNNNGTC	1 cut(s)	17
Vha464I	CTTAAG	1 cut(s)	1130
VneI	GTGCAC	1 cut(s)	1435
VpaK11BI	GGWCC	5 cut(s)	517, 544, 1987, 2218, 2804
XapI	RAATTY	8 cut(s)	122, 144, 152, 218, 253, 970, 1882, 2369
XcmI	CCANNNNNNNNNTGG	2 cut(s)	157, 1981
XmiI	GTMKAC	1 cut(s)	468
XspI	CTAG	4 cut(s)	2430, 2865, 3020, 3278
ZrmI	AGTACT	1 cut(s)	1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.