Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

22372054 .. 22378601

Gene Structure 6548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g30860.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4428 bp

ATGATGGAGGATTTATGGACTCTGTTTTGTGGGGAATCTGGAGGTTCAGAGAGTTTGGATTTTCAGTTTCTGGTTCATCCTTCTTCATGCATTAATCACGCGTTAATAATTTTCCTAGACATTGTTCTTCTTGTGGTACTCTTGTTCAGTATGTTTCTCAAGTCATCAAAATCAGTTCATGTTCCAGCACGATTTCGAGGGTTTTCTGGTTTGCAAATAGTCTCGATCATTTTCAATGGCGGTCTTGGATTTGTGTACTTCTGCTTGGGAGCCTGGATTCTAGAAGAGAAGCTGAGGAATACTCGGACTGCTTTGCCTTTGAATCGGTGGTTACTTGGTCTTTTTCAAGGCTTCACATGGTTGTTTTTGAGCTTAACTCTAAGCCTCAGGGTGAAGCAACTCCCAAGACAGCCTTCAAGACTGTTGTCCATCCTTGCATTTTTGTTCTCTGGAGTTGTCTTTGCTCTATCACTCTTTGCTGTCATTTTCGGAAATGAAATGTCAGTTAAGATAGTACTGGATATCCTGACTTTCCCAGGAGCAGCATTGTTGCTGCTATGTGTTTTCAAGGGGTATAAGTATGAAGAAGGTGATGAGATCATCAGTGACAATGGCCTTTATGCCCCTCTCAATGGTGAGTCCAATGGCATTAGTAAAGGTAATGATCATGCAACCCCATTCAGCAAAGCTGGTTTATTCAGTAAAATGTCATTTTGGTGGTTAAATTCATTGATGAAAAGAGGTAGGGAGAAAACTCTGGAGGATGAAGATATACCGAAGTTGCGGAAGGAAGATCGAGCAGAAAGTTGTTATGAGATGTTCTTGGAGCAACTAAGCAAGCAGAAACAAATTGAGCCATCTTCCCAGCCATCAGTGTTAAAGATTATAATCCTATGCCACTGGAAGGAGATTTTACTATCTGGTTTCTTTGCTTTGTTGAAGATACTCACTATCTGTGCTGGTCCTTTGCTTCTCAATGCCTTCATTTTAGTTGCAGAGGGAAATGAAAGTTTCAAGCATGAAGGTTATCTATTAGCCGGAGCACTTTTTGTGTCGAAAACCATTGAATCCTTGTCACAAAGGCAGTGGTACTTCAGGTGCAGGCTCATCGGTTTGAAAGTTAGGTCTTTGCTGACAGCAGCCATTTACAAAAAGCAATTGAGGCTATCTAATGCTGCTAAGTTGACACACTCAGGTGGTGAGATTATGAATTATGTTACAGTAGATGCTTATAGAATTGGAGAGTTTCCATTTTGGTTCCATCAGACTTGGACTACTAGCATCCAGCTCTGTTTCTCTTTGGTGATTCTTTTCCGTGCAGTTGGCCTAGCTACATTTGCAGCCTTGGTGGTGATACTTTTGAGTGTGATTTGCAATGCTCCAGTTGCTAAGCTACAACATAAGTTCCAGAGTAAGCTGATGAAGGCACAAGATGAAAGGCTCAAGGCTATTTCTGAGGCTCTAGTGAATATGAAGGTCTTAAAGTTATATGCATGGGAAACACATTTCAAGAAGGCAATTGAAAAGTTAAGGAAGGAGGAGCACAAATGGTTATCTGCAATGCTGTTAAGAAGAGCATATAGTACTTATCTCTTTTGGTCAACTCCTGTTCTGGTCTCTACTGCAACATTTGGGGCATGCTACCTTCTTAAAATTCCACTACATGCAAACAATGTTTTCACTTTTATCTCAACTTTGAGACTTGTTCAGGATCCCATCCGAACCATACCTGATGTTTTTGCGGTTGTGATTCAAGCCAAGGTCGCATTTGGTCGTATTGTGAAATTCCTTGAGGCACCTGAGCTGCAACCTTCAAATGTCCGGAAGTGCAACATGCAGAATGTAGCTAACTCCATTGAAATTAAGTCAGCTAATTTTTCATGGGAAGCGAATGCAGCGAAGCCCATACTGAGAAATATAAATTTAGAGGTTAGACCAGGTGAAAAGGTGGCTATATGCGGTGAAGTCGGTTCTGGTAAATCAAGCCTTCTAGCTGCAATTCTTGGAGAAATTCCAACTGTGCAAGGAAATATTCAAGTTTATGGGAAGATTGCCTATGTTTCTCAAACAGCATGGATCCAGTCAGGAACTATACAGGAAAATATTCTCTTCGGTTCTTGTATGGATAGTGAACGATACCGAGAAACACTTGAGAGATGTTCACTTGTAAAGGACCTTGAGCTACTGCCTTATGGTGATCTTACTGAAATAGGGGAGAGAGGGGTGAATCTAAGTGGAGGTCAGAAGCAGCGGATCCAACTTGCACGCGCACTCTATCAGGATGCTGATATTTATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTATTTAATGATTATGTAATGGAAGCACTTTCAGGCAAGACAGTACTACTTGTGACCCATCAAGTTGATTTCCTGCCTGCATTTGATTTCGTTTTGTTGATGATGGATGGGGAGATCCTACAAGCAGCTCCTTATCAGCATCTATTGGCTTTAAGCCAAGAATTCCAGGACCTTGTCAATGCACACAAAGAAACTGCTGGTGCCGAAAGGCTTTCAGATGTCACTTCTGCTCAGAATTCTGCAATATCTTCAAGGGAGATCAAGAAGAGTTATGTGGAGAAGCCATTAAAAGAAAATAAAGGTGACCAATTGATTAAACTAGAAGAGAGAGAAACAGGAGACACAGGTTTTAAGCCATACATACTGTATCTGAAACAGAACAAAGGGTTCTTGTACTTCTCAATTGCCGTTTGTCTACACTTCACTTTCATTATGAGTCAGATTGCACAGAACTCTTGGATGGCTGCTAATGTTGATAATCCGAATATTAGCACATTGCGGTTGCTTGTGGTTTACTTATCGATTGGATTCTCCGCTACATTTATATTTCTGTTTAGATCTCTTGCAGCAGTTGTTGGGGGTCTAGAAACATCTAAGTCTTTGTTCTCACAACTACTGAACTCCCTTTTCCGTGCACCCATGTCATTCTATGACTCAACACCACTGGGAAGGATACTTAGTCGGGTTTCATCTGATCTGAGTATCACTGATCTTGATATTCCATTCAGCATAGTATTTGCTTGTGGAGCTACCATGAATGCCTATTGCAATCTTGGAGTATTGACTGTTGTTACTTGGCAAGTTCTGTTTGTCTCCATACCAATGGTCTGTGTCGCAATTCAGCTACAGAAATATTACTTTTCCACTGCAAAAGAGTTGATGAGGATCAATGGAACAACCAAGTCTTTTGTGGCAAACCATCTCGCAGAGTCCGTCTCAGGTGCCATTACCATAAGAGCTTTCAATGAAGAAGAGCGCTTCTCGGCAAAGAACTTTCAGCTCATTGACACAAATGCTAGTCCCTATTTCCACAGTTTTTCCGCAAATGAGTGGTTAATCCAACGATTAGAGATAATCAGCGCCGCGGTTCTTGCCTCTGCAGCACTTTGTATGGTTTTACTTCCTCATGGAACTTTCACCTCTGGATTTATTGGGATGGCACTTTCTTACGGTCTATCATTAAACGTGTCCTTGATCAACTCAATTCAGAACCAGTGCACCATAGCAAATTACATAATTTCTGTTGAAAGACTAAACCAATATATGAACATTCCTAGTGAAGCCCCAGAAGTAGTAGAGGGAAACCGTCCACCGGCCAACTGGCCTGTTGTTGGAAAAGTGGAGATACAAAATTTGCAGATAAGATATAGGGAAGACACACCGCTTGTTCTTCGAGGTATCAGCTGTGTTTTTGAGGGAGGGCACAAGATTGGGATTGTTGGTAGGACAGGCAGTGGGAAGTCTACACTAATCGGTGCTCTTTTTCGTCTGGTTGAGCCAGCCGGAGGGAAGATCATAGTTGATGGCATTGACATTTGCACTATAGGACTTCATGATCTAAGGTCAAAATTTGGAATTATACCTCAAGACCCTACTCTCTTTAATGGGACTGTCAGATACAATTTGGACCCCTTATCTCAACATTCAGACCAGGAAATATGGGAGGTTCTTGGGAAGTGTCAGCTTCGAGAGCCTGTTGAGGAGAAAGAAAAAGGCTTGGATTCATTAGTTGTGGATGATGGATCAAACTGGAGCATGGGGCAAAGGCAACTGTTCTGCCTCGGCCGCGCGCTTTTAAGGAGGAGCCGGGTATTGGTGCTCGATGAAGCAACTGCATCCATTGACAATGCAACTGATACGATCCTGCAAAAGACTATAAGGACTGAGTTTGAAACTTGTACAGTAATTACAGTAGCTCACAGGATACCAACTGTAATGGATTGCACAATGGTTCTTGCCATTAGTGATGGAAAAATCGTGGAGTATGATGAGCCAACGAAGTTGATGAAGAGAGAAAGCTCGCTGTTTGCACAGCTTGTCAAGGAGTACTGGTCTCATCTCCAGTCTGCAGAATCACATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1476

Amino Acids

164.81

Weight (kDa)

7.67

Isoelectric Point (pI)

35.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABCC10_N	PF24358	2 - 194	5.1e-79	ABCC10 N-terminal domain
ABC_membrane	PF00664	305 - 572	1.3e-24	ABC transporter transmembrane region
ABC_tran	PF00005	637 - 771	1.2e-22	ABC transporter
ABC_membrane	PF00664	912 - 1171	2.5e-24	ABC transporter transmembrane region
ABC_tran	PF00005	1245 - 1393	3.3e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
AccB1I	GGYRCC	3 cut(s)	1795, 2543, 3284
AccI	GTMKAC	2 cut(s)	2758, 3806
AccII	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
AccIII	TCCGGA	1 cut(s)	1821
AcoI	YGGCCR	2 cut(s)	3657, 4126
AcsI	RAATTY	9 cut(s)	724, 1653, 1784, 1921, 2010, 2504, 2578, 3694, 3911
AcuI	CTGAAG	1 cut(s)	1078
AfaI	GTAC	9 cut(s)	138, 257, 516, 1091, 1585, 2388, 2738, 4243, 4391
AfeI	AGCGCT	1 cut(s)	3320
AfiI	CCNNNNNNNGG	6 cut(s)	632, 904, 3655, 3674, 3848, 4156
AflIII	ACRYGT	2 cut(s)	99, 3528
AjnI	CCWGG	5 cut(s)	272, 535, 1936, 2508, 3993
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AleI	CACNNNNGTG	1 cut(s)	1194
Alw21I	GWGCWC	6 cut(s)	1045, 1545, 2980, 3563, 3823, 4164
Alw26I	GTCTC	7 cut(s)	226, 1621, 1693, 2676, 3160, 3283, 4401
Alw44I	GTGCAC	2 cut(s)	2976, 3559
AlwNI	CAGNNNCTG	1 cut(s)	70
Aor13HI	TCCGGA	1 cut(s)	1821
Aor51HI	AGCGCT	1 cut(s)	3320
AoxI	GGCC	5 cut(s)	613, 1324, 3657, 3665, 4126
ApaLI	GTGCAC	2 cut(s)	2976, 3559
ApoI	RAATTY	9 cut(s)	724, 1653, 1784, 1921, 2010, 2504, 2578, 3694, 3911
AseI	ATTAAT	1 cut(s)	93
Asp700I	GAANNNNTTC	1 cut(s)	2103
AspLEI	GCGC	5 cut(s)	2270, 3321, 3425, 4133, 4135
AspS9I	GGNCC	4 cut(s)	962, 2173, 2512, 3970
AsuC2I	CCSGG	1 cut(s)	4151
AvaII	GGWCC	4 cut(s)	962, 2173, 2512, 3970
AxyI	CCTNAGG	1 cut(s)	386
BaeGI	GKGCMC	3 cut(s)	2980, 3563, 3768
BaeI	ACNNNNGTAYC	2 cut(s)	128, 161
BamHI	GGATCC	3 cut(s)	1711, 2076, 2253
BanI	GGYRCC	3 cut(s)	1795, 2543, 3284
BbsI	GAAGAC	1 cut(s)	3723
Bbv12I	GWGCWC	6 cut(s)	1045, 1545, 2980, 3563, 3823, 4164
BbvCI	CCTCAGC	1 cut(s)	293
BceAI	ACGGC	1 cut(s)	2735
BcgI	CGANNNNNNTGC	2 cut(s)	1090, 1124
BciT130I	CCWGG	5 cut(s)	274, 537, 1938, 2510, 3995
BciVI	GTATCC	2 cut(s)	3009, 4260
BclI	TGATCA	2 cut(s)	664, 3537
BcnI	CCSGG	1 cut(s)	4151
BcoDI	GTCTC	7 cut(s)	226, 1621, 1693, 2676, 3160, 3283, 4401
BfmI	CTRYAG	4 cut(s)	3188, 3441, 3885, 4410
BfoI	RGCGCY	2 cut(s)	3322, 3426
BfuI	GTATCC	2 cut(s)	3009, 4260
BglII	AGATCT	1 cut(s)	2900
BlpI	GCTNAGC	1 cut(s)	1389
BmcAI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
Bme1390I	CCNGG	6 cut(s)	274, 537, 1938, 2510, 3995, 4151
Bme18I	GGWCC	4 cut(s)	962, 2173, 2512, 3970
BmgT120I	GGNCC	4 cut(s)	962, 2173, 2512, 3970
BmrFI	CCNGG	6 cut(s)	274, 537, 1938, 2510, 3995, 4151
BmrI	ACTGGG	1 cut(s)	3017
BmsI	GCATC	6 cut(s)	1216, 1290, 2272, 2314, 2491, 4187
BmuI	ACTGGG	1 cut(s)	3017
BoxI	GACNNNNGTC	1 cut(s)	424
BpiI	GAAGAC	1 cut(s)	3723
BplI	GAGNNNNNCTC	8 cut(s)	286, 318, 361, 393, 3263, 3295, 3308, 3340
BpmI	CTGGAG	6 cut(s)	60, 471, 779, 1365, 4114, 4388
Bpu10I	CCTNAGC	2 cut(s)	293, 1800
Bpu1102I	GCTNAGC	1 cut(s)	1389
BpuEI	CTTGAG	6 cut(s)	143, 1427, 1811, 2171, 2198, 3912
BpuMI	CCSGG	1 cut(s)	4151
Bsa29I	ATCGAT	1 cut(s)	2864
BsaBI	GATNNNNATC	3 cut(s)	887, 2292, 3227
BsaI	GGTCTC	2 cut(s)	1621, 4401
BsaJI	CCNNGG	5 cut(s)	535, 1344, 1758, 3426, 4123
BsaWI	WCCGGW	1 cut(s)	1821
BsaXI	ACNNNNNCTCC	2 cut(s)	4379, 4409
Bsc4I	CCNNNNNNNGG	6 cut(s)	632, 904, 3655, 3674, 3848, 4156
Bse118I	RCCGGY	1 cut(s)	3655
Bse21I	CCTNAGG	1 cut(s)	386
Bse3DI	GCAATG	3 cut(s)	1381, 1566, 2837
Bse8I	GATNNNNATC	3 cut(s)	887, 2292, 3227
BseAI	TCCGGA	1 cut(s)	1821
BseBI	CCWGG	5 cut(s)	274, 537, 1938, 2510, 3995
BseCI	ATCGAT	1 cut(s)	2864
BseDI	CCNNGG	5 cut(s)	535, 1344, 1758, 3426, 4123
BseJI	GATNNNNATC	3 cut(s)	887, 2292, 3227
BseLI	CCNNNNNNNGG	6 cut(s)	632, 904, 3655, 3674, 3848, 4156
BseMI	GCAATG	3 cut(s)	1381, 1566, 2837
BsePI	GCGCGC	1 cut(s)	4131
BseRI	GAGGAG	3 cut(s)	1553, 4058, 4159
BseSI	GKGCMC	3 cut(s)	2980, 3563, 3768
BseX3I	CGGCCG	1 cut(s)	4126
BseYI	CCCAGC	1 cut(s)	864
BsgI	GTGCAG	2 cut(s)	1120, 1338
Bsh1236I	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
