Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Forward (+)

2404632 .. 2410547

Gene Structure 5916 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026360

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3576 bp

ATGTTTTTCTTCTATTTAAATGCCGACTGGATCTTAACTCATTTTCACGGTTTGGTTGAATTTCTGAGCAGTGGAGATGTTGAGGGGTATAAGTATGAAGATGGTGACGAGATCATCAGTGACAATGGCCTTTATGCCCCTCTCAATGAGGGAAATGAAAGTTTCGAGCATGAAGGTTATCTGTTAGCCGGAGCACTTTTTGTTTCGAAAACCATTGAATCCTTGTCACAGAGGCAGTGGTACTTCAGGTGCAGGCTTATTGGTTTGAAAGTTAGGTCTTCGCTGACAGCAGCCATTTACAAAAAGCAATTAAGATTATCTAATGCTGCTAAGTTGGCACACTCAGGTGGTGAGATCATGAATTATGTTACTGTGGATGCTTATAGGATTGGAGAGTTTCCATTTTGGTTCCATAAGACTTGGACTACTAGCGTCCAGCTCTGTTTTTCTTTGGTAATTTTTTTCCGTGCAGTTGGCCTAGCTACATTCGCAGCCTTGGTGGTGATACTTTTGGGTGTGATTTGCAATGCTCCAGTTGCTAAGCTACAACATGAGTTTCAGAGTAAGCTTATGAAGGCACAAGATGAAAGGCTCAAGGCTAGTTCTGAGGCTCTAGTGAACATGAAGGTCTTAAAGTTATACGCATGGGAAACACATTTCAAGAAGGCAATAGAGAAGTTAAGGAAGGAGGAGCACAAATGGTTATCTGCAATGCTGTTAAGAAGAGCATATAGTACTTATCTCTTTTGGTCAACTCCTGTTTTGGTCTCTACTGCAACATTTGGGGCATGCTATTTTCTCAAAATTCCGTTACATGCGAGCAATGTTTTCACTTTTATCTCAACTTTGAGACTTGTTCAGGACCCCATTCAAACCATACCTGATGTTTTTGCGGTTGTCATTCAAGCCAAGGTTGCATTTGGTCGTATTGTGAAATTCCTTGAGGCACCTGAGCTGCAAACTTCAAATGTCCGGAAGTACAACATGAAGAATGTAGCTAACTCCATTGAAATTAAGTCAGCTAATTTTTCATGGGAAGAGAATTTATCGAAGTCCATACTGAGAAATATAAATTTAGAGGTTAGACCTGGTGAAAAGGTGGCTATATGTGGTGAAGTCGGCTCAGGCAAATCAAGCCTTCTAGCTGCAATTCTTGGAGAAATTCCAAATGTGCAAGGAAATATTCAAGTTTATGGGAAGATTGCCTATGTTTCTCAAACAGCATGGATCCAGTCAGGAACTATACAAGAAAATATTCTCTTTGGTTCTTGTATGGATAGTCAGAGATATCGAGAGACGCTTGAGCGATGCTCACTAGTAAAGGACCTTGAGCTGCTTCCCTATGGTGACCTTACTGAAATAGGGGAGAGAGGGGTGAATCTAAGTGGAGGTCAGAAGCAGCGGATCCAACTTGCACGCGCTCTCTATCAGGATGCAGATATATATCTCTTGGATGATCCATTCAGTGCCGTTGATGCACATACTGCCACAAACTTATTTAATGAATATGTAATGGAAGCACTTTCAGGCAAGACAGTACTACTTGTGACCCATCAAGTTGATTTCCTGCCTGCATTTGATTTCGTTTTGTTGATGATGGATGGGGAGATCGTACAAGCAGCTCCTTATCAGCATCTATTGGCTTTAAGCCAAGAATTCCAGGACCTTGTCAATGCACACAAAGAAACTGCTGGTTCCGAAAGGCTTTCAGATGTCACTTCTGCTCAAAATTCTGGAATATCATCTAGAGAGATTAAGAAGAGTTATGTTGAGAAGCCATTAAAAGAAAATAAAGTTGACCAATTGATTAAACTAGAAGAGAGAGAAACAGGTGACACAGGTTTTAAGCCATACATACTGTATCTGAAACAGAACAAAGGGTTCCTGTACTTCTCAATTGCCGTTTGTCTACACTTCACTTCCATTATGAGTCAGATTGCACAGAACTCTTGGATGGCTGCTAATGTTGATAATCCGAGTATTAGCACATTACGGTTGCTTGTGGTTTACTTATCGATTGGATTCTCTGCAACATTTATTTTTCTTTTTAGATCTCTTGCAGCAGTTGTTGGGGGTCTTGAGACATCAAAGTCTTTGTTTTCGCAACTACTAAACTCCCTTTTTCATGCACCCATGTCATTTTATGACTCTACACCTCTGGGAAGGATACTTAGTCGGGTTTCATCTGATCTGAGTATCACAGATCTTGATATTCCATTCAGCATAGTATTTGCTTGTGGAGTTACCATGAATGCCTATTGCAATCTTGGAGTATTGACTGTTGTTACCTGGCAAGTCCTGTTTGTCTCCATCCCAATGGTCTGTGTCGCAATTCAGCTACAGAAATACTATTTTTCCACTGCAAAAGAGTTGATGAGGATCAATGGAACAACTAAGTCCTTTGTAGCAAACCATCTCGCAGAGTCCGTCTCAGGAGCCATTACCATAAGAGCTTTCAATGAAGAAGAGCGCTTCTCGGCAAAGAACTTTCACCTCATTGACACAAATGCTAGTCCTTATTTCCACAATTTTTCTGCAAATGAGTGGTTAATCCAACGGTTAGGGATGATCAGCGTGGTGGTTCTTGCCTCTGCAGCACTTTGTATGGTTTCGCTTCCTCATGGAACTTTTACCTCTGGATTTATTGGGATGGCACTTTCTTATGGTCTATCATTAAATGTGTCCTTGATCGACTCAATTCAGAACCAGTGCACTATAGCAAATTATATCATTTCTGTTGAAAGACTAAATCAATACCTGCACATTCCGAGTGAAGCCCCGGAAGTAATAGAGGGAAACCGTCCACCAGCCAACTGGCCTCTTGTAGGAAAAGTGGAGATACAAAATTTGCAGATAAGATATAGGGATGACACACCACTTGTACTTCGAGGGATTAGTTGTGTTTTTGAAGGAGGACATAAGATTGGTATTGTTGGCCGGACAGGCAGTGGGAAGTCTACACTCATCAGCGCTCTATTTCGGCTGGTCGAGCCAACCGGAGGGAAGGTCATAGTCGATGGCATTGACATCTGCACTATAGGACTTCATGATCTGAGGTCAAGATTCGGAATAATACCCCAAGACCCTACTCTCTTTAATGGCACCGTCAGATACAATTTGGACCCCTTATCTCAACATTCAGACCAAGAAATATGGGAGGTTCTTGGGAAGTGTCAGCTTCGAGATGCTGTTGAGGAGAAGGAAACAGGCTTAGACTCGTTAGTTGTGGATGATGGATCAAACTGGAGCATGGGGCAAAGGCAACTGTTCTGCCTCGGGCGTGCTCTTCTAAGGAGAAGTCGGGTATTGGTGCTTGATGAAGCAACTGCATCCATCGACAATGCAACTGATACGATCCTGCAGAAGACTATAAGGACTGAGTTTGAATCTTGTACAGTAATTACAGTAGCCCACAGGATACCAACTGTGATGGATTGCACAATGGTTCTTGCCATTAGTGATGGAAAGATAGTGGAGTATGATGAGCCAATGAGGTTGATGAAGAGAGAAGGCTCGCTGTTTGGGCAGCTTGTCAAGGAGTACTGGTCTCATCTCCAGTCTGCAGAATCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1192

Amino Acids

133.08

Weight (kDa)

6.16

Isoelectric Point (pI)

32.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	81 - 289	2.6e-23	ABC transporter transmembrane region
