Rh6DG117000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
15536501 .. 15537020
520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG117000.1

Sequence Viewer

Length: 222 bp
ATGACATGCCAAGTATGCTTCAAAAAAGGGCATAATAGATTGGGCTACCCAATCACAAAGGCAAAGAAAGCAGCAGCACAACAAGCAGGAGAAAGGAGTTCCAATGCAGCCAAGGAAAATAAGAAGAGGTCAAGGCAACAGGCAGCAAAAGTTTCAGCTTCAAAATGGAGGTCCAGCTTGAATGATAATATCATCAAGTCTAGGAAGGTTGGAAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

73

Amino Acids

8.16

Weight (kDa)

11.38

Isoelectric Point (pI)

60.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 22, 162, 181
AluBI AGCT 2 cut(s) 158, 177
AluI AGCT 2 cut(s) 158, 177
ApeKI GCWGC 4 cut(s) 71, 74, 107, 143
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
AspS9I GGNCC 1 cut(s) 171
AvaII GGWCC 1 cut(s) 171
BbvI GCAGC 4 cut(s) 83, 86, 119, 155
BfaI CTAG 1 cut(s) 201
BisI GCNGC 4 cut(s) 72, 75, 108, 144
BlsI GCNGC 4 cut(s) 73, 76, 109, 145
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 171
BsaJI CCNNGG 1 cut(s) 111
BseDI CCNNGG 1 cut(s) 111
BseXI GCAGC 4 cut(s) 83, 86, 119, 155
BssECI CCNNGG 1 cut(s) 111
BssT1I CCWWGG 1 cut(s) 111
Bst6I CTCTTC 1 cut(s) 119
BstMWI GCNNNNNNNGC 3 cut(s) 15, 68, 83
BstNSI RCATGY 1 cut(s) 9
BstV1I GCAGC 4 cut(s) 83, 86, 119, 155
Cfr13I GGNCC 1 cut(s) 171
CviAII CATG 1 cut(s) 6
CviJI RGCY 4 cut(s) 45, 110, 158, 177
CviKI_1 RGCY 4 cut(s) 45, 110, 158, 177
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Eco130I CCWWGG 1 cut(s) 111
Eco47I GGWCC 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 111
ErhI CCWWGG 1 cut(s) 111
FaeI CATG 1 cut(s) 9
FaiI YATR 3 cut(s) 7, 16, 33
FatI CATG 1 cut(s) 5
Fnu4HI GCNGC 4 cut(s) 72, 75, 108, 144
Fsp4HI GCNGC 4 cut(s) 72, 75, 108, 144
FspBI CTAG 1 cut(s) 201
GluI GCNGC 4 cut(s) 72, 75, 108, 144
Hin1II CATG 1 cut(s) 9
HpyAV CCTTC 1 cut(s) 199
HpyCH4V TGCA 1 cut(s) 107
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 68, 83
Hsp92II CATG 1 cut(s) 9
LpnPI CCDG 3 cut(s) 72, 125, 187
Lsp1109I GCAGC 4 cut(s) 83, 86, 119, 155
MaeI CTAG 1 cut(s) 201
MboII GAAGA 1 cut(s) 136
MmeI TCCRAC 1 cut(s) 190
MnlI CCTC 2 cut(s) 120, 162
MwoI GCNNNNNNNGC 3 cut(s) 15, 68, 83
NlaIII CATG 1 cut(s) 9
NspI RCATGY 1 cut(s) 9
PkrI GCNGC 4 cut(s) 73, 76, 109, 145
PspPI GGNCC 1 cut(s) 171
SatI GCNGC 4 cut(s) 72, 75, 108, 144
Sau96I GGNCC 1 cut(s) 171
SetI ASST 5 cut(s) 131, 160, 173, 179, 210
SinI GGWCC 1 cut(s) 171
SspMI CTAG 1 cut(s) 201
StyI CCWWGG 1 cut(s) 111
TseI GCWGC 4 cut(s) 71, 74, 107, 143
VpaK11BI GGWCC 1 cut(s) 171
XceI RCATGY 1 cut(s) 9
XspI CTAG 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.