Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001873

Physical Location & Seq

Genomic Coordinates Forward (+)

22646562 .. 22651564

Gene Structure 5003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00018460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGCGAGGACGAGTTCAAGGTCAGCCGCGACTCGGGGCTGTCGTCGGAGGAAGTCGAGAAGCGCCGGGGGTGTACGGATGGAACGAACTGGAGAAGCACGAGGACCAGTCGATCCTGAAGCTCCTGATGGATCAGCTGAGCGACACGCTCGTCAGGGTTCTGTTGTTCGCGGCGGTTATCTCCTTCGTTCTCGCATGGTACGAAGGCGAGGAGACCGGCGAGATGGACATCACGGCGTTCGTGGAGCCGTTGGTGATCTTTCTGATCCTGATCGTGAATGCGATCGTCGGAATCTGGCAGGAGAGCAACGCCGAGAAGGCGCTGGAGGCCTTGAAGGAGATTCAGTCGGAGCAGGCGGCGGTGGTGAGGGACGGGAAGAAGGTGCCGAATTTGGCGGCGAAGGAGCTCGTTCCGGGAGATATTGTGGAGCTGAGAGTCGGCGATAAGGTTCCGGCGGATATGAGGGTTTTGAGTTTGGTGAGCTCGACGGTGAGGATCGAGCAAGGGTCGTTGACCGGAGAGAGTGAGGCGGTTAGCAAGACGGCGAAGGCGGTGGCGGAGAATTCGGACATTCAGGGGAAGAAGTGTATGGTTTTCGCGGGAACGACGGTGGTGAACGGGAATTGCATGTGTTTGGTGACTCAGATTGGGATGAAGACGGAGATAGGGCAGGTGCATTCTCAGATTCAGGAGGCTTCACAGAGTGAGGAAGATACTCCGTTGAAGAAGAAGTTGAATGAGTTTGGGGAGATTTTGACTGCTATAATTGGTGTCATTTGTGCTTTGGTTTGGTTGATCAATCTCAAGTACTTTCTCAGTTGGGAAATGGTTGATGGGAGGCCGACGAATTTCGAATTTTCGTTCGAGAGGTGTACTTATTACTTCAAGATTGCTGTGGCATTGGCCGTGGCGGCGATTCCAGAAGGCTTGCCTGCAGTGATTACCACCTGCTTGGCACTTGGGACGAGGAAGATGGCTCAGAAGAATGCACTTGTTAGGAAGCTGCCGAGTGTGGAGACTCTTGGTTGTACTACTGTGATTTGTTCTGATAAGACCGGTACTCTGACTACTAATCAGATGGCTGTGTCTAAGCTTGTAGCTATTGGTACTAGGCCTGGTACTCTTCGAGCCTTTGATGTTGAGGGAACCACATACAACCCTTCTGATGGGAAAATACCAGACTGGCCGCCGGCTGGTCATATGGATACCAATGTTCAAATGATTGCGAAGATCTCTGCATTGTGTAATGATGCTGGTGTTGAATTGTCAGGGAGCCATTATGTTGCCAGTGGTATGCCCACAGAGGCAGCCTTGAAGGTTCTGGTTGAGAAGATGGGAGTTCCTGAATCACTCAATACTTGTTTCGATTCAGGTTCGAAGGATATATTGCGTTGTTCTACACTTTGGAAGGAAGTTGATCGCCGGATTGCAACACTTGAGTTTGACCGTGACCGCAAATCCATGGGTGTAATTGTGAATACTGGCGCCGGAAAGAACTCTCTTTATGTCAAGGGTGCAGTTGAAAATGTAGTGGAGCGAAGCTCATCCATTCAGTTGGTTGACGGCTCCATTGCAGAATTGGACCAAAATTTAAAAGATCTTATCTTAGGCAGCCTTCATGAAATGTCTAGTAGTGCATTGCGCTGTTTGGGGTTTGCATACAAGGAGGACCTGCCAGAGTTCGCAGGCTATAATGGTGATGAAGACCATCCAGCTCATCAGCTTTTACTTAATCCTTCCAACTACTCTTCAATTGAGAGTAAACTTGTTTTTGTTGGCTTTGTTGGGCTAAGGGATCCTCCACGAAAAGAGGTCCGTCAAGCAATTGAGGACTGCAAAACTGCTGGAATCCGTGTTATGGTTATTACGGGAGATAACAAGAATACAGCTGAAGCTATTTGCCGCGAAATAGGTGTATTTGGACCTTCTGAAAATATCAGTTCGAGAAGTTTAACAGGGAAAGAATTCATACATCACCATGATCAGAAAAATCATTTGAGACAACGTGGAGGCCTTCTGTTTTCTAGAGCTGAACCAAGGCATAAACAAGAGATAGTGAGGCTGCTGAAGGAAGATGGTGAAGTGGTTGCTATGACTGGTGATGGAGTGAATGATGCACCTGCCTTGAAGTTGGCTGACATTGGGATTGCCATGGGCATTGCTGGGACAGAGGTTGCAAAAGAGGCCTCTGATATGGTATTAGCAGATGACAATTTTAGCACCATAGTTTCTGCTGTTGGAGAAGGCAGATCTATTTACAACAACATGAAAGCTTTTATCAGGTACATGATTTCATCAAACATCGGTGAAGTTGCCTCCATTTTTCTGACAGCTGCCCTGGGAATTCCAGAAGGCATGATTCCAGTTCAGCTTCTGTGGGTCAACCTGGTGATTGGAGTCTACGTCGGTGTTGCAACAGTTGGGGTGTTCATTATCTGGTACACCCATTCCTCATTTTTGGGCATTGACCTTAGTGGAGATGGCCATAGTCTTGTGACCTACCATCAACTTGCAAACTGGCACAAGTGCACTTCTTGGGAGGGGTTTTCAGCATCTAACTTTACAGCTGGAACTCAGGTGTTCACCTTTGACACAGATCCATGTGAGTATTTCCATTCGGGCAAGATTAAAGCCTCAACTCTCTCCCTCTCAGTCTTGGTTGCCATTGAGATGTTCAACTCCCTCAATGCCCTGTCTGAGGACAGTAGCCTTCTGACGATGCCGCCCTGGGTTAATCCATGGCTCCTTCTTGCCATGTCTGTCTCCTTCGGCTTGCACTTTTTGATTCTCTATGTGCCATTCCTTGCTCAAGTGTTCGGCATTGTCCCCCTCAGCCTGAATGAATGGCTCTTGGTGTTGGCAGTTGCTTTTCCAGTTGTCTTAATTGATGAGGTGCTGAAGTTTGTAGGCAGATGTACAACTAAGTTGCCAGATTCCGCTGTAGAGAAATCCAAGCGCAAAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010042 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031984 GO:0034220 GO:0042175 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

989

Amino Acids

107.56

Weight (kDa)

5.33

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	24 - 61	2.1e-07	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	114 - 229	2.4e-23	P-type ATPase actuator domain
Cation_ATPase	PF13246	405 - 604	7.6e-37	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	592 - 713	2.1e-15	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	790 - 969	1e-22	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07670 AT1G07670 AT1G07810
fragaria_vesca	FvH4_3g34570 FvH4_3g34570 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760 FvH4_6g14760
malus_domestica	MD04G1038900.v1.1 MD04G1116400.v1.1 MD11G1117700.v1.1 MD12G1132100.v1.1 MD13G1142700.v1.1
prunus_persica	Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1 Prupe.6G246300_v2.0.a1
pyrus_communis	pycom03g12390 pycom03g12400 pycom04g10640 pycom07g10780 pycom11g09870 pycom12g12810 pycom16g18850
rosa_chinensis	RchiOBHm_Chr3g0467981 RchiOBHm_Chr5g0062231
rosa_laevigata	RLG00000024462 RLG00000035545
rosa_multiflora	Rmu_co8021382.1_g000001 Rmu_sc0001793.1_g000060 Rmu_ssc0000409.1_g000035
rosa_roxburghii	Rroxscaffold_1G00018460 Rroxscaffold_6G00413240
rosa_rugosa	Rorug03G0090700 Rorug03G0090800 Rorug05G0347300