Bsh1285I	CGRYCG	1 cut(s)	4129
BshFI	GGCC	5 cut(s)	615, 1326, 3659, 3667, 4128
BshNI	GGYRCC	3 cut(s)	1795, 2543, 3284
BshVI	ATCGAT	1 cut(s)	2864
BsiEI	CGRYCG	1 cut(s)	4129
BsiHKAI	GWGCWC	6 cut(s)	1045, 1545, 2980, 3563, 3823, 4164
BsiSI	CCGG	5 cut(s)	1038, 1822, 3656, 3846, 4150
BslFI	GGGAC	2 cut(s)	3348, 3964
BslI	CCNNNNNNNGG	6 cut(s)	632, 904, 3655, 3674, 3848, 4156
BsmAI	GTCTC	7 cut(s)	226, 1621, 1693, 2676, 3160, 3283, 4401
BsmBI	CGTCTC	1 cut(s)	3283
BsmFI	GGGAC	2 cut(s)	3348, 3964
BsmI	GAATGC	2 cut(s)	1897, 3106
BsnI	GGCC	5 cut(s)	615, 1326, 3659, 3667, 4128
Bso31I	GGTCTC	2 cut(s)	1621, 4401
Bsp1286I	GDGCHC	7 cut(s)	1045, 1545, 2980, 3563, 3768, 3823, 4164
Bsp13I	TCCGGA	1 cut(s)	1821
Bsp1407I	TGTACA	1 cut(s)	4241
Bsp1720I	GCTNAGC	1 cut(s)	1389
BspANI	GGCC	5 cut(s)	615, 1326, 3659, 3667, 4128
BspDI	ATCGAT	1 cut(s)	2864
BspEI	TCCGGA	1 cut(s)	1821
BspFNI	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
BspHI	TCATGA	1 cut(s)	3895
BspMAI	CTGCAG	2 cut(s)	3445, 4414
BspQI	GCTCTTC	2 cut(s)	1567, 3309
BspT107I	GGYRCC	3 cut(s)	1795, 2543, 3284
BspTNI	GGTCTC	2 cut(s)	1621, 4401
BsrDI	GCAATG	3 cut(s)	1381, 1566, 2837
BsrFI	RCCGGY	1 cut(s)	3655
BsrGI	TGTACA	1 cut(s)	4241
BssAI	RCCGGY	1 cut(s)	3655
BssECI	CCNNGG	5 cut(s)	535, 1344, 1758, 3426, 4123
BssHII	GCGCGC	1 cut(s)	4131
BssT1I	CCWWGG	2 cut(s)	1344, 1758
Bst2UI	CCWGG	5 cut(s)	274, 537, 1938, 2510, 3995
Bst6I	CTCTTC	7 cut(s)	279, 1567, 2114, 2603, 2661, 3309, 4346
BstAPI	GCANNNNNTGC	1 cut(s)	2333
BstAUI	TGTACA	1 cut(s)	4241
BstC8I	GCNNGC	8 cut(s)	839, 1103, 1639, 2266, 2421, 3843, 4133, 4364
BstDSI	CCRYGG	1 cut(s)	3426
BstEII	GGTNACC	1 cut(s)	2645
BstFNI	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
BstH2I	RGCGCY	2 cut(s)	3322, 3426
BstHHI	GCGC	5 cut(s)	2270, 3321, 3425, 4133, 4135
BstMAI	GTCTC	7 cut(s)	226, 1621, 1693, 2676, 3160, 3283, 4401
BstMCI	CGRYCG	1 cut(s)	4129
BstNI	CCWGG	5 cut(s)	274, 537, 1938, 2510, 3995
BstNSI	RCATGY	3 cut(s)	1641, 1667, 1837
BstPAI	GACNNNNGTC	1 cut(s)	424
BstPI	GGTNACC	1 cut(s)	2645
BstSCI	CCNGG	6 cut(s)	272, 535, 1936, 2508, 3993, 4149
BstSFI	CTRYAG	4 cut(s)	3188, 3441, 3885, 4410
BstSLI	GKGCMC	3 cut(s)	2980, 3563, 3768
