MD06G1101900.v1.1

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0002270
Physical Location & Seq
Reverse (-)
23861937 .. 23864836
2900 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1101900.v1.1.491

Sequence Viewer

Length: 2166 bp
ATGGTGTTCGGGACACAACTCACCCCTCCTTCTGACGGCCACGACGACGAAACCGAAACCGAAAACCCGACCGTCTCGGACCTGTTTTCGGCGCTGAGAGCGGCGTCTCGGCCGGAGGATTTCGGCCGAGTCGAACAGGCATTATCGGCGAGGGAAGCGAAACTGAGGCGAGAAATCGAGAAGCAGAGGTACGAGAACGCGCTGCTCGACGAGAAGCACGAGTTCGAGCGGCTTGAGAAGCTCAGAGTAGAGGAGGAACTCAGGCTCAAGCTTTCACCGATCAAGGCGGAGGCGGTGAGCGAAGAGAACGGCGGCGAGGGTAGAGAGGTAATTTTGGAGCTCCGGACGCAGAAGGAGGAGCTGGAGCGTCGCATTTCGCGGTTGGAGAAGGGCGGTAAGACATTGAGGAAGAAGGGTTTGAGTAACAGCATCCAGAAGAGAAGGAGTGATCGGTTGGCTGCGATCGGTGGTGATACCGCCGCTAACAATGATAGCGGTGAAGGTAGCTCTGCTCCGGTTAAGGGAAATAAAGTTCTGAGAATTTCAGGTTACAGAAGGAGCATACAGAAGCAGATAAGAAGGAAGATGGGGAAGAACAAGATGGAAAATTTGAGGTGGGGGAGAGGAGAAGAATACGTACAATACCGATGCAATATGCTGTCGTTTTTCAGTACAATGCAGCGAATTAAGGGACACTTAACTGAACGGCACTTGGAGTTGCTTCGACAGACTCCTTTTTGGCCATTAATATCCGCGTTTTACAGTGGTGTGATATCGGAAGATCAATGCAAGAAATCGGAGAGTGATGTCCGCGACATTATCAAGTGCTACAACTCAAGAACAATGAGTTTTCAGTTTGGTAGCACATCTGCATCGTTGACGACAGAAGACATGGCAGAAATTTTGGGACTTCCACAAGAAGGTGAAGAATTGAAGTTAAAGGGATCAAGGAGTTACAAATCAGATTTTGTCGAAAGATATTTTAACGCCAAAAGAGTGTATAAAACATTGGTGGATAAAGCCTTGGACGAAGCAATAAAGGGGAAAAGAGAAACAGACGTAGAGGATGTTGTACGCCTGATTTTGATAGAATTATGCATAACCTTCTTGTTATGTAACTCGGGCCAAGTTACTTCATGGAATTTAGTCAAGTATTGTGAGGATTTAGAAAGTGTTTCAAGATATTCATGGGCGAAAGCTGTGGCTGACGTTCTACACGAGGGATTGGAAAAAAGGACCGGGCGGTTCAAGCCATATTCTGTTCCTGGGTGCGTGGTTGCCATAATGCTTTGGTTGTGTGAGAGAACTAACCTCATACAACCAATCAAGGGAAGGGAGGGACAGAAACCAGCTCTCGTAAAATGGAGCATGCAGGAACTGCACTTGAAACTTAAACGTGTAGATGTCGCAGACATTGGGTTGAGCTTTAAGAAGGACAAGGAGAGGAAGAAACTAGGAGAAAATGAAAAGGCACGTGAAGAAGCTATAACCAATGGACGAGAAGAACGAGAAGAATGGGAAAATGTGACTGGTGATACAGTGGGTGAATTGGAAGATCATCTCCTAGCTCGAAAGAGAAAAATGAAATTCGTCCGCAAACCCCCTATTTCGAAAAGGTTAAATGACAATGAGGACTTGGAAGAAGGATCGGAAGATATTTGGAGAGTGATTCAGAATGCAAGTGCTGATCAAGGAAAAGTGAGTAGGCTAACTGAAAAGTTGGAGAGTAAGAAGGAAAAAACAAAAAAGTTGAAGAGAAAACTAAAAGAAGAAAAGAAGGAAAAGAGAAAGCTGAAAGAGGAAAATGAGGTCTTAACTTCTGAAAAGAAATCATTGTTTGATTCTCTGAAGAGGTTGGTGAAAATGCTGGAAGAAACTCTTGAAGCGGAAAGGGAAGCAGTGAAAAACCTAAAGAAAGAAAAAATGGAGCTGATCAAGGAAAATCGAGAACTCAAAGAAAAGCTCAATCAAGGAAGTCCATGCTCTGCAGTGCAATTGAGGGAGGACGTGCAAGTTGAGGTATCTCCGATGCAATCCTTTTCAACAAGTCCTGAGAAAGGCGTCATGAAGAGGGTATTAGATTTGGAGTTTGAGGATGAACGGGGCGAAAAGAAAAGGAAAGTAGACGAGGAAAGAAATGGAAAGAAGGGAGGATGTCCTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

