FvH4_5g04060

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0002270
Physical Location & Seq
Reverse (-)
2415943 .. 2419694
3752 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04060.t1

Sequence Viewer

Length: 2400 bp
ATGGCCGAGGACGGCAGTCCGGTTATTCCGGAGTCGGACCGAGCGGCAGAGGAACTATCCTCCAGAGAAGCGGAGCTCCGGAAAGAGATAGAGCGAGAGAGGCACGAGAAGGCGGTGCTGGAGGAGAGGCACCAGTTCGAGATTCTGGAGAGGCTGAAAGTGAAGGACGAGCTTCAGGAGTACATGGCGGGGGACAAGGAGGTAATTTCCGAGCTGCGGAGCAAGAATGGGGAGCTGGAGAGCCGCATTTCGCGGCTGGAGGAGGGGATTGGTGGGAGAATGTTGAGGAAGGAGAGGCGGCTGGGGGAGAGGAGGAGCCAGCGGCTGGCGAATATCGAGGCCGGAATTAGAGAGCGTGAGACTGAAGATGTGGAGGAGGATGAGGTTGATGTTGATTTTGATTTTGATGGGAGTGGCGGCACGGTGAGTGGTGGGGACTCTTCTCCGCCGCGGCCTGCTCGTAGAGGAAGAGGTCGGCCGCGTAAAATGTCAGGTAATAAGAAGGGGATGAAAAAGACAAGGAAGGATGAGAGTCATGAGACTGAAGATGCAGAGGAGGATGAGGTTGATCTTGATTGTGATGGAAGTGGAAGTGGAAGCAGTGCGAGTGAAGGAGACTCTTCTCCACCACCACCTCCTCCTCCTCCTCCTCATAGAGGAAGAGGTCGGCCGCGTACTAAAAGAAATGCAAATCTGCAAATGTCAGGTAATAAGAAGCAGATGAAAAAGACAAGGAGGAGAAAGAGTGTGAGGAAACAGAAGTATAGAGACGCAGATCATGTACAATACCGATGTAATATGCTGGCGTTCCTCAAAATAATGCAGAAAGTAAAAGAACGCTTGACCAAAAGCCACTTGGAGTTGCTACAGCAAACTCCGTTTTGGCCATTGATATCGGCATTTTACAATGGAATGATTTCTGAAAGTGACTGCAAGAAATCAGAGAGTGACATCAACGACATCATCCGTTGCTACAACTCGAACTCAATGTGTTTTGAGTTTGGTAGCACATCTGCGTCCTTAACGCCAGAGGACATCTCCGTGATTTTGGGGCTGCCACAAGAAGGTGAAACACTAAAGGTAAGAGGGCTTTTTGGAGTCAACAGATACACATCGGATTTTGTTGAAAGATATTTCATGGATGAAAAGAGAGTGAAGAAAACAATGGTGGATGATGGTCTGGATAAAGCATTGCAAGGGAAAAGAGAAACAGATCGGGAGGATGTCGTGCGCCTTATTATACTAGAGTTATTCATCACATTCTTATTCTGCAACGCGGGTAGTACTATTGGATGGAAATTAGTCAGGTGCTGTGAAGAGTTAGAAAACATGTCAAGATATTCATGGGCAAAAGCAGTTGCCGACTTTCTAAGCAGCACATTGGAGAAAACTTGTGGGCAGTACGGACCATATTCTACTGGTGGATGTGTGATTGTCCTATTGTTTTGGTTGTGTGAGAGAACTAATCTTATACAACCAGTTGAAGGAAGGGAGAGACATACACCAGCCCTTATAAAATGGAACATTCAGGAGCTACACTTAAAACTGCAACGAATGAAGGACTTTGAACACCTTGGGCGGAGTTTTGAGGGGGCCAAGGAGAACCATGAGATAAATGGACAAGACAAGGAGGAAGATGGAAAGGGGATAGGAGAAAATGAAGAAACAGAAGAAGAAGATAGAAGAGAAGAAACTGAAACAGATAGAGGCGAAGAAAGTGTTTCTGATGACATAGTGGGTCCATTGGAAGACGAACTTCGAGCTCAAATGTCTCACTTCTGCCAATCTTCTCCTATTTTAACAAGGTTGAACAAAGACAATGAGGACTTGGGAAACAGAAAAGCAAAAGATTTACGGGATAAGGTTCAAAATGCGAGGATGCAAGTTGAAAGAGCTCAAATAAAAGTGGACAGACTAGCTGAAAAATTGGAGAGGAAGAAGAAAAAAGCAACAAGATTAAAGAGAAAACTAAAAGAAGAAAAGAAGGAGAAGAGAAGGCTGGAAGAGGAGAATGAAATCTTAAATGCCGAGAAGAGATCATTGTTCGAGTCTGTGACAACGCTGATGAAAAAGATGGAAGAAACTCTTGATGCTGAAAGGAAAGCGTTGAGGAACCTAGTCAAAGAGAAAGCGGAGGTTATTAAAGAAAACCAACAACTCAAAGATCAGCTCAATCAAGGTAGCCGTACTGCAGCTAAGTTGGGAGACAACATACAAACTCAGGTCTCTCCCGAGCAGTCCCATGTGACAAATCCTGAAAAGAGCATCCAAAAGAGGGCATTAGATCCTGGATTTGATTGTGACAAAGGGCGTGAGAAAAATAGGAAACTAGGAGATGATAAGAATAGAGAAATAGAGGATGTTCAATCTGATGCCATATTTTCAGGCAGTTTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

