beta-galactosidase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16730 AT4G35010 |
| fragaria_vesca | FvH4_2g01270 FvH4_4g13900 |
| malus_domestica | MD04G1010100.v1.1 MD05G1121000.v1.1 MD10G1095200.v1.1 MD13G1284600.v1.1 |
| prunus_persica | Prupe.1G009200_v2.0.a1 Prupe.1G009300_v2.0.a1 Prupe.8G164800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0475241 RchiOBHm_Chr4g0415021 RchiOBHm_Chr6g0251931 |
| rosa_laevigata | RLG00000008102 RLG00000015418 RLG00000023857 |
| rosa_multiflora | Rmu_sc0003611.1_g000013 Rmu_sc0008157.1_g000007 Rmu_ssc0000303.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00358760 Rroxscaffold_6G00406440 |
| rosa_rugosa | Rorug03G0147300 Rorug04G0131700 Rorug05G0505100 Rorug05G0505200 Rorug05G0505200 |
| rosa_samantha | Rh3AG197300 Rh4AG191000 Rh4BG189100 Rh4CG202000 Rh4DG189500 Rh6AG016400 Rh6BG014400 Rh6CG011300 Rh6DG012600 |
| rosa_wichuraiana | Rw3G017940 Rw4G016250 Rw6G001570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1673 |
| Acc36I | ACCTGC | 3 cut(s) | 159, 1275, 1673 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2369 |
| AccBSI | CCGCTC | 1 cut(s) | 498 |
| AccII | CGCG | 1 cut(s) | 916 |
| AciI | CCGC | 9 cut(s) | 60, 147, 496, 966, 1182, 1274, 1451, 2298, 2476 |
| AclWI | GGATC | 7 cut(s) | 728, 743, 943, 1888, 1921, 2170, 2354 |
| AcoI | YGGCCR | 2 cut(s) | 94, 2035 |
| AcsI | RAATTY | 1 cut(s) | 973 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 332, 590, 1228, 1733, 2369 |
| AgeI | ACCGGT | 1 cut(s) | 1432 |
| AjnI | CCWGG | 5 cut(s) | 481, 1103, 1129, 1535, 2512 |
| Alw21I | GWGCWC | 3 cut(s) | 27, 396, 1752 |
| Alw26I | GTCTC | 1 cut(s) | 1931 |
| AlwI | GGATC | 7 cut(s) | 728, 743, 943, 1888, 1921, 2170, 2354 |
| AoxI | GGCC | 8 cut(s) | 94, 148, 248, 422, 592, 799, 1763, 2035 |
| ApaI | GGGCCC | 1 cut(s) | 803 |
| ApeKI | GCWGC | 7 cut(s) | 541, 680, 683, 697, 1199, 2149, 2457 |
| ApoI | RAATTY | 1 cut(s) | 973 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 887, 919, 1558, 1590, 2225, 2257 |
| AseI | ATTAAT | 1 cut(s) | 759 |
| AsiGI | ACCGGT | 1 cut(s) | 1432 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1410, 1857 |
| AspA2I | CCTAGG | 1 cut(s) | 1049 |
| AspLEI | GCGC | 2 cut(s) | 916, 1151 |
| AsuC2I | CCSGG | 2 cut(s) | 20, 1727 |
| AsuHPI | GGTGA | 3 cut(s) | 379, 1061, 2369 |
| AsuII | TTCGAA | 2 cut(s) | 1564, 1984 |
| AvaII | GGWCC | 4 cut(s) | 478, 634, 868, 1054 |
| AvrII | CCTAGG | 1 cut(s) | 1049 |
| BaeGI | GKGCMC | 1 cut(s) | 803 |
| BalI | TGGCCA | 1 cut(s) | 96 |
| BanII | GRGCYC | 1 cut(s) | 803 |
| BbsI | GAAGAC | 1 cut(s) | 1306 |
| Bbv12I | GWGCWC | 3 cut(s) | 27, 396, 1752 |
| BbvI | GCAGC | 7 cut(s) | 553, 692, 695, 709, 1186, 2161, 2444 |
| BccI | CCATC | 6 cut(s) | 158, 605, 1724, 1818, 2232, 2498 |
| BciT130I | CCWGG | 5 cut(s) | 483, 1105, 1131, 1537, 2514 |
| BcnI | CCSGG | 2 cut(s) | 20, 1727 |
| BcoDI | GTCTC | 1 cut(s) | 1931 |
| BfaI | CTAG | 3 cut(s) | 1050, 1350, 1506 |
| BfmI | CTRYAG | 1 cut(s) | 646 |
| BfuAI | ACCTGC | 3 cut(s) | 159, 1275, 1673 |
| BglII | AGATCT | 1 cut(s) | 2102 |
| BisI | GCNGC | 9 cut(s) | 60, 148, 542, 681, 684, 698, 1200, 2150, 2458 |
| BlnI | CCTAGG | 1 cut(s) | 1049 |
| BlsI | GCNGC | 9 cut(s) | 61, 149, 543, 682, 685, 699, 1201, 2151, 2459 |
| Bme1390I | CCNGG | 7 cut(s) | 20, 483, 1105, 1131, 1537, 1727, 2514 |
| Bme18I | GGWCC | 4 cut(s) | 478, 634, 868, 1054 |
| BmrFI | CCNGG | 7 cut(s) | 20, 483, 1105, 1131, 1537, 1727, 2514 |
| BmrI | ACTGGG | 1 cut(s) | 1727 |
| BmsI | GCATC | 8 cut(s) | 97, 118, 495, 1167, 1296, 1840, 1942, 2040 |
| BmuI | ACTGGG | 1 cut(s) | 1727 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1310 |
| BpiI | GAAGAC | 1 cut(s) | 1306 |
| BpmI | CTGGAG | 3 cut(s) | 1152, 1475, 1941 |
| Bpu10I | CCTNAGC | 1 cut(s) | 470 |
| Bpu14I | TTCGAA | 2 cut(s) | 1564, 1984 |
| BpuEI | CTTGAG | 1 cut(s) | 1058 |
| BpuMI | CCSGG | 2 cut(s) | 20, 1727 |
| BsaI | GGTCTC | 1 cut(s) | 1931 |
| BsaWI | WCCGGW | 1 cut(s) | 1432 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1707, 1737 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 332, 590, 1228, 1733, 2369 |
| Bse118I | RCCGGY | 2 cut(s) | 1432, 2037 |
| Bse3DI | GCAATG | 4 cut(s) | 785, 897, 1586, 2437 |
| BseBI | CCWGG | 5 cut(s) | 483, 1105, 1131, 1537, 2514 |
| BseGI | GGATG | 7 cut(s) | 429, 1287, 1735, 1829, 2052, 2224, 2294 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 332, 590, 1228, 1733, 2369 |
| BseMI | GCAATG | 4 cut(s) | 785, 897, 1586, 2437 |
| BseMII | CTCAG | 3 cut(s) | 825, 1497, 1863 |
| BseRI | GAGGAG | 4 cut(s) | 1017, 1889, 2052, 2159 |
| BseSI | GKGCMC | 1 cut(s) | 803 |
| BseX3I | CGGCCG | 1 cut(s) | 2035 |
| BseXI | GCAGC | 7 cut(s) | 553, 692, 695, 709, 1186, 2161, 2444 |
| BsgI | GTGCAG | 3 cut(s) | 161, 560, 716 |
