Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

36869707 .. 36876028

Gene Structure 6322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g44230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4431 bp

ATGACGGGGGATTTATGGACCGCGTTTTGTGGGGAATCTGGAGCTTCAGAGAGTTTTAACTTTCAGTTTCTGGTTCATCCTTCTTCATGCGTTAATCACGCGTTGATAATTTTCCTAGACATTGTACTTCTTGTGGTGCTCTTGTTCACTGTGTTTCTCAAGTCATCAAAAACAGTTCATGTTCCAGCCCGATTTCTAGGCTTTTCGAGTTGGCAAATAGTCTCGGCCATTTTCAATGGCGGTCTTGTATTTGTGCACTTGTGCTTGGGAGTCTGGAATTTAGAAGAGAAGCTGAGGTATTCACACACTGTTTTGCCTTTGAATTGGTGGTTACTTGGTATTTTTCAAGGCTTCACATGGTTGTTTTTGAGTTTAACTCTAAGCATCAGGGTGAAGAAACTTCCAAGACAGCCTTCAAGACTGCTGTCCATCCTTGCATTTTTGTTCTCCGGAGTTGTCTTTGCTCTATCGCTCTTTGCTGTCATTTTCAGAAATGAAATATCAGTTGAGATAGTACTAGATATCCTGACTTTCCCAGGAGCAGCATTGTTGCTGTTATGTGTTTTCAAGGGGTATAAGTATGAAGACGGTGAGGAGATCATCAGTGACAATGGCCTTTATGCCCCTTTAAATGGTGAGTCCAATGGCAATAGTGAAGGTAATGATCATACAACCCCATTCAGCAAAGCTGGTTTATTCAGTAGAATGTCATTCTGGTGGTTAAATTCATTGATGAAAAGAGGTAAGGAGAAAACTCTGGAGGATGAAGATATACCGGAGTTGCGCAAGGAAGATCGAGCAGAAAGTTGTTATGGGATGTTTCTGGAGCAACTGAGCAAGCAGAAAAAAATTGGACCAAATTCGCAGCCATCAGTGTTAAGGATTCTAATCCTATGCCACTGGAAGGAGATTTTACTATCTGGTTTCTTTGCGTTGCTGAAGATACTCTCTCTCTGTGCTGGTCCTCTGCTTCTCAATGCCTTCATTTTGGTTGCAGAGGGAAATGCAAGTTTCGAGCATGAAGGTTATCTGTTAGCCGGAGCACTTTTTGTTTTGAAAACCATTGAATCCTTGTCACAAAGGCAGTGGTACTTCAGGTGCAGGCTTATTGGTTTGAAAGTTAGGTCTTTGCTGTCAGCAGCCATTTACAAAAAGCAATTGAGATTATCTAATGCTGCTAAGTTGACACACTCAGGTGGTGAGATTATGAATTATGTTACTGTTGATGCGTATAGGATTGGAGAATTCCCATTTTGGTTCCATCAGACTTGGACTACTAGCGTCCAGCTCTGTTTTTCTTTGGTAATTCTTTTCCGTGCGGTCGGCCTAGCTACATTTGCAGCCTTGGTGATGATACTTTTTAGTATTATTTTGAATGCTCCACTTGCAAAGCTACAACATAGGTTTCAGAGTAAGCTTATGAAGGCACAAGATGAAAGACTCAAGGCTAGTTCTGAGGCTCTAGTGAACATGAAGGTCTTAAAGTTATATGCATGGGAAACACATTTCAGGAAGGCAATAGAGAAGTTACGGAAAGAGGAGCACAAATGGTTATCTGCAATGCTGTTCAGAAAAGCATATAGTACTTTCCTCTTTTGGACAACTCCTGCTTTAGTCTCTGCTGCAACATTTGGGGCATGCTATTTGCTCAATATTCCGTTACATGCGAATAATATTTTCACTTTCATCTCCACTCTGAGACTTGTTCAGGAACCCATTCGAACAATACCTGATGTTTTTGCGGTTGCCATTCAAGCCAAGGTTGGATTTGCTCGTATTGTGAAATTCCTCGAGGCACCTGAGCTGCAACCTTCAAATGTCCGGAAGTGCAACATGAAGAATGTAGATAAGTCCATTGAAATTAAGTCAGCTAATTTTTCATGGGAAGAGAATTCATCGAAGTCCATACTGAGAAATATAAATTTAGAGGTTAGACCAGGCGAAAAGGTGGCTATATGTGGAGAAGTTGGCTCAGGCAAATCAAGCCTTTTGGCTGCAATTCTTGGAGAAATTCCAACTGTGCAAGGAAATATTCAAGTTTATGGCAAGATTGCCTATGTTTCTCAAACAGCTTGGATTCAGTCAGGAACTATACAAGAAAATATTCTCTTTGGCTCTTGTATGGATAGTAAGAGATACCGGGAAACACTTGAGAGATGCTCACTAGTAAAGGATCTTGAGCTGCTTCCCTATGGTGACCTTACTGAAATAGGGGAGAGAGGGGTGAATCTTAGTGGAGGTCAGAAGCAGCGGATCCAACTTGCACGCGCTCTCTATCAGGATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAGCTTATTTAATGAATATGTAATGGAAGCACTTTCAGGCAAGACAGTACTACTTGTGACCCATCAAGTTGATTTCTTGCCTGCATTTCATTTCGTTTTGTTGATGATGGATGGGGAGATCCTACAAGCAGCTCCGTATCAGCATCTATTGGATATAAGCCGTGAATTCCAGGACCTTGTCAATGCACACAAAGAAACTGCTGGTTCCGAAAGGCTTTCAGATGTCACTTCTGCTCAAAATTCTGGAATATCGTCTACAGAGATTAAGAAGAGTTATGTGGAAAAGCCATTGAAAGAAAATAAAGGTGACCAATTGATTAAACTAGAAGAGAGAGAGACAGGAGACACAGGTCTAAAGCCATACATACTGTATCTGAAACAGAACAAAGGGTTCTTGTACTTCTCAATTGCCATTTGTCTACACTTCACTTTCGTTATGAGTGAGATTGCGCAGAACTCTTGGATGGCTGCTAGTGTCGACAATCCAAATGTTAGCACATTGCAAATGATTTTGGTTTACTTAGCGATTGGATTCCCCGCTACATTCATTTTTCTGTTCAGATCTCTTGCAGTAGTTAATGGGGGTCTTGAAACGTCAAAGTCTATATTCTCACAACTACTAAACTCCCTTTTTCGTGCACCCATGTCATTCTATGATTCAACACCCTTGGGAAGGGTACTTAGTCGGGTTTCATCTGATCTGAGTATCACAGATATTGATATTCCATTCGCTTTAGTATTTGCTTGCACATCTATCATCAATGCCTATAGCAATCTTGGAGTATTGATTGTTGTTACCTGGCAAGTCCTGTTTGTCTCCATACCAATGATCTGTGTCGCGATTCAGCTACAGAAATATTACTATTCCACTGCAAAAGAGTTGATGAGGATCAATGGAACAACCAAGTCCTTTGTAGCGAACCATCTCGCCGAGTCTGTCTCAGGTGCCATTACCATAAGAGCTTTCAATGAAGAAGAGCGCTTCTCGGCAAAGAACTTTGACCTCATTGACACGAATGCTAGTCCTTATTTCCACAGTTTTTCGGCAAATGAGTGGTTAATTCAACGGTTAGAGATGATCAGCGCAGCGGTTCTTGCCTCTGCAGCACTTTGTATGGTTTTGCTTCCAACTGAAACTTTTAGCTCTGGATTTGTTGGGATGGCACTTTCTTATGGTCTATCATTAAACGTGCTCTTGATCAATACAATTCAGAACCAGTGCACTATAGCAAATTACATCATTTCTGTAGAAAGACTAGATCAATACATGCACATTCCGAGTGAAGCCCCAGAAGTAGTTGAGGGAAATCGTCCACCAGCCAACTGGCCTGTAGTAGGAAAAGTGGAGATACAAAATTTGCAGATAAGATATAGGGAAGACACACCACTTGTTCTCCGAGGGATCAGTTGTGTTTTTGAAGGAGGGCATAAAATTGGTATTGTTGGTAGGACAGGCAGTGGGAAGTCTACTCTAATCGGTGCTCTATTTCGGCTGGTTGAGCCAGCCGGAGGGAAGATCATAGTCGATGGCATTGACATCTGCACTATAGGCCTTCATGATCTGAGGTCAAGAATTGGAATAATACCTCAAGACCCTACTCTCTTTAGTGGGACTGTAAGATACAATTTGGACCCTTTATCTGAACATTCAGACCAGGAAATATGGGAGGTCCTTGGGAAGTGTCAGCTTCGAGAGCCTGTCGAGGAGAGAGAAGGCGGCTTGGACTCGTTAGTTGTGGATGATGGATCAAACTGGAGCATGGGGCAAAGGCAACTTTTCTGCCTCGGGCGCGCGCTTCTAAGGAGAAGTCGGGTATTGGTGCTTGATGAAGCAACTGCATCTATTGACAATGCAACTGATACGATCCTGCAGAAGACTATAAGGACTGAGTTTGAAGCTTGTACAGTAATTACGGTAGCTCACAGGATACCAACTGTGATGGATTGCACAATGGTGCTTTCCATTAGTGACGGAAAAATAGTGGAGTATGATGAGCCAATGCGGTTGATGAAGAAAGAAGGGTCGCTCTTTGCGCAGCTTGTCAAGGAGTACTGGTCTCATCTCCAGTCTGCAGAATCTCATATTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1477

