Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014259.1

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

35593 .. 41123

Gene Structure 5531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014259.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4365 bp

atggaggacttatggagtggattttgtggggaatctggaggttctgagggtttgagttttcggtttctggttcatccttcttcatgcattaatcacgctttgataattttcctagacatagttcttcttgtggtgctcttgttcagtatgtttatcaagtcatcaaaaagagttcatgttccagcacgatttctaggcttttcgagttggcaaatagtctcggccattttcaatggcggtcttggatttgtgtacttgtgcttgggagcctggtatttagaagagaagctgaggaatacacatacagctttgcctttgaattggtggttacttggtctttttcaaggcttcacatggttggttttgagcttaactctaagcatcagggtgcagcaacttccaagacaaccttcaagactgttgtgcctccttgcttttttgttctctggagttgtctttgctctatcgctcttcgctgtcattttcagaaatgaaatgtcatttaagatagtactagatatcctgactttcccaggagcagcattgttgctgttatgtgttttcaaggggtataagtatgaagatggtgatgagatcatcagtgacgatggcctttatgcccctctcaatggtgagtccaatggtattagtaaaggtaatgatcatgcaaccccatttagcaaagctggattgttaagtaaaatgtcattttggtggttaaattcattgatgaaaagaggtaggcagaaaactctggaggatgaagatataccgaagttgcgcaaggaagatagagcagaaagttgctattcgatgttcttggagcaactgagcaagcagaaacaaattgagccatcttcccagccgtcagtattaaagactataatcctatgccactggaaggagattttactatctggtttctttgctttgctgaagatactcactatttgtgctggtcctttgcttctcaatgccttcattttggttgcagagggaaatgaaagtttcgagcatgaaggttatctgttagccggagcactttttgcttcgaaaaccattgaatccttgtcacaaaggcagtggtacttcaggtgcaggcttattggtttgaaagttaggtctttgctgacagcagccatttacaaaaagcaattgagattatctaatgctgctaagttgacacactcaggtggtgagatcatgaattatgttactgtggatgcttataggattggagagtttccattttggttccatcagacttggactactagcgtccagctctgtttttctttggtaattcttttccgtgcagtcggcctagctacatttgcagccttggtggtgatacttttgagtgtgatttgcaatgctccagttgctaagctacaacataagttccagagtaagcttatgaaggctcaagatgaaaggctcaaggctatttctgaggctctagtgaacatgaaggtcttaaagttatatgcatgggaaacacatttcaagaaggcaatagaaaagttaaggaaggaggagcacaaatggttatctgcaatgctgttaagaagagcatatagtacttatctattttggtcaactcctgttttggtctctactgcaacatttggggcatgctattttctcaaaattccgttacatgcgaacaacgttttcacttttatctcaactttgagacttgttcaggaccccattcgaaccatacctgatgtttttgcggttgtcattcaagccaaggttgcatttggtcgtattgtgaaattccttgaggcacctgagctgcaaacttcaaatgtccggaagtgcaacatgaagaatgtagctaattccattgaaattaagtcagctaatttttcatgggaagagaatttatcgaagtccatactgagaaatataaatttagaggttagacctggtgaaaaggtggctatatgtggtgaagtcggctcaggcaaatcaagtcttctagctgcaattcttggagaaattccaaatgtgcaaggaaatattcaagtttatgggaagattgcctatgtttctcaaacagcatggatccagtcaggaactatacaagaaaatattctctttggttcttgtatggatagtcagagataccgagagactcttgagagatgctcactagttaaggaccttgagctgcttccctatgatgaccttactgaaataggggagagaggggtgaatctaagtggaggtcagaagcagcggatccaacttgcacgcgctctctatcaggatgctgatatatatctcttggatgatccattcagtgccgttgatgcgcatactgccacaaacttatttaatgaatatgtaatggaagcactttcaggcaagacagtactacttgtgacccatcaagttgatttcctgcctgcatttgatttcgttttgttgatgatggatggggagatcctacaagcagctccttatcagcatctattggctttaagccaagaattccaggaccttgtcaatgcacacaaagaaactgctggttccgaaaggctttcagatgtcacttctgctcaaaattctggaatatcatctagagagattaagaagagctatgttgagaagccattaaaagaaaacaaaggtgaccaattgattaaactagaagagagagaaacaggagacacaggttttaagccatacatactgtatctgaaacagaacaaagggttcttgtacttctcaattgccgtttgtctccacttcacttttattatgagtcagattgcacagaactcttggatggctgctaatgttgataatccaagtattagcacattgcgatctcttgcagcagttgtcgggggccttgagacatcgaagtctttgttctcacaactgctaaactccctttttcgtgcacccatgtcattctatgactcaacacctctgggaaggatacttagtcgtgtttcatctgatctgagtatcacagatcttgatattccattcagcatagtatttgcttgtggagctaccatgaatgcctattgcaatcttggagtattgactgttgttacctggcaagtcttgtttgtctccataccaatggtctatgtcgcaattcagctacagaaatattacttttccactgcaaaagagttgatgaggatcaatggaacaactaagtcctttgtagcaaaccatctagccgagtctgtatcaggagccgttaccattagagcattcagtgaagaagagcgcttctcagcaaagagctttcacctcattgacacaaatgctagtccttatttccacagcttttccgcaaatgagtggttaatccaacggttagagataatcagtgcatcggttcttgcctctgcagcactttgtatggttttgcttcctcatggaacctttacctctgggtttattgggatggcactttcttatggtctatcactaaatgtgtccttgatcaactcaattcagaaccagtgcactatagcaaattacatcatttctgttgaaagactaaatcaatacatgcacattccaagcgaagccccagaagtaatagaaggaaaccgtccaccggccaactggccggttgtaggaaaagtggagatacaaaatttgcagataagatatagggatgacacaccacttgttcttcgagggattagttgtgtttttgaaggtggacataagattggtattgttggccggacaggcagtgggaagtctacactcatcggtgctttatttcggctggtcgagccaactggagggaagatcatagtcgatggcattgacatctgcactataggacttcatgatctaaggtcaagatttggaataatacctcaagaccctactctctttaatggcactgtcagatacaatttggaccccttatctcaacattcagaccagaaaatatgggaggttcttgggaagtgtcagctgcgagaggctgttgaggagaaagaaaaaggcttagactcgttagttgtggatgatggatcaaactggagcatggggcaaaggcaactgttctgcctcgggcgcgctcttctaaggagaagtcgggtattggtgcttgatgaagcaactgcatccattgacaatgcaactgatacaatcctgcagaagactataaggactgagtttgaagcttgtacagtaattacagtagctcacaggataccaactgtgatggattgcacaatggttcttgccattagtgatggaaagatagtggagtatgatgagccaatgaggttgatgaatagagaaggctcgctgtttgggcagcttgtcaaggagtactggtctcatctccagtctgcagaatctcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1454

Amino Acids

162.59

Weight (kDa)

7.68

Isoelectric Point (pI)

36.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2878
Acc16I	TGCGCA	2 cut(s)	782, 2325
AccB1I	GGYRCC	1 cut(s)	1792
AccI	GTMKAC	1 cut(s)	3746
AccII	CGCG	2 cut(s)	2265, 4071
AccIII	TCCGGA	1 cut(s)	1818
AciI	CCGC	4 cut(s)	237, 1739, 2248, 3324
AclI	AACGTT	1 cut(s)	1671
AclWI	GGATC	8 cut(s)	2068, 2081, 2245, 2258, 2297, 2449, 3176, 4033
AcoI	YGGCCR	4 cut(s)	222, 3597, 3605, 3724
AcsI	RAATTY	9 cut(s)	721, 1650, 1781, 1888, 1918, 2007, 2501, 2575, 3634
AcuI	CTGAAG	2 cut(s)	956, 1075
AfaI	GTAC	8 cut(s)	254, 513, 1088, 1582, 2385, 2735, 4183, 4331
AfeI	AGCGCT	1 cut(s)	3260
AfiI	CCNNNNNNNGG	5 cut(s)	629, 901, 3595, 3614, 3788
AhlI	ACTAGT	1 cut(s)	2161
AjnI	CCWGG	5 cut(s)	269, 532, 1933, 2505, 3077
AjuI	GAANNNNNNNTTGG	2 cut(s)	394, 426
AleI	CACNNNNGTG	1 cut(s)	1191
Alw21I	GWGCWC	5 cut(s)	138, 1042, 1542, 2920, 3503
Alw26I	GTCTC	9 cut(s)	223, 1618, 1690, 2135, 2673, 2759, 2864, 3100, 4341
Alw44I	GTGCAC	2 cut(s)	2916, 3499
AlwI	GGATC	8 cut(s)	2068, 2081, 2245, 2258, 2297, 2449, 3176, 4033
Ama87I	CYCGRG	1 cut(s)	4064
Aor13HI	TCCGGA	1 cut(s)	1818
Aor51HI	AGCGCT	1 cut(s)	3260
AoxI	GGCC	7 cut(s)	222, 610, 1321, 2863, 3597, 3605, 3724
ApaLI	GTGCAC	2 cut(s)	2916, 3499
ApoI	RAATTY	9 cut(s)	721, 1650, 1781, 1888, 1918, 2007, 2501, 2575, 3634
AseI	ATTAAT	1 cut(s)	90
Asp700I	GAANNNNTTC	1 cut(s)	2100
AspLEI	GCGC	6 cut(s)	783, 2267, 2326, 3261, 4071, 4073
AspS9I	GGNCC	6 cut(s)	959, 1708, 2170, 2509, 2863, 3910
AsuHPI	GGTGA	9 cut(s)	599, 644, 1208, 1360, 1949, 1970, 2233, 2654, 3272
AsuII	TTCGAA	2 cut(s)	1052, 1717
AvaI	CYCGRG	1 cut(s)	4064
AvaII	GGWCC	5 cut(s)	959, 1708, 2170, 2509, 3910
BaeGI	GKGCMC	2 cut(s)	2920, 3503
BamHI	GGATCC	2 cut(s)	2073, 2250
BanI	GGYRCC	1 cut(s)	1792
BbsI	GAAGAC	2 cut(s)	1976, 4160
Bbv12I	GWGCWC	5 cut(s)	138, 1042, 1542, 2920, 3503
