Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002763

Physical Location & Seq

Genomic Coordinates Forward (+)

17415330 .. 17418310

Gene Structure 2981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g13900.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGGCGGCACCAAGATGCAGGTTGCACTTAACAGCTCTTCTTTCCTTGGTTGTTTCCGTTGCATTAGCCCACACAGAAAGCCAAGGTGGTGGTGATCATGGTGGGAAGCATCGGCTTCAAACAGGGCCAGTAACATATGATAGGAGGTCACTTCTTATCAATGGCAAACGGGAGCTTCTATTTTCGGGGTCTATCCATTATACACGAAGCACGCCAGAAATGTGGCCTGATCTTCTCCGAAAGGCCAAACATGGAGGCTTGAATGTGATCCAAACTTATGTGTTTTGGAACGTTCACGAGCCTGTGAAAGGTCACTACAATTTTTCAGGAAACTATGATTTGGTGAGGTTCATTAAGCTTGTTCAAGAGCATGGAATGTATGTCACCATTCGAGTTGGGCCATTCATTCAAGCCGAATGGAACCATGGAGGACTTCCATATTGGCTGAGAGAGGTCCCCGACCTCATATTTCGTACTGATAATGCACCATACAAGTACTATATGAAGAAGTATGTGACCATGATTGTGAACAAGTTGAAAGAAGCAAAACTGTTTTCTCCTCAAGGAGGCCCAATCATATTGGCACAGATTGAAAACGAGTACAATCATATCCAGCTTGCATATGAAGAGAATGGAAGCAATTATGTTAGATGGGCAGCAAAGATGGCCGTAAAGCAAAATGTTGGAGTACCATGGATCATGTGCAAGCAGACCGATGCTCCTGATCCGGCGATAAATACTTGTAACGGAAGGCATTGTGGTGATAGTTTCTCTGGAGCAAATAAGCCATACAAGCCTGCTCTATGGACTGAAAACTGGACAGGTCAGTACCGAGTATTTGGTGATCCTGCTTCACAAAGACCTGCAGAAGATATTGCATTTTCGGTTGCCCGCTTTTTCTCAAAGAATGGATCTCTAGCCAACTACTACATGTACCATGGTGGGACTAATTTTGGAAGAACAAGTGCGATTTTCACAACAACTCGCTACTATGACGAAGCACCTCTTGATGAATATGGTTTGCCAAGGGACCCAAAGTGGAGTCACCTCAAGGACTTGCACAAGGCTTTGAGACTATGCAGGAAGCCTTTGCTTTGGGGGGTTCCAGGTGTCCAAAACTTAGGGAAAAACATCGAGGCTCGTTTCTATGAGTTGAAGGGCAACTCCTCAATCTGTGCTGCTTTCTTGGCCAACAACAATTCAAGAAGTGAAGCAATTGTTAATTGGAGAGGACAAGACTATTACCTTCCACCCCATTCCATTAGCATCCTCCCTGACTGCAAGACTGTGGTCTACAATACTCAAACCATCGTATCGCAGCATAATGCAAGGAGCTTTGTCGGATCAAATTTGGCTAATAAAATGAGATGGATGGAGTCTCCGGAACCCATTCCAAGCACCAAGGAAATTCCAATCAATAATAGGACACCATTGGAGCTCTACGGCTTGCTCAAAGACAACTCAGACTATGCGTGGTACACAACCAGCCTTGAGTTGAATTCTATGGACATGTCCATGAAGAAAAGCATTCAACCAGTTCTACGAGTAGGAAGTCTCGGTCACGCAATGCTGGTGTTTGTCAATGGTGAGTATGTTGGTTCTGGACATGGGAGCCATGACGAGAAGAGCTTTGTCTTTGAGAAAGTTGTGTCCTTCAAGGCCGGGGTCAACCAAATAGCTTTGCTTGCCATGACAGTTGGTCTTCCAGATAGCGGAGCGTACATGGAGCATAGATATGCAGGGCCTAAAGACATAGTAGTTCTAGGATTGAACACTGGAACTCTTGATCTCACACAAAATGGCTGGGGGCATCAAGTTGGCTTAAATGGAGAGAAGCTACGAGCCTTCACAAAAGAGGGATCAAAACAGGTCCAATGGGGAGAAACAAATGGACCAAAAAAGGCTCTCACATGGTACAAGACATATTTTGATGCTCCTGAAGGGAATGATCCTGTCGCGATCCGAATGACTGGTATGGGAAAAGGAATGATCTGGGTGAATGGTGAGAGCATCGGTCGACACTGGATCTCCTTCCTCTCTCCTCTTGGGCAGCCTACTCAATCTGAGTACCACATCCCAAGATCATTCATCAAGCCTAGGAAAAACTTGCTTGTTGTTTTGGAAGAGGAGCTAGCCAAGCCTAGTAGCATTGACATTGTGACTGTCAACAGAGATACCATTTGCAGCTTCATTACTGAGTATCATCCTCCAAATGTGAAGTCATGGGCTAGACAAAACAGCGTCTTCCGACCTGTGTTAGATGTTGTAAGAACATCCGCTGAGTTGAAGTGTCCGAATTACAAAAAGGTTGTAGCTGTTGAGTTTGCAAGCTTTGGTGATCCTACTGGTTCATGTGGAAGCTACACCTTGGGCAAATGCAACTCCCCTGTATCAAAGGAGGTAGTTGAACAACACTGCTTGGGCAACACGAGCTGCGTAGTTCCGATCGACCGCAACGTTTACTTCAAGAACAATGATGAATGCCCTGATATCAAGAAGACTCTTGCTATTCAAGTGAAGTGTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

843

Amino Acids

94.53

Weight (kDa)

9.04

Isoelectric Point (pI)

36.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	50 - 356	2.3e-117	Glycosyl hydrolases family 35
Glyco_hydro_42	PF02449	72 - 218	2.6e-07	Beta-galactosidase
GHD	PF17834	381 - 436	2.1e-20	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	636 - 702	4.7e-24	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	762 - 841	6.5e-16	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16730 AT4G35010
fragaria_vesca	FvH4_2g01270 FvH4_4g13900
malus_domestica	MD04G1010100.v1.1 MD05G1121000.v1.1 MD10G1095200.v1.1 MD13G1284600.v1.1
prunus_persica	Prupe.1G009200_v2.0.a1 Prupe.1G009300_v2.0.a1 Prupe.8G164800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0475241 RchiOBHm_Chr4g0415021 RchiOBHm_Chr6g0251931
rosa_laevigata	RLG00000008102 RLG00000015418 RLG00000023857
rosa_multiflora	Rmu_sc0003611.1_g000013 Rmu_sc0008157.1_g000007 Rmu_ssc0000303.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358760 Rroxscaffold_6G00406440
rosa_rugosa	Rorug03G0147300 Rorug04G0131700 Rorug05G0505100 Rorug05G0505200 Rorug05G0505200
rosa_samantha	Rh3AG197300 Rh4AG191000 Rh4BG189100 Rh4CG202000 Rh4DG189500 Rh6AG016400 Rh6BG014400 Rh6CG011300 Rh6DG012600
rosa_wichuraiana	Rw3G017940 Rw4G016250 Rw6G001570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	9, 871
AccB1I	GGYRCC	1 cut(s)	7
AccI	GTMKAC	2 cut(s)	1293, 2017
AccII	CGCG	1 cut(s)	1958
AccIII	TCCGGA	1 cut(s)	1381
AciI	CCGC	5 cut(s)	5, 892, 1713, 2277, 2452
AclI	AACGTT	2 cut(s)	291, 2457
AcoI	YGGCCR	2 cut(s)	666, 1188
AcsI	RAATTY	3 cut(s)	1348, 1407, 1498
AcuI	CTGAAG	1 cut(s)	1959
AfiI	CCNNNNNNNGG	3 cut(s)	308, 566, 1712
AflIII	ACRYGT	2 cut(s)	930, 1509
AhdI	GACNNNNNGTC	1 cut(s)	1698
