Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

36855878 .. 36861339

Gene Structure 5462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g44221.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4176 bp

ATGACGGGGGATTTATGGACCGGGTTTTGTGGGGGATCTGGAGGTTCAGAGAGTTTTAACTTTCAGTTTCTGGTTCATCCTTCGTCATGCGTTAATCACGCGTTGATAATTTTCCTAAACATTGTACTTCTTGTGGTGCTCTTGTTCACTGTGTTTCTCAAGTCATCAAAAATAGTTCATGTTCCAGCCCGATTTCTAGGCTTTTCGAGTTGGCAAATAGTCTCGGCCATTTTCAATGGCGGTCTTGGATTTGTGCACTTGTGCTTGGGAGTCTGGATTTTAGAAGAGAAGCTGAGGAATTCACACACTGCTTTGCCTTTGAATTGGTGGTTACTTGGTATTTTTCAAGGCTTCACATGGTTGTTTTTGAGTTTAACTCTAAGCATCAGGGTGAAGAAACTTCCAAGACAGCCTTCAAGACTGCTGTCCATCCTTGCATTTTTGTTCTCCGGAGTTGTCTTTGCTCTATCGCTCTTCGCTGTCATTTTCAGAAATGAAATATCAGTTATGATAGTACTAGATATCCTGACTTTCCCAGGAGCAGCATTGTTGCTGTTATGTGTTTTCAAGGGGTATAAGTATGAAGACGGTGATGAGATCATCAGTGACAATGGCCTTTATACCCCTTTAAATGGTGAATCCAATGGCAATAGTGAAGGTAATGATCATACAACCCCATTCAGCAAAGCTGGTTTATTCAGTAGAATGTCATTCTGGTGGTTAAATTCATTGATGAAAAGAGGTAGGGAGAAAACTCTGGAGGATGAAGATATACCGGAGTTGCGCAAGGAAGATCGAGCAGAAAGTTGTTATGGGATGTTTCTGGAGCAACTGAGCAAGCAGAAAAAAATTGAACCAAATTCCCAGCCATCAGTGTTAAGGATTATAATCCTATGCCACTGGAAGGAGATTTTACTATCTGGTTTCTTTGCTTTGCTGAAGATACTCACTATCTGTGCTGGTCCTCTGCTTCTCAATGCCTTCATTTTGGTTGCAGAGGGAAAGGAAAGTTTCGAGCATGAAGGTTATCTGTTAGCCGGAGCACTTTTTGTTTTGAAAACCATTGAATCCTTGTCACAAAGGCAGTGGTACTTCAGATGCAGGCTTATTGGTTTGAAAGTTAGGTCTTTGCTGTCAGCAGCCATTTACAAAAAGCAATTGAGATTATCTAATTCTGCTAAGTTGACACACTCAGGTGGTGAGATTATGAATTATGTTACTGTTGATGCTTATAGGATTGGAGAATTCCCATTTTGGTTCCATCAGACTTGGACTACTAGCATCCAGCTCTGTTTTTCTTTGGTAATTCTTTTCCGTGCGGTCGGCCTAGCTACATTTGCAGCCTTGGTGATGATACTTTTTAGTGTTATTTTGAATGCTCCACTTGCTAAGCTACAACATAAGTTTCAGAGTAAGCTTATGAAGGCACAAGATGAAAGACTCAAGGCTAGTTCAGAGGCTCTAGTGAACATGAAGGTCTTAAAGTTATATGCATGGGAAACACATTTCAGGAAGGCAATAGAGAAGTTAAGGAAAGAGGAGCACAAATGGTTATCTGCAATGCTGTTCAGAATAGCATATAGTACATTCCTCTTTTGGACAACTCCTGTTTTAGTCTCTGCTGCAACATTTGGGGCATGCTATTTGCTCAATATTCCGTTACATGCGAATAATATTTTCACTTTCATCTCCACTCTGAGACTTGTTCAGGACCCCATTCGAACAATACCTGATGTTTTTGCGGTTGTCATTCAAGCCAAGGTTGGATTTGCTCGTATTGTGAAATTCCTCGAGGCACCTGAGCTGCAACCTTCAAATGTCCGGAAGTACAACATGAAGAATGTAGATAAGTCCATTGAAATTAAGTCAGCTAATTTTTCATGGGAAGAGAATTCATCGAAGTCCATACTGAGAAATATAAATTTAGAGGTTAGACCAGGCGAAAAGGTGGCTATATGTGGAGAAGTTGGCTCAGGAAAATCAAGCCTTTTGGCTACAATTCTTGGAGAAATTCCGACTGTGCAAGGAAATATTCAAGTTTATGGCAAGATTGCCTATGTTTCTCAAACAGCATGGATTCAGTCAGGAACTATACAAGAAAATATTCTCTTTGGCTCTTGTATGGATAGTAAGAGATACCGGGAAACACTTGAGAGATGCTCACTAGTAAAGGACCTTGAGCTGCTTCCCTATGGTGACCTTACTGAAATAGGGGAGAGAGGGGTGAATCTTAGTGGAGGTCAGAAGCAGCGGATCCAACTTGCACGCGCTCTCTATCAGGATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAGCTTATTTAATGAATATGTAATGGAAGCACTTTCAGGCAAGACAGTACTACTTGTGACCCATCAAGTTGATTTCTTGCCTGCATTTGATTTCGTTTTGTTGATGATGGATGGGGAGATCCTACAAGCAGCTCCGTATCAGCATCTATTGGATATAAGCCGAGAATTCCAGGATCTTGTCAATGCACACAAAGAAACTGCTGGTTCCCAAAGGCTTTCAGATGTCACTTCTGCTCAAAATTCTGGAATATCATCTACAGAGATTAAGAAGAGTTATGTGGAAAAGCCATTGAAAGAAAATAAAGTAGTTATTGGGGGTCTTGAAACGTCAAAGTCTATATTCTCACAACTACTAAACTCACTTTTTCGTGCACCCATGTCATTCTATGATTCAACACCCTTGGGAAGGGTACTTAGTCGGGTTTCGTCTGATCTGAGTATCACAGATATTGATATTCCATTCGCTTTAGTATTTGCTTGCACATCTACCATCAATGCCTATAGCAATCTTGGAGTATTGACTGTTGTTACCTGGCAAGTCCTGTTTGTCTCCATACCAATGATCTATGTCGCAATTCAGCTACAGAAATATTACTATTCCACTGCAAAAGAGTTGATGAGGATCAACGGAACAACCAAGTCCTTTGTAGCGAACCATCTCACGGAGTCTGTCTCAGGTGCCATTACCATAAGAGCTTTCAATGAAGAAGATCGCTTCTCGGCAAAGAACTTTGACCTCATTGACACAAATGCTAGTCCTTATTTCCACAGTTTTTCGGCAAATGAGTGGTTAATTCAACGGTTAGAGATGATCAGCGCAGCGGTTCTTGCCTCTGCAGCACTTTGCATGGTTTTGCTTCCAACTGGAACTTTTAGCTCTGGATTTGTTGGGATGGCACTTTCTTATGGTCTATCATTAAACGTGACCTTGATCAAATCAATTCAGAACCAGTGCACTATAGCAAATTACATCATTTCTGTAGAAAGACTAGATCAATACATGCACATTCCGAGTGAATCCCCAGAAGTAGTTGAGGGAAATCGTCCACCGGCCAACTGGCCTGTAGTAGGAAAAGTGGAGATACAAAATTTGCAGATAAGATATAGGGAAGACACACCACTTGTTCTCCGAGGGATCAGTTGTATTTTTGAAGGAGGGCATAAAATTGGTATTGTTGGTAGGACAGGCAGTGGGAAGTCTACTCTAATCGGTGCTCTATTTCGGCTGGTTGAGCCAGCCGGAGGGAAGATCATAGTCGATGGCATTGACATCTGCACTATAGGCCTTCATGATCTGAGGTCAAGAATTGGAATAATACCTCAAGACCCTACTCTCTTTAGTGGGACTGTTAGATACAATTTGGACCCTTTATCTGAACATTCAGACCAGGAAATATGGGAGGTCCTTGGGAAGTGTCAGCTTCGAGAGCCTGTCGAGGAGAGAGAAGGCGGCTTGGACTCGTTAGCTTCTCTTTCAGTTGTGGATGATGGATCAAACTGGAGCATGGGGCAAAGGCAACTTTTCTGCCTCGGGCGCGCGCTTCTAAGGAGAAGTCGGGTATTGGTGCTTGATGAAGCAACTGCATCTATTGACAATGCAACTGATACGATCCTGCAGAAGACTATAAGGACTGAGTTTGAAGCTTGTACAGTAATTACGGTAGCTCACAGGATACCAACTGTGATGGATTGCACAATGGTGCTTTCGATTAGTGACGGAAAAATAGTGGAGTATGATGAGCCAATGCGGTTGATGAAGAAAGAAGGGTCGCTATTTGGGAAGCTTGTCAAGGAGTACTGGTCTCATCTCCAGTCTGCAGAATCTCATATTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1392

Amino Acids

155.45

Weight (kDa)

6.98

Isoelectric Point (pI)

