Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Forward (+)

51866793 .. 51868940

Gene Structure 2148 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0415300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGATTCTGATAATGATAATTGTCTGATCCAAGGATTTGTATGTTTAAGGACGGCATCTGGCGCCGGTTATCTGCTGCTTGAGGCTTCTCAAACTGGAAATGTCCAGCTTTTGCATCAATTGCTGAGAGACGATCCACAGCTTCTGCATAATGTTTTGCTAGCTTCCGGAGAGAACCCCTTGTATGTTGCTTCCGCTGCTGGTCATGTGGAATTTGTCGAGGTGGTTCTAGAGTTGAAACCAGCTTTGGCCAAAGTATTCAACAAGGATGGCTTTAGCCCCATGGATGTGGCATCTGCCAATGGCTATCTGGAGATTGTAAGGGCTCTGCAGAAAGCTTTACCTGAACTCTCCCAGGATAAAGGAAAAGATCGGTGGACTCCACTGCATCATGCTGCTAGAAGAGGGAGGGTAGATGTTATCCGAGAAATAGTTTCGGCTTGTCCAGAAAGTGTTGAAGATGTGACGAGACAAGGGGAGACTGCGTTACACCTTGTTGTTAAGAACAGCCAATTTGAAGCAATAAGAGTCCTGTTGGAATTGGTGCGAGAAATGGACAAGCTGCATGTCATGAATATGAAGGATAATCTTGGCAACTCAGTTCTTCATGTAGCAACTTGGAAAAAGCAACACCAGGTGGTGGAATGGCTAGTTGGCATTGGAACTGCTCCAGGGGGTGTGTTGGAAGTAGACAGTGTAAATCAGAGGGGTCTCACTGCTCTTGATCTGCTACTACTTTTCCCTAGTGAAGCCGGTGATAGGGAAATTGAGGAGATCCTTCGTGATGCTGGAGCTTTGAGAGCACGAGAGAGAGTCCAGTCTTGTTCTGATGTACCTTCATATGCTCAAAACCATAGCCAAATGGCATCAGAGACTCATCAACAGCAGCCAAATAATGTGGCTTCCACAGCACTAGATACAGTCCATTCTAGTTCGGGTCAGAATCATAACCAAATGGTACAACAGGCCCATCAAGAGCAGGTGGCTCTGACAGCAATAGATATAGTCCATCCTAACCAATTGGCACAACAGACCAATCAAGAGCAGGGGGCTTCAACAGCAATAGATATAGTCCATCCTAGTTCTGATGTGCCTTCACTGAATCAGAATCATAACCAAATGGCACCACAAGCCCATCAAGAGCAGGGTGCTTCGACAGCGATAGATATAGTCCATCCGAGTTCTGATGTGCCTTCACTTAATCAGAATCATAACCAAATAGCACCACAGACCACTGAAGAACAGCCAAATAATGTGGCTTCGACAACAGTAGCTCCAGTCCATCCTGTTTCTGCTCAAATCACTGGCTCTCCTAGTCAGAACCGCACTCAAATTGGATCACAGACTGATCAAGAGGAGCTAGACGGTATGGAGTACTTCAAATTCAAAAAGGGTATAGACCCCGTTGATAATGCACGTACCGCGCTGTTAGTTATAGCTGTATTAGTGGCTACAGCGAGCTATGAAATTGCACTCAACCCTCCAGGCGGTCTTTGGTCTGACACAAACTTGAGCACAAATGGCACTGAGCCACCACACCTTGCAGGGACTTCCAATATAGCTTCTTATTTTCCAGTTTACACCATCTTTGGAGCCATTTTAAACTGCATTGGGTTTTCAGTTTCTCTTCACATGATCTATGTCCTCACAACCAATTTCCCCTTGCGGTTGGAGCTTATTGTTTGTGGCCTTGCAATGTACGTAACTTTCATCAATGGATTGATTACTATTTCGCCAGGTGAGACCGCAGGTTGGTACTCACTGTTTGCACTTACGCCAGCTTTGCCTCCGGTGGTATTATTTGCTGCCAGAAGGATTAGGAAACTTTTGATCAAGCTTAGAGACCTTGCTGCCAGAACGGTTGGGAAACTTTGGATCAAGCTTAAAACCCTTCTAATTAGCCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

635

Amino Acids

69.18

Weight (kDa)

5.62

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	27 - 111	2.6e-09	Ankyrin repeats (3 copies)