BstUI	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
BstV2I	GAAGAC	1 cut(s)	3723
BstX2I	RGATCY	5 cut(s)	1711, 2076, 2253, 2457, 2900
BstXI	CCANNNNNNTGG	1 cut(s)	3166
BstYI	RGATCY	5 cut(s)	1711, 2076, 2253, 2457, 2900
BstZI	CGGCCG	1 cut(s)	4126
Bsu15I	ATCGAT	1 cut(s)	2864
Bsu36I	CCTNAGG	1 cut(s)	386
BsuI	GTATCC	2 cut(s)	3009, 4260
BsuRI	GGCC	5 cut(s)	615, 1326, 3659, 3667, 4128
BsuTUI	ATCGAT	1 cut(s)	2864
BtgI	CCRYGG	1 cut(s)	3426
BtsI	GCAGTG	3 cut(s)	1091, 3207, 3802
Cac8I	GCNNGC	8 cut(s)	839, 1103, 1639, 2266, 2421, 3843, 4133, 4364
CaiI	CAGNNNCTG	1 cut(s)	70
CciI	TCATGA	1 cut(s)	3895
CfoI	GCGC	5 cut(s)	2270, 3321, 3425, 4133, 4135
Cfr10I	RCCGGY	1 cut(s)	3655
Cfr13I	GGNCC	4 cut(s)	962, 2173, 2512, 3970
Cfr42I	CCGCGG	1 cut(s)	3429
ClaI	ATCGAT	1 cut(s)	2864
CsiI	ACCWGGT	1 cut(s)	1936
Csp6I	GTAC	9 cut(s)	137, 256, 515, 1090, 1584, 2387, 2737, 4242, 4390
CspCI	CAANNNNNGTGG	2 cut(s)	1067, 1102
CviQI	GTAC	9 cut(s)	137, 256, 515, 1090, 1584, 2387, 2737, 4242, 4390
EaeI	YGGCCR	2 cut(s)	3657, 4126
EagI	CGGCCG	1 cut(s)	4126
Eam1104I	CTCTTC	7 cut(s)	279, 1567, 2114, 2603, 2661, 3309, 4346
EarI	CTCTTC	7 cut(s)	279, 1567, 2114, 2603, 2661, 3309, 4346
EclXI	CGGCCG	1 cut(s)	4126
Eco130I	CCWWGG	2 cut(s)	1344, 1758
Eco31I	GGTCTC	2 cut(s)	1621, 4401
Eco32I	GATATC	1 cut(s)	523
Eco47I	GGWCC	4 cut(s)	962, 2173, 2512, 3970
Eco47III	AGCGCT	1 cut(s)	3320
Eco52I	CGGCCG	1 cut(s)	4126
Eco57I	CTGAAG	1 cut(s)	1078
Eco81I	CCTNAGG	1 cut(s)	386
Eco91I	GGTNACC	1 cut(s)	2645
EcoO109I	RGGNCCY	2 cut(s)	2173, 2512
EcoO65I	GGTNACC	1 cut(s)	2645
EcoRI	GAATTC	2 cut(s)	2504, 2578
EcoRII	CCWGG	5 cut(s)	272, 535, 1936, 2508, 3993
EcoRV	GATATC	1 cut(s)	523
EcoT14I	CCWWGG	2 cut(s)	1344, 1758
EcoT22I	ATGCAT	2 cut(s)	92, 1495
ErhI	CCWWGG	2 cut(s)	1344, 1758
Esp3I	CGTCTC	1 cut(s)	3283
FalI	AAGNNNNNCTT	2 cut(s)	397, 429
FaqI	GGGAC	2 cut(s)	3348, 3964
FbaI	TGATCA	2 cut(s)	664, 3537
FblI	GTMKAC	2 cut(s)	2758, 3806
GlaI	GCGC	5 cut(s)	2269, 3320, 3424, 4132, 4134
GsaI	CCCAGC	1 cut(s)	868
GsuI	CTGGAG	6 cut(s)	60, 471, 779, 1365, 4114, 4388
HaeII	RGCGCY	2 cut(s)	3322, 3426
HaeIII	GGCC	5 cut(s)	615, 1326, 3659, 3667, 4128
HapII	CCGG	5 cut(s)	1038, 1822, 3656, 3846, 4150
HhaI	GCGC	5 cut(s)	2270, 3321, 3425, 4133, 4135