37.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABCC10_N	PF24358	4 - 194	5.8e-74	ABCC10 N-terminal domain
ABC_membrane	PF00664	305 - 572	8.7e-24	ABC transporter transmembrane region
ABC_tran	PF00005	637 - 771	1.4e-22	ABC transporter
ABC_membrane	PF00664	887 - 1082	2.5e-22	ABC transporter transmembrane region
ABC_tran	PF00005	1156 - 1308	3.9e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
AbsI	CCTCGAGG	1 cut(s)	1790
Acc16I	TGCGCA	1 cut(s)	785
AccB1I	GGYRCC	2 cut(s)	1795, 3017
AccI	GTMKAC	1 cut(s)	3539
AccII	CGCG	4 cut(s)	101, 2268, 3876, 3878
AccIII	TCCGGA	2 cut(s)	449, 1821
AciI	CCGC	7 cut(s)	240, 1319, 1742, 2251, 3161, 3789, 4087
AcoI	YGGCCR	2 cut(s)	225, 3390
AcuI	CTGAAG	2 cut(s)	959, 1078
AfaI	GTAC	9 cut(s)	126, 516, 1091, 1585, 1829, 2388, 2751, 3988, 4136
AfiI	CCNNNNNNNGG	6 cut(s)	632, 904, 2745, 3001, 3407, 3581
AflIII	ACRYGT	1 cut(s)	99
AhlI	ACTAGT	1 cut(s)	2164
AjnI	CCWGG	5 cut(s)	535, 1936, 2508, 2870, 3726
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AleI	CACNNNNGTG	2 cut(s)	1194, 4037
Alw21I	GWGCWC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
Alw26I	GTCTC	6 cut(s)	226, 1621, 1693, 2893, 3016, 4146
Alw44I	GTGCAC	3 cut(s)	254, 2709, 3292
AlwNI	CAGNNNCTG	1 cut(s)	70
Ama87I	CYCGRG	2 cut(s)	1790, 3869
Aor13HI	TCCGGA	2 cut(s)	449, 1821
AoxI	GGCC	6 cut(s)	225, 613, 1324, 3390, 3398, 3622
ApaLI	GTGCAC	3 cut(s)	254, 2709, 3292
Asp700I	GAANNNNTTC	1 cut(s)	2103
AspLEI	GCGC	6 cut(s)	786, 2270, 3158, 3876, 3878, 3880
AspS9I	GGNCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
AsuC2I	CCSGG	2 cut(s)	22, 2141
AsuHPI	GGTGA	7 cut(s)	403, 602, 647, 1211, 1360, 2207, 2236
AsuII	TTCGAA	1 cut(s)	1720
AvaI	CYCGRG	2 cut(s)	1790, 3869
AvaII	GGWCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
BaeGI	GKGCMC	3 cut(s)	258, 2713, 3296
BamHI	GGATCC	1 cut(s)	2253
BanI	GGYRCC	2 cut(s)	1795, 3017
BbsI	GAAGAC	3 cut(s)	591, 3456, 3965
Bbv12I	GWGCWC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
BbvCI	CCTCAGC	1 cut(s)	293
BciT130I	CCWGG	5 cut(s)	537, 1938, 2510, 2872, 3728
BciVI	GTATCC	1 cut(s)	4005
BclI	TGATCA	3 cut(s)	664, 3150, 3270
BcnI	CCSGG	2 cut(s)	22, 2141
BcoDI	GTCTC	6 cut(s)	226, 1621, 1693, 2893, 3016, 4146
BcuI	ACTAGT	1 cut(s)	2164
BfaI	CTAG	9 cut(s)	197, 518, 1278, 1328, 1449, 1463, 2165, 3093, 3329
BfuI	GTATCC	1 cut(s)	4005