Amino Acids

165.1

Weight (kDa)

6.53

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABCC10_N	PF24358	4 - 194	1.3e-73	ABCC10 N-terminal domain
ABC_membrane	PF00664	305 - 572	8e-24	ABC transporter transmembrane region
ABC_tran	PF00005	637 - 771	1.3e-22	ABC transporter
ABC_membrane	PF00664	912 - 1155	9.7e-24	ABC transporter transmembrane region
ABC_tran	PF00005	1245 - 1393	1.7e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1790
Acc16I	TGCGCA	3 cut(s)	785, 2790, 4374
AccB1I	GGYRCC	2 cut(s)	1795, 3284
AccI	GTMKAC	4 cut(s)	2594, 2758, 2817, 3806
AccII	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
AccIII	TCCGGA	2 cut(s)	449, 1821
AciI	CCGC	9 cut(s)	21, 240, 1319, 1742, 2251, 2877, 3428, 4056, 4342
AclWI	GGATC	9 cut(s)	2181, 2248, 2261, 2300, 2452, 3236, 3749, 4093, 4198
AcoI	YGGCCR	1 cut(s)	225
AcuI	CTGAAG	3 cut(s)	30, 959, 1078
AfaI	GTAC	9 cut(s)	126, 516, 1091, 1585, 2388, 2738, 3018, 4243, 4391
AfeI	AGCGCT	1 cut(s)	3320
AfiI	CCNNNNNNNGG	5 cut(s)	632, 904, 3012, 3674, 3848
AflIII	ACRYGT	1 cut(s)	99
AhlI	ACTAGT	1 cut(s)	2164
AjnI	CCWGG	5 cut(s)	535, 1936, 2508, 3137, 3993
AjuI	GAANNNNNNNTTGG	2 cut(s)	397, 429
AleI	CACNNNNGTG	2 cut(s)	1194, 4292
Alw21I	GWGCWC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
Alw26I	GTCTC	8 cut(s)	226, 1621, 1693, 2669, 2676, 3160, 3283, 4401
Alw44I	GTGCAC	3 cut(s)	254, 2976, 3559
AlwI	GGATC	9 cut(s)	2181, 2248, 2261, 2300, 2452, 3236, 3749, 4093, 4198
AlwNI	CAGNNNCTG	1 cut(s)	70
Ama87I	CYCGRG	2 cut(s)	1790, 4124
Aor13HI	TCCGGA	2 cut(s)	449, 1821
Aor51HI	AGCGCT	1 cut(s)	3320
AoxI	GGCC	5 cut(s)	225, 613, 1324, 3665, 3889
ApaLI	GTGCAC	3 cut(s)	254, 2976, 3559
Asp700I	GAANNNNTTC	2 cut(s)	1716, 2103
AspLEI	GCGC	9 cut(s)	786, 2270, 2791, 3321, 3425, 4131, 4133, 4135, 4375
AspS9I	GGNCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
AsuC2I	CCSGG	1 cut(s)	2141
AsuHPI	GGTGA	8 cut(s)	403, 602, 647, 1211, 1360, 2207, 2236, 2657
AsuII	TTCGAA	1 cut(s)	1720
AvaI	CYCGRG	2 cut(s)	1790, 4124
AvaII	GGWCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
BaeGI	GKGCMC	3 cut(s)	258, 2980, 3563
BamHI	GGATCC	1 cut(s)	2253
BanI	GGYRCC	2 cut(s)	1795, 3284
BbsI	GAAGAC	3 cut(s)	591, 3723, 4220
Bbv12I	GWGCWC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
BbvCI	CCTCAGC	1 cut(s)	293
BceAI	ACGGC	1 cut(s)	2484
BciT130I	CCWGG	5 cut(s)	537, 1938, 2510, 3139, 3995