Hin6I	GCGC	5 cut(s)	2268, 3319, 3423, 4131, 4133
HinP1I	GCGC	5 cut(s)	2268, 3319, 3423, 4131, 4133
HincII	GTYRAC	2 cut(s)	1185, 1602
HindII	GTYRAC	2 cut(s)	1185, 1602
HpaII	CCGG	5 cut(s)	1038, 1822, 3656, 3846, 4150
HpyCH4IV	ACGT	1 cut(s)	3528
HpySE526I	ACGT	1 cut(s)	3528
HspAI	GCGC	5 cut(s)	2268, 3319, 3423, 4131, 4133
Kpn2I	TCCGGA	1 cut(s)	1821
Ksp22I	TGATCA	2 cut(s)	664, 3537
KspI	CCGCGG	1 cut(s)	3429
LguI	GCTCTTC	2 cut(s)	1567, 3309
LweI	GCATC	6 cut(s)	1216, 1290, 2272, 2314, 2491, 4187
MabI	ACCWGGT	1 cut(s)	1936
MaeII	ACGT	1 cut(s)	3528
MaeIII	GTNAC	8 cut(s)	330, 605, 1074, 1216, 2395, 2563, 2645, 3133
MfeI	CAATTG	4 cut(s)	1157, 1518, 2651, 2745
MflI	RGATCY	5 cut(s)	1711, 2076, 2253, 2457, 2900
MhlI	GDGCHC	7 cut(s)	1045, 1545, 2980, 3563, 3768, 3823, 4164
MluI	ACGCGT	1 cut(s)	99
MlyI	GAGTC	5 cut(s)	13, 647, 2788, 2990, 3281
MmeI	TCCRAC	4 cut(s)	2039, 2281, 3427, 3655
Mph1103I	ATGCAT	2 cut(s)	92, 1495
MroI	TCCGGA	1 cut(s)	1821
MroXI	GAANNNNTTC	1 cut(s)	2103
MslI	CAYNNNNRTG	4 cut(s)	715, 1194, 3164, 4423
MspA1I	CMGCKG	3 cut(s)	2251, 3428, 3747
MspI	CCGG	5 cut(s)	1038, 1822, 3656, 3846, 4150
MspR9I	CCNGG	6 cut(s)	274, 537, 1938, 2510, 3995, 4151
MunI	CAATTG	4 cut(s)	1157, 1518, 2651, 2745
Mva1269I	GAATGC	2 cut(s)	1897, 3106
MvaI	CCWGG	5 cut(s)	274, 537, 1938, 2510, 3995
MvnI	CGCG	5 cut(s)	101, 2268, 3428, 4131, 4133
NciI	CCSGG	1 cut(s)	4151
NmeAIII	GCCGAG	2 cut(s)	3305, 4104
NmuCI	GTSAC	5 cut(s)	605, 1074, 2395, 2563, 2645
NsiI	ATGCAT	2 cut(s)	92, 1495
NspI	RCATGY	3 cut(s)	1641, 1667, 1837
OliI	CACNNNNGTG	1 cut(s)	1194
PaeI	GCATGC	1 cut(s)	1641
PagI	TCATGA	1 cut(s)	3895
PauI	GCGCGC	1 cut(s)	4131
PciSI	GCTCTTC	2 cut(s)	1567, 3309
PcsI	WCGNNNNNNNCGW	1 cut(s)	3273
PctI	GAATGC	2 cut(s)	1897, 3106
PdmI	GAANNNNTTC	1 cut(s)	2103
PflFI	GACNNNGTC	1 cut(s)	2516
PfoI	TCCNGGA	1 cut(s)	2508
PleI	GAGTC	5 cut(s)	13, 646, 2787, 2990, 3280
PpsI	GAGTC	5 cut(s)	13, 646, 2787, 2990, 3280
PpuMI	RGGWCCY	2 cut(s)	2173, 2512
PshAI	GACNNNNGTC	1 cut(s)	424
PshBI	ATTAAT	1 cut(s)	93
PsiI	TTATAA	1 cut(s)	887
Psp5II	RGGWCCY	2 cut(s)	2173, 2512
Psp6I	CCWGG	5 cut(s)	272, 535, 1936, 2508, 3993
PspEI	GGTNACC	1 cut(s)	2645
PspFI	CCCAGC	1 cut(s)	864
PspGI	CCWGG	5 cut(s)	272, 535, 1936, 2508, 3993