| Bsh1236I | CGCG | 1 cut(s) | 916 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2038 |
| BshFI | GGCC | 8 cut(s) | 96, 150, 250, 424, 594, 801, 1765, 2037 |
| BshTI | ACCGGT | 1 cut(s) | 1432 |
| BsiEI | CGRYCG | 1 cut(s) | 2038 |
| BsiHKAI | GWGCWC | 3 cut(s) | 27, 396, 1752 |
| BsiSI | CCGG | 4 cut(s) | 19, 1433, 1727, 2038 |
| BslFI | GGGAC | 6 cut(s) | 464, 881, 1067, 1734, 2298, 2450 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 332, 590, 1228, 1733, 2369 |
| BsmAI | GTCTC | 1 cut(s) | 1931 |
| BsmFI | GGGAC | 6 cut(s) | 464, 881, 1067, 1734, 2298, 2450 |
| BsmI | GAATGC | 3 cut(s) | 512, 1276, 1548 |
| BsnI | GGCC | 8 cut(s) | 96, 150, 250, 424, 594, 801, 1765, 2037 |
| Bso31I | GGTCTC | 1 cut(s) | 1931 |
| Bsp119I | TTCGAA | 2 cut(s) | 1564, 1984 |
| Bsp120I | GGGCCC | 1 cut(s) | 799 |
| Bsp1286I | GDGCHC | 4 cut(s) | 27, 396, 803, 1752 |
| Bsp1407I | TGTACA | 1 cut(s) | 1461 |
| Bsp19I | CCATGG | 3 cut(s) | 687, 716, 961 |
| BspACI | CCGC | 9 cut(s) | 60, 147, 496, 966, 1182, 1274, 1451, 2298, 2476 |
| BspANI | GGCC | 8 cut(s) | 96, 150, 250, 424, 594, 801, 1765, 2037 |
| BspCNI | CTCAG | 3 cut(s) | 826, 1496, 1864 |
| BspFNI | CGCG | 1 cut(s) | 916 |
| BspHI | TCATGA | 1 cut(s) | 319 |
| BspMI | ACCTGC | 3 cut(s) | 159, 1275, 1673 |
| BspPI | GGATC | 7 cut(s) | 728, 743, 943, 1888, 1921, 2170, 2354 |
| BspQI | GCTCTTC | 1 cut(s) | 1640 |
| BspT104I | TTCGAA | 2 cut(s) | 1564, 1984 |
| BspTNI | GGTCTC | 1 cut(s) | 1931 |
| BsrBI | CCGCTC | 1 cut(s) | 498 |
| BsrDI | GCAATG | 4 cut(s) | 785, 897, 1586, 2437 |
| BsrFI | RCCGGY | 2 cut(s) | 1432, 2037 |
| BsrGI | TGTACA | 1 cut(s) | 1461 |
| BssAI | RCCGGY | 2 cut(s) | 1432, 2037 |
| BssT1I | CCWWGG | 5 cut(s) | 687, 716, 961, 1049, 1783 |
| Bst2UI | CCWGG | 5 cut(s) | 483, 1105, 1131, 1537, 2514 |
| Bst4CI | ACNGT | 5 cut(s) | 1240, 1309, 1372, 2185, 2378 |
| Bst6I | CTCTTC | 1 cut(s) | 1640 |
| BstAUI | TGTACA | 1 cut(s) | 1461 |
| BstBI | TTCGAA | 2 cut(s) | 1564, 1984 |
| BstC8I | GCNNGC | 8 cut(s) | 642, 731, 1182, 1546, 2039, 2154, 2350, 2371 |
| BstDEI | CTNAG | 6 cut(s) | 470, 834, 1483, 1657, 1872, 2418 |
| BstDSI | CCRYGG | 6 cut(s) | 97, 448, 687, 716, 961, 1308 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 330 |
| BstF5I | GGATG | 7 cut(s) | 429, 1287, 1735, 1829, 2052, 2224, 2294 |
| BstFNI | CGCG | 1 cut(s) | 916 |