BciVI	GTATCC	1 cut(s)	4260
BclI	TGATCA	3 cut(s)	664, 3417, 3537
BcnI	CCSGG	1 cut(s)	2141
BcoDI	GTCTC	8 cut(s)	226, 1621, 1693, 2669, 2676, 3160, 3283, 4401
BcuI	ACTAGT	1 cut(s)	2164
BfoI	RGCGCY	1 cut(s)	3322
BfuI	GTATCC	1 cut(s)	4260
BglII	AGATCT	1 cut(s)	2900
BmcAI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
Bme1390I	CCNGG	6 cut(s)	537, 1938, 2141, 2510, 3139, 3995
Bme18I	GGWCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
BmeT110I	CYCGRG	2 cut(s)	1790, 4124
BmgT120I	GGNCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
BmiI	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3286, 3972
BmrFI	CCNGG	6 cut(s)	537, 1938, 2141, 2510, 3139, 3995
BmsI	GCATC	7 cut(s)	393, 1216, 2147, 2272, 2314, 2491, 4187
BoxI	GACNNNNGTC	2 cut(s)	424, 2688
BpiI	GAAGAC	3 cut(s)	591, 3723, 4220
BplI	GAGNNNNNCTC	8 cut(s)	361, 393, 2144, 2176, 3263, 3295, 3308, 3340
BpmI	CTGGAG	5 cut(s)	60, 779, 845, 4114, 4388
Bpu10I	CCTNAGC	3 cut(s)	293, 1800, 1972
Bpu14I	TTCGAA	1 cut(s)	1720
BpuEI	CTTGAG	5 cut(s)	143, 1427, 2171, 2198, 3912
BpuMI	CCSGG	1 cut(s)	2141
BsaBI	GATNNNNATC	3 cut(s)	887, 2292, 3227
BsaI	GGTCTC	1 cut(s)	4401
BsaJI	CCNNGG	7 cut(s)	535, 1344, 1758, 3006, 3736, 4012, 4123
BsaWI	WCCGGW	3 cut(s)	449, 775, 1821
BsaXI	ACNNNNNCTCC	4 cut(s)	3717, 3747, 4379, 4409
Bsc4I	CCNNNNNNNGG	5 cut(s)	632, 904, 3012, 3674, 3848
Bse1I	ACTGG	6 cut(s)	905, 3556, 3668, 4097, 4397, 4405
Bse3DI	GCAATG	2 cut(s)	1566, 2837
Bse8I	GATNNNNATC	3 cut(s)	887, 2292, 3227
BseAI	TCCGGA	2 cut(s)	449, 1821
BseBI	CCWGG	5 cut(s)	537, 1938, 2510, 3139, 3995
BseDI	CCNNGG	7 cut(s)	535, 1344, 1758, 3006, 3736, 4012, 4123
BseJI	GATNNNNATC	3 cut(s)	887, 2292, 3227
BseLI	CCNNNNNNNGG	5 cut(s)	632, 904, 3012, 3674, 3848
BseMI	GCAATG	2 cut(s)	1566, 2837
BseNI	ACTGG	6 cut(s)	905, 3556, 3668, 4097, 4397, 4405
BsePI	GCGCGC	2 cut(s)	4129, 4131
BseRI	GAGGAG	3 cut(s)	608, 1553, 4058
BseSI	GKGCMC	3 cut(s)	258, 2980, 3563
BsgI	GTGCAG	2 cut(s)	1120, 3865
Bsh1236I	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
Bsh1285I	CGRYCG	1 cut(s)	1323
BshFI	GGCC	5 cut(s)	227, 615, 1326, 3667, 3891
BshNI	GGYRCC	2 cut(s)	1795, 3284
BsiEI	CGRYCG	1 cut(s)	1323
BsiHKAI	GWGCWC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
BsiHKCI	CYCGRG	2 cut(s)	1790, 4124
BsiSI	CCGG	6 cut(s)	450, 776, 1038, 1822, 2140, 3846
BslFI	GGGAC	1 cut(s)	3964
BslI	CCNNNNNNNGG	5 cut(s)	632, 904, 3012, 3674, 3848