BbvCI	CCTCAGC	1 cut(s)	290
BceAI	ACGGC	4 cut(s)	850, 2300, 2732, 3212
BciT130I	CCWGG	5 cut(s)	271, 534, 1935, 2507, 3079
BciVI	GTATCC	2 cut(s)	2949, 4200
BclI	TGATCA	2 cut(s)	661, 3477
BcoDI	GTCTC	9 cut(s)	223, 1618, 1690, 2135, 2673, 2759, 2864, 3100, 4341
BcuI	ACTAGT	1 cut(s)	2161
BfmI	CTRYAG	6 cut(s)	3128, 3381, 3504, 3825, 4148, 4350
BfoI	RGCGCY	1 cut(s)	3262
BfuI	GTATCC	2 cut(s)	2949, 4200
BglI	GCCNNNNNGGC	1 cut(s)	3732
BglII	AGATCT	1 cut(s)	2992
BlpI	GCTNAGC	1 cut(s)	1386
BmcAI	AGTACT	4 cut(s)	513, 1582, 2385, 4331
Bme1390I	CCNGG	5 cut(s)	271, 534, 1935, 2507, 3079
Bme18I	GGWCC	5 cut(s)	959, 1708, 2170, 2509, 3910
BmeT110I	CYCGRG	1 cut(s)	4064
BmgT120I	GGNCC	6 cut(s)	959, 1708, 2170, 2509, 2863, 3910
BmrFI	CCNGG	5 cut(s)	271, 534, 1935, 2507, 3079
BmsI	GCATC	8 cut(s)	390, 1213, 2144, 2269, 2311, 2488, 3374, 4127
BpiI	GAAGAC	2 cut(s)	1976, 4160
BplI	GAGNNNNNCTC	6 cut(s)	358, 390, 2141, 2173, 3248, 3280
BpmI	CTGGAG	7 cut(s)	57, 468, 776, 1362, 3807, 4054, 4328
Bpu10I	CCTNAGC	3 cut(s)	290, 1797, 1969
Bpu1102I	GCTNAGC	1 cut(s)	1386
Bpu14I	TTCGAA	2 cut(s)	1052, 1717
BpuEI	CTTGAG	7 cut(s)	1410, 1424, 1808, 2168, 2195, 2888, 3852
BsaBI	GATNNNNATC	2 cut(s)	2289, 3167
BsaI	GGTCTC	2 cut(s)	1618, 4341
BsaJI	CCNNGG	4 cut(s)	532, 1341, 1755, 4063
BsaWI	WCCGGW	1 cut(s)	1818
BsaXI	ACNNNNNCTCC	2 cut(s)	4319, 4349
Bsc4I	CCNNNNNNNGG	5 cut(s)	629, 901, 3595, 3614, 3788
Bse118I	RCCGGY	2 cut(s)	3595, 3607
Bse1I	ACTGG	9 cut(s)	902, 1379, 2077, 3496, 3608, 3790, 4037, 4337, 4345
Bse3DI	GCAATG	3 cut(s)	1378, 1563, 2834
Bse8I	GATNNNNATC	2 cut(s)	2289, 3167
BseAI	TCCGGA	1 cut(s)	1818
BseBI	CCWGG	5 cut(s)	271, 534, 1935, 2507, 3079
BseDI	CCNNGG	4 cut(s)	532, 1341, 1755, 4063
BseJI	GATNNNNATC	2 cut(s)	2289, 3167
BseLI	CCNNNNNNNGG	5 cut(s)	629, 901, 3595, 3614, 3788
BseMI	GCAATG	3 cut(s)	1378, 1563, 2834
BseNI	ACTGG	9 cut(s)	902, 1379, 2077, 3496, 3608, 3790, 4037, 4337, 4345
BsePI	GCGCGC	1 cut(s)	4069
BseRI	GAGGAG	2 cut(s)	1550, 3998
BseSI	GKGCMC	2 cut(s)	2920, 3503
BseYI	CCCAGC	1 cut(s)	861
BsgI	GTGCAG	4 cut(s)	410, 1117, 1335, 3805
Bsh1236I	CGCG	2 cut(s)	2265, 4071
BshFI	GGCC	7 cut(s)	224, 612, 1323, 2865, 3599, 3607, 3726
BshNI	GGYRCC	1 cut(s)	1792