800

Amino Acids

91.68

Weight (kDa)

6.08

Isoelectric Point (pI)

54.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 324 - 515 1.1e-08 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1514
AccB1I GGYRCC 1 cut(s) 129
AccB7I CCANNNNNTGG 1 cut(s) 325
AccBSI CCGCTC 1 cut(s) 44
AccII CGCG 5 cut(s) 253, 451, 481, 673, 1277
AccIII TCCGGA 2 cut(s) 28, 78
AclWI GGATC 1 cut(s) 2279
AcoI YGGCCR 4 cut(s) 3, 476, 668, 884
AcuI CTGAAG 3 cut(s) 158, 384, 564
AfaI GTAC 6 cut(s) 182, 676, 783, 1285, 1403, 2188
AfiI CCNNNNNNNGG 6 cut(s) 216, 325, 656, 1064, 1484, 2275
AflIII ACRYGT 1 cut(s) 1329
AgsI TTSAA 7 cut(s) 1127, 1484, 1568, 1810, 1868, 1889, 2366
AjnI CCWGG 1 cut(s) 2287
Alw21I GWGCWC 3 cut(s) 78, 1765, 1897
Alw26I GTCTC 8 cut(s) 353, 533, 609, 762, 1489, 1776, 2199, 2230
AlwI GGATC 1 cut(s) 2279
AlwNI CAGNNNCTG 2 cut(s) 325, 1311
Ama87I CYCGRG 1 cut(s) 2231
Aor13HI TCCGGA 2 cut(s) 28, 78
AoxI GGCC 7 cut(s) 3, 339, 452, 476, 668, 884, 1593
ApeKI GCWGC 4 cut(s) 214, 1054, 1374, 2192
Asp700I GAANNNNTTC 1 cut(s) 916
AspLEI GCGC 1 cut(s) 1233
AspS9I GGNCC 4 cut(s) 37, 1406, 1593, 1739
AsuHPI GGTGA 2 cut(s) 436, 1079
AvaI CYCGRG 1 cut(s) 2231
AvaII GGWCC 3 cut(s) 37, 1406, 1739
BalI TGGCCA 1 cut(s) 886
BanI GGYRCC 1 cut(s) 129
BanII GRGCYC 3 cut(s) 78, 1765, 1897
BauI CACGAG 1 cut(s) 104
BbsI GAAGAC 1 cut(s) 1755
Bbv12I GWGCWC 3 cut(s) 78, 1765, 1897
BbvI GCAGC 4 cut(s) 201, 1041, 1386, 2204
BccI CCATC 6 cut(s) 401, 575, 1169, 1287, 1631, 2068
BceAI ACGGC 2 cut(s) 28, 2169
BciT130I CCWGG 1 cut(s) 2289
BcoDI GTCTC 8 cut(s) 353, 533, 609, 762, 1489, 1776, 2199, 2230
BfaI CTAG 4 cut(s) 1244, 1916, 2117, 2330
BfmI CTRYAG 2 cut(s) 866, 2190
BmcAI AGTACT 1 cut(s) 1285
Bme1390I CCNGG 1 cut(s) 2289
Bme18I GGWCC 3 cut(s) 37, 1406, 1739
BmeT110I CYCGRG 1 cut(s) 2231
BmgT120I GGNCC 4 cut(s) 37, 1406, 1593, 1739
BmiI GGNNCC 5 cut(s) 131, 317, 1594, 1740, 2114
BmrFI CCNGG 1 cut(s) 2289
BmsI GCATC 5 cut(s) 538, 1869, 2080, 2274, 2362
BoxI GACNNNNGTC 1 cut(s) 15
BpiI GAAGAC 1 cut(s) 1755
BplI GAGNNNNNCTC 2 cut(s) 1022, 1054
BpmI CTGGAG 5 cut(s) 46, 140, 167, 257, 278
BsaBI GATNNNNATC 1 cut(s) 1111
BsaI GGTCTC 1 cut(s) 2230