ABC_tran	PF00005	354 - 488	5.9e-23	ABC transporter
ABC_membrane	PF00664	629 - 886	1.2e-23	ABC transporter transmembrane region
ABC_tran	PF00005	962 - 1110	3.6e-25	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2089
Acc36I	ACCTGC	1 cut(s)	2766
AccB1I	GGYRCC	2 cut(s)	946, 3101
AccI	GTMKAC	2 cut(s)	1909, 2957
AccII	CGCG	1 cut(s)	1419
AccIII	TCCGGA	1 cut(s)	972
AciI	CCGC	2 cut(s)	893, 1402
AclWI	GGATC	9 cut(s)	38, 1222, 1235, 1399, 1412, 1451, 2387, 3244, 3349
AcoI	YGGCCR	1 cut(s)	2935
AcsI	RAATTY	9 cut(s)	59, 804, 935, 1042, 1072, 1161, 1655, 1729, 2845
AcuI	CTGAAG	1 cut(s)	229
AfaI	GTAC	9 cut(s)	242, 736, 980, 1539, 1614, 1889, 2883, 3394, 3542
AfeI	AGCGCT	2 cut(s)	2471, 2971
AfiI	CCNNNNNNNGG	2 cut(s)	2825, 2999
AhlI	ACTAGT	1 cut(s)	1315
AjnI	CCWGG	3 cut(s)	1087, 1659, 2288
AleI	CACNNNNGTG	1 cut(s)	345
Alw21I	GWGCWC	4 cut(s)	196, 696, 2714, 3286
Alw26I	GTCTC	7 cut(s)	772, 844, 1289, 2075, 2311, 2434, 3552
Alw44I	GTGCAC	1 cut(s)	2710
AlwI	GGATC	9 cut(s)	38, 1222, 1235, 1399, 1412, 1451, 2387, 3244, 3349
Ama87I	CYCGRG	1 cut(s)	3275
Aor13HI	TCCGGA	1 cut(s)	972
Aor51HI	AGCGCT	2 cut(s)	2471, 2971
AoxI	GGCC	4 cut(s)	127, 475, 2816, 2935
ApaLI	GTGCAC	1 cut(s)	2710
ApoI	RAATTY	9 cut(s)	59, 804, 935, 1042, 1072, 1161, 1655, 1729, 2845
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspLEI	GCGC	3 cut(s)	1421, 2472, 2972
AspS9I	GGNCC	4 cut(s)	862, 1324, 1663, 3121
AsuC2I	CCSGG	1 cut(s)	2780
AsuHPI	GGTGA	9 cut(s)	116, 362, 514, 1103, 1124, 1358, 1387, 1844, 2483
AsuII	TTCGAA	1 cut(s)	206
AvaI	CYCGRG	1 cut(s)	3275
AvaII	GGWCC	4 cut(s)	862, 1324, 1663, 3121
BaeGI	GKGCMC	1 cut(s)	2714
BamHI	GGATCC	2 cut(s)	1227, 1404
BanI	GGYRCC	2 cut(s)	946, 3101
BbsI	GAAGAC	2 cut(s)	270, 3371
Bbv12I	GWGCWC	4 cut(s)	196, 696, 2714, 3286
BceAI	ACGGC	2 cut(s)	1454, 1886
BciT130I	CCWGG	3 cut(s)	1089, 1661, 2290
BciVI	GTATCC	2 cut(s)	2160, 3411
BclI	TGATCA	1 cut(s)	2568
BcnI	CCSGG	1 cut(s)	2780
BcoDI	GTCTC	7 cut(s)	772, 844, 1289, 2075, 2311, 2434, 3552
BcuI	ACTAGT	1 cut(s)	1315
