26S proteasome non-atpase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g16320 FvH4_2g18400 FvH4_3g43980 FvH4_4g33840 FvH4_5g24170 FvH4_5g26770 FvH4_5g26770 FvH4_5g26770 FvH4_5g26770 FvH4_5g26770 FvH4_5g26770 FvH4_6g31070 FvH4_6g34392 FvH4_6g39960 FvH4_6g54252 FvH4_7g14550 |
| rosa_multiflora | Rmu_sc0000493.1_g000079 |
| rosa_roxburghii | Rroxscaffold_156G00440260 Rroxscaffold_1G00012010 Rroxscaffold_3G00245190 Rroxscaffold_5G00364260 Rroxscaffold_6G00394000 |
| rosa_rugosa | Rorug02G0526600 Rorug04G0297300 Rorug05G0393500 Rorug06G0196700 |
| rosa_samantha | Rh1BG304600 Rh2CG414500 Rh2CG442900 Rh3AG287600 Rh3DG234900 Rh3DG253000 Rh3DG371300 Rh4BG116300 Rh4BG181700 Rh4BG256900 Rh4BG360600 Rh5CG403100 Rh5CG480500 Rh6DG117000 Rh6DG266300 Rh6DG307200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 121 |
| AciI | CCGC | 1 cut(s) | 56 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 41, 136 |
| AgsI | TTSAA | 2 cut(s) | 52, 90 |
| AjnI | CCWGG | 1 cut(s) | 159 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 182, 214 |
| AluBI | AGCT | 2 cut(s) | 86, 242 |
| AluI | AGCT | 2 cut(s) | 86, 242 |
| AoxI | GGCC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 1 cut(s) | 267 |
| AspS9I | GGNCC | 2 cut(s) | 112, 157 |
| AvaII | GGWCC | 2 cut(s) | 112, 157 |
| BaeGI | GKGCMC | 1 cut(s) | 124 |
| BanI | GGYRCC | 1 cut(s) | 121 |
| BbvI | GCAGC | 1 cut(s) | 279 |
| BccI | CCATC | 1 cut(s) | 177 |
| BceAI | ACGGC | 1 cut(s) | 297 |
| BciT130I | CCWGG | 1 cut(s) | 161 |
| BisI | GCNGC | 2 cut(s) | 57, 268 |
| BlsI | GCNGC | 2 cut(s) | 58, 269 |
| Bme1390I | CCNGG | 1 cut(s) | 161 |
| Bme18I | GGWCC | 2 cut(s) | 112, 157 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 157 |
| BmiI | GGNNCC | 1 cut(s) | 123 |
| BmrFI | CCNGG | 1 cut(s) | 161 |
| BmsI | GCATC | 1 cut(s) | 245 |
| BsaJI | CCNNGG | 1 cut(s) | 135 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 238, 268 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 41, 136 |
| Bse3DI | GCAATG | 1 cut(s) | 210 |
| BseBI | CCWGG | 1 cut(s) | 161 |
| BseDI | CCNNGG | 1 cut(s) | 135 |
| BseGI | GGATG | 1 cut(s) | 188 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 41, 136 |
| BseMI | GCAATG | 1 cut(s) | 210 |
| BseSI | GKGCMC | 1 cut(s) | 124 |
| BseXI | GCAGC | 1 cut(s) | 279 |
| BshFI | GGCC | 1 cut(s) | 164 |
| BshNI | GGYRCC | 1 cut(s) | 121 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 41, 136 |
| BsnI | GGCC | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 1 cut(s) | 124 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 1 cut(s) | 56 |
| BspANI | GGCC | 1 cut(s) | 164 |
| BspLI | GGNNCC | 1 cut(s) | 123 |
| BspT107I | GGYRCC | 1 cut(s) | 121 |
| BsrDI | GCAATG | 1 cut(s) | 210 |
| BssECI | CCNNGG | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 1 cut(s) | 135 |
| Bst2UI | CCWGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 188 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstNI | CCWGG | 1 cut(s) | 161 |
| BstSCI | CCNGG | 1 cut(s) | 159 |
| BstSLI | GKGCMC | 1 cut(s) | 124 |
| BstV1I | GCAGC | 1 cut(s) | 279 |
| BsuRI | GGCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 157 |
| CviJI | RGCY | 5 cut(s) | 86, 128, 164, 242, 270 |
| CviKI_1 | RGCY | 5 cut(s) | 86, 128, 164, 242, 270 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eco130I | CCWWGG | 1 cut(s) | 135 |
| Eco47I | GGWCC | 2 cut(s) | 112, 157 |
| EcoRII | CCWGG | 1 cut(s) | 159 |
| EcoT14I | CCWWGG | 1 cut(s) | 135 |
| ErhI | CCWWGG | 1 cut(s) | 135 |
| FaiI | YATR | 3 cut(s) | 107, 167, 279 |
| Fnu4HI | GCNGC | 2 cut(s) | 57, 268 |
| FokI | GGATG | 1 cut(s) | 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 57, 268 |
| GluI | GCNGC | 2 cut(s) | 57, 268 |
| HaeIII | GGCC | 1 cut(s) | 164 |
| HinfI | GANTC | 2 cut(s) | 48, 140 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 1 cut(s) | 144 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 1 cut(s) | 236 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LpnPI | CCDG | 4 cut(s) | 138, 146, 173, 207 |
| Lsp1109I | GCAGC | 1 cut(s) | 279 |
| LweI | GCATC | 1 cut(s) | 245 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MboII | GAAGA | 5 cut(s) | 16, 19, 29, 86, 199 |
| MhlI | GDGCHC | 1 cut(s) | 124 |
| MnlI | CCTC | 2 cut(s) | 202, 264 |
| MseI | TTAA | 1 cut(s) | 245 |
| MspR9I | CCNGG | 1 cut(s) | 161 |
| MvaI | CCWGG | 1 cut(s) | 161 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIV | GGNNCC | 1 cut(s) | 123 |
| PfeI | GAWTC | 2 cut(s) | 48, 140 |
| PkrI | GCNGC | 2 cut(s) | 58, 269 |
| Psp6I | CCWGG | 1 cut(s) | 159 |
| PspGI | CCWGG | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 1 cut(s) | 123 |
| PspPI | GGNCC | 2 cut(s) | 112, 157 |
| SaqAI | TTAA | 1 cut(s) | 245 |
| SatI | GCNGC | 2 cut(s) | 57, 268 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| Sau96I | GGNCC | 2 cut(s) | 112, 157 |
| ScrFI | CCNGG | 1 cut(s) | 161 |
| SduI | GDGCHC | 1 cut(s) | 124 |
| SetI | ASST | 5 cut(s) | 88, 114, 151, 244, 256 |
| SfaNI | GCATC | 1 cut(s) | 245 |
| SinI | GGWCC | 2 cut(s) | 112, 157 |
| SsiI | CCGC | 1 cut(s) | 56 |
| StyD4I | CCNGG | 1 cut(s) | 159 |
| StyI | CCWWGG | 1 cut(s) | 135 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TauI | GCSGC | 1 cut(s) | 59 |
| TfiI | GAWTC | 2 cut(s) | 48, 140 |
| Tru1I | TTAA | 1 cut(s) | 245 |
| Tru9I | TTAA | 1 cut(s) | 245 |
| TseI | GCWGC | 1 cut(s) | 267 |
| TspDTI | ATGAA | 3 cut(s) | 17, 122, 209 |
| VpaK11BI | GGWCC | 2 cut(s) | 112, 157 |