BsaJI CCNNGG 4 cut(s) 6, 449, 1573, 1596
BsaWI WCCGGW 3 cut(s) 19, 28, 78
BsaXI ACNNNNNCTCC 2 cut(s) 730, 760
Bsc4I CCNNNNNNNGG 6 cut(s) 216, 325, 656, 1064, 1484, 2275
Bse1I ACTGG 3 cut(s) 133, 1423, 1478
Bse3DI GCAATG 1 cut(s) 1190
Bse8I GATNNNNATC 1 cut(s) 1111
BseAI TCCGGA 2 cut(s) 28, 78
BseBI CCWGG 1 cut(s) 2289
BseDI CCNNGG 4 cut(s) 6, 449, 1573, 1596
BseJI GATNNNNATC 1 cut(s) 1111
BseLI CCNNNNNNNGG 6 cut(s) 216, 325, 656, 1064, 1484, 2275
BseMI GCAATG 1 cut(s) 1190
BseMII CTCAG 1 cut(s) 2234
BseNI ACTGG 3 cut(s) 133, 1423, 1478
BseX3I CGGCCG 2 cut(s) 476, 668
BseXI GCAGC 4 cut(s) 201, 1041, 1386, 2204
BseYI CCCAGC 1 cut(s) 301
Bsh1236I CGCG 5 cut(s) 253, 451, 481, 673, 1277
Bsh1285I CGRYCG 2 cut(s) 479, 671
BshFI GGCC 7 cut(s) 5, 341, 454, 478, 670, 886, 1595
BshNI GGYRCC 1 cut(s) 129
BsiEI CGRYCG 2 cut(s) 479, 671
BsiHKAI GWGCWC 3 cut(s) 78, 1765, 1897
BsiHKCI CYCGRG 1 cut(s) 2231
BsiSI CCGG 4 cut(s) 20, 29, 79, 342
BslFI GGGAC 3 cut(s) 206, 449, 2224
BslI CCNNNNNNNGG 6 cut(s) 216, 325, 656, 1064, 1484, 2275
BsmAI GTCTC 8 cut(s) 353, 533, 609, 762, 1489, 1776, 2199, 2230
BsmBI CGTCTC 1 cut(s) 762
BsmFI GGGAC 3 cut(s) 206, 449, 2224
BsnI GGCC 7 cut(s) 5, 341, 454, 478, 670, 886, 1595
Bso31I GGTCTC 1 cut(s) 2230
BsoBI CYCGRG 1 cut(s) 2231
Bsp1286I GDGCHC 3 cut(s) 78, 1765, 1897
Bsp13I TCCGGA 2 cut(s) 28, 78
Bsp1407I TGTACA 1 cut(s) 781
Bsp143I GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
BspANI GGCC 7 cut(s) 5, 341, 454, 478, 670, 886, 1595
BspCNI CTCAG 1 cut(s) 2233
BspEI TCCGGA 2 cut(s) 28, 78
BspFNI CGCG 5 cut(s) 253, 451, 481, 673, 1277
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 5 cut(s) 131, 317, 1594, 1740, 2114
BspMAI CTGCAG 1 cut(s) 2194
BspPI GGATC 1 cut(s) 2279
BspT107I GGYRCC 1 cut(s) 129
BspTNI GGTCTC 1 cut(s) 2230
BsrBI CCGCTC 1 cut(s) 44
BsrDI GCAATG 1 cut(s) 1190
BsrGI TGTACA 1 cut(s) 781
BsrI ACTGG 3 cut(s) 133, 1423, 1478
BssECI CCNNGG 4 cut(s) 6, 449, 1573, 1596
BssMI GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
BssSI CACGAG 1 cut(s) 104
BssT1I CCWWGG 2 cut(s) 1573, 1596
Bst2BI CACGAG 1 cut(s) 104
Bst2UI CCWGG 1 cut(s) 2289
Bst4CI ACNGT 1 cut(s) 424
Bst6I CTCTTC 9 cut(s) 445, 463, 625, 655, 1311, 1678, 1985, 1998, 2027
BstAUI TGTACA 1 cut(s) 781
BstC8I GCNNGC 4 cut(s) 320, 327, 456, 804
BstDEI CTNAG 3 cut(s) 1370, 2196, 2220
BstDSI CCRYGG 1 cut(s) 449
BstENI CCTNNNNNAGG 1 cut(s) 654
BstFNI CGCG 5 cut(s) 253, 451, 481, 673, 1277
