Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

63930168 .. 63937104

Gene Structure 6937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG426300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGATAGTGAAAGATACCGAGAAACGCTTGAGAGATGTTCGCTTGTAAAGGACCTTGAGTTACTGCCCTATGGTGACCTCACTGAAATAGGGGAGAGAGGGGTCAATCTAAGTGGAGGTCAGAAGCAGCGGATTCAACTTGCTCGGGCTCTCTATCAGAATGCTGACATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCTACTAACCTATTTAATGAATATGTTATGGAAGCACTTTCAGGGAAGACAGTCTTACTTGTGACCCATCAAGTTGATTTCCTGCCTGCATTTGATTCAGTCTTGTTGATGTTGGATGGGGAAATCCTTGAAGCAGCTCCTTATTATCAGTTATTGGCCTCGAGCCAAGAGTTTCAGGACCTTGTCAATGCACACAAAGAAACTGCTGGTTCTGAAAGGCTTGCAGATGTCCCTTCTGTCCAAAATTCTGGAACATCATCCAGAGAGATTAAGAAGGCTTATGTAGAGAAGAAATTGAAAGGAAATAAAGGTGACCAGTTGATTAAGATAGAAGAGAGAGAAATAGGAGACACTGGTTTGAGGCCATACAAACAGTATCTGAGACAGAACAAAGGGGTCTTGTACTTCTCAGCCGCTGTTCTTTTACACCTGACATTTGTTATTAGTCAGATAGCACAGAACTCTTGGATGGCTGCTAATGTTGATAATCCCAATGTTAGCTCATTGCAATTGATCGTGGTTTACCTGTCGATTGGATTTTCTGCAACATTTATTTTGCTGTTCAGATCTCTGTTAACAGTTGTTTTGGGTCTTGAGGCATCAAAGTCTTTATTTTCTCAGCTACTAAACTCTCTATTTCGTGCACCCATGTCTTTCTATGACTCAACGCCTCTGGGAAGGATACTAAGTCGGGTTTCATCTGATCTAAGTATCGTAGATCTTGATATTCCATTCAGCCTGGTCTTTGCTTGTGGAGCTACCATAAATGCTTACTCCAATCTTGGAGTACTAGCTGCTGTTACATGGCAAGTCCTGTTTGTTTCCATACCAATGGTTTTTCTGGCAATTCAGCTACAGAAATATTACTTTTCCACTGCAAAGGAGTTGATGAGGATCAATGGAACAACCAAGTCTTTTGTAGCAAATCATCTAGCAGAGTCTGTATCAGGCGCCATTACAATAAGAGCTTTCAATGAAGAAGAGCGCTTCTTGGCAAAGAATTTTCACCTCATTGACACAAATGCTAGCCCATTTTTTCATAATTTTTCAGCAAATGAGTGGTTGATTCAACGGTTAGAAATAATTTGCGCAGCAGTTCTCGCCTCTGCAGCACTCTGTATGGTTTTGCTTCCAACTGGAACTTTTAGCTCTGGGTTTATTGGAATGGCGCTTTCTTATGGTCTTTCATTAAACGTGTCATTGATCTTTTCAATTCAAAACCAGTGCACTATAGCAAATTACATAATTTGTGTTGAAAGACTAAATCAATACACACATGTACCAAGCGAAGCCCCTGAAGTTATAGAGGGAAACCGTCCACCTCCCAACTGGCCTGTTGTAGGAAAAGTGGAAATACAAAATTTGCAGATAAGATATAGGGATGACACACCACTTGTTCTTCGAGGGATCAGTTGTGTTTTTGAAGGAGGACATAAGATTGGTATTGTTGGCCGGACAGGCAGTGGGAAGTCTACACTAATCGGTGCTTTATTTCGTCTGGTGGAGCCAGCTGGAGGGAAGATTATAGTCGATGGCATTGACATCTCTACTATAGGACTTCATGATCTGAGGTCAAGATTTGGAATAATACCTCAAGACCCTACTCTCTTTAATGGCACTGTCAGATACAATTTGGACCCCTTATCTCAACATTCAGACCAGAAAATATGGGAGGTTCTTGGGAAGTGTCAGCTGCGAGAGGCTGTTGAGGAGAAAGAAAAAGGCTTAGACTCGTTAGTTGTGGATGATGGATCGAACTGGAGCATGGGGCAAAGGCAGTTGTTCTGTTTGGGCCGTGCTCTTTTGAGGAGAAGTCGGGTATTGGTGCTTGATGAAGCAACAGCTTCCATCGACAATGCAACTGATATGATTTTACAGAAGACTATACGGACTGAATTTGCAGATTGTACAGTTATTACAGTAGCTCACAGGATACCGACTGTGATGGATTGCACAATGGTCCTTGCCATTAGTGACGGGAAAATAGTGGAGTATGACGAGCCAATGAACCTAATGAAAAGAGAAGGCTCACTATTCGGGCAGCTTGTCAAGGAATACTGGTCTCATCTCCAGTCTGCAGAATCACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

767

Amino Acids

85.09

Weight (kDa)

5.53

Isoelectric Point (pI)

32.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	28 - 64	9.9e-08	ABC transporter
ABC_membrane	PF00664	205 - 464	6.8e-26	ABC transporter transmembrane region
ABC_tran	PF00005	538 - 686	3e-25	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1303
AccB1I	GGYRCC	1 cut(s)	1163
AccI	GTMKAC	1 cut(s)	1685
AciI	CCGC	2 cut(s)	130, 627
AclWI	GGATC	4 cut(s)	179, 1115, 1628, 1972
AcoI	YGGCCR	1 cut(s)	1663
AcsI	RAATTY	4 cut(s)	457, 1213, 1573, 2108
AcuI	CTGAAG	1 cut(s)	1530
AcyI	GRCGYC	1 cut(s)	1164
AfaI	GTAC	4 cut(s)	617, 1002, 1494, 2122
AfeI	AGCGCT	1 cut(s)	1199
AfiI	CCNNNNNNNGG	2 cut(s)	1553, 1727
AflIII	ACRYGT	2 cut(s)	1407, 1489
AgsI	TTSAA	9 cut(s)	137, 344, 511, 1186, 1283, 1425, 1430, 1469, 1637
AjnI	CCWGG	1 cut(s)	951
Alw21I	GWGCWC	3 cut(s)	859, 1442, 2014
Alw26I	GTCTC	3 cut(s)	555, 589, 2280
Alw44I	GTGCAC	2 cut(s)	855, 1438
AlwI	GGATC	4 cut(s)	179, 1115, 1628, 1972
AlwNI	CAGNNNCTG	3 cut(s)	592, 629, 1154
Ama87I	CYCGRG	2 cut(s)	144, 373
Aor51HI	AGCGCT	1 cut(s)	1199
AoxI	GGCC	5 cut(s)	369, 575, 1544, 1663, 2005
ApaLI	GTGCAC	2 cut(s)	855, 1438
ApeKI	GCWGC	8 cut(s)	127, 347, 686, 1007, 1304, 1322, 1906, 2254
ApoI	RAATTY	4 cut(s)	457, 1213, 1573, 2108
AspLEI	GCGC	4 cut(s)	1166, 1200, 1304, 1384
AspS9I	GGNCC	5 cut(s)	52, 391, 1849, 2005, 2173
AsuHPI	GGTGA	3 cut(s)	86, 536, 1211
AsuNHI	GCTAGC	1 cut(s)	1238
AvaI	CYCGRG	2 cut(s)	144, 373
AvaII	GGWCC	4 cut(s)	52, 391, 1849, 2173
BaeGI	GKGCMC	2 cut(s)	859, 1442
BaeI	ACNNNNGTAYC	2 cut(s)	1476, 1509
BanI	GGYRCC	1 cut(s)	1163
BanII	GRGCYC	1 cut(s)	151
BbsI	GAAGAC	2 cut(s)	266, 2099
Bbv12I	GWGCWC	3 cut(s)	859, 1442, 2014