AjnI	CCWGG	1 cut(s)	1105
Alw21I	GWGCWC	1 cut(s)	1440
Alw26I	GTCTC	3 cut(s)	1066, 1383, 1559
Aor13HI	TCCGGA	1 cut(s)	1381
AoxI	GGCC	9 cut(s)	125, 224, 243, 398, 568, 666, 1188, 1659, 1742
ApeKI	GCWGC	6 cut(s)	656, 1178, 1318, 2050, 2184, 2433
ApoI	RAATTY	3 cut(s)	1348, 1407, 1498
ArsI	GACNNNNNNTTYG	2 cut(s)	2204, 2236
Asp700I	GAANNNNTTC	1 cut(s)	1389
AspA2I	CCTAGG	1 cut(s)	2096
AspS9I	GGNCC	8 cut(s)	125, 398, 454, 569, 1030, 1742, 1870, 1892
AsuC2I	CCSGG	1 cut(s)	1663
AsuNHI	GCTAGC	1 cut(s)	2131
AvaII	GGWCC	4 cut(s)	454, 1030, 1870, 1892
AvrII	CCTAGG	1 cut(s)	2096
BaeI	ACNNNNGTAYC	2 cut(s)	1296, 1329
BalI	TGGCCA	1 cut(s)	1190
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	1 cut(s)	1440
BauI	CACGAG	2 cut(s)	296, 2428
BbsI	GAAGAC	3 cut(s)	1694, 2236, 2504
Bbv12I	GWGCWC	1 cut(s)	1440
BbvI	GCAGC	6 cut(s)	668, 1165, 1330, 2062, 2196, 2420
BccI	CCATC	5 cut(s)	645, 658, 1316, 1362, 1366
BceAI	ACGGC	2 cut(s)	653, 1459
BciT130I	CCWGG	1 cut(s)	1107
BclI	TGATCA	1 cut(s)	94
BcnI	CCSGG	1 cut(s)	1663
BcoDI	GTCTC	3 cut(s)	1066, 1383, 1559
BfaI	CTAG	6 cut(s)	917, 1763, 2097, 2132, 2142, 2229
BfmI	CTRYAG	1 cut(s)	864
BfuAI	ACCTGC	2 cut(s)	9, 871
BisI	GCNGC	7 cut(s)	6, 657, 1179, 1319, 2051, 2185, 2434
BlnI	CCTAGG	1 cut(s)	2096
BlsI	GCNGC	7 cut(s)	7, 658, 1180, 1320, 2052, 2186, 2435
BmcAI	AGTACT	1 cut(s)	497
Bme1390I	CCNGG	2 cut(s)	1107, 1663
Bme18I	GGWCC	4 cut(s)	454, 1030, 1870, 1892
BmeRI	GACNNNNNGTC	1 cut(s)	1698
BmgT120I	GGNCC	8 cut(s)	125, 398, 454, 569, 1030, 1742, 1870, 1892
BmiI	GGNNCC	8 cut(s)	9, 422, 456, 1031, 1032, 1104, 1386, 1613
BmrFI	CCNGG	2 cut(s)	1107, 1663
BmsI	GCATC	7 cut(s)	5, 118, 706, 1275, 1819, 1921, 2019
BmtI	GCTAGC	1 cut(s)	2135
BoxI	GACNNNNGTC	1 cut(s)	1289
BpiI	GAAGAC	3 cut(s)	1694, 2236, 2504
BpmI	CTGGAG	1 cut(s)	795
BpuEI	CTTGAG	3 cut(s)	546, 1034, 1511
BpuMI	CCSGG	1 cut(s)	1663
BsaWI	WCCGGW	1 cut(s)	1381
BsaXI	ACNNNNNCTCC	4 cut(s)	703, 733, 2012, 2042
Bsc4I	CCNNNNNNNGG	3 cut(s)	308, 566, 1712
Bse1I	ACTGG	7 cut(s)	128, 821, 1535, 1780, 1975, 2027, 2350
Bse3DI	GCAATG	1 cut(s)	1572
BseAI	TCCGGA	1 cut(s)	1381
BseBI	CCWGG	1 cut(s)	1107
BseGI	GGATG	5 cut(s)	1266, 1377, 2073, 2203, 2273
BseLI	CCNNNNNNNGG	3 cut(s)	308, 566, 1712
BseMI	GCAATG	1 cut(s)	1572
BseMII	CTCAG	5 cut(s)	437, 1476, 2055, 2187, 2271