BsiHKAI	GWGCWC	5 cut(s)	138, 1042, 1542, 2920, 3503
BsiHKCI	CYCGRG	1 cut(s)	4064
BsiSI	CCGG	5 cut(s)	1035, 1819, 3596, 3608, 3727
BslI	CCNNNNNNNGG	5 cut(s)	629, 901, 3595, 3614, 3788
BsmAI	GTCTC	9 cut(s)	223, 1618, 1690, 2135, 2673, 2759, 2864, 3100, 4341
BsmI	GAATGC	2 cut(s)	3046, 3242
BsnI	GGCC	7 cut(s)	224, 612, 1323, 2865, 3599, 3607, 3726
Bso31I	GGTCTC	2 cut(s)	1618, 4341
BsoBI	CYCGRG	1 cut(s)	4064
Bsp119I	TTCGAA	2 cut(s)	1052, 1717
Bsp1286I	GDGCHC	5 cut(s)	138, 1042, 1542, 2920, 3503
Bsp13I	TCCGGA	1 cut(s)	1818
Bsp1407I	TGTACA	1 cut(s)	4181
Bsp1720I	GCTNAGC	1 cut(s)	1386
BspACI	CCGC	4 cut(s)	237, 1739, 2248, 3324
BspANI	GGCC	7 cut(s)	224, 612, 1323, 2865, 3599, 3607, 3726
BspEI	TCCGGA	1 cut(s)	1818
BspFNI	CGCG	2 cut(s)	2265, 4071
BspHI	TCATGA	2 cut(s)	1203, 3835
BspMAI	CTGCAG	3 cut(s)	3385, 4152, 4354
BspPI	GGATC	8 cut(s)	2068, 2081, 2245, 2258, 2297, 2449, 3176, 4033
BspQI	GCTCTTC	5 cut(s)	476, 1564, 2600, 3249, 4080
BspT104I	TTCGAA	2 cut(s)	1052, 1717
BspT107I	GGYRCC	1 cut(s)	1792
BspTNI	GGTCTC	2 cut(s)	1618, 4341
BsrDI	GCAATG	3 cut(s)	1378, 1563, 2834
BsrFI	RCCGGY	2 cut(s)	3595, 3607
BsrGI	TGTACA	1 cut(s)	4181
BsrI	ACTGG	9 cut(s)	902, 1379, 2077, 3496, 3608, 3790, 4037, 4337, 4345
BssAI	RCCGGY	2 cut(s)	3595, 3607
BssECI	CCNNGG	4 cut(s)	532, 1341, 1755, 4063
BssHII	GCGCGC	1 cut(s)	4069
BssT1I	CCWWGG	2 cut(s)	1341, 1755
Bst2UI	CCWGG	5 cut(s)	271, 534, 1935, 2507, 3079
Bst6I	CTCTTC	8 cut(s)	276, 476, 1564, 1878, 2600, 2658, 3249, 4080
BstAPI	GCANNNNNTGC	1 cut(s)	1046
BstAUI	TGTACA	1 cut(s)	4181
BstBI	TTCGAA	2 cut(s)	1052, 1717
BstC8I	GCNNGC	7 cut(s)	836, 1100, 1636, 2263, 2418, 4071, 4304
BstEII	GGTNACC	1 cut(s)	2642
BstFNI	CGCG	2 cut(s)	2265, 4071
BstH2I	RGCGCY	1 cut(s)	3262
BstHHI	GCGC	6 cut(s)	783, 2267, 2326, 3261, 4071, 4073
BstMAI	GTCTC	9 cut(s)	223, 1618, 1690, 2135, 2673, 2759, 2864, 3100, 4341
BstNI	CCWGG	5 cut(s)	271, 534, 1935, 2507, 3079
BstNSI	RCATGY	3 cut(s)	1638, 1664, 3550
BstPI	GGTNACC	1 cut(s)	2642
BstSCI	CCNGG	5 cut(s)	269, 532, 1933, 2505, 3077
BstSFI	CTRYAG	6 cut(s)	3128, 3381, 3504, 3825, 4148, 4350
BstSLI	GKGCMC	2 cut(s)	2920, 3503
BstUI	CGCG	2 cut(s)	2265, 4071
BstV2I	GAAGAC	2 cut(s)	1976, 4160