BlpI	GCTNAGC	1 cut(s)	1389
BmcAI	AGTACT	3 cut(s)	516, 2388, 4136
Bme1390I	CCNGG	7 cut(s)	22, 537, 1938, 2141, 2510, 2872, 3728
Bme18I	GGWCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
BmeT110I	CYCGRG	2 cut(s)	1790, 3869
BmgT120I	GGNCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
BmiI	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3019, 3705
BmrFI	CCNGG	7 cut(s)	22, 537, 1938, 2141, 2510, 2872, 3728
BmsI	GCATC	9 cut(s)	393, 1088, 1216, 1290, 2147, 2272, 2314, 2491, 3932
BoxI	GACNNNNGTC	1 cut(s)	424
BpiI	GAAGAC	3 cut(s)	591, 3456, 3965
BplI	GAGNNNNNCTC	6 cut(s)	361, 393, 2144, 2176, 2996, 3028
BpmI	CTGGAG	5 cut(s)	60, 779, 845, 3859, 4133
Bpu10I	CCTNAGC	3 cut(s)	293, 1800, 1972
Bpu1102I	GCTNAGC	1 cut(s)	1389
Bpu14I	TTCGAA	1 cut(s)	1720
BpuEI	CTTGAG	5 cut(s)	143, 1427, 2171, 2198, 3645
BpuMI	CCSGG	2 cut(s)	22, 2141
BsaBI	GATNNNNATC	3 cut(s)	887, 2292, 2960
BsaI	GGTCTC	1 cut(s)	4146
BsaJI	CCNNGG	7 cut(s)	535, 1344, 1758, 2739, 3469, 3745, 3868
BsaWI	WCCGGW	3 cut(s)	449, 775, 1821
BsaXI	ACNNNNNCTCC	4 cut(s)	3450, 3480, 4124, 4154
Bsc4I	CCNNNNNNNGG	6 cut(s)	632, 904, 2745, 3001, 3407, 3581
Bse118I	RCCGGY	1 cut(s)	3388
Bse1I	ACTGG	7 cut(s)	905, 3208, 3289, 3401, 3842, 4142, 4150
Bse3DI	GCAATG	1 cut(s)	1566
Bse8I	GATNNNNATC	3 cut(s)	887, 2292, 2960
BseAI	TCCGGA	2 cut(s)	449, 1821
BseBI	CCWGG	5 cut(s)	537, 1938, 2510, 2872, 3728
BseDI	CCNNGG	7 cut(s)	535, 1344, 1758, 2739, 3469, 3745, 3868
BseJI	GATNNNNATC	3 cut(s)	887, 2292, 2960
BseLI	CCNNNNNNNGG	6 cut(s)	632, 904, 2745, 3001, 3407, 3581
BseMI	GCAATG	1 cut(s)	1566
BseNI	ACTGG	7 cut(s)	905, 3208, 3289, 3401, 3842, 4142, 4150
BsePI	GCGCGC	2 cut(s)	3874, 3876
BseRI	GAGGAG	2 cut(s)	1553, 3791
BseSI	GKGCMC	3 cut(s)	258, 2713, 3296
BseYI	CCCAGC	1 cut(s)	864
BsgI	GTGCAG	1 cut(s)	3598
Bsh1236I	CGCG	4 cut(s)	101, 2268, 3876, 3878
Bsh1285I	CGRYCG	1 cut(s)	1323
BshFI	GGCC	6 cut(s)	227, 615, 1326, 3392, 3400, 3624
BshNI	GGYRCC	2 cut(s)	1795, 3017
BsiEI	CGRYCG	1 cut(s)	1323
BsiHKAI	GWGCWC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
BsiHKCI	CYCGRG	2 cut(s)	1790, 3869
BsiSI	CCGG	8 cut(s)	21, 450, 776, 1038, 1822, 2140, 3389, 3579
BslFI	GGGAC	1 cut(s)	3697
BslI	CCNNNNNNNGG	6 cut(s)	632, 904, 2745, 3001, 3407, 3581
BsmAI	GTCTC	6 cut(s)	226, 1621, 1693, 2893, 3016, 4146