BseNI	ACTGG	7 cut(s)	128, 821, 1535, 1780, 1975, 2027, 2350
BseRI	GAGGAG	4 cut(s)	549, 1156, 2031, 2141
BseXI	GCAGC	6 cut(s)	668, 1165, 1330, 2062, 2196, 2420
BseYI	CCCAGC	1 cut(s)	1803
Bsh1236I	CGCG	1 cut(s)	1958
Bsh1285I	CGRYCG	3 cut(s)	2017, 2448, 2452
BshFI	GGCC	9 cut(s)	127, 226, 245, 400, 570, 668, 1190, 1661, 1744
BshNI	GGYRCC	1 cut(s)	7
BsiEI	CGRYCG	3 cut(s)	2017, 2448, 2452
BsiHKAI	GWGCWC	1 cut(s)	1440
BsiSI	CCGG	3 cut(s)	728, 1382, 1662
BslFI	GGGAC	3 cut(s)	440, 958, 1043
BslI	CCNNNNNNNGG	3 cut(s)	308, 566, 1712
BsmAI	GTCTC	3 cut(s)	1066, 1383, 1559
BsmFI	GGGAC	3 cut(s)	440, 958, 1043
BsmI	GAATGC	2 cut(s)	1527, 2486
BsnI	GGCC	9 cut(s)	127, 226, 245, 400, 570, 668, 1190, 1661, 1744
Bsp1286I	GDGCHC	1 cut(s)	1440
Bsp13I	TCCGGA	1 cut(s)	1381
Bsp19I	CCATGG	3 cut(s)	424, 692, 937
Bsp68I	TCGCGA	1 cut(s)	1958
BspACI	CCGC	5 cut(s)	5, 892, 1713, 2277, 2452
BspANI	GGCC	9 cut(s)	127, 226, 245, 400, 570, 668, 1190, 1661, 1744
BspCNI	CTCAG	5 cut(s)	438, 1475, 2056, 2188, 2272
BspEI	TCCGGA	1 cut(s)	1381
BspFNI	CGCG	1 cut(s)	1958
BspLI	GGNNCC	8 cut(s)	9, 422, 456, 1031, 1032, 1104, 1386, 1613
BspMAI	CTGCAG	1 cut(s)	868
BspMI	ACCTGC	2 cut(s)	9, 871
BspOI	GCTAGC	1 cut(s)	2135
BspQI	GCTCTTC	2 cut(s)	42, 1619
BspT107I	GGYRCC	1 cut(s)	7
BsrDI	GCAATG	1 cut(s)	1572
BsrI	ACTGG	7 cut(s)	128, 821, 1535, 1780, 1975, 2027, 2350
BssSI	CACGAG	2 cut(s)	296, 2428
BssT1I	CCWWGG	9 cut(s)	45, 82, 424, 692, 937, 1025, 1401, 2096, 2367
Bst2BI	CACGAG	2 cut(s)	296, 2428
Bst2UI	CCWGG	1 cut(s)	1107
Bst4CI	ACNGT	4 cut(s)	552, 1288, 1696, 2164
Bst6I	CTCTTC	4 cut(s)	42, 621, 1619, 2118
BstC8I	GCNNGC	9 cut(s)	212, 618, 707, 798, 892, 1448, 1686, 2133, 2329
BstDEI	CTNAG	7 cut(s)	446, 1120, 1462, 2064, 2196, 2280, 2526
BstDSI	CCRYGG	3 cut(s)	424, 692, 937
BstENI	CCTNNNNNAGG	2 cut(s)	306, 564
BstF5I	GGATG	5 cut(s)	1266, 1377, 2073, 2203, 2273
BstFNI	CGCG	1 cut(s)	1958
BstMAI	GTCTC	3 cut(s)	1066, 1383, 1559
BstMCI	CGRYCG	3 cut(s)	2017, 2448, 2452
BstMWI	GCNNNNNNNGC	6 cut(s)	665, 793, 1187, 1685, 2137, 2430
BstNI	CCWGG	1 cut(s)	1107
BstNSI	RCATGY	2 cut(s)	934, 1513
BstPAI	GACNNNNGTC	1 cut(s)	1289
BstSCI	CCNGG	2 cut(s)	1105, 1661
BstSFI	CTRYAG	1 cut(s)	864
BstUI	CGCG	1 cut(s)	1958
BstV1I	GCAGC	6 cut(s)	668, 1165, 1330, 2062, 2196, 2420
BstV2I	GAAGAC	3 cut(s)	1694, 2236, 2504