BstX2I	RGATCY	4 cut(s)	2073, 2250, 2454, 2992
BstXI	CCANNNNNNTGG	1 cut(s)	3106
BstYI	RGATCY	4 cut(s)	2073, 2250, 2454, 2992
BsuI	GTATCC	2 cut(s)	2949, 4200
BsuRI	GGCC	7 cut(s)	224, 612, 1323, 2865, 3599, 3607, 3726
BtsI	GCAGTG	3 cut(s)	1088, 3147, 3742
Cac8I	GCNNGC	7 cut(s)	836, 1100, 1636, 2263, 2418, 4071, 4304
CciI	TCATGA	2 cut(s)	1203, 3835
CfoI	GCGC	6 cut(s)	783, 2267, 2326, 3261, 4071, 4073
Cfr10I	RCCGGY	2 cut(s)	3595, 3607
Cfr13I	GGNCC	6 cut(s)	959, 1708, 2170, 2509, 2863, 3910
CseI	GACGC	1 cut(s)	1267
CsiI	ACCWGGT	1 cut(s)	1933
Csp6I	GTAC	8 cut(s)	253, 512, 1087, 1581, 2384, 2734, 4182, 4330
CspCI	CAANNNNNGTGG	2 cut(s)	1064, 1099
CviQI	GTAC	8 cut(s)	253, 512, 1087, 1581, 2384, 2734, 4182, 4330
DrdI	GACNNNNNNGTC	1 cut(s)	2878
DseDI	GACNNNNNNGTC	1 cut(s)	2878
EaeI	YGGCCR	4 cut(s)	222, 3597, 3605, 3724
Eam1104I	CTCTTC	8 cut(s)	276, 476, 1564, 1878, 2600, 2658, 3249, 4080
EarI	CTCTTC	8 cut(s)	276, 476, 1564, 1878, 2600, 2658, 3249, 4080
Eco130I	CCWWGG	2 cut(s)	1341, 1755
Eco31I	GGTCTC	2 cut(s)	1618, 4341
Eco32I	GATATC	1 cut(s)	520
Eco47I	GGWCC	5 cut(s)	959, 1708, 2170, 2509, 3910
Eco47III	AGCGCT	1 cut(s)	3260
Eco57I	CTGAAG	2 cut(s)	956, 1075
Eco88I	CYCGRG	1 cut(s)	4064
Eco91I	GGTNACC	1 cut(s)	2642
EcoO109I	RGGNCCY	4 cut(s)	1708, 2170, 2509, 2863
EcoO65I	GGTNACC	1 cut(s)	2642
EcoRI	GAATTC	1 cut(s)	2501
EcoRII	CCWGG	5 cut(s)	269, 532, 1933, 2505, 3077
EcoRV	GATATC	1 cut(s)	520
EcoT14I	CCWWGG	2 cut(s)	1341, 1755
EcoT22I	ATGCAT	2 cut(s)	89, 1492
ErhI	CCWWGG	2 cut(s)	1341, 1755
FalI	AAGNNNNNCTT	2 cut(s)	394, 426
FbaI	TGATCA	2 cut(s)	661, 3477
FblI	GTMKAC	1 cut(s)	3746
FspAI	RTGCGCAY	1 cut(s)	2325
FspI	TGCGCA	2 cut(s)	782, 2325
GlaI	GCGC	6 cut(s)	782, 2266, 2325, 3260, 4070, 4072
GsaI	CCCAGC	1 cut(s)	865
GsuI	CTGGAG	7 cut(s)	57, 468, 776, 1362, 3807, 4054, 4328
HaeII	RGCGCY	1 cut(s)	3262
HaeIII	GGCC	7 cut(s)	224, 612, 1323, 2865, 3599, 3607, 3726
HapII	CCGG	5 cut(s)	1035, 1819, 3596, 3608, 3727
HgaI	GACGC	1 cut(s)	1267
HhaI	GCGC	6 cut(s)	783, 2267, 2326, 3261, 4071, 4073
Hin6I	GCGC	6 cut(s)	781, 2265, 2324, 3259, 4069, 4071
HinP1I	GCGC	6 cut(s)	781, 2265, 2324, 3259, 4069, 4071
HincII	GTYRAC	2 cut(s)	1182, 1599
HindII	GTYRAC	2 cut(s)	1182, 1599
