Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002763

Physical Location & Seq

Genomic Coordinates Reverse (-)

28914290 .. 28916767

Gene Structure 2478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00406440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGGTGATCTCAGCCGGGGCGACGATAGCCCATTCCAAAGGCCATGAAGGGAATCAAACGCTTCAACATGGGCCTGTGACATACGATGGCAGGTCACTGATTATCAACGGAAAGCGAGAGCTTCTGTTTTCGGGTTCAATCCACTACACCCGAAGCACCCCAGAAATGTGGCCTGATCTTCTCCGAAAGGCCAAACAGGGCGGCTTGAATGTGATTCAGACCTATGTGTTCTGGAACATTCATGAGCCTGTGCAAGGTCAGTGCAATTTCAAAGGGAACTATGATTTGGTGAAGTTCATAAAACTAGTTCAGAAGCATGGAATGTATGTGACACTTAGAGTAGGGCCATTCATCCAAGCCGAATGGAACCACGGAGGACTCCCATATTGGCTCAGAGAAGTCCCAAATCTCCTATTCCGTACCGACAACGCACCGTACAAGTACTACATGAAGAAGTATGTGACCATGATTGTGAAAAGGATGAGGGAGGCGAAGCTATTTAGTCCACAGGGAGGTCCCATTATATTAGCACAAATTGAAAACGAGTACAATCATATCCAACTGGCGTATAAAGAGATGGGATACAGTTACGTCCGATGGGCAGCGAACATGGCGGTGAAGCAGGACGCCGGAGTACCATGGATCATGTGCAAGCAGATGGACGCTCCGGATCCGGTGATCAATACTTGCAACGGAAGGCATTGTGGTGATACTTTCCAAGGGCCTAATAAGCCTAACAAGCCTGCTCTATGGACCGAAAACTGGACTGCTCAATACCGAGTATTTGGTGACCCTCCTTCCCAGAGGCCAGTGGAAGACATTGCATTTTCGGTTGCTCGTTTTGTTTCGAAAAATGGGGTTCTAACAAACTATTACATGTACCATGGAGGGACTAATTTTGGCAGAACAAGCGCCATTTTCACGACTACTCGCTACTACGACGAGGCTCCCGTTGACGAATATGGTCTGCCTAGAGACCCTAAATGGAGTCACCTTAGGGACTTACACAAGGCTTTGAAACTATGTAAGAAGCCTTTGCTTTGGGGAGTTTCTGGAGTCCAGAAGCTAGGCAAGGACACCGAGGCTCGTTTCTATGAGTTGATGGACAACTCCACAATCTGTGCTGCCTTCTTGGCCAACAATAACTCTAGAACTGAAGCAATTGTTAATTGGCGAGGTCAAGAATACTACTTGCCGCCTCATTCGATTAGCATTCTCCCCGATTGCAAGACTGTTGTCTTCAATACTCAAACAATTGTGTCGCAACACAACGCGAGGAACTTTGTTAGATCAAAGGTTGCCAATAATTTGAAATGGAAGAAGTCTCAGGAACCAATTCCAAGCATCGTTCAAGTTCCTATCAATAGCAAGACACCTCTAGAGCTTTACAGCTTGCTAAAAGATGCTTCAGACTACGCATGGTACACCACCACCCTTCGGTTGAGCAGGCGTGACTTGCCCATGAAGGCAAGTATTAAACCAGTTCTACGAATTGCAAATCTCGGTCATGCAATGCTTGTGTTTGTTAATGGCAAATATGTTGGTTCGGGACATGGGAGCCACGACGAGAAGAGTTTCATCTTCCAGAAAACGGTTAGCTTTAAGGAGGGAGTCAACGAAATAGGACTATTTGCCATGACAGTGGGGCTCCCAGACAGCGGAGCCTACATGGAGCACAGGTACGCAGGGCCTCGAGAGATTGTAGTTCTAGGGCTGAACACAGGAACCCTAGATCTCTCACAAAATGGGTGGGGACATCATATTGGTCTGAACGGAGAAAAAGTAAAACTGTTCACCGAGGAGGGATCCAAACAAGTTCAATGGAGAAATACAAAAGGAGCAGCTCAAGCACTAACATGGTACAAGACATATTTTGATGCTCCAGAAGGACGTGACCCGGTTGCAATCCGAATGACAGGCATGGGAAAAGGAATGATTTGGGTAAATGGCCAAAGTATTGGTCGACACTGGATGTCCTTCCTTTCTCCACTAGGGCAACCTACTCAATCAGAATACCATATCCCGAGATCCTTCATTAAACCTAAACAAAATTTTCTTGTTGTATTGGAAGAGGAGCCGATGAAGCCTGATGACATTGAGATCCTAACAGTCAACAGGGACACAATCTGTAGCTTCATTACTGAGTATCATCCACCAAACGTAAAGTCCTGGGAAAGAAAAAATAGCCATTTTCGACCAGTGTTGGATGTTGTTAGAACTTCGACGGAGCTCAAGTGCCCGAACTACAAAAAGATTGTTGCTGTTGAGTTTGCAAGCTTTGGTGATCCAACTGGGGTATGTGGAAGCTATGTCTTGGGTAACTGCAACTCCCCTATATCCAAAGAGATTGTAGAACAACATTGCTTGGGAAAATCTAGCTGCGCAGTCCCGATTGACGACAAGCTTTTCTTTAAGAAAAATGATGCGTGCCCAGATATCAAGAAGACACTTGCTGCTCAAGTAAAGTGTGCTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

825

Amino Acids

93.4

Weight (kDa)

9.24

Isoelectric Point (pI)

36.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	32 - 338	3.1e-116	Glycosyl hydrolases family 35
GHD	PF17834	368 - 418	3.2e-20	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	618 - 684	7.4e-25	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	744 - 823	9.2e-16	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16730 AT4G35010
fragaria_vesca	FvH4_2g01270 FvH4_4g13900
malus_domestica	MD04G1010100.v1.1 MD05G1121000.v1.1 MD10G1095200.v1.1 MD13G1284600.v1.1
prunus_persica	Prupe.1G009200_v2.0.a1 Prupe.1G009300_v2.0.a1 Prupe.8G164800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0475241 RchiOBHm_Chr4g0415021 RchiOBHm_Chr6g0251931
rosa_laevigata	RLG00000008102 RLG00000015418 RLG00000023857
rosa_multiflora	Rmu_sc0003611.1_g000013 Rmu_sc0008157.1_g000007 Rmu_ssc0000303.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358760 Rroxscaffold_6G00406440
rosa_rugosa	Rorug03G0147300 Rorug04G0131700 Rorug05G0505100 Rorug05G0505200 Rorug05G0505200
rosa_samantha	Rh3AG197300 Rh4AG191000 Rh4BG189100 Rh4CG202000 Rh4DG189500 Rh6AG016400 Rh6BG014400 Rh6CG011300 Rh6DG012600
rosa_wichuraiana	Rw3G017940 Rw4G016250 Rw6G001570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2383
Acc36I	ACCTGC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	1963
AccII	CGCG	1 cut(s)	1274
AccIII	TCCGGA	1 cut(s)	667
AciI	CCGC	4 cut(s)	201, 614, 1196, 1659
AclWI	GGATC	8 cut(s)	650, 665, 678, 1800, 1813, 2022, 2095, 2279