rosa_samantha	Rh3AG139600 Rh3BG161100 Rh3CG161000 Rh3DG161500 Rh5AG407900 Rh5BG421600 Rh5CG445600 Rh5DG436600
rosa_wichuraiana	Rw3G013200 Rw5G038440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	661, 956, 2128
AasI	GACNNNNNNGTC	1 cut(s)	149
Acc36I	ACCTGC	4 cut(s)	661, 956, 1680, 2128
AccB1I	GGYRCC	2 cut(s)	382, 1484
AccI	GTMKAC	1 cut(s)	2400
AccII	CGCG	4 cut(s)	28, 170, 599, 1905
AclWI	GGATC	7 cut(s)	106, 138, 259, 503, 1790, 1803, 2591
AcoI	YGGCCR	3 cut(s)	903, 1184, 2482
AcsI	RAATTY	7 cut(s)	388, 562, 847, 854, 1588, 1964, 2343
AcuI	CTGAAG	4 cut(s)	137, 1911, 2087, 2918
AcyI	GRCGYC	1 cut(s)	1485
AdeI	CACNNNGTG	1 cut(s)	704
AfiI	CCNNNNNNNGG	5 cut(s)	32, 1166, 1193, 1858, 2698
AgeI	ACCGGT	1 cut(s)	1055
AjnI	CCWGG	4 cut(s)	1114, 2337, 2385, 2726
Alw21I	GWGCWC	3 cut(s)	408, 485, 2531
Alw26I	GTCTC	4 cut(s)	206, 1010, 1993, 2767
Alw44I	GTGCAC	1 cut(s)	2527
AlwI	GGATC	7 cut(s)	106, 138, 259, 503, 1790, 1803, 2591
AlwNI	CAGNNNCTG	1 cut(s)	2374
Ama87I	CYCGRG	1 cut(s)	32
AoxI	GGCC	8 cut(s)	327, 839, 903, 1112, 1184, 2011, 2184, 2482
ApaLI	GTGCAC	1 cut(s)	2527
ApeKI	GCWGC	5 cut(s)	1003, 1307, 1611, 2062, 2333
ApoI	RAATTY	7 cut(s)	388, 562, 847, 854, 1588, 1964, 2343
AsiGI	ACCGGT	1 cut(s)	1055
Asp700I	GAANNNNTTC	1 cut(s)	1964
AspLEI	GCGC	5 cut(s)	64, 322, 1487, 1644, 2958
AspS9I	GGNCC	5 cut(s)	103, 1582, 1669, 1813, 1922
AsuC2I	CCSGG	2 cut(s)	66, 414
AsuII	TTCGAA	2 cut(s)	852, 1376
AvaI	CYCGRG	1 cut(s)	32
AvaII	GGWCC	5 cut(s)	103, 1582, 1669, 1813, 1922
BaeGI	GKGCMC	1 cut(s)	2531
BaeI	ACNNNNGTAYC	2 cut(s)	1197, 1230
BalI	TGGCCA	1 cut(s)	2484
BamHI	GGATCC	1 cut(s)	1795
BanI	GGYRCC	2 cut(s)	382, 1484
BanII	GRGCYC	2 cut(s)	408, 485
BauI	CACGAG	1 cut(s)	98
BbsI	GAAGAC	2 cut(s)	662, 1710
Bbv12I	GWGCWC	3 cut(s)	408, 485, 2531
BbvCI	CCTCAGC	1 cut(s)	2831
BbvI	GCAGC	5 cut(s)	990, 1319, 1623, 2049, 2320
BceAI	ACGGC	5 cut(s)	232, 249, 558, 890, 1579
BciT130I	CCWGG	4 cut(s)	1116, 2339, 2387, 2728
BciVI	GTATCC	1 cut(s)	1198
BclI	TGATCA	2 cut(s)	795, 1981
BcnI	CCSGG	2 cut(s)	66, 414
BcoDI	GTCTC	4 cut(s)	206, 1010, 1993, 2767
BfaI	CTAG	3 cut(s)	1110, 1629, 2025
BfmI	CTRYAG	2 cut(s)	933, 2940
BfoI	RGCGCY	3 cut(s)	65, 323, 1488
BfuAI	ACCTGC	4 cut(s)	661, 956, 1680, 2128
BfuI	GTATCC	1 cut(s)	1198
BglI	GCCNNNNNGGC	2 cut(s)	317, 911
BglII	AGATCT	3 cut(s)	1230, 1597, 2249
BlpI	GCTNAGC	1 cut(s)	137