| BstHHI | GCGC | 2 cut(s) | 916, 1151 |
| BstMAI | GTCTC | 1 cut(s) | 1931 |
| BstMCI | CGRYCG | 1 cut(s) | 2038 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 689, 2158 |
| BstNI | CCWGG | 5 cut(s) | 483, 1105, 1131, 1537, 2514 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1310 |
| BstSCI | CCNGG | 7 cut(s) | 18, 481, 1103, 1129, 1535, 1725, 2512 |
| BstSFI | CTRYAG | 1 cut(s) | 646 |
| BstSLI | GKGCMC | 1 cut(s) | 803 |
| BstUI | CGCG | 1 cut(s) | 916 |
| BstV1I | GCAGC | 7 cut(s) | 553, 692, 695, 709, 1186, 2161, 2444 |
| BstV2I | GAAGAC | 1 cut(s) | 1306 |
| BstX2I | RGATCY | 3 cut(s) | 935, 2102, 2175 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 246, 604, 828, 1717 |
| BstYI | RGATCY | 3 cut(s) | 935, 2102, 2175 |
| BstZI | CGGCCG | 1 cut(s) | 2035 |
| BsuRI | GGCC | 8 cut(s) | 96, 150, 250, 424, 594, 801, 1765, 2037 |
| BtgI | CCRYGG | 6 cut(s) | 97, 448, 687, 716, 961, 1308 |
| BtsCI | GGATG | 7 cut(s) | 429, 1287, 1735, 1829, 2052, 2224, 2294 |
| BtsI | GCAGTG | 1 cut(s) | 699 |
| BtsIMutI | CAGTG | 9 cut(s) | 144, 173, 699, 1514, 1715, 1794, 1802, 1869, 2041 |
| BveI | ACCTGC | 3 cut(s) | 159, 1275, 1673 |
| Cac8I | GCNNGC | 8 cut(s) | 642, 731, 1182, 1546, 2039, 2154, 2350, 2371 |
| CciI | TCATGA | 1 cut(s) | 319 |
| CfoI | GCGC | 2 cut(s) | 916, 1151 |
| Cfr10I | RCCGGY | 2 cut(s) | 1432, 2037 |
| CseI | GACGC | 1 cut(s) | 749 |
| CspAI | ACCGGT | 1 cut(s) | 1432 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1492, 1512, 1527, 1547 |
| DdeI | CTNAG | 6 cut(s) | 470, 834, 1483, 1657, 1872, 2418 |
| EaeI | YGGCCR | 2 cut(s) | 94, 2035 |
| EagI | CGGCCG | 1 cut(s) | 2035 |
| Eam1104I | CTCTTC | 1 cut(s) | 1640 |
| EarI | CTCTTC | 1 cut(s) | 1640 |
| EciI | GGCGGA | 2 cut(s) | 981, 2287 |
| EclXI | CGGCCG | 1 cut(s) | 2035 |
| Eco130I | CCWWGG | 5 cut(s) | 687, 716, 961, 1049, 1783 |
| Eco24I | GRGCYC | 1 cut(s) | 803 |
| Eco31I | GGTCTC | 1 cut(s) | 1931 |
| Eco47I | GGWCC | 4 cut(s) | 478, 634, 868, 1054 |
| Eco52I | CGGCCG | 1 cut(s) | 2035 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 330 |
| EcoO109I | RGGNCCY | 5 cut(s) | 478, 593, 868, 1054, 1763 |
| EcoRII | CCWGG | 5 cut(s) | 481, 1103, 1129, 1535, 2512 |
| EcoT14I | CCWWGG | 5 cut(s) | 687, 716, 961, 1049, 1783 |
| EcoT22I | ATGCAT | 1 cut(s) | 1588 |
| EcoT38I | GRGCYC | 1 cut(s) | 803 |