Ank_2	PF12796	120 - 180	2.2e-09	Ankyrin repeats (3 copies)
Ank_4	PF13637	129 - 179	2.9e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	156 - 218	5.1e-08	Ankyrin repeats (3 copies)
PGG	PF13962	470 - 553	1.1e-11	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	970
Acc36I	ACCTGC	2 cut(s)	970, 1739
AccB1I	GGYRCC	2 cut(s)	62, 1123
AccB7I	CCANNNNNTGG	1 cut(s)	640
AccI	GTMKAC	1 cut(s)	690
AccII	CGCG	1 cut(s)	1424
AccIII	TCCGGA	1 cut(s)	167
AciI	CCGC	6 cut(s)	195, 1324, 1422, 1488, 1666, 1746
AclWI	GGATC	5 cut(s)	22, 128, 769, 1345, 1883
AcoI	YGGCCR	1 cut(s)	249
AcsI	RAATTY	2 cut(s)	212, 1382
AcuI	CTGAAG	1 cut(s)	1257
AcyI	GRCGYC	1 cut(s)	63
AdeI	CACNNNGTG	1 cut(s)	637
AfaI	GTAC	6 cut(s)	834, 960, 1376, 1420, 1700, 1757
AfiI	CCNNNNNNNGG	4 cut(s)	640, 759, 1487, 1752
AgsI	TTSAA	7 cut(s)	238, 262, 458, 518, 1056, 1381, 1387
AjnI	CCWGG	5 cut(s)	354, 633, 670, 1483, 1735
AjuI	GAANNNNNNNTTGG	4 cut(s)	230, 262, 636, 668
Alw21I	GWGCWC	2 cut(s)	805, 1517
Alw26I	GTCTC	7 cut(s)	123, 463, 473, 716, 866, 1736, 1836
AlwI	GGATC	5 cut(s)	22, 128, 769, 1345, 1883
AlwNI	CAGNNNCTG	1 cut(s)	145
Aor13HI	TCCGGA	1 cut(s)	167
AoxI	GGCC	3 cut(s)	249, 966, 1687
ApeKI	GCWGC	7 cut(s)	76, 197, 395, 562, 886, 1805, 1850
ApoI	RAATTY	2 cut(s)	212, 1382
AspLEI	GCGC	2 cut(s)	65, 1426
AspS9I	GGNCC	1 cut(s)	967
AsuHPI	GGTGA	2 cut(s)	767, 1751
AsuNHI	GCTAGC	1 cut(s)	160
BalI	TGGCCA	1 cut(s)	251
BanI	GGYRCC	2 cut(s)	62, 1123
BanII	GRGCYC	1 cut(s)	328
BauI	CACGAG	1 cut(s)	804
Bbv12I	GWGCWC	2 cut(s)	805, 1517
BbvI	GCAGC	7 cut(s)	63, 184, 382, 549, 898, 1792, 1837
BccI	CCATC	8 cut(s)	263, 978, 1017, 1083, 1143, 1182, 1290, 1592
BceAI	ACGGC	1 cut(s)	69
BciT130I	CCWGG	5 cut(s)	356, 635, 672, 1485, 1737
BclI	TGATCA	2 cut(s)	1348, 1830
BcoDI	GTCTC	7 cut(s)	123, 463, 473, 716, 866, 1736, 1836
BfmI	CTRYAG	2 cut(s)	329, 1452
BfoI	RGCGCY	1 cut(s)	66
BfuAI	ACCTGC	2 cut(s)	970, 1739
BisI	GCNGC	7 cut(s)	77, 198, 396, 563, 887, 1806, 1851
BlsI	GCNGC	7 cut(s)	78, 199, 397, 564, 888, 1807, 1852
BmcAI	AGTACT	1 cut(s)	1376
Bme1390I	CCNGG	5 cut(s)	356, 635, 672, 1485, 1737
BmgT120I	GGNCC	1 cut(s)	967
BmiI	GGNNCC	3 cut(s)	64, 1125, 1594
BmrFI	CCNGG	5 cut(s)	356, 635, 672, 1485, 1737
BmsI	GCATC	6 cut(s)	65, 124, 302, 397, 775, 875
BmtI	GCTAGC	1 cut(s)	164
BpmI	CTGGAG	5 cut(s)	332, 654, 810, 1260, 1467