BfaI	CTAG	9 cut(s)	429, 479, 600, 614, 1142, 1316, 1746, 1814, 2511
BfmI	CTRYAG	6 cut(s)	2339, 2592, 2715, 3036, 3359, 3561
BfoI	RGCGCY	2 cut(s)	2473, 2973
BfuAI	ACCTGC	1 cut(s)	2766
BfuI	GTATCC	2 cut(s)	2160, 3411
BglI	GCCNNNNNGGC	1 cut(s)	2943
BglII	AGATCT	2 cut(s)	2051, 2203
BlpI	GCTNAGC	1 cut(s)	540
BmcAI	AGTACT	3 cut(s)	736, 1539, 3542
Bme1390I	CCNGG	4 cut(s)	1089, 1661, 2290, 2780
Bme18I	GGWCC	4 cut(s)	862, 1324, 1663, 3121
BmeT110I	CYCGRG	1 cut(s)	3275
BmgT120I	GGNCC	4 cut(s)	862, 1324, 1663, 3121
BmrFI	CCNGG	4 cut(s)	1089, 1661, 2290, 2780
BmsI	GCATC	7 cut(s)	367, 1298, 1423, 1465, 1642, 3175, 3338
BpiI	GAAGAC	2 cut(s)	270, 3371
BplI	GAGNNNNNCTC	6 cut(s)	1295, 1327, 2414, 2446, 2459, 2491
BpmI	CTGGAG	3 cut(s)	516, 3265, 3539
Bpu10I	CCTNAGC	2 cut(s)	951, 1123
Bpu1102I	GCTNAGC	1 cut(s)	540
Bpu14I	TTCGAA	1 cut(s)	206
BpuEI	CTTGAG	5 cut(s)	578, 962, 1322, 1349, 2099
BpuMI	CCSGG	1 cut(s)	2780
Bsa29I	ATCGAT	1 cut(s)	2015
BsaBI	GATNNNNATC	2 cut(s)	1443, 2378
BsaI	GGTCTC	2 cut(s)	772, 3552
BsaJI	CCNNGG	4 cut(s)	495, 909, 2778, 3274
BsaWI	WCCGGW	2 cut(s)	972, 2996
BsaXI	ACNNNNNCTCC	4 cut(s)	2991, 3021, 3530, 3560
Bsc4I	CCNNNNNNNGG	2 cut(s)	2825, 2999
Bse1I	ACTGG	8 cut(s)	32, 533, 1231, 2707, 2819, 3248, 3548, 3556
Bse3DI	GCAATG	3 cut(s)	532, 717, 829
Bse8I	GATNNNNATC	2 cut(s)	1443, 2378
BseAI	TCCGGA	1 cut(s)	972
BseBI	CCWGG	3 cut(s)	1089, 1661, 2290
BseCI	ATCGAT	1 cut(s)	2015
BseDI	CCNNGG	4 cut(s)	495, 909, 2778, 3274
BseJI	GATNNNNATC	2 cut(s)	1443, 2378
BseLI	CCNNNNNNNGG	2 cut(s)	2825, 2999
BseMI	GCAATG	3 cut(s)	532, 717, 829
BseNI	ACTGG	8 cut(s)	32, 533, 1231, 2707, 2819, 3248, 3548, 3556
BseRI	GAGGAG	2 cut(s)	704, 3209
BseSI	GKGCMC	1 cut(s)	2714
BsgI	GTGCAG	4 cut(s)	271, 489, 2744, 3016
Bsh1236I	CGCG	1 cut(s)	1419
BshFI	GGCC	4 cut(s)	129, 477, 2818, 2937
BshNI	GGYRCC	2 cut(s)	946, 3101
BshVI	ATCGAT	1 cut(s)	2015
BsiHKAI	GWGCWC	4 cut(s)	196, 696, 2714, 3286
BsiHKCI	CYCGRG	1 cut(s)	3275
BsiSI	CCGG	5 cut(s)	189, 973, 2780, 2938, 2997
BslI	CCNNNNNNNGG	2 cut(s)	2825, 2999
BsmAI	GTCTC	7 cut(s)	772, 844, 1289, 2075, 2311, 2434, 3552