BsmAI	GTCTC	8 cut(s)	226, 1621, 1693, 2669, 2676, 3160, 3283, 4401
BsmFI	GGGAC	1 cut(s)	3964
BsmI	GAATGC	2 cut(s)	1381, 3361
BsnI	GGCC	5 cut(s)	227, 615, 1326, 3667, 3891
Bso31I	GGTCTC	1 cut(s)	4401
BsoBI	CYCGRG	2 cut(s)	1790, 4124
Bsp119I	TTCGAA	1 cut(s)	1720
Bsp1286I	GDGCHC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
Bsp13I	TCCGGA	2 cut(s)	449, 1821
Bsp1407I	TGTACA	1 cut(s)	4241
Bsp68I	TCGCGA	1 cut(s)	3179
BspACI	CCGC	9 cut(s)	21, 240, 1319, 1742, 2251, 2877, 3428, 4056, 4342
BspANI	GGCC	5 cut(s)	227, 615, 1326, 3667, 3891
BspEI	TCCGGA	2 cut(s)	449, 1821
BspFNI	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
BspHI	TCATGA	1 cut(s)	3895
BspLI	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3286, 3972
BspMAI	CTGCAG	3 cut(s)	3445, 4212, 4414
BspPI	GGATC	9 cut(s)	2181, 2248, 2261, 2300, 2452, 3236, 3749, 4093, 4198
BspQI	GCTCTTC	1 cut(s)	3309
BspT104I	TTCGAA	1 cut(s)	1720
BspT107I	GGYRCC	2 cut(s)	1795, 3284
BspTNI	GGTCTC	1 cut(s)	4401
BsrDI	GCAATG	2 cut(s)	1566, 2837
BsrGI	TGTACA	1 cut(s)	4241
BsrI	ACTGG	6 cut(s)	905, 3556, 3668, 4097, 4397, 4405
BssECI	CCNNGG	7 cut(s)	535, 1344, 1758, 3006, 3736, 4012, 4123
BssHII	GCGCGC	2 cut(s)	4129, 4131
BssT1I	CCWWGG	4 cut(s)	1344, 1758, 3006, 4012
Bst2UI	CCWGG	5 cut(s)	537, 1938, 2510, 3139, 3995
Bst6I	CTCTTC	5 cut(s)	279, 1881, 2603, 2661, 3309
BstAPI	GCANNNNNTGC	1 cut(s)	2333
BstAUI	TGTACA	1 cut(s)	4241
BstBI	TTCGAA	1 cut(s)	1720
BstC8I	GCNNGC	9 cut(s)	839, 1103, 1639, 2266, 2421, 3085, 3843, 4131, 4133
BstEII	GGTNACC	2 cut(s)	2195, 2645
BstENI	CCTNNNNNAGG	2 cut(s)	3010, 3672
BstFNI	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
BstH2I	RGCGCY	1 cut(s)	3322
BstHHI	GCGC	9 cut(s)	786, 2270, 2791, 3321, 3425, 4131, 4133, 4135, 4375
BstMAI	GTCTC	8 cut(s)	226, 1621, 1693, 2669, 2676, 3160, 3283, 4401
BstMCI	CGRYCG	1 cut(s)	1323
BstNI	CCWGG	5 cut(s)	537, 1938, 2510, 3139, 3995
BstNSI	RCATGY	3 cut(s)	1641, 1667, 3610
BstPAI	GACNNNNGTC	2 cut(s)	424, 2688
BstPI	GGTNACC	2 cut(s)	2195, 2645
BstSCI	CCNGG	6 cut(s)	535, 1936, 2139, 2508, 3137, 3993
BstSLI	GKGCMC	3 cut(s)	258, 2980, 3563
BstUI	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
BstV2I	GAAGAC	3 cut(s)	591, 3723, 4220
BstX2I	RGATCY	4 cut(s)	2173, 2253, 2457, 2900
BstXI	CCANNNNNNTGG	1 cut(s)	3663
BstYI	RGATCY	4 cut(s)	2173, 2253, 2457, 2900
BsuI	GTATCC	1 cut(s)	4260