BsmFI	GGGAC	1 cut(s)	3697
BsmI	GAATGC	1 cut(s)	1381
BsnI	GGCC	6 cut(s)	227, 615, 1326, 3392, 3400, 3624
Bso31I	GGTCTC	1 cut(s)	4146
BsoBI	CYCGRG	2 cut(s)	1790, 3869
Bsp119I	TTCGAA	1 cut(s)	1720
Bsp1286I	GDGCHC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
Bsp13I	TCCGGA	2 cut(s)	449, 1821
Bsp1407I	TGTACA	1 cut(s)	3986
Bsp1720I	GCTNAGC	1 cut(s)	1389
BspACI	CCGC	7 cut(s)	240, 1319, 1742, 2251, 3161, 3789, 4087
BspANI	GGCC	6 cut(s)	227, 615, 1326, 3392, 3400, 3624
BspEI	TCCGGA	2 cut(s)	449, 1821
BspFNI	CGCG	4 cut(s)	101, 2268, 3876, 3878
BspHI	TCATGA	1 cut(s)	3628
BspLI	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3019, 3705
BspMAI	CTGCAG	3 cut(s)	3178, 3957, 4159
BspQI	GCTCTTC	1 cut(s)	479
BspT104I	TTCGAA	1 cut(s)	1720
BspT107I	GGYRCC	2 cut(s)	1795, 3017
BspTNI	GGTCTC	1 cut(s)	4146
BsrDI	GCAATG	1 cut(s)	1566
BsrFI	RCCGGY	1 cut(s)	3388
BsrGI	TGTACA	1 cut(s)	3986
BsrI	ACTGG	7 cut(s)	905, 3208, 3289, 3401, 3842, 4142, 4150
BssAI	RCCGGY	1 cut(s)	3388
BssECI	CCNNGG	7 cut(s)	535, 1344, 1758, 2739, 3469, 3745, 3868
BssHII	GCGCGC	2 cut(s)	3874, 3876
BssT1I	CCWWGG	4 cut(s)	1344, 1758, 2739, 3745
Bst2UI	CCWGG	5 cut(s)	537, 1938, 2510, 2872, 3728
Bst6I	CTCTTC	4 cut(s)	279, 479, 1881, 2603
BstAPI	GCANNNNNTGC	1 cut(s)	2333
BstAUI	TGTACA	1 cut(s)	3986
BstBI	TTCGAA	1 cut(s)	1720
BstC8I	GCNNGC	9 cut(s)	839, 1103, 1639, 2266, 2421, 2818, 3576, 3876, 3878
BstEII	GGTNACC	1 cut(s)	2195
BstENI	CCTNNNNNAGG	2 cut(s)	2743, 3405
BstFNI	CGCG	4 cut(s)	101, 2268, 3876, 3878
BstHHI	GCGC	6 cut(s)	786, 2270, 3158, 3876, 3878, 3880
BstMAI	GTCTC	6 cut(s)	226, 1621, 1693, 2893, 3016, 4146
BstMCI	CGRYCG	1 cut(s)	1323
BstNI	CCWGG	5 cut(s)	537, 1938, 2510, 2872, 3728
BstNSI	RCATGY	3 cut(s)	1641, 1667, 3343
BstPAI	GACNNNNGTC	1 cut(s)	424
BstPI	GGTNACC	1 cut(s)	2195
BstSCI	CCNGG	7 cut(s)	20, 535, 1936, 2139, 2508, 2870, 3726
BstSLI	GKGCMC	3 cut(s)	258, 2713, 3296
BstUI	CGCG	4 cut(s)	101, 2268, 3876, 3878
BstV2I	GAAGAC	3 cut(s)	591, 3456, 3965
BstX2I	RGATCY	4 cut(s)	35, 2253, 2457, 2512
BstYI	RGATCY	4 cut(s)	35, 2253, 2457, 2512
BsuI	GTATCC	1 cut(s)	4005
BsuRI	GGCC	6 cut(s)	227, 615, 1326, 3392, 3400, 3624
BtsI	GCAGTG	4 cut(s)	306, 1091, 2940, 3535
Cac8I	GCNNGC	9 cut(s)	839, 1103, 1639, 2266, 2421, 2818, 3576, 3876, 3878
CaiI	CAGNNNCTG	1 cut(s)	70
CciI	TCATGA	1 cut(s)	3628