722

Amino Acids

83.14

Weight (kDa)

9.05

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 270 - 463 1.6e-09 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 101, 229
AccI GTMKAC 1 cut(s) 2124
AccII CGCG 4 cut(s) 200, 379, 755, 813
AccIII TCCGGA 1 cut(s) 342
AclWI GGATC 2 cut(s) 952, 1654
AcoI YGGCCR 4 cut(s) 37, 110, 124, 740
AcsI RAATTY 5 cut(s) 540, 607, 900, 1141, 1586
AcuI CTGAAG 1 cut(s) 1868
AcvI CACGTG 1 cut(s) 1475
AcyI GRCGYC 2 cut(s) 104, 2061
AfaI GTAC 4 cut(s) 191, 639, 673, 1074
AfiI CCNNNNNNNGG 6 cut(s) 35, 88, 521, 920, 1328, 2057
AflIII ACRYGT 1 cut(s) 1396
AgsI TTSAA 7 cut(s) 934, 1179, 1249, 1387, 1753, 1883, 2043
AjiI CACGTC 1 cut(s) 2008
AjnI CCWGG 1 cut(s) 1264
AloI GAACNNNNNNTCC 2 cut(s) 516, 548
Alw21I GWGCWC 1 cut(s) 342
Alw26I GTCTC 2 cut(s) 79, 111
AlwI GGATC 2 cut(s) 952, 1654
AlwNI CAGNNNCTG 1 cut(s) 1378
Ama87I CYCGRG 1 cut(s) 1120
Aor13HI TCCGGA 1 cut(s) 342
AoxI GGCC 5 cut(s) 37, 110, 124, 740, 1123
ApeKI GCWGC 3 cut(s) 202, 458, 679
ApoI RAATTY 5 cut(s) 540, 607, 900, 1141, 1586
AseI ATTAAT 1 cut(s) 746
AspLEI GCGC 2 cut(s) 94, 202
AspS9I GGNCC 3 cut(s) 79, 1123, 1236
AsuC2I CCSGG 1 cut(s) 1240
AsuHPI GGTGA 9 cut(s) 13, 267, 307, 482, 509, 935, 1544, 1556, 1870
AsuII TTCGAA 1 cut(s) 1610
AvaI CYCGRG 1 cut(s) 1120
AvaII GGWCC 2 cut(s) 79, 1236
BalI TGGCCA 1 cut(s) 742
BanII GRGCYC 1 cut(s) 342
BarI GAAGNNNNNNTAC 4 cut(s) 173, 205, 621, 653
BauI CACGAG 2 cut(s) 218, 1217
BbrPI CACGTG 1 cut(s) 1475
BbsI GAAGAC 1 cut(s) 894
Bbv12I GWGCWC 1 cut(s) 342
BbvI GCAGC 3 cut(s) 189, 445, 691
BccI CCATC 2 cut(s) 580, 595
BceAI ACGGC 3 cut(s) 52, 325, 722
BciT130I CCWGG 1 cut(s) 1266
BclI TGATCA 2 cut(s) 1687, 1932
BcnI CCSGG 1 cut(s) 1240
BcoDI GTCTC 2 cut(s) 79, 111
BfaI CTAG 2 cut(s) 1454, 1565
BfmI CTRYAG 1 cut(s) 1986
BfoI RGCGCY 1 cut(s) 95
BisI GCNGC 7 cut(s) 102, 203, 230, 313, 459, 480, 680
BlsI GCNGC 7 cut(s) 103, 204, 231, 314, 460, 481, 681
Bme1390I CCNGG 2 cut(s) 1240, 1266
Bme18I GGWCC 2 cut(s) 79, 1236
BmeT110I CYCGRG 1 cut(s) 1120
BmgBI CACGTC 1 cut(s) 2008
BmgT120I GGNCC 3 cut(s) 79, 1123, 1236
BmrFI CCNGG 2 cut(s) 1240, 1266
BmsI GCATC 4 cut(s) 438, 638, 881, 2019
BpiI GAAGAC 1 cut(s) 894
BpmI CTGGAG 1 cut(s) 383
Bpu14I TTCGAA 1 cut(s) 1610
BpuEI CTTGAG 3 cut(s) 251, 254, 820
BpuMI CCSGG 1 cut(s) 1240
BsaAI YACGTR 2 cut(s) 637, 1475