BsuRI	GGCC	5 cut(s)	227, 615, 1326, 3667, 3891
BtsI	GCAGTG	3 cut(s)	1091, 3207, 3802
BtuMI	TCGCGA	1 cut(s)	3179
Cac8I	GCNNGC	9 cut(s)	839, 1103, 1639, 2266, 2421, 3085, 3843, 4131, 4133
CaiI	CAGNNNCTG	1 cut(s)	70
CciI	TCATGA	1 cut(s)	3895
CfoI	GCGC	9 cut(s)	786, 2270, 2791, 3321, 3425, 4131, 4133, 4135, 4375
Cfr13I	GGNCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
CseI	GACGC	1 cut(s)	1270
Csp6I	GTAC	9 cut(s)	125, 515, 1090, 1584, 2387, 2737, 3017, 4242, 4390
CspCI	CAANNNNNGTGG	2 cut(s)	1067, 1102
CviQI	GTAC	9 cut(s)	125, 515, 1090, 1584, 2387, 2737, 3017, 4242, 4390
DraI	TTTAAA	1 cut(s)	630
EaeI	YGGCCR	1 cut(s)	225
Eam1104I	CTCTTC	5 cut(s)	279, 1881, 2603, 2661, 3309
EarI	CTCTTC	5 cut(s)	279, 1881, 2603, 2661, 3309
Eco130I	CCWWGG	4 cut(s)	1344, 1758, 3006, 4012
Eco147I	AGGCCT	1 cut(s)	3891
Eco31I	GGTCTC	1 cut(s)	4401
Eco32I	GATATC	1 cut(s)	523
Eco47I	GGWCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
Eco47III	AGCGCT	1 cut(s)	3320
Eco57I	CTGAAG	3 cut(s)	30, 959, 1078
Eco88I	CYCGRG	2 cut(s)	1790, 4124
Eco91I	GGTNACC	2 cut(s)	2195, 2645
EcoNI	CCTNNNNNAGG	2 cut(s)	3010, 3672
EcoO109I	RGGNCCY	2 cut(s)	2512, 4009
EcoO65I	GGTNACC	2 cut(s)	2195, 2645
EcoRI	GAATTC	3 cut(s)	1244, 1891, 2504
EcoRII	CCWGG	5 cut(s)	535, 1936, 2508, 3137, 3993
EcoRV	GATATC	1 cut(s)	523
EcoT14I	CCWWGG	4 cut(s)	1344, 1758, 3006, 4012
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	4 cut(s)	1344, 1758, 3006, 4012
FalI	AAGNNNNNCTT	2 cut(s)	397, 429
FaqI	GGGAC	1 cut(s)	3964
FauI	CCCGC	1 cut(s)	2884
FbaI	TGATCA	3 cut(s)	664, 3417, 3537
FblI	GTMKAC	4 cut(s)	2594, 2758, 2817, 3806
FspI	TGCGCA	3 cut(s)	785, 2790, 4374
GlaI	GCGC	9 cut(s)	785, 2269, 2790, 3320, 3424, 4130, 4132, 4134, 4374
GsuI	CTGGAG	5 cut(s)	60, 779, 845, 4114, 4388
HaeII	RGCGCY	1 cut(s)	3322
HaeIII	GGCC	5 cut(s)	227, 615, 1326, 3667, 3891
HapII	CCGG	6 cut(s)	450, 776, 1038, 1822, 2140, 3846
HgaI	GACGC	1 cut(s)	1270
HhaI	GCGC	9 cut(s)	786, 2270, 2791, 3321, 3425, 4131, 4133, 4135, 4375
Hin6I	GCGC	9 cut(s)	784, 2268, 2789, 3319, 3423, 4129, 4131, 4133, 4373
HinP1I	GCGC	9 cut(s)	784, 2268, 2789, 3319, 3423, 4129, 4131, 4133, 4373
HincII	GTYRAC	2 cut(s)	1185, 2818
HindII	GTYRAC	2 cut(s)	1185, 2818
HindIII	AAGCTT	3 cut(s)	1415, 2341, 4236
HpaII	CCGG	6 cut(s)	450, 776, 1038, 1822, 2140, 3846
HphI	GGTGA	8 cut(s)	403, 602, 647, 1211, 1360, 2207, 2236, 2657
HpyCH4IV	ACGT	2 cut(s)	2933, 3528