BbvI	GCAGC	8 cut(s)	139, 359, 673, 994, 1316, 1334, 1893, 2266
BccI	CCATC	7 cut(s)	288, 323, 676, 1739, 1955, 2069, 2152
BceAI	ACGGC	1 cut(s)	1992
BciT130I	CCWGG	1 cut(s)	953
BciVI	GTATCC	2 cut(s)	888, 2139
BcoDI	GTCTC	3 cut(s)	555, 589, 2280
BfaI	CTAG	3 cut(s)	1004, 1145, 1239
BfmI	CTRYAG	5 cut(s)	1067, 1320, 1443, 1764, 2289
BfoI	RGCGCY	3 cut(s)	1167, 1201, 1385
BfuI	GTATCC	2 cut(s)	888, 2139
BglI	GCCNNNNNGGC	1 cut(s)	1671
BglII	AGATCT	2 cut(s)	779, 931
BisI	GCNGC	9 cut(s)	128, 348, 627, 687, 1008, 1305, 1323, 1907, 2255
BlsI	GCNGC	9 cut(s)	129, 349, 628, 688, 1009, 1306, 1324, 1908, 2256
BmcAI	AGTACT	1 cut(s)	1002
Bme1390I	CCNGG	1 cut(s)	953
Bme18I	GGWCC	4 cut(s)	52, 391, 1849, 2173
BmeT110I	CYCGRG	2 cut(s)	144, 373
BmgT120I	GGNCC	5 cut(s)	52, 391, 1849, 2005, 2173
BmiI	GGNNCC	3 cut(s)	1165, 1719, 1851
BmrFI	CCNGG	1 cut(s)	953
BmsI	GCATC	2 cut(s)	193, 821
BmtI	GCTAGC	1 cut(s)	1242
BpiI	GAAGAC	2 cut(s)	266, 2099
BpmI	CTGGAG	3 cut(s)	1746, 1993, 2267
BpuEI	CTTGAG	4 cut(s)	50, 77, 827, 1791
BsaBI	GATNNNNATC	1 cut(s)	1106
BsaHI	GRCGYC	1 cut(s)	1164
BsaI	GGTCTC	1 cut(s)	2280
Bsc4I	CCNNNNNNNGG	2 cut(s)	1553, 1727
Bse1I	ACTGG	8 cut(s)	529, 571, 1354, 1435, 1547, 1976, 2276, 2284
Bse3DI	GCAATG	1 cut(s)	716
Bse8I	GATNNNNATC	1 cut(s)	1106
BseBI	CCWGG	1 cut(s)	953
BseGI	GGATG	6 cut(s)	187, 334, 470, 687, 1600, 1963
BseJI	GATNNNNATC	1 cut(s)	1106
BseLI	CCNNNNNNNGG	2 cut(s)	1553, 1727
BseMI	GCAATG	1 cut(s)	716
BseMII	CTCAG	4 cut(s)	584, 636, 845, 1772
BseNI	ACTGG	8 cut(s)	529, 571, 1354, 1435, 1547, 1976, 2276, 2284
BseRI	GAGGAG	2 cut(s)	1937, 2035
BseSI	GKGCMC	2 cut(s)	859, 1442
BseXI	GCAGC	8 cut(s)	139, 359, 673, 994, 1316, 1334, 1893, 2266
BshFI	GGCC	5 cut(s)	371, 577, 1546, 1665, 2007
BshNI	GGYRCC	1 cut(s)	1163
BsiHKAI	GWGCWC	3 cut(s)	859, 1442, 2014
BsiHKCI	CYCGRG	2 cut(s)	144, 373
BsiSI	CCGG	1 cut(s)	1666
BslFI	GGGAC	1 cut(s)	428
BslI	CCNNNNNNNGG	2 cut(s)	1553, 1727
BsmAI	GTCTC	3 cut(s)	555, 589, 2280
BsmFI	GGGAC	1 cut(s)	428
BsmI	GAATGC	1 cut(s)	166
BsnI	GGCC	5 cut(s)	371, 577, 1546, 1665, 2007
Bso31I	GGTCTC	1 cut(s)	2280
BsoBI	CYCGRG	2 cut(s)	144, 373
Bsp1286I	GDGCHC	4 cut(s)	151, 859, 1442, 2014