BpuEI	CTTGAG	2 cut(s)	101, 1531
BsaAI	YACGTR	2 cut(s)	1418, 1702
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	3 cut(s)	716, 1736, 1836
BsaJI	CCNNGG	4 cut(s)	31, 282, 354, 671
BsaWI	WCCGGW	2 cut(s)	167, 1789
BsaXI	ACNNNNNCTCC	6 cut(s)	470, 500, 1258, 1288, 1294, 1324
Bsc4I	CCNNNNNNNGG	4 cut(s)	640, 759, 1487, 1752
Bse118I	RCCGGY	3 cut(s)	65, 752, 1902
Bse1I	ACTGG	5 cut(s)	100, 817, 1277, 1309, 1574
Bse3DI	GCAATG	1 cut(s)	1701
BseAI	TCCGGA	1 cut(s)	167
BseBI	CCWGG	5 cut(s)	356, 635, 672, 1485, 1737
BseDI	CCNNGG	4 cut(s)	31, 282, 354, 671
BseGI	GGATG	6 cut(s)	274, 292, 1009, 1075, 1174, 1282
BseLI	CCNNNNNNNGG	4 cut(s)	640, 759, 1487, 1752
BseMI	GCAATG	1 cut(s)	1701
BseMII	CTCAG	3 cut(s)	116, 612, 1518
BseNI	ACTGG	5 cut(s)	100, 817, 1277, 1309, 1574
BseRI	GAGGAG	2 cut(s)	785, 1370
BseXI	GCAGC	7 cut(s)	63, 184, 382, 549, 898, 1792, 1837
Bsh1236I	CGCG	1 cut(s)	1424
BshFI	GGCC	3 cut(s)	251, 968, 1689
BshNI	GGYRCC	2 cut(s)	62, 1123
BsiHKAI	GWGCWC	2 cut(s)	805, 1517
BsiSI	CCGG	5 cut(s)	66, 168, 753, 1790, 1903
BslFI	GGGAC	1 cut(s)	1561
BslI	CCNNNNNNNGG	4 cut(s)	640, 759, 1487, 1752
BsmAI	GTCTC	7 cut(s)	123, 463, 473, 716, 866, 1736, 1836
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	1 cut(s)	1561
BsnI	GGCC	3 cut(s)	251, 968, 1689
Bso31I	GGTCTC	3 cut(s)	716, 1736, 1836
Bsp1286I	GDGCHC	3 cut(s)	328, 805, 1517
Bsp13I	TCCGGA	1 cut(s)	167
Bsp19I	CCATGG	1 cut(s)	282
BspACI	CCGC	6 cut(s)	195, 1324, 1422, 1488, 1666, 1746
BspANI	GGCC	3 cut(s)	251, 968, 1689
BspCNI	CTCAG	3 cut(s)	117, 611, 1519
BspEI	TCCGGA	1 cut(s)	167
BspFNI	CGCG	1 cut(s)	1424
BspHI	TCATGA	1 cut(s)	570
BspLI	GGNNCC	3 cut(s)	64, 1125, 1594
BspMAI	CTGCAG	1 cut(s)	333
BspMI	ACCTGC	2 cut(s)	970, 1739
BspOI	GCTAGC	1 cut(s)	164
BspPI	GGATC	5 cut(s)	22, 128, 769, 1345, 1883
BspT107I	GGYRCC	2 cut(s)	62, 1123
BspTNI	GGTCTC	3 cut(s)	716, 1736, 1836
BsrDI	GCAATG	1 cut(s)	1701
BsrFI	RCCGGY	3 cut(s)	65, 752, 1902
BsrI	ACTGG	5 cut(s)	100, 817, 1277, 1309, 1574
BssAI	RCCGGY	3 cut(s)	65, 752, 1902
BssECI	CCNNGG	4 cut(s)	31, 282, 354, 671
BssNI	GRCGYC	1 cut(s)	63
BssSI	CACGAG	1 cut(s)	804
BssT1I	CCWWGG	2 cut(s)	31, 282
Bst2BI	CACGAG	1 cut(s)	804
Bst2UI	CCWGG	5 cut(s)	356, 635, 672, 1485, 1737
Bst4CI	ACNGT	6 cut(s)	695, 922, 1270, 1367, 1764, 1861
Bst6I	CTCTTC	2 cut(s)	397, 1632
BstACI	GRCGYC	1 cut(s)	63
BstAPI	GCANNNNNTGC	1 cut(s)	121