BmcAI	AGTACT	1 cut(s)	809
Bme1390I	CCNGG	6 cut(s)	66, 414, 1116, 2339, 2387, 2728
Bme18I	GGWCC	5 cut(s)	103, 1582, 1669, 1813, 1922
BmeT110I	CYCGRG	1 cut(s)	32
BmgT120I	GGNCC	5 cut(s)	103, 1582, 1669, 1813, 1922
BmiI	GGNNCC	9 cut(s)	246, 384, 450, 1147, 1274, 1486, 1567, 1797, 2744
BmrFI	CCNGG	6 cut(s)	66, 414, 1116, 2339, 2387, 2728
BmsI	GCATC	4 cut(s)	1240, 2104, 2561, 2709
BpiI	GAAGAC	2 cut(s)	662, 1710
BplI	GAGNNNNNCTC	2 cut(s)	1526, 1558
BpmI	CTGGAG	2 cut(s)	110, 344
Bpu10I	CCTNAGC	2 cut(s)	1790, 2831
Bpu1102I	GCTNAGC	1 cut(s)	137
Bpu14I	TTCGAA	2 cut(s)	852, 1376
BpuEI	CTTGAG	3 cut(s)	788, 1457, 2793
BpuMI	CCSGG	2 cut(s)	66, 414
BsaBI	GATNNNNATC	2 cut(s)	227, 269
BsaHI	GRCGYC	1 cut(s)	1485
BsaI	GGTCTC	1 cut(s)	206
BsaWI	WCCGGW	2 cut(s)	515, 1055
BsaXI	ACNNNNNCTCC	6 cut(s)	329, 359, 408, 438, 2388, 2418
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 1166, 1193, 1858, 2698
Bse118I	RCCGGY	3 cut(s)	215, 1055, 1189
Bse1I	ACTGG	9 cut(s)	93, 106, 1187, 1287, 1486, 2101, 2363, 2522, 2873
Bse3DI	GCAATG	3 cut(s)	1569, 1637, 2157
Bse8I	GATNNNNATC	2 cut(s)	227, 269
BseBI	CCWGG	4 cut(s)	1116, 2339, 2387, 2728
BseGI	GGATG	4 cut(s)	83, 657, 1544, 1708
BseJI	GATNNNNATC	2 cut(s)	227, 269
BseLI	CCNNNNNNNGG	5 cut(s)	32, 1166, 1193, 1858, 2698
BseMI	GCAATG	3 cut(s)	1569, 1637, 2157
BseNI	ACTGG	9 cut(s)	93, 106, 1187, 1287, 1486, 2101, 2363, 2522, 2873
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	1 cut(s)	2531
BseXI	GCAGC	5 cut(s)	990, 1319, 1623, 2049, 2320
BseYI	CCCAGC	1 cut(s)	2162
BsgI	GTGCAG	1 cut(s)	1536
Bsh1236I	CGCG	4 cut(s)	28, 170, 599, 1905
Bsh1285I	CGRYCG	1 cut(s)	285
BshFI	GGCC	8 cut(s)	329, 841, 905, 1114, 1186, 2013, 2186, 2484
BshNI	GGYRCC	2 cut(s)	382, 1484
BshTI	ACCGGT	1 cut(s)	1055
BsiEI	CGRYCG	1 cut(s)	285
BsiHKAI	GWGCWC	3 cut(s)	408, 485, 2531
BsiHKCI	CYCGRG	1 cut(s)	32
BsiSI	CCGG	9 cut(s)	65, 216, 413, 452, 516, 1056, 1190, 1423, 1488
BslFI	GGGAC	4 cut(s)	383, 976, 2179, 2810
BslI	CCNNNNNNNGG	5 cut(s)	32, 1166, 1193, 1858, 2698
BsmAI	GTCTC	4 cut(s)	206, 1010, 1993, 2767
BsmFI	GGGAC	4 cut(s)	383, 976, 2179, 2810
BsmI	GAATGC	3 cut(s)	283, 676, 991
BsnI	GGCC	8 cut(s)	329, 841, 905, 1114, 1186, 2013, 2186, 2484
Bso31I	GGTCTC	1 cut(s)	206
BsoBI	CYCGRG	1 cut(s)	32
Bsp119I	TTCGAA	2 cut(s)	852, 1376
Bsp1286I	GDGCHC	3 cut(s)	408, 485, 2531
Bsp1407I	TGTACA	1 cut(s)	2915