HpySE526I	ACGT	2 cut(s)	2933, 3528
HspAI	GCGC	9 cut(s)	784, 2268, 2789, 3319, 3423, 4129, 4131, 4133, 4373
Kpn2I	TCCGGA	2 cut(s)	449, 1821
Ksp22I	TGATCA	3 cut(s)	664, 3417, 3537
LguI	GCTCTTC	1 cut(s)	3309
LmnI	GCTCC	8 cut(s)	41, 539, 826, 1040, 1384, 1540, 2476, 4095
LweI	GCATC	7 cut(s)	393, 1216, 2147, 2272, 2314, 2491, 4187
MaeII	ACGT	2 cut(s)	2933, 3528
MfeI	CAATTG	3 cut(s)	1157, 2651, 2745
MflI	RGATCY	4 cut(s)	2173, 2253, 2457, 2900
MhlI	GDGCHC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
MluI	ACGCGT	1 cut(s)	99
MlyI	GAGTC	5 cut(s)	279, 647, 1434, 3281, 4058
MmeI	TCCRAC	4 cut(s)	1744, 2039, 2281, 3491
Mph1103I	ATGCAT	1 cut(s)	1495
MroI	TCCGGA	2 cut(s)	449, 1821
MroXI	GAANNNNTTC	2 cut(s)	1716, 2103
MslI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 3164, 4292
MspA1I	CMGCKG	2 cut(s)	2251, 3428
MspI	CCGG	6 cut(s)	450, 776, 1038, 1822, 2140, 3846
MspR9I	CCNGG	6 cut(s)	537, 1938, 2141, 2510, 3139, 3995
MunI	CAATTG	3 cut(s)	1157, 2651, 2745
Mva1269I	GAATGC	2 cut(s)	1381, 3361
MvaI	CCWGG	5 cut(s)	537, 1938, 2510, 3139, 3995
MvnI	CGCG	6 cut(s)	23, 101, 2268, 3179, 4131, 4133
NciI	CCSGG	1 cut(s)	2141
NlaIV	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3286, 3972
NmeAIII	GCCGAG	3 cut(s)	203, 3295, 3305
NmuCI	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 2645, 4307
NruI	TCGCGA	1 cut(s)	3179
NsbI	TGCGCA	3 cut(s)	785, 2790, 4374
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	3 cut(s)	1641, 1667, 3610
NspV	TTCGAA	1 cut(s)	1720
OliI	CACNNNNGTG	2 cut(s)	1194, 4292
PaeI	GCATGC	1 cut(s)	1641
PaeR7I	CTCGAG	1 cut(s)	1790
PagI	TCATGA	1 cut(s)	3895
PauI	GCGCGC	2 cut(s)	4129, 4131
PceI	AGGCCT	1 cut(s)	3891
PciSI	GCTCTTC	1 cut(s)	3309
PctI	GAATGC	2 cut(s)	1381, 3361
PdmI	GAANNNNTTC	2 cut(s)	1716, 2103
PfeI	GAWTC	9 cut(s)	35, 883, 1067, 2077, 2227, 2871, 2996, 3181, 4415
PflFI	GACNNNGTC	1 cut(s)	2516
PfoI	TCCNGGA	1 cut(s)	2508
PleI	GAGTC	5 cut(s)	278, 646, 1434, 3280, 4058
PpsI	GAGTC	5 cut(s)	278, 646, 1434, 3280, 4058
PpuMI	RGGWCCY	2 cut(s)	2512, 4009
PshAI	GACNNNNGTC	2 cut(s)	424, 2688
Psp5II	RGGWCCY	2 cut(s)	2512, 4009
Psp6I	CCWGG	5 cut(s)	535, 1936, 2508, 3137, 3993
PspEI	GGTNACC	2 cut(s)	2195, 2645
PspGI	CCWGG	5 cut(s)	535, 1936, 2508, 3137, 3993
PspN4I	GGNNCC	7 cut(s)	1259, 1713, 1797, 2255, 2545, 3286, 3972
PspPI	GGNCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