| ErhI | CCWWGG | 5 cut(s) | 687, 716, 961, 1049, 1783 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1931, 1963 |
| FaqI | GGGAC | 6 cut(s) | 464, 881, 1067, 1734, 2298, 2450 |
| FauI | CCCGC | 1 cut(s) | 1189 |
| FauNDI | CATATG | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 9 cut(s) | 60, 148, 542, 681, 684, 698, 1200, 2150, 2458 |
| FokI | GGATG | 7 cut(s) | 416, 1274, 1742, 1836, 2059, 2211, 2281 |
| FriOI | GRGCYC | 1 cut(s) | 803 |
| Fsp4HI | GCNGC | 9 cut(s) | 60, 148, 542, 681, 684, 698, 1200, 2150, 2458 |
| FspBI | CTAG | 3 cut(s) | 1050, 1350, 1506 |
| GlaI | GCGC | 2 cut(s) | 915, 1150 |
| GluI | GCNGC | 9 cut(s) | 60, 148, 542, 681, 684, 698, 1200, 2150, 2458 |
| GsuI | CTGGAG | 3 cut(s) | 1152, 1475, 1941 |
| HaeIII | GGCC | 8 cut(s) | 96, 150, 250, 424, 594, 801, 1765, 2037 |
| HapII | CCGG | 4 cut(s) | 19, 1433, 1727, 2038 |
| HgaI | GACGC | 1 cut(s) | 749 |
| HhaI | GCGC | 2 cut(s) | 916, 1151 |
| Hin6I | GCGC | 2 cut(s) | 914, 1149 |
| HinP1I | GCGC | 2 cut(s) | 914, 1149 |
| HincII | GTYRAC | 3 cut(s) | 1603, 1690, 2188 |
| HindII | GTYRAC | 3 cut(s) | 1603, 1690, 2188 |
| HindIII | AAGCTT | 2 cut(s) | 1856, 2350 |
| HinfI | GANTC | 7 cut(s) | 124, 130, 456, 1066, 1134, 1519, 1722 |
| HpaII | CCGG | 4 cut(s) | 19, 1433, 1727, 2038 |
| HphI | GGTGA | 3 cut(s) | 379, 1061, 2369 |
| Hpy99I | CGWCG | 1 cut(s) | 1022 |
| HpyCH4III | ACNGT | 5 cut(s) | 1240, 1309, 1372, 2185, 2378 |
| HpyCH4IV | ACGT | 1 cut(s) | 2388 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 689, 2158 |
| HpyF3I | CTNAG | 6 cut(s) | 470, 834, 1483, 1657, 1872, 2418 |
| HpySE526I | ACGT | 1 cut(s) | 2388 |
| HspAI | GCGC | 2 cut(s) | 914, 1149 |
| KflI | GGGWCCC | 2 cut(s) | 868, 1054 |
| KroI | GCCGGC | 1 cut(s) | 2037 |
| KroNI | GCCGGC | 1 cut(s) | 2039 |
| LguI | GCTCTTC | 1 cut(s) | 1640 |
| Lsp1109I | GCAGC | 7 cut(s) | 553, 692, 695, 709, 1186, 2161, 2444 |
| LweI | GCATC | 8 cut(s) | 97, 118, 495, 1167, 1296, 1840, 1942, 2040 |
| MaeI | CTAG | 3 cut(s) | 1050, 1350, 1506 |
| MaeII | ACGT | 1 cut(s) | 2388 |
| MaeIII | GTNAC | 3 cut(s) | 154, 171, 1067 |
| MbiI | CCGCTC | 1 cut(s) | 498 |
| MboII | GAAGA | 7 cut(s) | 104, 993, 1306, 1405, 1553, 1657, 2503 |
| MfeI | CAATTG | 2 cut(s) | 63, 1329 |
| MflI | RGATCY | 3 cut(s) | 935, 2102, 2175 |
| MhlI | GDGCHC | 4 cut(s) | 27, 396, 803, 1752 |
| MlsI | TGGCCA | 1 cut(s) | 96 |
| MluCI | AATT | 8 cut(s) | 39, 63, 343, 612, 973, 1329, 1345, 1566 |