Bsp1407I	TGTACA	1 cut(s)	2120
BspACI	CCGC	2 cut(s)	130, 627
BspANI	GGCC	5 cut(s)	371, 577, 1546, 1665, 2007
BspCNI	CTCAG	4 cut(s)	585, 635, 844, 1773
BspHI	TCATGA	1 cut(s)	1774
BspLI	GGNNCC	3 cut(s)	1165, 1719, 1851
BspMAI	CTGCAG	2 cut(s)	1324, 2293
BspOI	GCTAGC	1 cut(s)	1242
BspPI	GGATC	4 cut(s)	179, 1115, 1628, 1972
BspQI	GCTCTTC	1 cut(s)	1188
BspT107I	GGYRCC	1 cut(s)	1163
BspTNI	GGTCTC	1 cut(s)	2280
BsrDI	GCAATG	1 cut(s)	716
BsrGI	TGTACA	1 cut(s)	2120
BsrI	ACTGG	8 cut(s)	529, 571, 1354, 1435, 1547, 1976, 2276, 2284
BssNI	GRCGYC	1 cut(s)	1164
Bst2UI	CCWGG	1 cut(s)	953
Bst4CI	ACNGT	9 cut(s)	265, 588, 793, 1287, 1529, 1834, 2125, 2134, 2155
Bst6I	CTCTTC	2 cut(s)	540, 1188
BstACI	GRCGYC	1 cut(s)	1164
BstAPI	GCANNNNNTGC	1 cut(s)	212
BstAUI	TGTACA	1 cut(s)	2120
BstC8I	GCNNGC	4 cut(s)	300, 435, 1240, 1722
BstDEI	CTNAG	8 cut(s)	110, 593, 622, 831, 899, 920, 1781, 1939
BstEII	GGTNACC	2 cut(s)	74, 524
BstENI	CCTNNNNNAGG	1 cut(s)	1551
BstF5I	GGATG	6 cut(s)	187, 334, 470, 687, 1600, 1963
BstH2I	RGCGCY	3 cut(s)	1167, 1201, 1385
BstHHI	GCGC	4 cut(s)	1166, 1200, 1304, 1384
BstMAI	GTCTC	3 cut(s)	555, 589, 2280
BstMWI	GCNNNNNNNGC	6 cut(s)	203, 212, 968, 1313, 1322, 1671
BstNI	CCWGG	1 cut(s)	953
BstNSI	RCATGY	1 cut(s)	1493
BstPI	GGTNACC	2 cut(s)	74, 524
BstSCI	CCNGG	1 cut(s)	951
BstSFI	CTRYAG	5 cut(s)	1067, 1320, 1443, 1764, 2289
BstSLI	GKGCMC	2 cut(s)	859, 1442
BstV1I	GCAGC	8 cut(s)	139, 359, 673, 994, 1316, 1334, 1893, 2266
BstV2I	GAAGAC	2 cut(s)	266, 2099
BstX2I	RGATCY	2 cut(s)	779, 931
BstXI	CCANNNNNNTGG	2 cut(s)	461, 1045
BstYI	RGATCY	2 cut(s)	779, 931
BsuI	GTATCC	2 cut(s)	888, 2139
BsuRI	GGCC	5 cut(s)	371, 577, 1546, 1665, 2007
BtsCI	GGATG	6 cut(s)	187, 334, 470, 687, 1600, 1963
BtsI	GCAGTG	2 cut(s)	1086, 1681
BtsIMutI	CAGTG	6 cut(s)	81, 564, 1086, 1442, 1681, 1830
Cac8I	GCNNGC	4 cut(s)	300, 435, 1240, 1722
CaiI	CAGNNNCTG	3 cut(s)	592, 629, 1154
CciI	TCATGA	1 cut(s)	1774
CfoI	GCGC	4 cut(s)	1166, 1200, 1304, 1384
Cfr13I	GGNCC	5 cut(s)	52, 391, 1849, 2005, 2173
Csp6I	GTAC	4 cut(s)	616, 1001, 1493, 2121
CspCI	CAANNNNNGTGG	2 cut(s)	94, 129
CviAII	CATG	5 cut(s)	862, 1017, 1490, 1775, 1978