CfoI	GCGC	6 cut(s)	786, 2270, 3158, 3876, 3878, 3880
Cfr10I	RCCGGY	1 cut(s)	3388
Cfr13I	GGNCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
Csp6I	GTAC	9 cut(s)	125, 515, 1090, 1584, 1828, 2387, 2750, 3987, 4135
CspCI	CAANNNNNGTGG	2 cut(s)	1067, 1102
CviQI	GTAC	9 cut(s)	125, 515, 1090, 1584, 1828, 2387, 2750, 3987, 4135
DraI	TTTAAA	1 cut(s)	630
EaeI	YGGCCR	2 cut(s)	225, 3390
Eam1104I	CTCTTC	4 cut(s)	279, 479, 1881, 2603
EarI	CTCTTC	4 cut(s)	279, 479, 1881, 2603
Eco130I	CCWWGG	4 cut(s)	1344, 1758, 2739, 3745
Eco147I	AGGCCT	1 cut(s)	3624
Eco31I	GGTCTC	1 cut(s)	4146
Eco32I	GATATC	1 cut(s)	523
Eco47I	GGWCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
Eco57I	CTGAAG	2 cut(s)	959, 1078
Eco88I	CYCGRG	2 cut(s)	1790, 3869
Eco91I	GGTNACC	1 cut(s)	2195
EcoNI	CCTNNNNNAGG	2 cut(s)	2743, 3405
EcoO109I	RGGNCCY	3 cut(s)	1711, 2173, 3742
EcoO65I	GGTNACC	1 cut(s)	2195
EcoRI	GAATTC	4 cut(s)	298, 1244, 1891, 2504
EcoRII	CCWGG	5 cut(s)	535, 1936, 2508, 2870, 3726
EcoRV	GATATC	1 cut(s)	523
EcoT14I	CCWWGG	4 cut(s)	1344, 1758, 2739, 3745
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	4 cut(s)	1344, 1758, 2739, 3745
FalI	AAGNNNNNCTT	2 cut(s)	397, 429
FaqI	GGGAC	1 cut(s)	3697
FbaI	TGATCA	3 cut(s)	664, 3150, 3270
FblI	GTMKAC	1 cut(s)	3539
FspBI	CTAG	9 cut(s)	197, 518, 1278, 1328, 1449, 1463, 2165, 3093, 3329
FspI	TGCGCA	1 cut(s)	785
GlaI	GCGC	6 cut(s)	785, 2269, 3157, 3875, 3877, 3879
GsaI	CCCAGC	1 cut(s)	868
GsuI	CTGGAG	5 cut(s)	60, 779, 845, 3859, 4133
HaeIII	GGCC	6 cut(s)	227, 615, 1326, 3392, 3400, 3624
HapII	CCGG	8 cut(s)	21, 450, 776, 1038, 1822, 2140, 3389, 3579
HhaI	GCGC	6 cut(s)	786, 2270, 3158, 3876, 3878, 3880
Hin6I	GCGC	6 cut(s)	784, 2268, 3156, 3874, 3876, 3878
HinP1I	GCGC	6 cut(s)	784, 2268, 3156, 3874, 3876, 3878
HincII	GTYRAC	1 cut(s)	1185
HindII	GTYRAC	1 cut(s)	1185
HindIII	AAGCTT	4 cut(s)	1415, 2341, 3981, 4121
HpaII	CCGG	8 cut(s)	21, 450, 776, 1038, 1822, 2140, 3389, 3579
HphI	GGTGA	7 cut(s)	403, 602, 647, 1211, 1360, 2207, 2236
Hpy166II	GTNNAC	8 cut(s)	147, 256, 1185, 1468, 2711, 3294, 3386, 3540
Hpy8I	GTNNAC	8 cut(s)	147, 256, 1185, 1468, 2711, 3294, 3386, 3540
HpyCH4IV	ACGT	2 cut(s)	2666, 3261
HpySE526I	ACGT	2 cut(s)	2666, 3261
HspAI	GCGC	6 cut(s)	784, 2268, 3156, 3874, 3876, 3878
Kpn2I	TCCGGA	2 cut(s)	449, 1821