BsaHI GRCGYC 2 cut(s) 104, 2061
BsaJI CCNNGG 2 cut(s) 1023, 1265
BsaWI WCCGGW 2 cut(s) 342, 514
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 88, 521, 920, 1328, 2057
Bse1I ACTGG 1 cut(s) 1534
BseAI TCCGGA 1 cut(s) 342
BseBI CCWGG 1 cut(s) 1266
BseDI CCNNGG 2 cut(s) 1023, 1265
BseGI GGATG 4 cut(s) 429, 1072, 2101, 2159
BseLI CCNNNNNNNGG 6 cut(s) 35, 88, 521, 920, 1328, 2057
BseMII CTCAG 6 cut(s) 86, 155, 256, 274, 527, 2043
BseNI ACTGG 1 cut(s) 1534
BseRI GAGGAG 3 cut(s) 266, 371, 639
BseX3I CGGCCG 2 cut(s) 110, 124
BseXI GCAGC 3 cut(s) 189, 445, 691
BsgI GTGCAG 1 cut(s) 1364
Bsh1236I CGCG 4 cut(s) 200, 379, 755, 813
Bsh1285I CGRYCG 4 cut(s) 72, 113, 127, 465
BshFI GGCC 5 cut(s) 39, 112, 126, 742, 1125
BsiEI CGRYCG 4 cut(s) 72, 113, 127, 465
BsiHKAI GWGCWC 1 cut(s) 342
BsiHKCI CYCGRG 1 cut(s) 1120
BsiSI CCGG 4 cut(s) 113, 343, 515, 1239
BslFI GGGAC 4 cut(s) 25, 705, 921, 1353
BslI CCNNNNNNNGG 6 cut(s) 35, 88, 521, 920, 1328, 2057
BsmAI GTCTC 2 cut(s) 79, 111
BsmBI CGTCTC 2 cut(s) 79, 111
BsmFI GGGAC 4 cut(s) 25, 705, 921, 1353
BsmI GAATGC 1 cut(s) 1681
BsnI GGCC 5 cut(s) 39, 112, 126, 742, 1125
BsoBI CYCGRG 1 cut(s) 1120
Bsp119I TTCGAA 1 cut(s) 1610
Bsp1286I GDGCHC 1 cut(s) 342
Bsp13I TCCGGA 1 cut(s) 342
Bsp143I GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
BspANI GGCC 5 cut(s) 39, 112, 126, 742, 1125
BspCNI CTCAG 6 cut(s) 87, 156, 255, 273, 528, 2044
BspEI TCCGGA 1 cut(s) 342
BspFNI CGCG 4 cut(s) 200, 379, 755, 813
BspHI TCATGA 1 cut(s) 2064
BspMAI CTGCAG 1 cut(s) 1990
BspPI GGATC 2 cut(s) 952, 1654
BspT104I TTCGAA 1 cut(s) 1610
BsrBI CCGCTC 2 cut(s) 101, 229
BsrI ACTGG 1 cut(s) 1534
BssECI CCNNGG 2 cut(s) 1023, 1265
BssMI GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
BssNI GRCGYC 2 cut(s) 104, 2061
BssSI CACGAG 2 cut(s) 218, 1217
BssT1I CCWWGG 1 cut(s) 1023
Bst2BI CACGAG 2 cut(s) 218, 1217
Bst2UI CCWGG 1 cut(s) 1266
Bst4CI ACNGT 3 cut(s) 73, 764, 1540
Bst6I CTCTTC 5 cut(s) 297, 431, 1748, 1844, 2063
BstACI GRCGYC 2 cut(s) 104, 2061
BstAPI GCANNNNNTGC 1 cut(s) 1378
BstBAI YACGTR 2 cut(s) 637, 1475
BstBI TTCGAA 1 cut(s) 1610
BstC8I GCNNGC 1 cut(s) 1370
BstDEI CTNAG 6 cut(s) 95, 164, 242, 260, 536, 2052
BstENI CCTNNNNNAGG 1 cut(s) 2055
BstF5I GGATG 4 cut(s) 429, 1072, 2101, 2159
BstFNI CGCG 4 cut(s) 200, 379, 755, 813
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 2 cut(s) 94, 202