AcoI	YGGCCR	2 cut(s)	1134, 1948
AcsI	RAATTY	1 cut(s)	2050
AcuI	CTGAAG	2 cut(s)	1176, 1392
AcyI	GRCGYC	1 cut(s)	627
AfaI	GTAC	9 cut(s)	421, 437, 443, 548, 636, 881, 1424, 1682, 1862
AfiI	CCNNNNNNNGG	6 cut(s)	254, 512, 762, 1437, 1591, 1658
AflIII	ACRYGT	1 cut(s)	876
AhlI	ACTAGT	1 cut(s)	304
AjiI	CACGTC	1 cut(s)	1892
AjnI	CCWGG	1 cut(s)	2168
AjuI	GAANNNNNNNTTGG	2 cut(s)	269, 301
Alw21I	GWGCWC	2 cut(s)	1677, 2232
Alw26I	GTCTC	2 cut(s)	969, 1329
AlwI	GGATC	8 cut(s)	650, 665, 678, 1800, 1813, 2022, 2095, 2279
Ama87I	CYCGRG	2 cut(s)	1692, 2023
Aor13HI	TCCGGA	1 cut(s)	667
ApeKI	GCWGC	5 cut(s)	602, 1124, 1841, 2379, 2453
ApoI	RAATTY	1 cut(s)	2050
ArsI	GACNNNNNNTTYG	4 cut(s)	1945, 1977, 2150, 2182
Asp700I	GAANNNNTTC	2 cut(s)	1335, 1574
AspLEI	GCGC	2 cut(s)	914, 2384
AspS9I	GGNCC	6 cut(s)	71, 344, 515, 722, 753, 1688
AsuC2I	CCSGG	2 cut(s)	16, 1898
AsuHPI	GGTGA	9 cut(s)	16, 301, 628, 688, 719, 800, 983, 1786, 2294
AsuII	TTCGAA	1 cut(s)	848
AvaI	CYCGRG	2 cut(s)	1692, 2023
AvaII	GGWCC	2 cut(s)	515, 753
AxyI	CCTNAGG	1 cut(s)	995
BaeGI	GKGCMC	2 cut(s)	2240, 2432
BalI	TGGCCA	2 cut(s)	1136, 1950
BamHI	GGATCC	2 cut(s)	670, 1805
BanII	GRGCYC	2 cut(s)	1650, 2232
BbsI	GAAGAC	3 cut(s)	822, 1231, 2450
Bbv12I	GWGCWC	2 cut(s)	1677, 2232
BbvI	GCAGC	5 cut(s)	614, 1111, 1853, 2366, 2440
BccI	CCATC	5 cut(s)	80, 571, 591, 652, 1096
BciT130I	CCWGG	1 cut(s)	2170
BciVI	GTATCC	1 cut(s)	575
BclI	TGATCA	1 cut(s)	678
BcnI	CCSGG	2 cut(s)	16, 1898
BcoDI	GTCTC	2 cut(s)	969, 1329
BcuI	ACTAGT	1 cut(s)	304
BfaI	CTAG	9 cut(s)	305, 972, 1067, 1149, 1379, 1709, 1730, 1991, 2376
BfmI	CTRYAG	1 cut(s)	2128
BfoI	RGCGCY	1 cut(s)	915
BfuAI	ACCTGC	1 cut(s)	81
BfuI	GTATCC	1 cut(s)	575
BglI	GCCNNNNNGGC	1 cut(s)	1133
BglII	AGATCT	1 cut(s)	1732
BisI	GCNGC	7 cut(s)	202, 603, 1125, 1196, 1842, 2380, 2454
BlsI	GCNGC	7 cut(s)	203, 604, 1126, 1197, 1843, 2381, 2455
BmcAI	AGTACT	1 cut(s)	443
Bme1390I	CCNGG	3 cut(s)	16, 1898, 2170
Bme18I	GGWCC	2 cut(s)	515, 753
BmeT110I	CYCGRG	2 cut(s)	1692, 2023
BmgBI	CACGTC	1 cut(s)	1892
BmgT120I	GGNCC	6 cut(s)	71, 344, 515, 722, 753, 1688
BmrFI	CCNGG	3 cut(s)	16, 1898, 2170
BmrI	ACTGGG	1 cut(s)	2301