BsmBI	CGTCTC	2 cut(s)	1289, 2434
BsmI	GAATGC	1 cut(s)	2257
BsnI	GGCC	4 cut(s)	129, 477, 2818, 2937
Bso31I	GGTCTC	2 cut(s)	772, 3552
BsoBI	CYCGRG	1 cut(s)	3275
Bsp119I	TTCGAA	1 cut(s)	206
Bsp1286I	GDGCHC	4 cut(s)	196, 696, 2714, 3286
Bsp13I	TCCGGA	1 cut(s)	972
Bsp1407I	TGTACA	1 cut(s)	3392
Bsp1720I	GCTNAGC	1 cut(s)	540
BspACI	CCGC	2 cut(s)	893, 1402
BspANI	GGCC	4 cut(s)	129, 477, 2818, 2937
BspDI	ATCGAT	1 cut(s)	2015
BspEI	TCCGGA	1 cut(s)	972
BspFNI	CGCG	1 cut(s)	1419
BspHI	TCATGA	2 cut(s)	357, 3046
BspMAI	CTGCAG	3 cut(s)	2596, 3363, 3565
BspMI	ACCTGC	1 cut(s)	2766
BspPI	GGATC	9 cut(s)	38, 1222, 1235, 1399, 1412, 1451, 2387, 3244, 3349
BspQI	GCTCTTC	3 cut(s)	718, 2460, 3291
BspT104I	TTCGAA	1 cut(s)	206
BspT107I	GGYRCC	2 cut(s)	946, 3101
BspTNI	GGTCTC	2 cut(s)	772, 3552
BsrDI	GCAATG	3 cut(s)	532, 717, 829
BsrGI	TGTACA	1 cut(s)	3392
BsrI	ACTGG	8 cut(s)	32, 533, 1231, 2707, 2819, 3248, 3548, 3556
BssECI	CCNNGG	4 cut(s)	495, 909, 2778, 3274
BssT1I	CCWWGG	2 cut(s)	495, 909
Bst2UI	CCWGG	3 cut(s)	1089, 1661, 2290
Bst6I	CTCTTC	7 cut(s)	718, 1032, 1754, 1812, 2460, 3291, 3497
BstAPI	GCANNNNNTGC	1 cut(s)	1484
BstAUI	TGTACA	1 cut(s)	3392
BstBI	TTCGAA	1 cut(s)	206
BstC8I	GCNNGC	7 cut(s)	254, 790, 820, 1417, 1572, 3282, 3515
BstEII	GGTNACC	1 cut(s)	1346
BstENI	CCTNNNNNAGG	1 cut(s)	2823
BstFNI	CGCG	1 cut(s)	1419
BstH2I	RGCGCY	2 cut(s)	2473, 2973
BstHHI	GCGC	3 cut(s)	1421, 2472, 2972
BstMAI	GTCTC	7 cut(s)	772, 844, 1289, 2075, 2311, 2434, 3552
BstNI	CCWGG	3 cut(s)	1089, 1661, 2290
BstNSI	RCATGY	2 cut(s)	792, 818
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	4 cut(s)	1087, 1659, 2288, 2778
BstSFI	CTRYAG	6 cut(s)	2339, 2592, 2715, 3036, 3359, 3561
BstSLI	GKGCMC	1 cut(s)	2714
BstUI	CGCG	1 cut(s)	1419
BstV2I	GAAGAC	2 cut(s)	270, 3371
BstX2I	RGATCY	5 cut(s)	30, 1227, 1404, 2051, 2203
BstXI	CCANNNNNNTGG	2 cut(s)	2317, 2814
BstYI	RGATCY	5 cut(s)	30, 1227, 1404, 2051, 2203
Bsu15I	ATCGAT	1 cut(s)	2015
BsuI	GTATCC	2 cut(s)	2160, 3411
BsuRI	GGCC	4 cut(s)	129, 477, 2818, 2937