HindIII	AAGCTT	2 cut(s)	1412, 4176
HpaII	CCGG	5 cut(s)	1035, 1819, 3596, 3608, 3727
HphI	GGTGA	9 cut(s)	599, 644, 1208, 1360, 1949, 1970, 2233, 2654, 3272
Hpy166II	GTNNAC	9 cut(s)	253, 1182, 1465, 1599, 2918, 3501, 3593, 3704, 3747
Hpy8I	GTNNAC	9 cut(s)	253, 1182, 1465, 1599, 2918, 3501, 3593, 3704, 3747
HpyCH4IV	ACGT	1 cut(s)	1671
HpySE526I	ACGT	1 cut(s)	1671
HspAI	GCGC	6 cut(s)	781, 2265, 2324, 3259, 4069, 4071
Kpn2I	TCCGGA	1 cut(s)	1818
Ksp22I	TGATCA	2 cut(s)	661, 3477
LguI	GCTCTTC	5 cut(s)	476, 1564, 2600, 3249, 4080
LweI	GCATC	8 cut(s)	390, 1213, 2144, 2269, 2311, 2488, 3374, 4127
MabI	ACCWGGT	1 cut(s)	1933
MaeII	ACGT	1 cut(s)	1671
MfeI	CAATTG	3 cut(s)	1154, 2648, 2742
MflI	RGATCY	4 cut(s)	2073, 2250, 2454, 2992
MhlI	GDGCHC	5 cut(s)	138, 1042, 1542, 2920, 3503
MlyI	GAGTC	6 cut(s)	644, 2137, 2785, 2930, 3221, 3998
MmeI	TCCRAC	2 cut(s)	2278, 3367
Mph1103I	ATGCAT	2 cut(s)	89, 1492
MroI	TCCGGA	1 cut(s)	1818
MroXI	GAANNNNTTC	1 cut(s)	2100
MslI	CAYNNNNRTG	4 cut(s)	386, 712, 1191, 3104
MspA1I	CMGCKG	2 cut(s)	2248, 3967
MspI	CCGG	5 cut(s)	1035, 1819, 3596, 3608, 3727
MspR9I	CCNGG	5 cut(s)	271, 534, 1935, 2507, 3079
MunI	CAATTG	3 cut(s)	1154, 2648, 2742
Mva1269I	GAATGC	2 cut(s)	3046, 3242
MvaI	CCWGG	5 cut(s)	271, 534, 1935, 2507, 3079
MvnI	CGCG	2 cut(s)	2265, 4071
NmeAIII	GCCGAG	2 cut(s)	200, 3235
NmuCI	GTSAC	5 cut(s)	602, 1071, 2392, 2560, 2642
NsbI	TGCGCA	2 cut(s)	782, 2325
NsiI	ATGCAT	2 cut(s)	89, 1492
NspI	RCATGY	3 cut(s)	1638, 1664, 3550
NspV	TTCGAA	2 cut(s)	1052, 1717
OliI	CACNNNNGTG	1 cut(s)	1191
PaeI	GCATGC	1 cut(s)	1638
PagI	TCATGA	2 cut(s)	1203, 3835
PauI	GCGCGC	1 cut(s)	4069
PciSI	GCTCTTC	5 cut(s)	476, 1564, 2600, 3249, 4080
PctI	GAATGC	2 cut(s)	3046, 3242
PdmI	GAANNNNTTC	1 cut(s)	2100
PfeI	GAWTC	4 cut(s)	32, 1064, 2224, 4355
PflFI	GACNNNGTC	1 cut(s)	2513
PfoI	TCCNGGA	1 cut(s)	2505
PleI	GAGTC	6 cut(s)	643, 2137, 2784, 2930, 3220, 3998
PpsI	GAGTC	6 cut(s)	643, 2137, 2784, 2930, 3220, 3998
PpuMI	RGGWCCY	3 cut(s)	1708, 2170, 2509
PshBI	ATTAAT	1 cut(s)	90
Psp1406I	AACGTT	1 cut(s)	1671
Psp5II	RGGWCCY	3 cut(s)	1708, 2170, 2509
Psp6I	CCWGG	5 cut(s)	269, 532, 1933, 2505, 3077
PspEI	GGTNACC	1 cut(s)	2642
PspFI	CCCAGC	1 cut(s)	861