BmsI	GCATC	4 cut(s)	1353, 1393, 1867, 2413
BmuI	ACTGGG	1 cut(s)	2301
BoxI	GACNNNNGTC	1 cut(s)	1235
BpiI	GAAGAC	3 cut(s)	822, 1231, 2450
BpmI	CTGGAG	2 cut(s)	1074, 1866
Bpu14I	TTCGAA	1 cut(s)	848
BpuEI	CTTGAG	3 cut(s)	1830, 2216, 2442
BpuMI	CCSGG	2 cut(s)	16, 1898
BsaHI	GRCGYC	1 cut(s)	627
BsaI	GGTCTC	1 cut(s)	969
BsaJI	CCNNGG	8 cut(s)	15, 370, 638, 718, 883, 1080, 1797, 2169
BsaWI	WCCGGW	2 cut(s)	667, 673
BsaXI	ACNNNNNCTCC	8 cut(s)	1664, 1694, 1767, 1797, 2219, 2249, 2312, 2342
Bsc4I	CCNNNNNNNGG	6 cut(s)	254, 512, 762, 1437, 1591, 1658
Bse1I	ACTGG	7 cut(s)	567, 767, 809, 1481, 1973, 2198, 2296
Bse21I	CCTNAGG	1 cut(s)	995
Bse3DI	GCAATG	3 cut(s)	819, 1518, 2359
BseAI	TCCGGA	1 cut(s)	667
BseBI	CCWGG	1 cut(s)	2170
BseDI	CCNNGG	8 cut(s)	15, 370, 638, 718, 883, 1080, 1797, 2169
BseGI	GGATG	5 cut(s)	351, 486, 1977, 2149, 2212
BseLI	CCNNNNNNNGG	6 cut(s)	254, 512, 762, 1437, 1591, 1658
BseMI	GCAATG	3 cut(s)	819, 1518, 2359
BseMII	CTCAG	4 cut(s)	24, 406, 1340, 2133
BseNI	ACTGG	7 cut(s)	567, 767, 809, 1481, 1973, 2198, 2296
BseRI	GAGGAG	2 cut(s)	1814, 2087
BseSI	GKGCMC	2 cut(s)	2240, 2432
BseXI	GCAGC	5 cut(s)	614, 1111, 1853, 2366, 2440
Bsh1236I	CGCG	1 cut(s)	1274
BsiHKAI	GWGCWC	2 cut(s)	1677, 2232
BsiHKCI	CYCGRG	2 cut(s)	1692, 2023
BsiSI	CCGG	5 cut(s)	15, 630, 668, 674, 1898
BslFI	GGGAC	8 cut(s)	386, 501, 904, 1013, 1563, 1767, 2132, 2372
BslI	CCNNNNNNNGG	6 cut(s)	254, 512, 762, 1437, 1591, 1658
BsmAI	GTCTC	2 cut(s)	969, 1329
BsmFI	GGGAC	8 cut(s)	386, 501, 904, 1013, 1563, 1767, 2132, 2372
BsmI	GAATGC	1 cut(s)	1212
Bso31I	GGTCTC	1 cut(s)	969
BsoBI	CYCGRG	2 cut(s)	1692, 2023
Bsp119I	TTCGAA	1 cut(s)	848
Bsp1286I	GDGCHC	5 cut(s)	1650, 1677, 2232, 2240, 2432
Bsp13I	TCCGGA	1 cut(s)	667
Bsp19I	CCATGG	2 cut(s)	638, 883
BspACI	CCGC	4 cut(s)	201, 614, 1196, 1659
BspCNI	CTCAG	4 cut(s)	23, 405, 1339, 2134
BspEI	TCCGGA	1 cut(s)	667
BspFNI	CGCG	1 cut(s)	1274
BspHI	TCATGA	1 cut(s)	241
BspMI	ACCTGC	1 cut(s)	81
BspPI	GGATC	8 cut(s)	650, 665, 678, 1800, 1813, 2022, 2095, 2279
BspT104I	TTCGAA	1 cut(s)	848
BspTNI	GGTCTC	1 cut(s)	969
BsrDI	GCAATG	3 cut(s)	819, 1518, 2359
BsrI	ACTGG	7 cut(s)	567, 767, 809, 1481, 1973, 2198, 2296