BstHHI GCGC 1 cut(s) 1233
BstKTI GATC 6 cut(s) 571, 778, 1216, 2039, 2167, 2287
BstMAI GTCTC 8 cut(s) 353, 533, 609, 762, 1489, 1776, 2199, 2230
BstMBI GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
BstMCI CGRYCG 2 cut(s) 479, 671
BstMWI GCNNNNNNNGC 1 cut(s) 100
BstNI CCWGG 1 cut(s) 2289
BstNSI RCATGY 1 cut(s) 1333
BstPAI GACNNNNGTC 1 cut(s) 15
BstSCI CCNGG 1 cut(s) 2287
BstSFI CTRYAG 2 cut(s) 866, 2190
BstUI CGCG 5 cut(s) 253, 451, 481, 673, 1277
BstV1I GCAGC 4 cut(s) 201, 1041, 1386, 2204
BstV2I GAAGAC 1 cut(s) 1755
BstX2I RGATCY 1 cut(s) 2284
BstYI RGATCY 1 cut(s) 2284
BstZI CGGCCG 2 cut(s) 476, 668
BsuRI GGCC 7 cut(s) 5, 341, 454, 478, 670, 886, 1595
BtgI CCRYGG 1 cut(s) 449
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 1 cut(s) 607
Cac8I GCNNGC 4 cut(s) 320, 327, 456, 804
CaiI CAGNNNCTG 2 cut(s) 325, 1311
CciI TCATGA 1 cut(s) 535
CfoI GCGC 1 cut(s) 1233
Cfr13I GGNCC 4 cut(s) 37, 1406, 1593, 1739
Cfr42I CCGCGG 1 cut(s) 452
CpoI CGGWCCG 1 cut(s) 37
CseI GACGC 2 cut(s) 779, 1005
Csp6I GTAC 6 cut(s) 181, 675, 782, 1284, 1402, 2187
CspI CGGWCCG 1 cut(s) 37
CviAII CATG 8 cut(s) 184, 536, 779, 1138, 1330, 1344, 1607, 2243
CviQI GTAC 6 cut(s) 181, 675, 782, 1284, 1402, 2187
DdeI CTNAG 3 cut(s) 1370, 2196, 2220
DpnI GATC 6 cut(s) 570, 777, 1215, 2038, 2166, 2286
DpnII GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
EaeI YGGCCR 4 cut(s) 3, 476, 668, 884
EagI CGGCCG 2 cut(s) 476, 668
Eam1104I CTCTTC 9 cut(s) 445, 463, 625, 655, 1311, 1678, 1985, 1998, 2027
EarI CTCTTC 9 cut(s) 445, 463, 625, 655, 1311, 1678, 1985, 1998, 2027
EciI GGCGGA 2 cut(s) 435, 1594
Ecl136II GAGCTC 3 cut(s) 76, 1763, 1895
EclXI CGGCCG 2 cut(s) 476, 668
Eco130I CCWWGG 2 cut(s) 1573, 1596
Eco24I GRGCYC 3 cut(s) 78, 1765, 1897
Eco31I GGTCTC 1 cut(s) 2230
Eco32I GATATC 1 cut(s) 894
Eco47I GGWCC 3 cut(s) 37, 1406, 1739
Eco52I CGGCCG 2 cut(s) 476, 668
Eco53kI GAGCTC 3 cut(s) 76, 1763, 1895
Eco57I CTGAAG 3 cut(s) 158, 384, 564
Eco88I CYCGRG 1 cut(s) 2231
EcoICRI GAGCTC 3 cut(s) 76, 1763, 1895
EcoNI CCTNNNNNAGG 1 cut(s) 654
EcoRII CCWGG 1 cut(s) 2287
EcoRV GATATC 1 cut(s) 894
EcoT14I CCWWGG 2 cut(s) 1573, 1596
EcoT38I GRGCYC 3 cut(s) 78, 1765, 1897
ErhI CCWWGG 2 cut(s) 1573, 1596
Esp3I CGTCTC 1 cut(s) 762
FaeI CATG 8 cut(s) 187, 539, 782, 1141, 1333, 1347, 1610, 2246
FalI AAGNNNNNCTT 4 cut(s) 1740, 1772, 2070, 2102
FaqI GGGAC 3 cut(s) 206, 449, 2224
FatI CATG 8 cut(s) 183, 535, 778, 1137, 1329, 1343, 1606, 2242