BstBAI	YACGTR	2 cut(s)	1418, 1702
BstC8I	GCNNGC	3 cut(s)	162, 1459, 1779
BstDEI	CTNAG	4 cut(s)	125, 598, 1527, 1838
BstDSI	CCRYGG	1 cut(s)	282
BstF5I	GGATG	6 cut(s)	274, 292, 1009, 1075, 1174, 1282
BstFNI	CGCG	1 cut(s)	1424
BstH2I	RGCGCY	1 cut(s)	66
BstHHI	GCGC	2 cut(s)	65, 1426
BstMAI	GTCTC	7 cut(s)	123, 463, 473, 716, 866, 1736, 1836
BstNI	CCWGG	5 cut(s)	356, 635, 672, 1485, 1737
BstNSI	RCATGY	1 cut(s)	569
BstSCI	CCNGG	5 cut(s)	354, 633, 670, 1483, 1735
BstSFI	CTRYAG	2 cut(s)	329, 1452
BstSNI	TACGTA	1 cut(s)	1702
BstUI	CGCG	1 cut(s)	1424
BstV1I	GCAGC	7 cut(s)	63, 184, 382, 549, 898, 1792, 1837
BstX2I	RGATCY	1 cut(s)	774
BstXI	CCANNNNNNTGG	1 cut(s)	289
BstYI	RGATCY	1 cut(s)	774
BsuRI	GGCC	3 cut(s)	251, 968, 1689
BtgI	CCRYGG	1 cut(s)	282
BtsCI	GGATG	6 cut(s)	274, 292, 1009, 1075, 1174, 1282
BtsI	GCAGTG	2 cut(s)	383, 714
BtsIMutI	CAGTG	8 cut(s)	383, 700, 714, 1097, 1233, 1302, 1524, 1760
BveI	ACCTGC	2 cut(s)	970, 1739
Cac8I	GCNNGC	3 cut(s)	162, 1459, 1779
CaiI	CAGNNNCTG	1 cut(s)	145
CciI	TCATGA	1 cut(s)	570
CfoI	GCGC	2 cut(s)	65, 1426
Cfr10I	RCCGGY	3 cut(s)	65, 752, 1902
Cfr13I	GGNCC	1 cut(s)	967
CsiI	ACCWGGT	1 cut(s)	633
Csp6I	GTAC	6 cut(s)	833, 959, 1375, 1419, 1699, 1756
CspCI	CAANNNNNGTGG	4 cut(s)	879, 914, 1236, 1271
CviAII	CATG	7 cut(s)	206, 283, 392, 566, 571, 608, 1633
CviQI	GTAC	6 cut(s)	833, 959, 1375, 1419, 1699, 1756
DdeI	CTNAG	4 cut(s)	125, 598, 1527, 1838
DinI	GGCGCC	1 cut(s)	64
DraI	TTTAAA	1 cut(s)	1602
DraIII	CACNNNGTG	1 cut(s)	637
EaeI	YGGCCR	1 cut(s)	249
Eam1104I	CTCTTC	2 cut(s)	397, 1632
EarI	CTCTTC	2 cut(s)	397, 1632
Eco105I	TACGTA	1 cut(s)	1702
Eco130I	CCWWGG	2 cut(s)	31, 282
Eco24I	GRGCYC	1 cut(s)	328
Eco31I	GGTCTC	3 cut(s)	716, 1736, 1836
Eco57I	CTGAAG	1 cut(s)	1257
EcoRII	CCWGG	5 cut(s)	354, 633, 670, 1483, 1735
EcoT14I	CCWWGG	2 cut(s)	31, 282
EcoT38I	GRGCYC	1 cut(s)	328
EgeI	GGCGCC	1 cut(s)	64
EheI	GGCGCC	1 cut(s)	64
ErhI	CCWWGG	2 cut(s)	31, 282
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	7 cut(s)	209, 286, 395, 569, 574, 611, 1636
FalI	AAGNNNNNCTT	2 cut(s)	257, 289
FaqI	GGGAC	1 cut(s)	1561
FatI	CATG	7 cut(s)	205, 282, 391, 565, 570, 607, 1632
FauNDI	CATATG	1 cut(s)	841
FbaI	TGATCA	2 cut(s)	1348, 1830
FblI	GTMKAC	1 cut(s)	690
Fnu4HI	GCNGC	7 cut(s)	77, 198, 396, 563, 887, 1806, 1851
FokI	GGATG	6 cut(s)	281, 299, 996, 1062, 1161, 1269