BstKTI GATC 9 cut(s) 282, 451, 465, 784, 947, 1558, 1649, 1690, 1935
BstMAI GTCTC 2 cut(s) 79, 111
BstMBI GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
BstMCI CGRYCG 4 cut(s) 72, 113, 127, 465
BstMWI GCNNNNNNNGC 7 cut(s) 98, 146, 155, 238, 346, 1249, 1378
BstNI CCWGG 1 cut(s) 1266
BstNSI RCATGY 1 cut(s) 1372
BstSCI CCNGG 2 cut(s) 1238, 1264
BstSFI CTRYAG 1 cut(s) 1986
BstSNI TACGTA 1 cut(s) 637
BstUI CGCG 4 cut(s) 200, 379, 755, 813
BstV1I GCAGC 3 cut(s) 189, 445, 691
BstV2I GAAGAC 1 cut(s) 894
BstZI CGGCCG 2 cut(s) 110, 124
BsuRI GGCC 5 cut(s) 39, 112, 126, 742, 1125
BtrI CACGTC 1 cut(s) 2008
BtsCI GGATG 4 cut(s) 429, 1072, 2101, 2159
BtsI GCAGTG 2 cut(s) 1905, 1995
BtsIMutI CAGTG 4 cut(s) 769, 1545, 1905, 1995
Cac8I GCNNGC 1 cut(s) 1370
CaiI CAGNNNCTG 1 cut(s) 1378
CciI TCATGA 1 cut(s) 2064
CfoI GCGC 2 cut(s) 94, 202
Cfr13I GGNCC 3 cut(s) 79, 1123, 1236
CseI GACGC 4 cut(s) 93, 355, 356, 2050
Csp6I GTAC 4 cut(s) 190, 638, 672, 1073
CviAII CATG 6 cut(s) 892, 1137, 1188, 1369, 1980, 2065
CviQI GTAC 4 cut(s) 190, 638, 672, 1073
DdeI CTNAG 6 cut(s) 95, 164, 242, 260, 536, 2052
DpnI GATC 9 cut(s) 281, 450, 464, 783, 946, 1557, 1648, 1689, 1934
DpnII GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
EaeI YGGCCR 4 cut(s) 37, 110, 124, 740
EagI CGGCCG 2 cut(s) 110, 124
Eam1104I CTCTTC 5 cut(s) 297, 431, 1748, 1844, 2063
EarI CTCTTC 5 cut(s) 297, 431, 1748, 1844, 2063
EciI GGCGGA 1 cut(s) 302
Ecl136II GAGCTC 1 cut(s) 340
EclXI CGGCCG 2 cut(s) 110, 124
Eco105I TACGTA 1 cut(s) 637
Eco130I CCWWGG 1 cut(s) 1023
Eco24I GRGCYC 1 cut(s) 342
Eco32I GATATC 1 cut(s) 774
Eco47I GGWCC 2 cut(s) 79, 1236
Eco52I CGGCCG 2 cut(s) 110, 124
Eco53kI GAGCTC 1 cut(s) 340
Eco57I CTGAAG 1 cut(s) 1868
Eco72I CACGTG 1 cut(s) 1475
Eco88I CYCGRG 1 cut(s) 1120
EcoICRI GAGCTC 1 cut(s) 340
EcoNI CCTNNNNNAGG 1 cut(s) 2055
EcoRII CCWGG 1 cut(s) 1264
EcoRV GATATC 1 cut(s) 774
EcoT14I CCWWGG 1 cut(s) 1023
EcoT22I ATGCAT 1 cut(s) 1100
EcoT38I GRGCYC 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 1023
Esp3I CGTCTC 2 cut(s) 79, 111
FaeI CATG 6 cut(s) 895, 1140, 1191, 1372, 1983, 2068
FalI AAGNNNNNCTT 4 cut(s) 680, 712, 1863, 1895
FaqI GGGAC 4 cut(s) 25, 705, 921, 1353
FatI CATG 6 cut(s) 891, 1136, 1187, 1368, 1979, 2064
FbaI TGATCA 2 cut(s) 1687, 1932
FblI GTMKAC 1 cut(s) 2124
Fnu4HI GCNGC 7 cut(s) 102, 203, 230, 313, 459, 480, 680
FokI GGATG 3 cut(s) 416, 1079, 2108
FriOI GRGCYC 1 cut(s) 342