| MluNI | TGGCCA | 1 cut(s) | 96 |
| MlyI | GAGTC | 4 cut(s) | 450, 1075, 1143, 1716 |
| MmeI | TCCRAC | 3 cut(s) | 1226, 1469, 2293 |
| Mox20I | TGGCCA | 1 cut(s) | 96 |
| Mph1103I | ATGCAT | 1 cut(s) | 1588 |
| MroNI | GCCGGC | 1 cut(s) | 2037 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1410, 1857 |
| MscI | TGGCCA | 1 cut(s) | 96 |
| MseI | TTAA | 4 cut(s) | 378, 759, 2019, 2472 |
| MslI | CAYNNNNRTG | 2 cut(s) | 692, 1755 |
| Msp20I | TGGCCA | 1 cut(s) | 96 |
| MspA1I | CMGCKG | 4 cut(s) | 544, 1453, 2369, 2457 |
| MspI | CCGG | 4 cut(s) | 19, 1433, 1727, 2038 |
| MspR9I | CCNGG | 7 cut(s) | 20, 483, 1105, 1131, 1537, 1727, 2514 |
| MunI | CAATTG | 2 cut(s) | 63, 1329 |
| Mva1269I | GAATGC | 3 cut(s) | 512, 1276, 1548 |
| MvaI | CCWGG | 5 cut(s) | 483, 1105, 1131, 1537, 2514 |
| MvnI | CGCG | 1 cut(s) | 916 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 689, 2158 |
| NaeI | GCCGGC | 1 cut(s) | 2039 |
| NciI | CCSGG | 2 cut(s) | 20, 1727 |
| NcoI | CCATGG | 3 cut(s) | 687, 716, 961 |
| NdeI | CATATG | 1 cut(s) | 160 |
| NgoMIV | GCCGGC | 1 cut(s) | 2037 |
| NmuCI | GTSAC | 3 cut(s) | 154, 171, 1067 |
| NsiI | ATGCAT | 1 cut(s) | 1588 |
| NspV | TTCGAA | 2 cut(s) | 1564, 1984 |
| PagI | TCATGA | 1 cut(s) | 319 |
| PaqCI | CACCTGC | 1 cut(s) | 1673 |
| PciSI | GCTCTTC | 1 cut(s) | 1640 |
| PctI | GAATGC | 3 cut(s) | 512, 1276, 1548 |
| PdiI | GCCGGC | 1 cut(s) | 2039 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1410, 1857 |
| PfeI | GAWTC | 3 cut(s) | 124, 130, 1519 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2369 |
| PfoI | TCCNGGA | 3 cut(s) | 1103, 1129, 1725 |
| PinAI | ACCGGT | 1 cut(s) | 1432 |
| PkrI | GCNGC | 9 cut(s) | 61, 149, 543, 682, 685, 699, 1201, 2151, 2459 |
| PleI | GAGTC | 4 cut(s) | 450, 1074, 1142, 1716 |
| PpsI | GAGTC | 4 cut(s) | 450, 1074, 1142, 1716 |
| PpuMI | RGGWCCY | 3 cut(s) | 478, 868, 1054 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1310 |
| PshBI | ATTAAT | 1 cut(s) | 759 |
| Psp5II | RGGWCCY | 3 cut(s) | 478, 868, 1054 |
| Psp6I | CCWGG | 5 cut(s) | 481, 1103, 1129, 1535, 2512 |
| PspGI | CCWGG | 5 cut(s) | 481, 1103, 1129, 1535, 2512 |
| PspOMI | GGGCCC | 1 cut(s) | 799 |
| PspPPI | RGGWCCY | 3 cut(s) | 478, 868, 1054 |
| PsuI | RGATCY | 3 cut(s) | 935, 2102, 2175 |
| PvuII | CAGCTG | 3 cut(s) | 544, 2369, 2457 |
| RseI | CAYNNNNRTG | 2 cut(s) | 692, 1755 |