BssECI	CCNNGG	8 cut(s)	15, 370, 638, 718, 883, 1080, 1797, 2169
BssNI	GRCGYC	1 cut(s)	627
BssT1I	CCWWGG	3 cut(s)	638, 718, 883
Bst2UI	CCWGG	1 cut(s)	2170
Bst4CI	ACNGT	7 cut(s)	435, 587, 1234, 1594, 1642, 1791, 2110
Bst6I	CTCTTC	2 cut(s)	1565, 2064
BstACI	GRCGYC	1 cut(s)	627
BstBI	TTCGAA	1 cut(s)	848
BstC8I	GCNNGC	6 cut(s)	653, 744, 1394, 1448, 2275, 2428
BstDEI	CTNAG	6 cut(s)	10, 335, 392, 995, 1326, 2142
BstDSI	CCRYGG	3 cut(s)	370, 638, 883
BstEII	GGTNACC	1 cut(s)	788
BstENI	CCTNNNNNAGG	1 cut(s)	252
BstF5I	GGATG	5 cut(s)	351, 486, 1977, 2149, 2212
BstFNI	CGCG	1 cut(s)	1274
BstH2I	RGCGCY	1 cut(s)	915
BstHHI	GCGC	2 cut(s)	914, 2384
BstMAI	GTCTC	2 cut(s)	969, 1329
BstMWI	GCNNNNNNNGC	9 cut(s)	26, 611, 730, 739, 909, 1133, 1456, 1847, 2083
BstNI	CCWGG	1 cut(s)	2170
BstNSI	RCATGY	1 cut(s)	880
BstPAI	GACNNNNGTC	1 cut(s)	1235
BstPI	GGTNACC	1 cut(s)	788
BstSCI	CCNGG	3 cut(s)	14, 1896, 2168
BstSFI	CTRYAG	1 cut(s)	2128
BstSLI	GKGCMC	2 cut(s)	2240, 2432
BstUI	CGCG	1 cut(s)	1274
BstV1I	GCAGC	5 cut(s)	614, 1111, 1853, 2366, 2440
BstV2I	GAAGAC	3 cut(s)	822, 1231, 2450
BstX2I	RGATCY	5 cut(s)	670, 1732, 1805, 2027, 2100
BstXI	CCANNNNNNTGG	3 cut(s)	168, 1642, 1958
BstYI	RGATCY	5 cut(s)	670, 1732, 1805, 2027, 2100
Bsu36I	CCTNAGG	1 cut(s)	995
BsuI	GTATCC	1 cut(s)	575
BtgI	CCRYGG	3 cut(s)	370, 638, 883
BtrI	CACGTC	1 cut(s)	1892
BtsCI	GGATG	5 cut(s)	351, 486, 1977, 2149, 2212
BtsIMutI	CAGTG	6 cut(s)	95, 266, 816, 1647, 1966, 2205
BveI	ACCTGC	1 cut(s)	81
Cac8I	GCNNGC	6 cut(s)	653, 744, 1394, 1448, 2275, 2428
CciI	TCATGA	1 cut(s)	241
CfoI	GCGC	2 cut(s)	914, 2384
Cfr13I	GGNCC	6 cut(s)	71, 344, 515, 722, 753, 1688
CseI	GACGC	2 cut(s)	635, 671
Csp6I	GTAC	9 cut(s)	420, 436, 442, 547, 635, 880, 1423, 1681, 1861
CspCI	CAANNNNNGTGG	2 cut(s)	1730, 1765
CviQI	GTAC	9 cut(s)	420, 436, 442, 547, 635, 880, 1423, 1681, 1861
DdeI	CTNAG	6 cut(s)	10, 335, 392, 995, 1326, 2142
EaeI	YGGCCR	2 cut(s)	1134, 1948
Eam1104I	CTCTTC	2 cut(s)	1565, 2064
EarI	CTCTTC	2 cut(s)	1565, 2064
Ecl136II	GAGCTC	1 cut(s)	2230
Eco130I	CCWWGG	3 cut(s)	638, 718, 883
Eco24I	GRGCYC	2 cut(s)	1650, 2232
Eco31I	GGTCTC	1 cut(s)	969
Eco32I	GATATC	1 cut(s)	2437
Eco47I	GGWCC	2 cut(s)	515, 753