Bsp1720I	GCTNAGC	1 cut(s)	137
Bsp19I	CCATGG	3 cut(s)	1461, 2151, 2738
BspANI	GGCC	8 cut(s)	329, 841, 905, 1114, 1186, 2013, 2186, 2484
BspFNI	CGCG	4 cut(s)	28, 170, 599, 1905
BspHI	TCATGA	1 cut(s)	1618
BspLI	GGNNCC	9 cut(s)	246, 384, 450, 1147, 1274, 1486, 1567, 1797, 2744
BspMAI	CTGCAG	1 cut(s)	937
BspMI	ACCTGC	4 cut(s)	661, 956, 1680, 2128
BspPI	GGATC	7 cut(s)	106, 138, 259, 503, 1790, 1803, 2591
BspT104I	TTCGAA	2 cut(s)	852, 1376
BspT107I	GGYRCC	2 cut(s)	382, 1484
BspTNI	GGTCTC	1 cut(s)	206
BsrDI	GCAATG	3 cut(s)	1569, 1637, 2157
BsrFI	RCCGGY	3 cut(s)	215, 1055, 1189
BsrGI	TGTACA	1 cut(s)	2915
BsrI	ACTGG	9 cut(s)	93, 106, 1187, 1287, 1486, 2101, 2363, 2522, 2873
BssAI	RCCGGY	3 cut(s)	215, 1055, 1189
BssNI	GRCGYC	1 cut(s)	1485
BssSI	CACGAG	1 cut(s)	98
BssT1I	CCWWGG	4 cut(s)	1461, 2036, 2151, 2738
Bst2BI	CACGAG	1 cut(s)	98
Bst2UI	CCWGG	4 cut(s)	1116, 2339, 2387, 2728
Bst4CI	ACNGT	6 cut(s)	490, 610, 1036, 1448, 2419, 2705
Bst6I	CTCTTC	2 cut(s)	1128, 1753
BstACI	GRCGYC	1 cut(s)	1485
BstAUI	TGTACA	1 cut(s)	2915
BstBI	TTCGAA	2 cut(s)	852, 1376
BstC8I	GCNNGC	6 cut(s)	354, 929, 933, 1191, 1687, 2774
BstDSI	CCRYGG	4 cut(s)	906, 1461, 2151, 2738
BstENI	CCTNNNNNAGG	1 cut(s)	2696
BstF5I	GGATG	4 cut(s)	83, 657, 1544, 1708
BstFNI	CGCG	4 cut(s)	28, 170, 599, 1905
BstH2I	RGCGCY	3 cut(s)	65, 323, 1488
BstHHI	GCGC	5 cut(s)	64, 322, 1487, 1644, 2958
BstMAI	GTCTC	4 cut(s)	206, 1010, 1993, 2767
BstMCI	CGRYCG	1 cut(s)	285
BstMWI	GCNNNNNNNGC	4 cut(s)	317, 326, 911, 2183
BstNI	CCWGG	4 cut(s)	1116, 2339, 2387, 2728
BstNSI	RCATGY	1 cut(s)	631
BstSCI	CCNGG	6 cut(s)	64, 412, 1114, 2337, 2385, 2726
BstSFI	CTRYAG	2 cut(s)	933, 2940
BstSLI	GKGCMC	1 cut(s)	2531
BstUI	CGCG	4 cut(s)	28, 170, 599, 1905
BstV1I	GCAGC	5 cut(s)	990, 1319, 1623, 2049, 2320
BstV2I	GAAGAC	2 cut(s)	662, 1710
BstX2I	RGATCY	5 cut(s)	1230, 1597, 1795, 2249, 2596
BstXI	CCANNNNNNTGG	2 cut(s)	952, 1555
BstYI	RGATCY	5 cut(s)	1230, 1597, 1795, 2249, 2596
BsuI	GTATCC	1 cut(s)	1198
BsuRI	GGCC	8 cut(s)	329, 841, 905, 1114, 1186, 2013, 2186, 2484
BtgI	CCRYGG	4 cut(s)	906, 1461, 2151, 2738
BtsCI	GGATG	4 cut(s)	83, 657, 1544, 1708
BtsI	GCAGTG	1 cut(s)	942
BtsIMutI	CAGTG	2 cut(s)	942, 1294
BveI	ACCTGC	4 cut(s)	661, 956, 1680, 2128
Cac8I	GCNNGC	6 cut(s)	354, 929, 933, 1191, 1687, 2774
CaiI	CAGNNNCTG	1 cut(s)	2374
CciI	TCATGA	1 cut(s)	1618