Fsp4HI GCNGC 7 cut(s) 102, 203, 230, 313, 459, 480, 680
FspBI CTAG 2 cut(s) 1454, 1565
GlaI GCGC 2 cut(s) 93, 201
GluI GCNGC 7 cut(s) 102, 203, 230, 313, 459, 480, 680
GsuI CTGGAG 1 cut(s) 383
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 5 cut(s) 39, 112, 126, 742, 1125
HapII CCGG 4 cut(s) 113, 343, 515, 1239
HgaI GACGC 4 cut(s) 93, 355, 356, 2050
HhaI GCGC 2 cut(s) 94, 202
Hin1I GRCGYC 2 cut(s) 104, 2061
Hin1II CATG 6 cut(s) 895, 1140, 1191, 1372, 1983, 2068
Hin6I GCGC 2 cut(s) 92, 200
HinP1I GCGC 2 cut(s) 92, 200
HincII GTYRAC 1 cut(s) 879
HindII GTYRAC 1 cut(s) 879
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 4 cut(s) 129, 730, 1669, 1841
HpaII CCGG 4 cut(s) 113, 343, 515, 1239
HphI GGTGA 9 cut(s) 13, 267, 307, 482, 509, 935, 1544, 1556, 1870
Hpy166II GTNNAC 2 cut(s) 879, 2125
Hpy8I GTNNAC 2 cut(s) 879, 2125
Hpy99I CGWCG 4 cut(s) 47, 50, 212, 372
HpyCH4III ACNGT 3 cut(s) 73, 764, 1540
HpyCH4IV ACGT 6 cut(s) 636, 1059, 1209, 1396, 1474, 2007
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 146, 155, 238, 346, 1249, 1378
HpyF3I CTNAG 6 cut(s) 95, 164, 242, 260, 536, 2052
HpySE526I ACGT 6 cut(s) 636, 1059, 1209, 1396, 1474, 2007
Hsp92I GRCGYC 2 cut(s) 104, 2061
Hsp92II CATG 6 cut(s) 895, 1140, 1191, 1372, 1983, 2068
HspAI GCGC 2 cut(s) 92, 200
Kpn2I TCCGGA 1 cut(s) 342
Ksp22I TGATCA 2 cut(s) 1687, 1932
Kzo9I GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
LmnI GCTCC 8 cut(s) 337, 345, 358, 364, 517, 558, 1365, 1927
Lsp1109I GCAGC 3 cut(s) 189, 445, 691
LweI GCATC 4 cut(s) 438, 638, 881, 2019
MaeI CTAG 2 cut(s) 1454, 1565
MaeII ACGT 6 cut(s) 636, 1059, 1209, 1396, 1474, 2007
MaeIII GTNAC 6 cut(s) 422, 548, 953, 1115, 1129, 1525
MalI GATC 9 cut(s) 281, 450, 464, 783, 946, 1557, 1648, 1689, 1934
MbiI CCGCTC 2 cut(s) 101, 229
MboI GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
MfeI CAATTG 1 cut(s) 1994
MhlI GDGCHC 1 cut(s) 342
MlsI TGGCCA 1 cut(s) 742
MluNI TGGCCA 1 cut(s) 742
MlyI GAGTC 2 cut(s) 138, 724
MmeI TCCRAC 2 cut(s) 363, 1701
Mox20I TGGCCA 1 cut(s) 742
Mph1103I ATGCAT 1 cut(s) 1100
MroI TCCGGA 1 cut(s) 342
MscI TGGCCA 1 cut(s) 742
Msp20I TGGCCA 1 cut(s) 742
MspI CCGG 4 cut(s) 113, 343, 515, 1239
MspR9I CCNGG 2 cut(s) 1240, 1266
MunI CAATTG 1 cut(s) 1994
Mva1269I GAATGC 1 cut(s) 1681
MvaI CCWGG 1 cut(s) 1266
MvnI CGCG 4 cut(s) 200, 379, 755, 813
MwoI GCNNNNNNNGC 7 cut(s) 98, 146, 155, 238, 346, 1249, 1378
NciI CCSGG 1 cut(s) 1240