Eco53kI	GAGCTC	1 cut(s)	2230
Eco57I	CTGAAG	2 cut(s)	1176, 1392
Eco81I	CCTNAGG	1 cut(s)	995
Eco88I	CYCGRG	2 cut(s)	1692, 2023
Eco91I	GGTNACC	1 cut(s)	788
EcoICRI	GAGCTC	1 cut(s)	2230
EcoNI	CCTNNNNNAGG	1 cut(s)	252
EcoO109I	RGGNCCY	3 cut(s)	515, 722, 1688
EcoO65I	GGTNACC	1 cut(s)	788
EcoRII	CCWGG	1 cut(s)	2168
EcoRV	GATATC	1 cut(s)	2437
EcoT14I	CCWWGG	3 cut(s)	638, 718, 883
EcoT38I	GRGCYC	2 cut(s)	1650, 2232
ErhI	CCWWGG	3 cut(s)	638, 718, 883
FalI	AAGNNNNNCTT	2 cut(s)	2393, 2425
FaqI	GGGAC	8 cut(s)	386, 501, 904, 1013, 1563, 1767, 2132, 2372
FbaI	TGATCA	1 cut(s)	678
FblI	GTMKAC	1 cut(s)	1963
Fnu4HI	GCNGC	7 cut(s)	202, 603, 1125, 1196, 1842, 2380, 2454
FokI	GGATG	5 cut(s)	338, 493, 1984, 2136, 2219
FriOI	GRGCYC	2 cut(s)	1650, 2232
Fsp4HI	GCNGC	7 cut(s)	202, 603, 1125, 1196, 1842, 2380, 2454
FspBI	CTAG	9 cut(s)	305, 972, 1067, 1149, 1379, 1709, 1730, 1991, 2376
FspI	TGCGCA	1 cut(s)	2383
GlaI	GCGC	2 cut(s)	913, 2383
GluI	GCNGC	7 cut(s)	202, 603, 1125, 1196, 1842, 2380, 2454
GsuI	CTGGAG	2 cut(s)	1074, 1866
HaeII	RGCGCY	1 cut(s)	915
HapII	CCGG	5 cut(s)	15, 630, 668, 674, 1898
HgaI	GACGC	2 cut(s)	635, 671
HhaI	GCGC	2 cut(s)	914, 2384
Hin1I	GRCGYC	1 cut(s)	627
Hin6I	GCGC	2 cut(s)	912, 2382
HinP1I	GCGC	2 cut(s)	912, 2382
HincII	GTYRAC	4 cut(s)	955, 1615, 1964, 2113
HindII	GTYRAC	4 cut(s)	955, 1615, 1964, 2113
HindIII	AAGCTT	2 cut(s)	2275, 2402
HinfI	GANTC	6 cut(s)	52, 214, 378, 988, 1056, 1611
HpaII	CCGG	5 cut(s)	15, 630, 668, 674, 1898
HphI	GGTGA	9 cut(s)	16, 301, 628, 688, 719, 800, 983, 1786, 2294
Hpy166II	GTNNAC	7 cut(s)	506, 955, 1425, 1615, 1794, 1964, 2113
Hpy188I	TCNGA	9 cut(s)	185, 219, 312, 395, 596, 1411, 1770, 1910, 2011
Hpy8I	GTNNAC	7 cut(s)	506, 955, 1425, 1615, 1794, 1964, 2113
Hpy99I	CGWCG	4 cut(s)	25, 944, 1568, 2227
HpyAV	CCTTC	9 cut(s)	41, 690, 807, 1138, 1445, 1459, 1880, 1987, 2041
HpyCH4III	ACNGT	7 cut(s)	435, 587, 1234, 1594, 1642, 1791, 2110
HpyCH4IV	ACGT	3 cut(s)	591, 1891, 2160
HpyF10VI	GCNNNNNNNGC	9 cut(s)	26, 611, 730, 739, 909, 1133, 1456, 1847, 2083
HpyF3I	CTNAG	6 cut(s)	10, 335, 392, 995, 1326, 2142
HpySE526I	ACGT	3 cut(s)	591, 1891, 2160
Hsp92I	GRCGYC	1 cut(s)	627