Ksp22I	TGATCA	3 cut(s)	664, 3150, 3270
LguI	GCTCTTC	1 cut(s)	479
LmnI	GCTCC	7 cut(s)	539, 826, 1040, 1384, 1540, 2476, 3840
LweI	GCATC	9 cut(s)	393, 1088, 1216, 1290, 2147, 2272, 2314, 2491, 3932
MaeI	CTAG	9 cut(s)	197, 518, 1278, 1328, 1449, 1463, 2165, 3093, 3329
MaeII	ACGT	2 cut(s)	2666, 3261
MfeI	CAATTG	1 cut(s)	1157
MflI	RGATCY	4 cut(s)	35, 2253, 2457, 2512
MhlI	GDGCHC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
MluI	ACGCGT	1 cut(s)	99
MlyI	GAGTC	4 cut(s)	279, 1434, 3014, 3791
MmeI	TCCRAC	4 cut(s)	1744, 2039, 2281, 3224
Mph1103I	ATGCAT	1 cut(s)	1495
MroI	TCCGGA	2 cut(s)	449, 1821
MroXI	GAANNNNTTC	1 cut(s)	2103
MslI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 2897, 4037
MspA1I	CMGCKG	2 cut(s)	2251, 3161
MspI	CCGG	8 cut(s)	21, 450, 776, 1038, 1822, 2140, 3389, 3579
MspR9I	CCNGG	7 cut(s)	22, 537, 1938, 2141, 2510, 2872, 3728
MunI	CAATTG	1 cut(s)	1157
Mva1269I	GAATGC	1 cut(s)	1381
MvaI	CCWGG	5 cut(s)	537, 1938, 2510, 2872, 3728
MvnI	CGCG	4 cut(s)	101, 2268, 3876, 3878
NciI	CCSGG	2 cut(s)	22, 2141
NlaIV	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3019, 3705
NmeAIII	GCCGAG	3 cut(s)	203, 2525, 3038
NmuCI	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 3262, 4052
NsbI	TGCGCA	1 cut(s)	785
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	3 cut(s)	1641, 1667, 3343
NspV	TTCGAA	1 cut(s)	1720
OliI	CACNNNNGTG	2 cut(s)	1194, 4037
PaeI	GCATGC	1 cut(s)	1641
PaeR7I	CTCGAG	1 cut(s)	1790
PagI	TCATGA	1 cut(s)	3628
PauI	GCGCGC	2 cut(s)	3874, 3876
PceI	AGGCCT	1 cut(s)	3624
PciSI	GCTCTTC	1 cut(s)	479
PctI	GAATGC	1 cut(s)	1381
PdmI	GAANNNNTTC	1 cut(s)	2103
PfeI	GAWTC	7 cut(s)	638, 1067, 2077, 2227, 2729, 3356, 4160
PfoI	TCCNGGA	1 cut(s)	2508
PleI	GAGTC	4 cut(s)	278, 1434, 3013, 3791
PpsI	GAGTC	4 cut(s)	278, 1434, 3013, 3791
PpuMI	RGGWCCY	3 cut(s)	1711, 2173, 3742
PshAI	GACNNNNGTC	1 cut(s)	424
PsiI	TTATAA	1 cut(s)	887
Psp5II	RGGWCCY	3 cut(s)	1711, 2173, 3742
Psp6I	CCWGG	5 cut(s)	535, 1936, 2508, 2870, 3726
PspEI	GGTNACC	1 cut(s)	2195
PspFI	CCCAGC	1 cut(s)	864
PspGI	CCWGG	5 cut(s)	535, 1936, 2508, 2870, 3726
PspN4I	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3019, 3705
PspPI	GGNCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
PspPPI	RGGWCCY	3 cut(s)	1711, 2173, 3742
PspXI	VCTCGAGB	1 cut(s)	1790