BsuTUI	ATCGAT	1 cut(s)	2015
BtgZI	GCGATG	1 cut(s)	1321
BtsI	GCAGTG	4 cut(s)	76, 242, 2358, 2953
BtsIMutI	CAGTG	7 cut(s)	76, 124, 242, 1471, 2358, 2714, 2953
BveI	ACCTGC	1 cut(s)	2766
Cac8I	GCNNGC	7 cut(s)	254, 790, 820, 1417, 1572, 3282, 3515
CciI	TCATGA	2 cut(s)	357, 3046
CfoI	GCGC	3 cut(s)	1421, 2472, 2972
Cfr13I	GGNCC	4 cut(s)	862, 1324, 1663, 3121
ClaI	ATCGAT	1 cut(s)	2015
CseI	GACGC	2 cut(s)	421, 1306
CsiI	ACCWGGT	1 cut(s)	1087
Csp6I	GTAC	9 cut(s)	241, 735, 979, 1538, 1613, 1888, 2882, 3393, 3541
CviQI	GTAC	9 cut(s)	241, 735, 979, 1538, 1613, 1888, 2882, 3393, 3541
DraI	TTTAAA	1 cut(s)	18
DrdI	GACNNNNNNGTC	1 cut(s)	2089
DseDI	GACNNNNNNGTC	1 cut(s)	2089
EaeI	YGGCCR	1 cut(s)	2935
Eam1104I	CTCTTC	7 cut(s)	718, 1032, 1754, 1812, 2460, 3291, 3497
EarI	CTCTTC	7 cut(s)	718, 1032, 1754, 1812, 2460, 3291, 3497
Eco130I	CCWWGG	2 cut(s)	495, 909
Eco31I	GGTCTC	2 cut(s)	772, 3552
Eco32I	GATATC	1 cut(s)	1289
Eco47I	GGWCC	4 cut(s)	862, 1324, 1663, 3121
Eco47III	AGCGCT	2 cut(s)	2471, 2971
Eco57I	CTGAAG	1 cut(s)	229
Eco88I	CYCGRG	1 cut(s)	3275
Eco91I	GGTNACC	1 cut(s)	1346
EcoNI	CCTNNNNNAGG	1 cut(s)	2823
EcoO109I	RGGNCCY	3 cut(s)	862, 1324, 1663
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	1 cut(s)	1655
EcoRII	CCWGG	3 cut(s)	1087, 1659, 2288
EcoRV	GATATC	1 cut(s)	1289
EcoT14I	CCWWGG	2 cut(s)	495, 909
ErhI	CCWWGG	2 cut(s)	495, 909
Esp3I	CGTCTC	2 cut(s)	1289, 2434
FbaI	TGATCA	1 cut(s)	2568
FblI	GTMKAC	2 cut(s)	1909, 2957
FspBI	CTAG	9 cut(s)	429, 479, 600, 614, 1142, 1316, 1746, 1814, 2511
GlaI	GCGC	3 cut(s)	1420, 2471, 2971
GsuI	CTGGAG	3 cut(s)	516, 3265, 3539
HaeII	RGCGCY	2 cut(s)	2473, 2973
HaeIII	GGCC	4 cut(s)	129, 477, 2818, 2937
HapII	CCGG	5 cut(s)	189, 973, 2780, 2938, 2997
HgaI	GACGC	2 cut(s)	421, 1306
HhaI	GCGC	3 cut(s)	1421, 2472, 2972
Hin6I	GCGC	3 cut(s)	1419, 2470, 2970
HinP1I	GCGC	3 cut(s)	1419, 2470, 2970
HincII	GTYRAC	2 cut(s)	753, 1798
HindII	GTYRAC	2 cut(s)	753, 1798
HindIII	AAGCTT	1 cut(s)	566
HpaII	CCGG	5 cut(s)	189, 973, 2780, 2938, 2997
HphI	GGTGA	9 cut(s)	116, 362, 514, 1103, 1124, 1358, 1387, 1844, 2483