FriOI	GRGCYC	1 cut(s)	328
Fsp4HI	GCNGC	7 cut(s)	77, 198, 396, 563, 887, 1806, 1851
GlaI	GCGC	2 cut(s)	64, 1425
GluI	GCNGC	7 cut(s)	77, 198, 396, 563, 887, 1806, 1851
GsuI	CTGGAG	5 cut(s)	332, 654, 810, 1260, 1467
HaeII	RGCGCY	1 cut(s)	66
HaeIII	GGCC	3 cut(s)	251, 968, 1689
HapII	CCGG	5 cut(s)	66, 168, 753, 1790, 1903
HhaI	GCGC	2 cut(s)	65, 1426
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	7 cut(s)	209, 286, 395, 569, 574, 611, 1636
Hin6I	GCGC	2 cut(s)	63, 1424
HinP1I	GCGC	2 cut(s)	63, 1424
HindIII	AAGCTT	3 cut(s)	336, 1835, 1880
HinfI	GANTC	9 cut(s)	5, 379, 528, 813, 874, 943, 1102, 1108, 1207
HpaII	CCGG	5 cut(s)	66, 168, 753, 1790, 1903
HphI	GGTGA	2 cut(s)	767, 1751
Hpy166II	GTNNAC	3 cut(s)	378, 691, 1579
Hpy8I	GTNNAC	3 cut(s)	378, 691, 1579
HpyAV	CCTTC	7 cut(s)	574, 788, 846, 1104, 1203, 1806, 1901
HpyCH4III	ACNGT	6 cut(s)	695, 922, 1270, 1367, 1764, 1861
HpyCH4IV	ACGT	2 cut(s)	1417, 1701
HpyF3I	CTNAG	4 cut(s)	125, 598, 1527, 1838
HpySE526I	ACGT	2 cut(s)	1417, 1701
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	7 cut(s)	209, 286, 395, 569, 574, 611, 1636
HspAI	GCGC	2 cut(s)	63, 1424
KasI	GGCGCC	1 cut(s)	62
Kpn2I	TCCGGA	1 cut(s)	167
Ksp22I	TGATCA	2 cut(s)	1348, 1830
LmnI	GCTCC	6 cut(s)	673, 791, 1279, 1357, 1592, 1672
Lsp1109I	GCAGC	7 cut(s)	63, 184, 382, 549, 898, 1792, 1837
LweI	GCATC	6 cut(s)	65, 124, 302, 397, 775, 875
MabI	ACCWGGT	1 cut(s)	633
MaeII	ACGT	2 cut(s)	1417, 1701
MaeIII	GTNAC	3 cut(s)	463, 486, 1702
MboII	GAAGA	5 cut(s)	414, 470, 596, 1250, 1619
MfeI	CAATTG	2 cut(s)	119, 1019
MflI	RGATCY	1 cut(s)	774
MhlI	GDGCHC	3 cut(s)	328, 805, 1517
MlsI	TGGCCA	1 cut(s)	251
MluNI	TGGCCA	1 cut(s)	251
Mly113I	GGCGCC	1 cut(s)	63
MlyI	GAGTC	4 cut(s)	373, 537, 822, 868
MmeI	TCCRAC	3 cut(s)	516, 663, 1650
Mox20I	TGGCCA	1 cut(s)	251
MroI	TCCGGA	1 cut(s)	167
MscI	TGGCCA	1 cut(s)	251
MseI	TTAA	5 cut(s)	47, 501, 1200, 1601, 1884
MslI	CAYNNNNRTG	2 cut(s)	287, 575
Msp20I	TGGCCA	1 cut(s)	251
MspA1I	CMGCKG	1 cut(s)	197
MspI	CCGG	5 cut(s)	66, 168, 753, 1790, 1903
MspR9I	CCNGG	5 cut(s)	356, 635, 672, 1485, 1737
MunI	CAATTG	2 cut(s)	119, 1019
MvaI	CCWGG	5 cut(s)	356, 635, 672, 1485, 1737
MvnI	CGCG	1 cut(s)	1424
NarI	GGCGCC	1 cut(s)	63
NcoI	CCATGG	1 cut(s)	282
NdeI	CATATG	1 cut(s)	841
NheI	GCTAGC	1 cut(s)	160
NlaIII	CATG	7 cut(s)	209, 286, 395, 569, 574, 611, 1636