CviQI	GTAC	4 cut(s)	616, 1001, 1493, 2121
DdeI	CTNAG	8 cut(s)	110, 593, 622, 831, 899, 920, 1781, 1939
DinI	GGCGCC	1 cut(s)	1165
EaeI	YGGCCR	1 cut(s)	1663
Eam1104I	CTCTTC	2 cut(s)	540, 1188
EarI	CTCTTC	2 cut(s)	540, 1188
Eco24I	GRGCYC	1 cut(s)	151
Eco31I	GGTCTC	1 cut(s)	2280
Eco47I	GGWCC	4 cut(s)	52, 391, 1849, 2173
Eco47III	AGCGCT	1 cut(s)	1199
Eco57I	CTGAAG	1 cut(s)	1530
Eco88I	CYCGRG	2 cut(s)	144, 373
Eco91I	GGTNACC	2 cut(s)	74, 524
EcoNI	CCTNNNNNAGG	1 cut(s)	1551
EcoO109I	RGGNCCY	2 cut(s)	52, 391
EcoO65I	GGTNACC	2 cut(s)	74, 524
EcoRII	CCWGG	1 cut(s)	951
EcoT38I	GRGCYC	1 cut(s)	151
EgeI	GGCGCC	1 cut(s)	1165
EheI	GGCGCC	1 cut(s)	1165
FaeI	CATG	5 cut(s)	865, 1020, 1493, 1778, 1981
FalI	AAGNNNNNCTT	2 cut(s)	251, 283
FaqI	GGGAC	1 cut(s)	428
FatI	CATG	5 cut(s)	861, 1016, 1489, 1774, 1977
FblI	GTMKAC	1 cut(s)	1685
Fnu4HI	GCNGC	9 cut(s)	128, 348, 627, 687, 1008, 1305, 1323, 1907, 2255
FokI	GGATG	6 cut(s)	194, 341, 457, 694, 1607, 1970
FriOI	GRGCYC	1 cut(s)	151
Fsp4HI	GCNGC	9 cut(s)	128, 348, 627, 687, 1008, 1305, 1323, 1907, 2255
FspBI	CTAG	3 cut(s)	1004, 1145, 1239
FspI	TGCGCA	1 cut(s)	1303
GlaI	GCGC	4 cut(s)	1165, 1199, 1303, 1383
GluI	GCNGC	9 cut(s)	128, 348, 627, 687, 1008, 1305, 1323, 1907, 2255
GsuI	CTGGAG	3 cut(s)	1746, 1993, 2267
HaeII	RGCGCY	3 cut(s)	1167, 1201, 1385
HaeIII	GGCC	5 cut(s)	371, 577, 1546, 1665, 2007
HapII	CCGG	1 cut(s)	1666
HhaI	GCGC	4 cut(s)	1166, 1200, 1304, 1384
Hin1I	GRCGYC	1 cut(s)	1164
Hin1II	CATG	5 cut(s)	865, 1020, 1493, 1778, 1981
Hin6I	GCGC	4 cut(s)	1164, 1198, 1302, 1382
HinP1I	GCGC	4 cut(s)	1164, 1198, 1302, 1382
HincII	GTYRAC	1 cut(s)	789
HindII	GTYRAC	1 cut(s)	789
HinfI	GANTC	7 cut(s)	133, 308, 875, 1151, 1279, 1943, 2294
HpaI	GTTAAC	1 cut(s)	789
HpaII	CCGG	1 cut(s)	1666
HphI	GGTGA	3 cut(s)	86, 536, 1211
Hpy166II	GTNNAC	6 cut(s)	736, 789, 857, 1440, 1532, 1686
Hpy188III	TCNNGA	8 cut(s)	389, 462, 474, 806, 935, 1775, 1788, 1808
Hpy8I	GTNNAC	6 cut(s)	736, 789, 857, 1440, 1532, 1686
HpyAV	CCTTC	5 cut(s)	456, 481, 885, 1631, 2231
HpyCH4III	ACNGT	9 cut(s)	265, 588, 793, 1287, 1529, 1834, 2125, 2134, 2155
HpyCH4IV	ACGT	1 cut(s)	1407
HpyF10VI	GCNNNNNNNGC	6 cut(s)	203, 212, 968, 1313, 1322, 1671