Hpy166II	GTNNAC	8 cut(s)	619, 753, 1798, 1910, 2008, 2712, 2804, 2958
Hpy8I	GTNNAC	8 cut(s)	619, 753, 1798, 1910, 2008, 2712, 2804, 2958
HspAI	GCGC	3 cut(s)	1419, 2470, 2970
Kpn2I	TCCGGA	1 cut(s)	972
Ksp22I	TGATCA	1 cut(s)	2568
LguI	GCTCTTC	3 cut(s)	718, 2460, 3291
LmnI	GCTCC	6 cut(s)	191, 535, 691, 1627, 2435, 3246
LweI	GCATC	7 cut(s)	367, 1298, 1423, 1465, 1642, 3175, 3338
MabI	ACCWGGT	1 cut(s)	1087
MaeI	CTAG	9 cut(s)	429, 479, 600, 614, 1142, 1316, 1746, 1814, 2511
MfeI	CAATTG	2 cut(s)	1802, 1896
MflI	RGATCY	5 cut(s)	30, 1227, 1404, 2051, 2203
MhlI	GDGCHC	4 cut(s)	196, 696, 2714, 3286
MlyI	GAGTC	5 cut(s)	1939, 2141, 2432, 2687, 3209
MmeI	TCCRAC	2 cut(s)	1432, 2578
MroI	TCCGGA	1 cut(s)	972
MroXI	GAANNNNTTC	1 cut(s)	1254
MslI	CAYNNNNRTG	2 cut(s)	345, 2315
MspA1I	CMGCKG	1 cut(s)	1402
MspI	CCGG	5 cut(s)	189, 973, 2780, 2938, 2997
MspR9I	CCNGG	4 cut(s)	1089, 1661, 2290, 2780
MunI	CAATTG	2 cut(s)	1802, 1896
Mva1269I	GAATGC	1 cut(s)	2257
MvaI	CCWGG	3 cut(s)	1089, 1661, 2290
MvnI	CGCG	1 cut(s)	1419
NciI	CCSGG	1 cut(s)	2780
NmeAIII	GCCGAG	1 cut(s)	2456
NmuCI	GTSAC	7 cut(s)	104, 119, 225, 1346, 1546, 1714, 1832
NspI	RCATGY	2 cut(s)	792, 818
NspV	TTCGAA	1 cut(s)	206
OliI	CACNNNNGTG	1 cut(s)	345
PaeI	GCATGC	1 cut(s)	792
PagI	TCATGA	2 cut(s)	357, 3046
PciSI	GCTCTTC	3 cut(s)	718, 2460, 3291
PcsI	WCGNNNNNNNCGW	1 cut(s)	2424
PctI	GAATGC	1 cut(s)	2257
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	6 cut(s)	218, 1378, 2022, 3063, 3386, 3566
PflFI	GACNNNGTC	1 cut(s)	1667
PfoI	TCCNGGA	1 cut(s)	1659
PleI	GAGTC	5 cut(s)	1938, 2141, 2431, 2687, 3209
PpsI	GAGTC	5 cut(s)	1938, 2141, 2431, 2687, 3209
PpuMI	RGGWCCY	3 cut(s)	862, 1324, 1663
Psp5II	RGGWCCY	3 cut(s)	862, 1324, 1663
Psp6I	CCWGG	3 cut(s)	1087, 1659, 2288
PspEI	GGTNACC	1 cut(s)	1346
PspGI	CCWGG	3 cut(s)	1087, 1659, 2288
PspPI	GGNCC	4 cut(s)	862, 1324, 1663, 3121
PspPPI	RGGWCCY	3 cut(s)	862, 1324, 1663
PstI	CTGCAG	3 cut(s)	2596, 3363, 3565
PsuI	RGATCY	5 cut(s)	30, 1227, 1404, 2051, 2203
PsyI	GACNNNGTC	1 cut(s)	1667