PstI	CTGCAG	3 cut(s)	3178, 3957, 4159
PstNI	CAGNNNCTG	1 cut(s)	70
PsuI	RGATCY	4 cut(s)	35, 2253, 2457, 2512
PteI	GCGCGC	2 cut(s)	3874, 3876
RsaI	GTAC	9 cut(s)	126, 516, 1091, 1585, 1829, 2388, 2751, 3988, 4136
RsaNI	GTAC	9 cut(s)	125, 515, 1090, 1584, 1828, 2387, 2750, 3987, 4135
RseI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 2897, 4037
SapI	GCTCTTC	1 cut(s)	479
Sau96I	GGNCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
ScaI	AGTACT	3 cut(s)	516, 2388, 4136
SchI	GAGTC	4 cut(s)	279, 1434, 3014, 3791
ScrFI	CCNGG	7 cut(s)	22, 537, 1938, 2141, 2510, 2872, 3728
SduI	GDGCHC	7 cut(s)	141, 258, 1045, 1545, 2713, 3296, 3556
SfaNI	GCATC	9 cut(s)	393, 1088, 1216, 1290, 2147, 2272, 2314, 2491, 3932
Sfr274I	CTCGAG	1 cut(s)	1790
SfuI	TTCGAA	1 cut(s)	1720
SinI	GGWCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
SlaI	CTCGAG	1 cut(s)	1790
SmiMI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 2897, 4037
SmlI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3660
SmoI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3660
SpeI	ACTAGT	1 cut(s)	2164
SphI	GCATGC	1 cut(s)	1641
SseBI	AGGCCT	1 cut(s)	3624
SsiI	CCGC	7 cut(s)	240, 1319, 1742, 2251, 3161, 3789, 4087
SspI	AATATT	5 cut(s)	1654, 1675, 2032, 2104, 2930
SspMI	CTAG	9 cut(s)	197, 518, 1278, 1328, 1449, 1463, 2165, 3093, 3329
StuI	AGGCCT	1 cut(s)	3624
StyD4I	CCNGG	7 cut(s)	20, 535, 1936, 2139, 2508, 2870, 3726
StyI	CCWWGG	4 cut(s)	1344, 1758, 2739, 3745
TaiI	ACGT	2 cut(s)	2669, 3264
TatI	WGTACW	7 cut(s)	124, 514, 1583, 1827, 2386, 3986, 4134
TauI	GCSGC	1 cut(s)	3792
TfiI	GAWTC	7 cut(s)	638, 1067, 2077, 2227, 2729, 3356, 4160
TseFI	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 3262, 4052
Tsp45I	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 3262, 4052
TspGWI	ACGGA	6 cut(s)	1304, 1647, 2463, 2982, 3017, 4071
VneI	GTGCAC	3 cut(s)	254, 2709, 3292
VpaK11BI	GGWCC	6 cut(s)	18, 962, 1711, 2173, 3703, 3742
XagI	CCTNNNNNAGG	2 cut(s)	2743, 3405
XceI	RCATGY	3 cut(s)	1641, 1667, 3343
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3393
XhoI	CTCGAG	1 cut(s)	1790
XmiI	GTMKAC	1 cut(s)	3539
XmnI	GAANNNNTTC	1 cut(s)	2103
XspI	CTAG	9 cut(s)	197, 518, 1278, 1328, 1449, 1463, 2165, 3093, 3329
ZrmI	AGTACT	3 cut(s)	516, 2388, 4136
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.