PspGI	CCWGG	5 cut(s)	269, 532, 1933, 2505, 3077
PspPI	GGNCC	6 cut(s)	959, 1708, 2170, 2509, 2863, 3910
PspPPI	RGGWCCY	3 cut(s)	1708, 2170, 2509
PstI	CTGCAG	3 cut(s)	3385, 4152, 4354
PsuI	RGATCY	4 cut(s)	2073, 2250, 2454, 2992
PsyI	GACNNNGTC	1 cut(s)	2513
PteI	GCGCGC	1 cut(s)	4069
PvuII	CAGCTG	1 cut(s)	3967
RsaI	GTAC	8 cut(s)	254, 513, 1088, 1582, 2385, 2735, 4183, 4331
RsaNI	GTAC	8 cut(s)	253, 512, 1087, 1581, 2384, 2734, 4182, 4330
RseI	CAYNNNNRTG	4 cut(s)	386, 712, 1191, 3104
SapI	GCTCTTC	5 cut(s)	476, 1564, 2600, 3249, 4080
Sau96I	GGNCC	6 cut(s)	959, 1708, 2170, 2509, 2863, 3910
ScaI	AGTACT	4 cut(s)	513, 1582, 2385, 4331
SchI	GAGTC	6 cut(s)	644, 2137, 2785, 2930, 3221, 3998
ScrFI	CCNGG	5 cut(s)	271, 534, 1935, 2507, 3079
SduI	GDGCHC	5 cut(s)	138, 1042, 1542, 2920, 3503
SexAI	ACCWGGT	1 cut(s)	1933
SfaNI	GCATC	8 cut(s)	390, 1213, 2144, 2269, 2311, 2488, 3374, 4127
SfcI	CTRYAG	6 cut(s)	3128, 3381, 3504, 3825, 4148, 4350
SfuI	TTCGAA	2 cut(s)	1052, 1717
SinI	GGWCC	5 cut(s)	959, 1708, 2170, 2509, 3910
SmiMI	CAYNNNNRTG	4 cut(s)	386, 712, 1191, 3104
SmlI	CTYRAG	7 cut(s)	1425, 1439, 1787, 2147, 2174, 2867, 3867
SmoI	CTYRAG	7 cut(s)	1425, 1439, 1787, 2147, 2174, 2867, 3867
SpeI	ACTAGT	1 cut(s)	2161
SphI	GCATGC	1 cut(s)	1638
SsiI	CCGC	4 cut(s)	237, 1739, 2248, 3324
SspI	AATATT	3 cut(s)	2029, 2101, 3137
StyD4I	CCNGG	5 cut(s)	269, 532, 1933, 2505, 3077
StyI	CCWWGG	2 cut(s)	1341, 1755
TaiI	ACGT	1 cut(s)	1674
TatI	WGTACW	7 cut(s)	252, 511, 1580, 2383, 2733, 4181, 4329
TfiI	GAWTC	4 cut(s)	32, 1064, 2224, 4355
TseFI	GTSAC	5 cut(s)	602, 1071, 2392, 2560, 2642
Tsp45I	GTSAC	5 cut(s)	602, 1071, 2392, 2560, 2642
TspGWI	ACGGA	2 cut(s)	1301, 1644
Tth111I	GACNNNGTC	1 cut(s)	2513
VneI	GTGCAC	2 cut(s)	2916, 3499
VpaK11BI	GGWCC	5 cut(s)	959, 1708, 2170, 2509, 3910
VspI	ATTAAT	1 cut(s)	90
XapI	RAATTY	9 cut(s)	721, 1650, 1781, 1888, 1918, 2007, 2501, 2575, 3634
XbaI	TCTAGA	1 cut(s)	2591
XceI	RCATGY	3 cut(s)	1638, 1664, 3550
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3600
XmiI	GTMKAC	1 cut(s)	3746
XmnI	GAANNNNTTC	1 cut(s)	2100
ZrmI	AGTACT	4 cut(s)	513, 1582, 2385, 4331
Zsp2I	ATGCAT	2 cut(s)	89, 1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.