HpyF3I	CTNAG	8 cut(s)	110, 593, 622, 831, 899, 920, 1781, 1939
HpySE526I	ACGT	1 cut(s)	1407
Hsp92I	GRCGYC	1 cut(s)	1164
Hsp92II	CATG	5 cut(s)	865, 1020, 1493, 1778, 1981
HspAI	GCGC	4 cut(s)	1164, 1198, 1302, 1382
KasI	GGCGCC	1 cut(s)	1163
KspAI	GTTAAC	1 cut(s)	789
LguI	GCTCTTC	1 cut(s)	1188
LmnI	GCTCC	4 cut(s)	355, 968, 1717, 1974
Lsp1109I	GCAGC	8 cut(s)	139, 359, 673, 994, 1316, 1334, 1893, 2266
LweI	GCATC	2 cut(s)	193, 821
MaeI	CTAG	3 cut(s)	1004, 1145, 1239
MaeII	ACGT	1 cut(s)	1407
MaeIII	GTNAC	6 cut(s)	60, 74, 274, 524, 1012, 2186
MboII	GAAGA	8 cut(s)	271, 514, 557, 1202, 1205, 1604, 1744, 2104
MfeI	CAATTG	1 cut(s)	722
MflI	RGATCY	2 cut(s)	779, 931
MhlI	GDGCHC	4 cut(s)	151, 859, 1442, 2014
Mly113I	GGCGCC	1 cut(s)	1164
MlyI	GAGTC	3 cut(s)	869, 1160, 1937
MmeI	TCCRAC	2 cut(s)	306, 1370
MseI	TTAA	6 cut(s)	228, 483, 537, 788, 1403, 1824
MslI	CAYNNNNRTG	1 cut(s)	1043
MspA1I	CMGCKG	4 cut(s)	130, 629, 1724, 1906
MspI	CCGG	1 cut(s)	1666
MspR9I	CCNGG	1 cut(s)	953
MunI	CAATTG	1 cut(s)	722
Mva1269I	GAATGC	1 cut(s)	166
MvaI	CCWGG	1 cut(s)	953
MwoI	GCNNNNNNNGC	6 cut(s)	203, 212, 968, 1313, 1322, 1671
NarI	GGCGCC	1 cut(s)	1164
NheI	GCTAGC	1 cut(s)	1238
NlaIII	CATG	5 cut(s)	865, 1020, 1493, 1778, 1981
NlaIV	GGNNCC	3 cut(s)	1165, 1719, 1851
NmuCI	GTSAC	4 cut(s)	74, 274, 524, 2186
NsbI	TGCGCA	1 cut(s)	1303
NspI	RCATGY	1 cut(s)	1493
PaeR7I	CTCGAG	1 cut(s)	373
PagI	TCATGA	1 cut(s)	1774
PciI	ACATGT	1 cut(s)	1489
PciSI	GCTCTTC	1 cut(s)	1188
PctI	GAATGC	1 cut(s)	166
PfeI	GAWTC	4 cut(s)	133, 308, 1279, 2294
PflFI	GACNNNGTC	1 cut(s)	395
PkrI	GCNGC	9 cut(s)	129, 349, 628, 688, 1009, 1306, 1324, 1908, 2256
PleI	GAGTC	3 cut(s)	869, 1159, 1937
PluTI	GGCGCC	1 cut(s)	1167
PpsI	GAGTC	3 cut(s)	869, 1159, 1937
PpuMI	RGGWCCY	2 cut(s)	52, 391
PscI	ACATGT	1 cut(s)	1489
Psp5II	RGGWCCY	2 cut(s)	52, 391
Psp6I	CCWGG	1 cut(s)	951
PspEI	GGTNACC	2 cut(s)	74, 524
PspGI	CCWGG	1 cut(s)	951
PspN4I	GGNNCC	3 cut(s)	1165, 1719, 1851
PspPI	GGNCC	5 cut(s)	52, 391, 1849, 2005, 2173
PspPPI	RGGWCCY	2 cut(s)	52, 391
PspXI	VCTCGAGB	1 cut(s)	373
PstI	CTGCAG	2 cut(s)	1324, 2293
PstNI	CAGNNNCTG	3 cut(s)	592, 629, 1154