NdeII GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
NlaIII CATG 6 cut(s) 895, 1140, 1191, 1372, 1983, 2068
NmeAIII GCCGAG 2 cut(s) 88, 152
NmuCI GTSAC 1 cut(s) 1525
NsiI ATGCAT 1 cut(s) 1100
NspI RCATGY 1 cut(s) 1372
NspV TTCGAA 1 cut(s) 1610
PaeI GCATGC 1 cut(s) 1372
PagI TCATGA 1 cut(s) 2064
PcsI WCGNNNNNNNCGW 7 cut(s) 42, 51, 129, 204, 216, 1215, 1504
PctI GAATGC 1 cut(s) 1681
PfeI GAWTC 2 cut(s) 1669, 1841
PkrI GCNGC 7 cut(s) 103, 204, 231, 314, 460, 481, 681
Ple19I CGATCG 1 cut(s) 465
PleI GAGTC 2 cut(s) 137, 724
PmaCI CACGTG 1 cut(s) 1475
PmlI CACGTG 1 cut(s) 1475
PpsI GAGTC 2 cut(s) 137, 724
Ppu21I YACGTR 2 cut(s) 637, 1475
PshBI ATTAAT 1 cut(s) 746
Psp124BI GAGCTC 1 cut(s) 342
Psp6I CCWGG 1 cut(s) 1264
PspCI CACGTG 1 cut(s) 1475
PspGI CCWGG 1 cut(s) 1264
PspPI GGNCC 3 cut(s) 79, 1123, 1236
PstI CTGCAG 1 cut(s) 1990
PstNI CAGNNNCTG 1 cut(s) 1378
PvuI CGATCG 1 cut(s) 465
RsaI GTAC 4 cut(s) 191, 639, 673, 1074
RsaNI GTAC 4 cut(s) 190, 638, 672, 1073
SacI GAGCTC 1 cut(s) 342
SatI GCNGC 7 cut(s) 102, 203, 230, 313, 459, 480, 680
Sau3AI GATC 9 cut(s) 279, 448, 462, 781, 944, 1555, 1646, 1687, 1932
Sau96I GGNCC 3 cut(s) 79, 1123, 1236
SchI GAGTC 2 cut(s) 138, 724
ScrFI CCNGG 2 cut(s) 1240, 1266
SduI GDGCHC 1 cut(s) 342
SfaNI GCATC 4 cut(s) 438, 638, 881, 2019
SfcI CTRYAG 1 cut(s) 1986
SfuI TTCGAA 1 cut(s) 1610
SinI GGWCC 2 cut(s) 79, 1236
SmlI CTYRAG 3 cut(s) 233, 266, 835
SmoI CTYRAG 3 cut(s) 233, 266, 835
SnaBI TACGTA 1 cut(s) 637
SphI GCATGC 1 cut(s) 1372
SspMI CTAG 2 cut(s) 1454, 1565
SstI GAGCTC 1 cut(s) 342
StyD4I CCNGG 2 cut(s) 1238, 1264
StyI CCWWGG 1 cut(s) 1023
TaaI ACNGT 3 cut(s) 73, 764, 1540
TaiI ACGT 6 cut(s) 639, 1062, 1212, 1399, 1477, 2010
TaqI TCGA 9 cut(s) 132, 177, 207, 225, 724, 972, 1570, 1610, 1945
TatI WGTACW 1 cut(s) 671
TauI GCSGC 4 cut(s) 104, 232, 315, 482
TfiI GAWTC 2 cut(s) 1669, 1841
TscAI CASTG 4 cut(s) 769, 1545, 1905, 1995
TseFI GTSAC 1 cut(s) 1525
TseI GCWGC 3 cut(s) 202, 458, 679
Tsp45I GTSAC 1 cut(s) 1525
TspDTI ATGAA 6 cut(s) 1125, 1176, 1479, 1598, 2081, 2112
TspRI CASTG 4 cut(s) 769, 1545, 1905, 1995
VpaK11BI GGWCC 2 cut(s) 79, 1236
VspI ATTAAT 1 cut(s) 746
XagI CCTNNNNNAGG 1 cut(s) 2055
XapI RAATTY 5 cut(s) 540, 607, 900, 1141, 1586
XceI RCATGY 1 cut(s) 1372
XmiI GTMKAC 1 cut(s) 2124
XspI CTAG 2 cut(s) 1454, 1565
Zsp2I ATGCAT 1 cut(s) 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.