HspAI	GCGC	2 cut(s)	912, 2382
Kpn2I	TCCGGA	1 cut(s)	667
Ksp22I	TGATCA	1 cut(s)	678
Lsp1109I	GCAGC	5 cut(s)	614, 1111, 1853, 2366, 2440
LweI	GCATC	4 cut(s)	1353, 1393, 1867, 2413
MaeI	CTAG	9 cut(s)	305, 972, 1067, 1149, 1379, 1709, 1730, 1991, 2376
MaeII	ACGT	3 cut(s)	591, 1891, 2160
MboII	GAAGA	9 cut(s)	170, 463, 827, 1231, 1330, 1573, 1582, 2081, 2455
MfeI	CAATTG	2 cut(s)	1161, 1254
MflI	RGATCY	5 cut(s)	670, 1732, 1805, 2027, 2100
MhlI	GDGCHC	5 cut(s)	1650, 1677, 2232, 2240, 2432
MlsI	TGGCCA	2 cut(s)	1136, 1950
MluNI	TGGCCA	2 cut(s)	1136, 1950
MlyI	GAGTC	4 cut(s)	372, 997, 1065, 1620
MmeI	TCCRAC	3 cut(s)	583, 2184, 2312
Mox20I	TGGCCA	2 cut(s)	1136, 1950
MroI	TCCGGA	1 cut(s)	667
MroXI	GAANNNNTTC	2 cut(s)	1335, 1574
MscI	TGGCCA	2 cut(s)	1136, 1950
MseI	TTAA	6 cut(s)	1167, 1476, 1527, 1602, 2037, 2412
MslI	CAYNNNNRTG	5 cut(s)	470, 614, 705, 1640, 1855
Msp20I	TGGCCA	2 cut(s)	1136, 1950
MspA1I	CMGCKG	1 cut(s)	1659
MspI	CCGG	5 cut(s)	15, 630, 668, 674, 1898
MspR9I	CCNGG	3 cut(s)	16, 1898, 2170
MunI	CAATTG	2 cut(s)	1161, 1254
Mva1269I	GAATGC	1 cut(s)	1212
MvaI	CCWGG	1 cut(s)	2170
MvnI	CGCG	1 cut(s)	1274
MwoI	GCNNNNNNNGC	9 cut(s)	26, 611, 730, 739, 909, 1133, 1456, 1847, 2083
NciI	CCSGG	2 cut(s)	16, 1898
NcoI	CCATGG	2 cut(s)	638, 883
NmuCI	GTSAC	8 cut(s)	76, 93, 328, 460, 788, 989, 1451, 1892
NsbI	TGCGCA	1 cut(s)	2383
NspI	RCATGY	1 cut(s)	880
NspV	TTCGAA	1 cut(s)	848
PaeR7I	CTCGAG	1 cut(s)	1692
PagI	TCATGA	1 cut(s)	241
PciI	ACATGT	1 cut(s)	876
PcsI	WCGNNNNNNNCGW	1 cut(s)	948
PctI	GAATGC	1 cut(s)	1212
PdmI	GAANNNNTTC	2 cut(s)	1335, 1574
PfeI	GAWTC	2 cut(s)	52, 214
PkrI	GCNGC	7 cut(s)	203, 604, 1126, 1197, 1843, 2381, 2455
PleI	GAGTC	4 cut(s)	372, 996, 1064, 1619
PpsI	GAGTC	4 cut(s)	372, 996, 1064, 1619
PpuMI	RGGWCCY	1 cut(s)	515
PscI	ACATGT	1 cut(s)	876
PshAI	GACNNNNGTC	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	2232
Psp5II	RGGWCCY	1 cut(s)	515
Psp6I	CCWGG	1 cut(s)	2168
PspEI	GGTNACC	1 cut(s)	788
PspGI	CCWGG	1 cut(s)	2168
PspPI	GGNCC	6 cut(s)	71, 344, 515, 722, 753, 1688
PspPPI	RGGWCCY	1 cut(s)	515
PsuI	RGATCY	5 cut(s)	670, 1732, 1805, 2027, 2100
RsaI	GTAC	9 cut(s)	421, 437, 443, 548, 636, 881, 1424, 1682, 1862