BstX2I	RGATCY	2 cut(s)	911, 2025
BstXI	CCANNNNNNTGG	2 cut(s)	89, 222
BstYI	RGATCY	2 cut(s)	911, 2025
BsuRI	GGCC	9 cut(s)	127, 226, 245, 400, 570, 668, 1190, 1661, 1744
BtgI	CCRYGG	3 cut(s)	424, 692, 937
BtsCI	GGATG	5 cut(s)	1266, 1377, 2073, 2203, 2273
BtsI	GCAGTG	1 cut(s)	2413
BtsIMutI	CAGTG	3 cut(s)	1773, 2020, 2413
BtuMI	TCGCGA	1 cut(s)	1958
BveI	ACCTGC	2 cut(s)	9, 871
Cac8I	GCNNGC	9 cut(s)	212, 618, 707, 798, 892, 1448, 1686, 2133, 2329
Cfr13I	GGNCC	8 cut(s)	125, 398, 454, 569, 1030, 1742, 1870, 1892
CseI	GACGC	1 cut(s)	2230
DdeI	CTNAG	7 cut(s)	446, 1120, 1462, 2064, 2196, 2280, 2526
DriI	GACNNNNNGTC	1 cut(s)	1698
EaeI	YGGCCR	2 cut(s)	666, 1188
Eam1104I	CTCTTC	4 cut(s)	42, 621, 1619, 2118
Eam1105I	GACNNNNNGTC	1 cut(s)	1698
EarI	CTCTTC	4 cut(s)	42, 621, 1619, 2118
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	9 cut(s)	45, 82, 424, 692, 937, 1025, 1401, 2096, 2367
Eco24I	GRGCYC	1 cut(s)	1440
Eco32I	GATATC	1 cut(s)	2491
Eco47I	GGWCC	4 cut(s)	454, 1030, 1870, 1892
Eco53kI	GAGCTC	1 cut(s)	1438
Eco57I	CTGAAG	1 cut(s)	1959
EcoICRI	GAGCTC	1 cut(s)	1438
EcoNI	CCTNNNNNAGG	2 cut(s)	306, 564
EcoO109I	RGGNCCY	3 cut(s)	454, 1030, 1742
EcoRI	GAATTC	1 cut(s)	1498
EcoRII	CCWGG	1 cut(s)	1105
EcoRV	GATATC	1 cut(s)	2491
EcoT14I	CCWWGG	9 cut(s)	45, 82, 424, 692, 937, 1025, 1401, 2096, 2367
EcoT38I	GRGCYC	1 cut(s)	1440
ErhI	CCWWGG	9 cut(s)	45, 82, 424, 692, 937, 1025, 1401, 2096, 2367
FalI	AAGNNNNNCTT	2 cut(s)	990, 1022
FaqI	GGGAC	3 cut(s)	440, 958, 1043
FauI	CCCGC	1 cut(s)	899
FauNDI	CATATG	2 cut(s)	136, 622
FbaI	TGATCA	1 cut(s)	94
FblI	GTMKAC	2 cut(s)	1293, 2017
Fnu4HI	GCNGC	7 cut(s)	6, 657, 1179, 1319, 2051, 2185, 2434
FokI	GGATG	5 cut(s)	1253, 1384, 2060, 2190, 2260
FriOI	GRGCYC	1 cut(s)	1440
Fsp4HI	GCNGC	7 cut(s)	6, 657, 1179, 1319, 2051, 2185, 2434
FspBI	CTAG	6 cut(s)	917, 1763, 2097, 2132, 2142, 2229
GluI	GCNGC	7 cut(s)	6, 657, 1179, 1319, 2051, 2185, 2434
GsaI	CCCAGC	1 cut(s)	1807
GsuI	CTGGAG	1 cut(s)	795
HaeIII	GGCC	9 cut(s)	127, 226, 245, 400, 570, 668, 1190, 1661, 1744
HapII	CCGG	3 cut(s)	728, 1382, 1662
HgaI	GACGC	1 cut(s)	2230
HincII	GTYRAC	3 cut(s)	1669, 2018, 2167
HindII	GTYRAC	3 cut(s)	1669, 2018, 2167
HindIII	AAGCTT	2 cut(s)	356, 2329
HinfI	GANTC	3 cut(s)	1042, 1376, 2500
HpaII	CCGG	3 cut(s)	728, 1382, 1662