PspPI	GGNCC	4 cut(s)	962, 2173, 2512, 3970
PspPPI	RGGWCCY	2 cut(s)	2173, 2512
PstI	CTGCAG	2 cut(s)	3445, 4414
PstNI	CAGNNNCTG	1 cut(s)	70
PsuI	RGATCY	5 cut(s)	1711, 2076, 2253, 2457, 2900
PsyI	GACNNNGTC	1 cut(s)	2516
PteI	GCGCGC	1 cut(s)	4131
PvuII	CAGCTG	1 cut(s)	3747
RsaI	GTAC	9 cut(s)	138, 257, 516, 1091, 1585, 2388, 2738, 4243, 4391
RsaNI	GTAC	9 cut(s)	137, 256, 515, 1090, 1584, 2387, 2737, 4242, 4390
RseI	CAYNNNNRTG	4 cut(s)	715, 1194, 3164, 4423
SacII	CCGCGG	1 cut(s)	3429
SapI	GCTCTTC	2 cut(s)	1567, 3309
Sau96I	GGNCC	4 cut(s)	962, 2173, 2512, 3970
ScaI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
SchI	GAGTC	5 cut(s)	13, 647, 2788, 2990, 3281
ScrFI	CCNGG	6 cut(s)	274, 537, 1938, 2510, 3995, 4151
SduI	GDGCHC	7 cut(s)	1045, 1545, 2980, 3563, 3768, 3823, 4164
SexAI	ACCWGGT	1 cut(s)	1936
SfaNI	GCATC	6 cut(s)	1216, 1290, 2272, 2314, 2491, 4187
SfcI	CTRYAG	4 cut(s)	3188, 3441, 3885, 4410
Sfr303I	CCGCGG	1 cut(s)	3429
SgrBI	CCGCGG	1 cut(s)	3429
SinI	GGWCC	4 cut(s)	962, 2173, 2512, 3970
SmiMI	CAYNNNNRTG	4 cut(s)	715, 1194, 3164, 4423
SmlI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3927
SmoI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3927
SphI	GCATGC	1 cut(s)	1641
SspI	AATATT	4 cut(s)	2032, 2104, 2830, 3197
StyD4I	CCNGG	6 cut(s)	272, 535, 1936, 2508, 3993, 4149
StyI	CCWWGG	2 cut(s)	1344, 1758
TaiI	ACGT	1 cut(s)	3531
TaqI	TCGA	8 cut(s)	196, 224, 796, 1055, 2864, 3736, 4030, 4164
TatI	WGTACW	7 cut(s)	255, 514, 1583, 2386, 2736, 4241, 4389
TauI	GCSGC	2 cut(s)	3428, 4131
TseFI	GTSAC	5 cut(s)	605, 1074, 2395, 2563, 2645
Tsp45I	GTSAC	5 cut(s)	605, 1074, 2395, 2563, 2645
TspGWI	ACGGA	3 cut(s)	1304, 2963, 3265
Tth111I	GACNNNGTC	1 cut(s)	2516
VneI	GTGCAC	2 cut(s)	2976, 3559
VpaK11BI	GGWCC	4 cut(s)	962, 2173, 2512, 3970
VspI	ATTAAT	1 cut(s)	93
XapI	RAATTY	9 cut(s)	724, 1653, 1784, 1921, 2010, 2504, 2578, 3694, 3911
XbaI	TCTAGA	2 cut(s)	280, 2926
XceI	RCATGY	3 cut(s)	1641, 1667, 1837
XcmI	CCANNNNNNNNNTGG	2 cut(s)	3250, 3660
XmiI	GTMKAC	2 cut(s)	2758, 3806
XmnI	GAANNNNTTC	1 cut(s)	2103
ZrmI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
Zsp2I	ATGCAT	2 cut(s)	92, 1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.