RsaI	GTAC	9 cut(s)	242, 736, 980, 1539, 1614, 1889, 2883, 3394, 3542
RsaNI	GTAC	9 cut(s)	241, 735, 979, 1538, 1613, 1888, 2882, 3393, 3541
RseI	CAYNNNNRTG	2 cut(s)	345, 2315
SapI	GCTCTTC	3 cut(s)	718, 2460, 3291
Sau96I	GGNCC	4 cut(s)	862, 1324, 1663, 3121
ScaI	AGTACT	3 cut(s)	736, 1539, 3542
SchI	GAGTC	5 cut(s)	1939, 2141, 2432, 2687, 3209
ScrFI	CCNGG	4 cut(s)	1089, 1661, 2290, 2780
SduI	GDGCHC	4 cut(s)	196, 696, 2714, 3286
SexAI	ACCWGGT	1 cut(s)	1087
SfaNI	GCATC	7 cut(s)	367, 1298, 1423, 1465, 1642, 3175, 3338
SfcI	CTRYAG	6 cut(s)	2339, 2592, 2715, 3036, 3359, 3561
SfuI	TTCGAA	1 cut(s)	206
SinI	GGWCC	4 cut(s)	862, 1324, 1663, 3121
SmiI	ATTTAAAT	1 cut(s)	18
SmiMI	CAYNNNNRTG	2 cut(s)	345, 2315
SmlI	CTYRAG	5 cut(s)	593, 941, 1301, 1328, 2078
SmoI	CTYRAG	5 cut(s)	593, 941, 1301, 1328, 2078
SpeI	ACTAGT	1 cut(s)	1315
SphI	GCATGC	1 cut(s)	792
SsiI	CCGC	2 cut(s)	893, 1402
SspI	AATATT	2 cut(s)	1183, 1255
SspMI	CTAG	9 cut(s)	429, 479, 600, 614, 1142, 1316, 1746, 1814, 2511
StyD4I	CCNGG	4 cut(s)	1087, 1659, 2288, 2778
StyI	CCWWGG	2 cut(s)	495, 909
SwaI	ATTTAAAT	1 cut(s)	18
TatI	WGTACW	7 cut(s)	734, 978, 1537, 1887, 2881, 3392, 3540
TfiI	GAWTC	6 cut(s)	218, 1378, 2022, 3063, 3386, 3566
TscAI	CASTG	7 cut(s)	76, 124, 242, 1471, 2365, 2714, 2953
TseFI	GTSAC	7 cut(s)	104, 119, 225, 1346, 1546, 1714, 1832
Tsp45I	GTSAC	7 cut(s)	104, 119, 225, 1346, 1546, 1714, 1832
TspGWI	ACGGA	3 cut(s)	455, 798, 2416
TspRI	CASTG	7 cut(s)	76, 124, 242, 1471, 2365, 2714, 2953
Tth111I	GACNNNGTC	1 cut(s)	1667
VneI	GTGCAC	1 cut(s)	2710
VpaK11BI	GGWCC	4 cut(s)	862, 1324, 1663, 3121
XagI	CCTNNNNNAGG	1 cut(s)	2823
XapI	RAATTY	9 cut(s)	59, 804, 935, 1042, 1072, 1161, 1655, 1729, 2845
XbaI	TCTAGA	1 cut(s)	1745
XceI	RCATGY	2 cut(s)	792, 818
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2811
XmiI	GTMKAC	2 cut(s)	1909, 2957
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	9 cut(s)	429, 479, 600, 614, 1142, 1316, 1746, 1814, 2511
ZrmI	AGTACT	3 cut(s)	736, 1539, 3542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.