NlaIV	GGNNCC	3 cut(s)	64, 1125, 1594
NmuCI	GTSAC	1 cut(s)	463
NspI	RCATGY	1 cut(s)	569
PagI	TCATGA	1 cut(s)	570
PaqCI	CACCTGC	1 cut(s)	970
PfeI	GAWTC	5 cut(s)	5, 943, 1102, 1108, 1207
PflMI	CCANNNNNTGG	1 cut(s)	640
PkrI	GCNGC	7 cut(s)	78, 199, 397, 564, 888, 1807, 1852
PleI	GAGTC	4 cut(s)	373, 536, 821, 868
PluTI	GGCGCC	1 cut(s)	66
PpsI	GAGTC	4 cut(s)	373, 536, 821, 868
Ppu21I	YACGTR	2 cut(s)	1418, 1702
Psp6I	CCWGG	5 cut(s)	354, 633, 670, 1483, 1735
PspGI	CCWGG	5 cut(s)	354, 633, 670, 1483, 1735
PspN4I	GGNNCC	3 cut(s)	64, 1125, 1594
PspPI	GGNCC	1 cut(s)	967
PstI	CTGCAG	1 cut(s)	333
PstNI	CAGNNNCTG	1 cut(s)	145
PsuI	RGATCY	1 cut(s)	774
RsaI	GTAC	6 cut(s)	834, 960, 1376, 1420, 1700, 1757
RsaNI	GTAC	6 cut(s)	833, 959, 1375, 1419, 1699, 1756
RseI	CAYNNNNRTG	2 cut(s)	287, 575
SaqAI	TTAA	5 cut(s)	47, 501, 1200, 1601, 1884
SatI	GCNGC	7 cut(s)	77, 198, 396, 563, 887, 1806, 1851
Sau96I	GGNCC	1 cut(s)	967
ScaI	AGTACT	1 cut(s)	1376
SchI	GAGTC	4 cut(s)	373, 537, 822, 868
ScrFI	CCNGG	5 cut(s)	356, 635, 672, 1485, 1737
SduI	GDGCHC	3 cut(s)	328, 805, 1517
SexAI	ACCWGGT	1 cut(s)	633
SfaNI	GCATC	6 cut(s)	65, 124, 302, 397, 775, 875
SfcI	CTRYAG	2 cut(s)	329, 1452
SfoI	GGCGCC	1 cut(s)	64
SmiMI	CAYNNNNRTG	2 cut(s)	287, 575
SmlI	CTYRAG	2 cut(s)	80, 1510
SmoI	CTYRAG	2 cut(s)	80, 1510
SnaBI	TACGTA	1 cut(s)	1702
SsiI	CCGC	6 cut(s)	195, 1324, 1422, 1488, 1666, 1746
SspDI	GGCGCC	1 cut(s)	62
StyD4I	CCNGG	5 cut(s)	354, 633, 670, 1483, 1735
StyI	CCWWGG	2 cut(s)	31, 282
TaaI	ACNGT	6 cut(s)	695, 922, 1270, 1367, 1764, 1861
TaiI	ACGT	2 cut(s)	1420, 1704
TaqI	TCGA	3 cut(s)	219, 1154, 1262
TatI	WGTACW	1 cut(s)	1374
TfiI	GAWTC	5 cut(s)	5, 943, 1102, 1108, 1207
Tru1I	TTAA	5 cut(s)	47, 501, 1200, 1601, 1884
Tru9I	TTAA	5 cut(s)	47, 501, 1200, 1601, 1884
TscAI	CASTG	8 cut(s)	390, 700, 721, 1104, 1240, 1309, 1531, 1767
TseFI	GTSAC	1 cut(s)	463
TseI	GCWGC	7 cut(s)	76, 197, 395, 562, 886, 1805, 1850
Tsp45I	GTSAC	1 cut(s)	463
TspDTI	ATGAA	6 cut(s)	587, 593, 596, 828, 1479, 1699
TspRI	CASTG	8 cut(s)	390, 700, 721, 1104, 1240, 1309, 1531, 1767
Van91I	CCANNNNNTGG	1 cut(s)	640
XapI	RAATTY	2 cut(s)	212, 1382
XbaI	TCTAGA	1 cut(s)	229
XceI	RCATGY	1 cut(s)	569
XcmI	CCANNNNNNNNNTGG	2 cut(s)	307, 1491
XmiI	GTMKAC	1 cut(s)	690
ZrmI	AGTACT	1 cut(s)	1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.