CfoI	GCGC	5 cut(s)	64, 322, 1487, 1644, 2958
Cfr10I	RCCGGY	3 cut(s)	215, 1055, 1189
Cfr13I	GGNCC	5 cut(s)	103, 1582, 1669, 1813, 1922
CsiI	ACCWGGT	1 cut(s)	2385
CspAI	ACCGGT	1 cut(s)	1055
DinI	GGCGCC	1 cut(s)	1486
DraI	TTTAAA	1 cut(s)	1593
DraIII	CACNNNGTG	1 cut(s)	704
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	3 cut(s)	903, 1184, 2482
Eam1104I	CTCTTC	2 cut(s)	1128, 1753
EarI	CTCTTC	2 cut(s)	1128, 1753
EciI	GGCGGA	2 cut(s)	470, 572
Ecl136II	GAGCTC	2 cut(s)	406, 483
Eco130I	CCWWGG	4 cut(s)	1461, 2036, 2151, 2738
Eco147I	AGGCCT	4 cut(s)	329, 1114, 2013, 2186
Eco24I	GRGCYC	2 cut(s)	408, 485
Eco31I	GGTCTC	1 cut(s)	206
Eco47I	GGWCC	5 cut(s)	103, 1582, 1669, 1813, 1922
Eco53kI	GAGCTC	2 cut(s)	406, 483
Eco57I	CTGAAG	4 cut(s)	137, 1911, 2087, 2918
Eco88I	CYCGRG	1 cut(s)	32
EcoICRI	GAGCTC	2 cut(s)	406, 483
EcoNI	CCTNNNNNAGG	1 cut(s)	2696
EcoO109I	RGGNCCY	1 cut(s)	1669
EcoRI	GAATTC	3 cut(s)	562, 1964, 2343
EcoRII	CCWGG	4 cut(s)	1114, 2337, 2385, 2726
EcoT14I	CCWWGG	4 cut(s)	1461, 2036, 2151, 2738
EcoT38I	GRGCYC	2 cut(s)	408, 485
EgeI	GGCGCC	1 cut(s)	1486
EheI	GGCGCC	1 cut(s)	1486
ErhI	CCWWGG	4 cut(s)	1461, 2036, 2151, 2738
FaqI	GGGAC	4 cut(s)	383, 976, 2179, 2810
FauI	CCCGC	1 cut(s)	592
FauNDI	CATATG	1 cut(s)	1200
FbaI	TGATCA	2 cut(s)	795, 1981
FblI	GTMKAC	1 cut(s)	2400
FokI	GGATG	4 cut(s)	90, 664, 1531, 1695
FriOI	GRGCYC	2 cut(s)	408, 485
FspBI	CTAG	3 cut(s)	1110, 1629, 2025
GlaI	GCGC	5 cut(s)	63, 321, 1486, 1643, 2957
GsaI	CCCAGC	1 cut(s)	2166
GsuI	CTGGAG	2 cut(s)	110, 344
HaeII	RGCGCY	3 cut(s)	65, 323, 1488
HaeIII	GGCC	8 cut(s)	329, 841, 905, 1114, 1186, 2013, 2186, 2484
HapII	CCGG	9 cut(s)	65, 216, 413, 452, 516, 1056, 1190, 1423, 1488
HhaI	GCGC	5 cut(s)	64, 322, 1487, 1644, 2958
Hin1I	GRCGYC	1 cut(s)	1485
Hin6I	GCGC	5 cut(s)	62, 320, 1485, 1642, 2956
HinP1I	GCGC	5 cut(s)	62, 320, 1485, 1642, 2956
HincII	GTYRAC	3 cut(s)	513, 1561, 2383
HindII	GTYRAC	3 cut(s)	513, 1561, 2383
HindIII	AAGCTT	2 cut(s)	1091, 2271
HpaII	CCGG	9 cut(s)	65, 216, 413, 452, 516, 1056, 1190, 1423, 1488
Hpy99I	CGWCG	6 cut(s)	47, 290, 490, 610, 847, 2408
HpyCH4III	ACNGT	6 cut(s)	490, 610, 1036, 1448, 2419, 2705
HpyCH4IV	ACGT	2 cut(s)	2005, 2403
HpyF10VI	GCNNNNNNNGC	4 cut(s)	317, 326, 911, 2183
HpySE526I	ACGT	2 cut(s)	2005, 2403
Hsp92I	GRCGYC	1 cut(s)	1485
HspAI	GCGC	5 cut(s)	62, 320, 1485, 1642, 2956