FauI CCCGC 2 cut(s) 181, 1270
FriOI GRGCYC 3 cut(s) 78, 1765, 1897
FspBI CTAG 4 cut(s) 1244, 1916, 2117, 2330
GlaI GCGC 1 cut(s) 1232
GsaI CCCAGC 1 cut(s) 305
GsuI CTGGAG 5 cut(s) 46, 140, 167, 257, 278
HaeIII GGCC 7 cut(s) 5, 341, 454, 478, 670, 886, 1595
HapII CCGG 4 cut(s) 20, 29, 79, 342
HgaI GACGC 2 cut(s) 779, 1005
HhaI GCGC 1 cut(s) 1233
Hin1II CATG 8 cut(s) 187, 539, 782, 1141, 1333, 1347, 1610, 2246
Hin6I GCGC 1 cut(s) 1231
HinP1I GCGC 1 cut(s) 1231
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HinfI GANTC 7 cut(s) 32, 142, 437, 532, 617, 1098, 2048
HpaII CCGG 4 cut(s) 20, 29, 79, 342
HphI GGTGA 2 cut(s) 436, 1079
Hpy166II GTNNAC 2 cut(s) 1102, 1909
Hpy188I TCNGA 8 cut(s) 37, 211, 922, 943, 1117, 1726, 2371, 2396
Hpy8I GTNNAC 2 cut(s) 1102, 1909
HpyCH4III ACNGT 1 cut(s) 424
HpyF10VI GCNNNNNNNGC 1 cut(s) 100
HpyF3I CTNAG 3 cut(s) 1370, 2196, 2220
Hsp92II CATG 8 cut(s) 187, 539, 782, 1141, 1333, 1347, 1610, 2246
HspAI GCGC 1 cut(s) 1231
Kpn2I TCCGGA 2 cut(s) 28, 78
KspI CCGCGG 1 cut(s) 452
Kzo9I GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
LmnI GCTCC 6 cut(s) 73, 81, 219, 232, 315, 1531
Lsp1109I GCAGC 4 cut(s) 201, 1041, 1386, 2204
LweI GCATC 5 cut(s) 538, 1869, 2080, 2274, 2362
MaeI CTAG 4 cut(s) 1244, 1916, 2117, 2330
MaeIII GTNAC 5 cut(s) 926, 947, 2053, 2245, 2300
MalI GATC 6 cut(s) 570, 777, 1215, 2038, 2166, 2286
MbiI CCGCTC 1 cut(s) 44
MboI GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
MflI RGATCY 1 cut(s) 2284
MhlI GDGCHC 3 cut(s) 78, 1765, 1897
MlsI TGGCCA 1 cut(s) 886
MluCI AATT 4 cut(s) 204, 345, 1298, 1925
MluNI TGGCCA 1 cut(s) 886
MlyI GAGTC 6 cut(s) 41, 431, 541, 611, 1107, 2057
MmeI TCCRAC 1 cut(s) 15
Mox20I TGGCCA 1 cut(s) 886
MroI TCCGGA 2 cut(s) 28, 78
MroXI GAANNNNTTC 1 cut(s) 916
MscI TGGCCA 1 cut(s) 886
MseI TTAA 6 cut(s) 1022, 1541, 1799, 1958, 2021, 2142
MslI CAYNNNNRTG 1 cut(s) 1040
Msp20I TGGCCA 1 cut(s) 886
MspA1I CMGCKG 2 cut(s) 322, 451
MspI CCGG 4 cut(s) 20, 29, 79, 342
MspR9I CCNGG 1 cut(s) 2289
MvaI CCWGG 1 cut(s) 2289
MvnI CGCG 5 cut(s) 253, 451, 481, 673, 1277
MwoI GCNNNNNNNGC 1 cut(s) 100
NdeII GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
NlaIII CATG 8 cut(s) 187, 539, 782, 1141, 1333, 1347, 1610, 2246
NlaIV GGNNCC 5 cut(s) 131, 317, 1594, 1740, 2114
NmeAIII GCCGAG 2 cut(s) 31, 2053
NmuCI GTSAC 5 cut(s) 926, 947, 2053, 2245, 2300
NspI RCATGY 1 cut(s) 1333
PagI TCATGA 1 cut(s) 535