PspPPI	RGGWCCY	2 cut(s)	2512, 4009
PspXI	VCTCGAGB	1 cut(s)	1790
PstI	CTGCAG	3 cut(s)	3445, 4212, 4414
PstNI	CAGNNNCTG	1 cut(s)	70
PsuI	RGATCY	4 cut(s)	2173, 2253, 2457, 2900
PsyI	GACNNNGTC	1 cut(s)	2516
PteI	GCGCGC	2 cut(s)	4129, 4131
RruI	TCGCGA	1 cut(s)	3179
RsaI	GTAC	9 cut(s)	126, 516, 1091, 1585, 2388, 2738, 3018, 4243, 4391
RsaNI	GTAC	9 cut(s)	125, 515, 1090, 1584, 2387, 2737, 3017, 4242, 4390
RseI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 3164, 4292
SalI	GTCGAC	1 cut(s)	2816
SapI	GCTCTTC	1 cut(s)	3309
Sau96I	GGNCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
ScaI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
SchI	GAGTC	5 cut(s)	279, 647, 1434, 3281, 4058
ScrFI	CCNGG	6 cut(s)	537, 1938, 2141, 2510, 3139, 3995
SduI	GDGCHC	8 cut(s)	141, 258, 1045, 1545, 2980, 3534, 3563, 3823
SfaNI	GCATC	7 cut(s)	393, 1216, 2147, 2272, 2314, 2491, 4187
Sfr274I	CTCGAG	1 cut(s)	1790
SfuI	TTCGAA	1 cut(s)	1720
SinI	GGWCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
SlaI	CTCGAG	1 cut(s)	1790
SmiMI	CAYNNNNRTG	5 cut(s)	389, 715, 1194, 3164, 4292
SmlI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3927
SmoI	CTYRAG	6 cut(s)	158, 1442, 1790, 2150, 2177, 3927
SpeI	ACTAGT	1 cut(s)	2164
SphI	GCATGC	1 cut(s)	1641
SseBI	AGGCCT	1 cut(s)	3891
SsiI	CCGC	9 cut(s)	21, 240, 1319, 1742, 2251, 2877, 3428, 4056, 4342
SspI	AATATT	5 cut(s)	1654, 1675, 2032, 2104, 3197
StuI	AGGCCT	1 cut(s)	3891
StyD4I	CCNGG	6 cut(s)	535, 1936, 2139, 2508, 3137, 3993
StyI	CCWWGG	4 cut(s)	1344, 1758, 3006, 4012
TaiI	ACGT	2 cut(s)	2936, 3531
TatI	WGTACW	7 cut(s)	124, 514, 1583, 2386, 2736, 4241, 4389
TauI	GCSGC	1 cut(s)	4059
TfiI	GAWTC	9 cut(s)	35, 883, 1067, 2077, 2227, 2871, 2996, 3181, 4415
TseFI	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 2645, 4307
Tsp45I	GTSAC	7 cut(s)	605, 1074, 2195, 2395, 2563, 2645, 4307
TspGWI	ACGGA	5 cut(s)	1304, 1546, 1647, 2463, 4326
Tth111I	GACNNNGTC	1 cut(s)	2516
VneI	GTGCAC	3 cut(s)	254, 2976, 3559
VpaK11BI	GGWCC	6 cut(s)	18, 854, 962, 2512, 3970, 4009
XagI	CCTNNNNNAGG	2 cut(s)	3010, 3672
XceI	RCATGY	3 cut(s)	1641, 1667, 3610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3660
XhoI	CTCGAG	1 cut(s)	1790
XmiI	GTMKAC	4 cut(s)	2594, 2758, 2817, 3806
XmnI	GAANNNNTTC	2 cut(s)	1716, 2103
ZrmI	AGTACT	4 cut(s)	516, 1585, 2388, 4391
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.