KasI	GGCGCC	1 cut(s)	1484
KroI	GCCGGC	1 cut(s)	1189
KroNI	GCCGGC	1 cut(s)	1191
Ksp22I	TGATCA	2 cut(s)	795, 1981
LmnI	GCTCC	9 cut(s)	126, 244, 349, 403, 427, 1272, 1534, 1571, 2748
Lsp1109I	GCAGC	5 cut(s)	990, 1319, 1623, 2049, 2320
LweI	GCATC	4 cut(s)	1240, 2104, 2561, 2709
MabI	ACCWGGT	1 cut(s)	2385
MaeI	CTAG	3 cut(s)	1110, 1629, 2025
MaeII	ACGT	2 cut(s)	2005, 2403
MaeIII	GTNAC	3 cut(s)	637, 1448, 2494
MfeI	CAATTG	2 cut(s)	1752, 1824
MflI	RGATCY	5 cut(s)	1230, 1597, 1795, 2249, 2596
MhlI	GDGCHC	3 cut(s)	408, 485, 2531
MlsI	TGGCCA	1 cut(s)	2484
MluNI	TGGCCA	1 cut(s)	2484
Mly113I	GGCGCC	1 cut(s)	1485
MlyI	GAGTC	5 cut(s)	24, 444, 634, 1012, 2406
MmeI	TCCRAC	5 cut(s)	25, 268, 327, 1764, 2218
Mox20I	TGGCCA	1 cut(s)	2484
MroNI	GCCGGC	1 cut(s)	1189
MroXI	GAANNNNTTC	1 cut(s)	1964
MscI	TGGCCA	1 cut(s)	2484
MseI	TTAA	6 cut(s)	1592, 1731, 1952, 2628, 2733, 2882
MslI	CAYNNNNRTG	2 cut(s)	1977, 2669
Msp20I	TGGCCA	1 cut(s)	2484
MspA1I	CMGCKG	5 cut(s)	136, 1889, 2333, 2567, 2939
MspI	CCGG	9 cut(s)	65, 216, 413, 452, 516, 1056, 1190, 1423, 1488
MspR9I	CCNGG	6 cut(s)	66, 414, 1116, 2339, 2387, 2728
MunI	CAATTG	2 cut(s)	1752, 1824
Mva1269I	GAATGC	3 cut(s)	283, 676, 991
MvaI	CCWGG	4 cut(s)	1116, 2339, 2387, 2728
MvnI	CGCG	4 cut(s)	28, 170, 599, 1905
MwoI	GCNNNNNNNGC	4 cut(s)	317, 326, 911, 2183
NaeI	GCCGGC	1 cut(s)	1191
NarI	GGCGCC	1 cut(s)	1485
NciI	CCSGG	2 cut(s)	66, 414
NcoI	CCATGG	3 cut(s)	1461, 2151, 2738
NdeI	CATATG	1 cut(s)	1200
NgoMIV	GCCGGC	1 cut(s)	1189
NlaIV	GGNNCC	9 cut(s)	246, 384, 450, 1147, 1274, 1486, 1567, 1797, 2744
NmeAIII	GCCGAG	2 cut(s)	337, 1032
NmuCI	GTSAC	3 cut(s)	637, 1448, 2494
NspI	RCATGY	1 cut(s)	631
NspV	TTCGAA	2 cut(s)	852, 1376
PagI	TCATGA	1 cut(s)	1618
PaqCI	CACCTGC	3 cut(s)	661, 956, 2128
PasI	CCCWGGG	2 cut(s)	2338, 2727
PceI	AGGCCT	4 cut(s)	329, 1114, 2013, 2186
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 81, 198
PctI	GAATGC	3 cut(s)	283, 676, 991
PdiI	GCCGGC	1 cut(s)	1191
PdmI	GAANNNNTTC	1 cut(s)	1964
PfoI	TCCNGGA	1 cut(s)	412
PinAI	ACCGGT	1 cut(s)	1055
Ple19I	CGATCG	1 cut(s)	285
PleI	GAGTC	5 cut(s)	24, 443, 634, 1012, 2405
PluTI	GGCGCC	1 cut(s)	1488
PpsI	GAGTC	5 cut(s)	24, 443, 634, 1012, 2405
PpuMI	RGGWCCY	1 cut(s)	1669
Psp124BI	GAGCTC	2 cut(s)	408, 485
Psp5II	RGGWCCY	1 cut(s)	1669
Psp6I	CCWGG	4 cut(s)	1114, 2337, 2385, 2726
PspFI	CCCAGC	1 cut(s)	2162