Hpy166II	GTNNAC	8 cut(s)	295, 529, 1294, 1479, 1669, 2018, 2167, 2461
Hpy188I	TCNGA	8 cut(s)	239, 1343, 1465, 1964, 2065, 2249, 2295, 2445
Hpy8I	GTNNAC	8 cut(s)	295, 529, 1294, 1479, 1669, 2018, 2167, 2461
HpyAV	CCTTC	7 cut(s)	744, 1150, 1256, 1663, 1855, 1934, 2041
HpyCH4III	ACNGT	4 cut(s)	552, 1288, 1696, 2164
HpyCH4IV	ACGT	2 cut(s)	291, 2457
HpyF10VI	GCNNNNNNNGC	6 cut(s)	665, 793, 1187, 1685, 2137, 2430
HpyF3I	CTNAG	7 cut(s)	446, 1120, 1462, 2064, 2196, 2280, 2526
HpySE526I	ACGT	2 cut(s)	291, 2457
KflI	GGGWCCC	1 cut(s)	1030
Kpn2I	TCCGGA	1 cut(s)	1381
Ksp22I	TGATCA	1 cut(s)	94
LguI	GCTCTTC	2 cut(s)	42, 1619
Lsp1109I	GCAGC	6 cut(s)	668, 1165, 1330, 2062, 2196, 2420
LweI	GCATC	7 cut(s)	5, 118, 706, 1275, 1819, 1921, 2019
MaeI	CTAG	6 cut(s)	917, 1763, 2097, 2132, 2142, 2229
MaeII	ACGT	2 cut(s)	291, 2457
MaeIII	GTNAC	9 cut(s)	130, 147, 311, 382, 514, 743, 1043, 1559, 2158
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	2 cut(s)	911, 2025
MhlI	GDGCHC	1 cut(s)	1440
MlsI	TGGCCA	1 cut(s)	1190
MluNI	TGGCCA	1 cut(s)	1190
MlyI	GAGTC	3 cut(s)	1051, 1385, 2494
MmeI	TCCRAC	3 cut(s)	664, 1321, 2272
Mox20I	TGGCCA	1 cut(s)	1190
MroI	TCCGGA	1 cut(s)	1381
MroXI	GAANNNNTTC	1 cut(s)	1389
MscI	TGGCCA	1 cut(s)	1190
MseI	TTAA	4 cut(s)	29, 354, 1221, 1823
MslI	CAYNNNNRTG	5 cut(s)	13, 524, 759, 1514, 1734
Msp20I	TGGCCA	1 cut(s)	1190
MspA1I	CMGCKG	1 cut(s)	2279
MspI	CCGG	3 cut(s)	728, 1382, 1662
MspR9I	CCNGG	2 cut(s)	1107, 1663
MunI	CAATTG	1 cut(s)	1215
Mva1269I	GAATGC	2 cut(s)	1527, 2486
MvaI	CCWGG	1 cut(s)	1107
MvnI	CGCG	1 cut(s)	1958
MwoI	GCNNNNNNNGC	6 cut(s)	665, 793, 1187, 1685, 2137, 2430
NciI	CCSGG	1 cut(s)	1663
NcoI	CCATGG	3 cut(s)	424, 692, 937
NdeI	CATATG	2 cut(s)	136, 622
NheI	GCTAGC	1 cut(s)	2131
NlaIV	GGNNCC	8 cut(s)	9, 422, 456, 1031, 1032, 1104, 1386, 1613
NmuCI	GTSAC	7 cut(s)	147, 311, 382, 514, 1043, 1559, 2158
NruI	TCGCGA	1 cut(s)	1958
NspI	RCATGY	2 cut(s)	934, 1513
PciI	ACATGT	2 cut(s)	930, 1509
PciSI	GCTCTTC	2 cut(s)	42, 1619
PcsI	WCGNNNNNNNCGW	1 cut(s)	2454
PctI	GAATGC	2 cut(s)	1527, 2486
PdmI	GAANNNNTTC	1 cut(s)	1389
PkrI	GCNGC	7 cut(s)	7, 658, 1180, 1320, 2052, 2186, 2435
Ple19I	CGATCG	1 cut(s)	2448
PleI	GAGTC	3 cut(s)	1050, 1384, 2494
PpsI	GAGTC	3 cut(s)	1050, 1384, 2494
PpuMI	RGGWCCY	2 cut(s)	454, 1030
PscI	ACATGT	2 cut(s)	930, 1509
PshAI	GACNNNNGTC	1 cut(s)	1289