RsaNI	GTAC	9 cut(s)	420, 436, 442, 547, 635, 880, 1423, 1681, 1861
RseI	CAYNNNNRTG	5 cut(s)	470, 614, 705, 1640, 1855
SacI	GAGCTC	1 cut(s)	2232
SalI	GTCGAC	1 cut(s)	1962
SaqAI	TTAA	6 cut(s)	1167, 1476, 1527, 1602, 2037, 2412
SatI	GCNGC	7 cut(s)	202, 603, 1125, 1196, 1842, 2380, 2454
Sau96I	GGNCC	6 cut(s)	71, 344, 515, 722, 753, 1688
ScaI	AGTACT	1 cut(s)	443
SchI	GAGTC	4 cut(s)	372, 997, 1065, 1620
ScrFI	CCNGG	3 cut(s)	16, 1898, 2170
SduI	GDGCHC	5 cut(s)	1650, 1677, 2232, 2240, 2432
SfaNI	GCATC	4 cut(s)	1353, 1393, 1867, 2413
SfcI	CTRYAG	1 cut(s)	2128
Sfr274I	CTCGAG	1 cut(s)	1692
SfuI	TTCGAA	1 cut(s)	848
SinI	GGWCC	2 cut(s)	515, 753
SlaI	CTCGAG	1 cut(s)	1692
SmiMI	CAYNNNNRTG	5 cut(s)	470, 614, 705, 1640, 1855
SmlI	CTYRAG	4 cut(s)	1692, 1845, 2231, 2457
SmoI	CTYRAG	4 cut(s)	1692, 1845, 2231, 2457
SpeI	ACTAGT	1 cut(s)	304
SsiI	CCGC	4 cut(s)	201, 614, 1196, 1659
SspMI	CTAG	9 cut(s)	305, 972, 1067, 1149, 1379, 1709, 1730, 1991, 2376
SstI	GAGCTC	1 cut(s)	2232
StyD4I	CCNGG	3 cut(s)	14, 1896, 2168
StyI	CCWWGG	3 cut(s)	638, 718, 883
TaaI	ACNGT	7 cut(s)	435, 587, 1234, 1594, 1642, 1791, 2110
TaiI	ACGT	3 cut(s)	594, 1894, 2163
TaqI	TCGA	6 cut(s)	848, 1205, 1693, 1963, 2194, 2222
TaqII	GACCGA	2 cut(s)	770, 1493
TatI	WGTACW	2 cut(s)	441, 546
TauI	GCSGC	2 cut(s)	204, 1198
TfiI	GAWTC	2 cut(s)	52, 214
Tru1I	TTAA	6 cut(s)	1167, 1476, 1527, 1602, 2037, 2412
Tru9I	TTAA	6 cut(s)	1167, 1476, 1527, 1602, 2037, 2412
TscAI	CASTG	6 cut(s)	102, 266, 816, 1647, 1973, 2205
TseFI	GTSAC	8 cut(s)	76, 93, 328, 460, 788, 989, 1451, 1892
TseI	GCWGC	5 cut(s)	602, 1124, 1841, 2379, 2453
Tsp45I	GTSAC	8 cut(s)	76, 93, 328, 460, 788, 989, 1451, 1892
TspGWI	ACGGA	6 cut(s)	123, 387, 407, 708, 1788, 2240
TspRI	CASTG	6 cut(s)	102, 266, 816, 1647, 1973, 2205
VpaK11BI	GGWCC	2 cut(s)	515, 753
XagI	CCTNNNNNAGG	1 cut(s)	252
XapI	RAATTY	1 cut(s)	2050
XbaI	TCTAGA	2 cut(s)	1148, 1378
XceI	RCATGY	1 cut(s)	880
XhoI	CTCGAG	1 cut(s)	1692
XmiI	GTMKAC	1 cut(s)	1963
XmnI	GAANNNNTTC	2 cut(s)	1335, 1574
XspI	CTAG	9 cut(s)	305, 972, 1067, 1149, 1379, 1709, 1730, 1991, 2376
ZrmI	AGTACT	1 cut(s)	443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.