PspGI	CCWGG	4 cut(s)	1114, 2337, 2385, 2726
PspN4I	GGNNCC	9 cut(s)	246, 384, 450, 1147, 1274, 1486, 1567, 1797, 2744
PspPI	GGNCC	5 cut(s)	103, 1582, 1669, 1813, 1922
PspPPI	RGGWCCY	1 cut(s)	1669
PstI	CTGCAG	1 cut(s)	937
PstNI	CAGNNNCTG	1 cut(s)	2374
PsuI	RGATCY	5 cut(s)	1230, 1597, 1795, 2249, 2596
PvuI	CGATCG	1 cut(s)	285
PvuII	CAGCTG	4 cut(s)	136, 1889, 2333, 2567
RseI	CAYNNNNRTG	2 cut(s)	1977, 2669
SacI	GAGCTC	2 cut(s)	408, 485
SaqAI	TTAA	6 cut(s)	1592, 1731, 1952, 2628, 2733, 2882
Sau96I	GGNCC	5 cut(s)	103, 1582, 1669, 1813, 1922
ScaI	AGTACT	1 cut(s)	809
SchI	GAGTC	5 cut(s)	24, 444, 634, 1012, 2406
ScrFI	CCNGG	6 cut(s)	66, 414, 1116, 2339, 2387, 2728
SduI	GDGCHC	3 cut(s)	408, 485, 2531
SexAI	ACCWGGT	1 cut(s)	2385
SfaNI	GCATC	4 cut(s)	1240, 2104, 2561, 2709
SfcI	CTRYAG	2 cut(s)	933, 2940
SfoI	GGCGCC	1 cut(s)	1486
SfuI	TTCGAA	2 cut(s)	852, 1376
SinI	GGWCC	5 cut(s)	103, 1582, 1669, 1813, 1922
SmiMI	CAYNNNNRTG	2 cut(s)	1977, 2669
SmlI	CTYRAG	3 cut(s)	803, 1436, 2808
SmoI	CTYRAG	3 cut(s)	803, 1436, 2808
SseBI	AGGCCT	4 cut(s)	329, 1114, 2013, 2186
SspDI	GGCGCC	1 cut(s)	1484
SspMI	CTAG	3 cut(s)	1110, 1629, 2025
SstI	GAGCTC	2 cut(s)	408, 485
StuI	AGGCCT	4 cut(s)	329, 1114, 2013, 2186
StyD4I	CCNGG	6 cut(s)	64, 412, 1114, 2337, 2385, 2726
StyI	CCWWGG	4 cut(s)	1461, 2036, 2151, 2738
TaaI	ACNGT	6 cut(s)	490, 610, 1036, 1448, 2419, 2705
TaiI	ACGT	2 cut(s)	2008, 2406
TatI	WGTACW	4 cut(s)	807, 872, 1028, 2915
TauI	GCSGC	8 cut(s)	28, 173, 359, 398, 914, 1189, 1905, 2725
Tru1I	TTAA	6 cut(s)	1592, 1731, 1952, 2628, 2733, 2882
Tru9I	TTAA	6 cut(s)	1592, 1731, 1952, 2628, 2733, 2882
TscAI	CASTG	2 cut(s)	942, 1294
TseFI	GTSAC	3 cut(s)	637, 1448, 2494
TseI	GCWGC	5 cut(s)	1003, 1307, 1611, 2062, 2333
Tsp45I	GTSAC	3 cut(s)	637, 1448, 2494
TspDTI	ATGAA	9 cut(s)	668, 1607, 1635, 1716, 1957, 2282, 2283, 2419, 2856
TspGWI	ACGGA	5 cut(s)	90, 674, 708, 1805, 1841
TspRI	CASTG	2 cut(s)	942, 1294
VneI	GTGCAC	1 cut(s)	2527
VpaK11BI	GGWCC	5 cut(s)	103, 1582, 1669, 1813, 1922
XagI	CCTNNNNNAGG	1 cut(s)	2696
XapI	RAATTY	7 cut(s)	388, 562, 847, 854, 1588, 1964, 2343
XbaI	TCTAGA	1 cut(s)	2024
XceI	RCATGY	1 cut(s)	631
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1576
XmiI	GTMKAC	1 cut(s)	2400
XmnI	GAANNNNTTC	1 cut(s)	1964
XspI	CTAG	3 cut(s)	1110, 1629, 2025
ZrmI	AGTACT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.