| SapI | GCTCTTC | 1 cut(s) | 1640 |
| SaqAI | TTAA | 4 cut(s) | 378, 759, 2019, 2472 |
| SatI | GCNGC | 9 cut(s) | 60, 148, 542, 681, 684, 698, 1200, 2150, 2458 |
| SchI | GAGTC | 4 cut(s) | 450, 1075, 1143, 1716 |
| ScrFI | CCNGG | 7 cut(s) | 20, 483, 1105, 1131, 1537, 1727, 2514 |
| SduI | GDGCHC | 4 cut(s) | 27, 396, 803, 1752 |
| SfaNI | GCATC | 8 cut(s) | 97, 118, 495, 1167, 1296, 1840, 1942, 2040 |
| SfcI | CTRYAG | 1 cut(s) | 646 |
| SfuI | TTCGAA | 2 cut(s) | 1564, 1984 |
| SinI | GGWCC | 4 cut(s) | 478, 634, 868, 1054 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 692, 1755 |
| SmlI | CTYRAG | 1 cut(s) | 1073 |
| SmoI | CTYRAG | 1 cut(s) | 1073 |
| Sse9I | AATT | 8 cut(s) | 39, 63, 343, 612, 973, 1329, 1345, 1566 |
| SsiI | CCGC | 9 cut(s) | 60, 147, 496, 966, 1182, 1274, 1451, 2298, 2476 |
| SspI | AATATT | 1 cut(s) | 2128 |
| SspMI | CTAG | 3 cut(s) | 1050, 1350, 1506 |
| StyD4I | CCNGG | 7 cut(s) | 18, 481, 1103, 1129, 1535, 1725, 2512 |
| StyI | CCWWGG | 5 cut(s) | 687, 716, 961, 1049, 1783 |
| TaaI | ACNGT | 5 cut(s) | 1240, 1309, 1372, 2185, 2378 |
| TaiI | ACGT | 1 cut(s) | 2391 |
| TaqI | TCGA | 4 cut(s) | 229, 1032, 1564, 1984 |
| TasI | AATT | 8 cut(s) | 39, 63, 343, 612, 973, 1329, 1345, 1566 |
| TatI | WGTACW | 2 cut(s) | 339, 1461 |
| TauI | GCSGC | 2 cut(s) | 62, 150 |
| TfiI | GAWTC | 3 cut(s) | 124, 130, 1519 |
| Tru1I | TTAA | 4 cut(s) | 378, 759, 2019, 2472 |
| Tru9I | TTAA | 4 cut(s) | 378, 759, 2019, 2472 |
| TscAI | CASTG | 9 cut(s) | 144, 180, 699, 1521, 1722, 1801, 1809, 1876, 2048 |
| TseFI | GTSAC | 3 cut(s) | 154, 171, 1067 |
| TseI | GCWGC | 7 cut(s) | 541, 680, 683, 697, 1199, 2149, 2457 |
| Tsp45I | GTSAC | 3 cut(s) | 154, 171, 1067 |
| TspDTI | ATGAA | 9 cut(s) | 104, 308, 364, 418, 636, 784, 1050, 2098, 2200 |
| TspGWI | ACGGA | 7 cut(s) | 114, 411, 465, 786, 1244, 1836, 2452 |
| TspRI | CASTG | 9 cut(s) | 144, 180, 699, 1521, 1722, 1801, 1809, 1876, 2048 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2369 |
| VpaK11BI | GGWCC | 4 cut(s) | 478, 634, 868, 1054 |
| VspI | ATTAAT | 1 cut(s) | 759 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 330 |
| XapI | RAATTY | 1 cut(s) | 973 |
| XmaJI | CCTAGG | 1 cut(s) | 1049 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1410, 1857 |
| XspI | CTAG | 3 cut(s) | 1050, 1350, 1506 |
| Zsp2I | ATGCAT | 1 cut(s) | 1588 |