PciI ACATGT 1 cut(s) 1329
PdmI GAANNNNTTC 1 cut(s) 916
PfeI GAWTC 1 cut(s) 142
PflMI CCANNNNNTGG 1 cut(s) 325
PfoI TCCNGGA 1 cut(s) 2287
PleI GAGTC 6 cut(s) 40, 431, 540, 611, 1106, 2056
PpsI GAGTC 6 cut(s) 40, 431, 540, 611, 1106, 2056
PscI ACATGT 1 cut(s) 1329
PshAI GACNNNNGTC 1 cut(s) 15
PsiI TTATAA 1 cut(s) 1514
Psp124BI GAGCTC 3 cut(s) 78, 1765, 1897
Psp6I CCWGG 1 cut(s) 2287
PspFI CCCAGC 1 cut(s) 301
PspGI CCWGG 1 cut(s) 2287
PspN4I GGNNCC 5 cut(s) 131, 317, 1594, 1740, 2114
PspPI GGNCC 4 cut(s) 37, 1406, 1593, 1739
PstI CTGCAG 1 cut(s) 2194
PstNI CAGNNNCTG 2 cut(s) 325, 1311
PsuI RGATCY 1 cut(s) 2284
RsaI GTAC 6 cut(s) 182, 676, 783, 1285, 1403, 2188
RsaNI GTAC 6 cut(s) 181, 675, 782, 1284, 1402, 2187
RseI CAYNNNNRTG 1 cut(s) 1040
Rsr2I CGGWCCG 1 cut(s) 37
RsrII CGGWCCG 1 cut(s) 37
SacI GAGCTC 3 cut(s) 78, 1765, 1897
SacII CCGCGG 1 cut(s) 452
SaqAI TTAA 6 cut(s) 1022, 1541, 1799, 1958, 2021, 2142
Sau3AI GATC 6 cut(s) 568, 775, 1213, 2036, 2164, 2284
Sau96I GGNCC 4 cut(s) 37, 1406, 1593, 1739
ScaI AGTACT 1 cut(s) 1285
SchI GAGTC 6 cut(s) 41, 431, 541, 611, 1107, 2057
ScrFI CCNGG 1 cut(s) 2289
SduI GDGCHC 3 cut(s) 78, 1765, 1897
SfaNI GCATC 5 cut(s) 538, 1869, 2080, 2274, 2362
SfcI CTRYAG 2 cut(s) 866, 2190
Sfr303I CCGCGG 1 cut(s) 452
SgrBI CCGCGG 1 cut(s) 452
SinI GGWCC 3 cut(s) 37, 1406, 1739
SmiMI CAYNNNNRTG 1 cut(s) 1040
Sse9I AATT 4 cut(s) 204, 345, 1298, 1925
SspMI CTAG 4 cut(s) 1244, 1916, 2117, 2330
SstI GAGCTC 3 cut(s) 78, 1765, 1897
StyD4I CCNGG 1 cut(s) 2287
StyI CCWWGG 2 cut(s) 1573, 1596
TaaI ACNGT 1 cut(s) 424
TaqI TCGA 5 cut(s) 138, 336, 980, 1759, 2046
TaqII GACCGA 1 cut(s) 54
TasI AATT 4 cut(s) 204, 345, 1298, 1925
TatI WGTACW 3 cut(s) 180, 781, 1283
TfiI GAWTC 1 cut(s) 142
Tru1I TTAA 6 cut(s) 1022, 1541, 1799, 1958, 2021, 2142
Tru9I TTAA 6 cut(s) 1022, 1541, 1799, 1958, 2021, 2142
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 5 cut(s) 926, 947, 2053, 2245, 2300
TseI GCWGC 4 cut(s) 214, 1054, 1374, 2192
Tsp45I GTSAC 5 cut(s) 926, 947, 2053, 2245, 2300
TspGWI ACGGA 4 cut(s) 867, 956, 1030, 1419
TspRI CASTG 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 325
VpaK11BI GGWCC 3 cut(s) 37, 1406, 1739
XagI CCTNNNNNAGG 1 cut(s) 654
XceI RCATGY 1 cut(s) 1333
XcmI CCANNNNNNNNNTGG 2 cut(s) 853, 1613
XmnI GAANNNNTTC 1 cut(s) 916
XspI CTAG 4 cut(s) 1244, 1916, 2117, 2330
ZrmI AGTACT 1 cut(s) 1285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.