PsuI	RGATCY	2 cut(s)	779, 931
PsyI	GACNNNGTC	1 cut(s)	395
PvuII	CAGCTG	2 cut(s)	1724, 1906
RsaI	GTAC	4 cut(s)	617, 1002, 1494, 2122
RsaNI	GTAC	4 cut(s)	616, 1001, 1493, 2121
RseI	CAYNNNNRTG	1 cut(s)	1043
SapI	GCTCTTC	1 cut(s)	1188
SaqAI	TTAA	6 cut(s)	228, 483, 537, 788, 1403, 1824
SatI	GCNGC	9 cut(s)	128, 348, 627, 687, 1008, 1305, 1323, 1907, 2255
Sau96I	GGNCC	5 cut(s)	52, 391, 1849, 2005, 2173
ScaI	AGTACT	1 cut(s)	1002
SchI	GAGTC	3 cut(s)	869, 1160, 1937
ScrFI	CCNGG	1 cut(s)	953
SduI	GDGCHC	4 cut(s)	151, 859, 1442, 2014
SfaNI	GCATC	2 cut(s)	193, 821
SfcI	CTRYAG	5 cut(s)	1067, 1320, 1443, 1764, 2289
SfoI	GGCGCC	1 cut(s)	1165
Sfr274I	CTCGAG	1 cut(s)	373
SinI	GGWCC	4 cut(s)	52, 391, 1849, 2173
SlaI	CTCGAG	1 cut(s)	373
SmiMI	CAYNNNNRTG	1 cut(s)	1043
SmlI	CTYRAG	5 cut(s)	29, 56, 373, 806, 1806
SmoI	CTYRAG	5 cut(s)	29, 56, 373, 806, 1806
SsiI	CCGC	2 cut(s)	130, 627
SspDI	GGCGCC	1 cut(s)	1163
SspI	AATATT	1 cut(s)	1076
SspMI	CTAG	3 cut(s)	1004, 1145, 1239
StyD4I	CCNGG	1 cut(s)	951
TaaI	ACNGT	9 cut(s)	265, 588, 793, 1287, 1529, 1834, 2125, 2134, 2155
TaiI	ACGT	1 cut(s)	1410
TaqI	TCGA	6 cut(s)	374, 743, 1615, 1743, 1967, 2064
TatI	WGTACW	3 cut(s)	615, 1000, 2120
TauI	GCSGC	1 cut(s)	629
TfiI	GAWTC	4 cut(s)	133, 308, 1279, 2294
Tru1I	TTAA	6 cut(s)	228, 483, 537, 788, 1403, 1824
Tru9I	TTAA	6 cut(s)	228, 483, 537, 788, 1403, 1824
TscAI	CASTG	6 cut(s)	88, 571, 1093, 1442, 1681, 1837
TseFI	GTSAC	4 cut(s)	74, 274, 524, 2186
TseI	GCWGC	8 cut(s)	127, 347, 686, 1007, 1304, 1322, 1906, 2254
Tsp45I	GTSAC	4 cut(s)	74, 274, 524, 2186
TspDTI	ATGAA	9 cut(s)	246, 900, 1203, 1241, 1389, 1763, 2061, 2234, 2243
TspGWI	ACGGA	1 cut(s)	2116
TspRI	CASTG	6 cut(s)	88, 571, 1093, 1442, 1681, 1837
Tth111I	GACNNNGTC	1 cut(s)	395
VneI	GTGCAC	2 cut(s)	855, 1438
VpaK11BI	GGWCC	4 cut(s)	52, 391, 1849, 2173
XagI	CCTNNNNNAGG	1 cut(s)	1551
XapI	RAATTY	4 cut(s)	457, 1213, 1573, 2108
XceI	RCATGY	1 cut(s)	1493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1539
XhoI	CTCGAG	1 cut(s)	373
XmiI	GTMKAC	1 cut(s)	1685
XspI	CTAG	3 cut(s)	1004, 1145, 1239
ZrmI	AGTACT	1 cut(s)	1002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.