Psp124BI	GAGCTC	1 cut(s)	1440
Psp1406I	AACGTT	2 cut(s)	291, 2457
Psp5II	RGGWCCY	2 cut(s)	454, 1030
Psp6I	CCWGG	1 cut(s)	1105
PspFI	CCCAGC	1 cut(s)	1803
PspGI	CCWGG	1 cut(s)	1105
PspN4I	GGNNCC	8 cut(s)	9, 422, 456, 1031, 1032, 1104, 1386, 1613
PspPI	GGNCC	8 cut(s)	125, 398, 454, 569, 1030, 1742, 1870, 1892
PspPPI	RGGWCCY	2 cut(s)	454, 1030
PstI	CTGCAG	1 cut(s)	868
PsuI	RGATCY	2 cut(s)	911, 2025
PvuI	CGATCG	1 cut(s)	2448
RruI	TCGCGA	1 cut(s)	1958
RseI	CAYNNNNRTG	5 cut(s)	13, 524, 759, 1514, 1734
SacI	GAGCTC	1 cut(s)	1440
SalI	GTCGAC	1 cut(s)	2016
SapI	GCTCTTC	2 cut(s)	42, 1619
SaqAI	TTAA	4 cut(s)	29, 354, 1221, 1823
SatI	GCNGC	7 cut(s)	6, 657, 1179, 1319, 2051, 2185, 2434
Sau96I	GGNCC	8 cut(s)	125, 398, 454, 569, 1030, 1742, 1870, 1892
ScaI	AGTACT	1 cut(s)	497
SchI	GAGTC	3 cut(s)	1051, 1385, 2494
ScrFI	CCNGG	2 cut(s)	1107, 1663
SduI	GDGCHC	1 cut(s)	1440
SfaNI	GCATC	7 cut(s)	5, 118, 706, 1275, 1819, 1921, 2019
SfcI	CTRYAG	1 cut(s)	864
SinI	GGWCC	4 cut(s)	454, 1030, 1870, 1892
SmiMI	CAYNNNNRTG	5 cut(s)	13, 524, 759, 1514, 1734
SmlI	CTYRAG	3 cut(s)	561, 1049, 1490
SmoI	CTYRAG	3 cut(s)	561, 1049, 1490
SsiI	CCGC	5 cut(s)	5, 892, 1713, 2277, 2452
SspMI	CTAG	6 cut(s)	917, 1763, 2097, 2132, 2142, 2229
SstI	GAGCTC	1 cut(s)	1440
StyD4I	CCNGG	2 cut(s)	1105, 1661
StyI	CCWWGG	9 cut(s)	45, 82, 424, 692, 937, 1025, 1401, 2096, 2367
TaaI	ACNGT	4 cut(s)	552, 1288, 1696, 2164
TaiI	ACGT	2 cut(s)	294, 2460
TaqI	TCGA	4 cut(s)	391, 1134, 2017, 2448
TaqII	GACCGA	3 cut(s)	728, 1547, 2003
TatI	WGTACW	2 cut(s)	495, 600
TauI	GCSGC	1 cut(s)	8
Tru1I	TTAA	4 cut(s)	29, 354, 1221, 1823
Tru9I	TTAA	4 cut(s)	29, 354, 1221, 1823
TscAI	CASTG	3 cut(s)	1780, 2027, 2420
TseFI	GTSAC	7 cut(s)	147, 311, 382, 514, 1043, 1559, 2158
TseI	GCWGC	6 cut(s)	656, 1178, 1318, 2050, 2184, 2433
Tsp45I	GTSAC	7 cut(s)	147, 311, 382, 514, 1043, 1559, 2158
TspGWI	ACGGA	2 cut(s)	46, 762
TspRI	CASTG	3 cut(s)	1780, 2027, 2420
VpaK11BI	GGWCC	4 cut(s)	454, 1030, 1870, 1892
XagI	CCTNNNNNAGG	2 cut(s)	306, 564
XapI	RAATTY	3 cut(s)	1348, 1407, 1498
XceI	RCATGY	2 cut(s)	934, 1513
XmaJI	CCTAGG	1 cut(s)	2096
XmiI	GTMKAC	2 cut(s)	1293, 2017
XmnI	GAANNNNTTC	1 cut(s)	1389
XspI	CTAG	6 cut(s)	917, 1763, 2097, 2132, 2142, 2229
ZrmI	AGTACT	1 cut(s)	497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.