Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001742

Physical Location & Seq

Genomic Coordinates Reverse (-)

22724862 .. 22735153

Gene Structure 10292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g31560.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGAAGTAGAAGAAGCGCAAGTTGCGACGGAGCCTCCCAAAATCCACCGCCTAGACGAGTCCGTAGTGAACCGAATCGCCGCCGGTGAGGTCATCCAACGCCCCGTCTCCGCCGTCAAAGAGCTCGTCGAGAACAGTCTCGACGCCCACTCCTCCTCCATCAACGTCGTCGTCAAGGACGGCGGCCTCAAACTCATCCAAGTCTCCGACAACGGCCACGGAATCCGATATGAGGACTTGCCGATTCTGTGCGAGCGGCATACGACGTCGAAATTGTCGTCGTTTGAGGACCTGCAATCCATAAAGTCCATGGGATTTAGAGGAGAAGCTCTGGCGAGCATGACGTACGTGGCTCATGTGACGGTGACGACGATCACCAAGGGGCAGTTGCATGGTTATAGGGTTTCTTATAAAGATGGAGTCATGGAGAATGAGCCGAAGGCGTGCGCTGCCGTAAAAGGAACTCAGATAATGATTGAGAACTTATTCTATAACATGTCTGCCCGGAGAAAGAATCTGCAAAATTCTGCTGATGATTACTCAAAGATTGTAGATTTGTTAAGCCGGTTCGCCATTCATCACATAAATGTTAGCTTCTCCTGCAGAAAGCATGGAGCCGGTAGAGCAGATGTTAGTTCTGTTGCCACAGTATCAAGAATCGACGCTATTCGTTCAGTTTATGGGGCGTCAGTTGCCCGCAGTCTGATGAAAATAGAAGCTTCGGACAAAGATCCGTCTAGCTCAATTTTCCAGATGGATGGGTTATTCTCAAATTCGGAATATGTTGCGAAGAAGATAACTATGGTGCTTTTTATAAATGATAGATTGGTGGATTGCACTGCATTGAAGAGAGCTCTAGAAATTGTTTATGCCGCTACACTGCCGAAAGCATCAAAACCCTTCCTATACATGTCAATTGTATTACCACCTGAACATGTTGATGTGAATGTTCACCCAACAAAGAGAGAGGTGAGTCTTCTGAATCAGGAAGTTATCATTGAGAAGATACAGTCAGTGGTTGAATCAAGATTGAGAAGCTCCAATGAGACTCAGATATTTCAGGAGCAGACAGTTGAGCCATCTTCATCCTGCCAAATGATTTCTAGCAAGGATTCAAACCGAAATCCTTCACCTTCGGGGTCAAAATCACAAAAGGTTCCAGTGAATAAAATGGTCAGAACAGATTCATCAGATCCTGCTGGAAGGTTGCATATTTACTTGCAAGCACAGCCTCATGGCCATCTTGTTAAGAATACAAGCTTGACTGCTGTTAGATCGTCTGTTAGACAAAGAAGGAACCCAAAGGAAACTGCTGATCTGACTAGTATTCATGAGCTTATTGCTGAAATCGATAGCAATTGTCATTCTGGAATGCTAGACATTGTGAGACACTGCACATACATTGGAATGGCAGATGATGTCTTTGCGTTGCTTCAGCATGACACTCACCTCTACCTTGCAAATGTAGTGAGCTTAAGCAAAGAGCTCATGTATCAGCAAGTTCTACGTCGATTTGCCCATTTCAATGCTATACAGTTAAGTAACCCTGCCCCGCTGAAAGAGTTGATTGTGTTGGCACTGAAAGAGGGGGACACAGATCCAGAATCCACTGAGAATGATGAACTAAATGTGAAGATTGCAGAAATGAATACAGATCTACTTAAACAAAAGGCTGATCTGATAGAGGAGTACTTTTCCATTCACATAGATAAAGATGGAAATTTGTGTAGGCTTCCCGTCGTACTTGACCAATACACACCTGACATGGATCGTGTCCCAGAATTTGCACTTTGTTTGGCCAATGATGTTGATTGGGAAGAAGAGAAAAAATGCTTTCAAGTAATTTCAGCTGCGCTTGGGAACTTTTACGCTATGCATCCTCCTATGTTACCCAATCCATCTGGTGATGGTTTGCAGTTCTACCGAAAAAGGAAGTCGTTCAGGAATAATGAAGAAAGTCTCTCTTGCAGTACTGATGGGGATGATATGATGACAGAGGATGAAATCGAGCATGAATTAGTTGCAGAGGCAGAGACTGCATGGGCACAACGCGAATGGTCAATCCAGCATGTACTGTTTCCATCAATGAGGCTCTTTTTTAAGCCACCAAATTCTATGGCTACCAATGGAACATTTGTTCGGGTTGCTTCACTTGAAAAGCTGTACAGGATTTTTGAAAGATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000793 GO:0000794 GO:0000795 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005712 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0031974 GO:0031981 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0090304 GO:0090351 GO:0097159 GO:0099086 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko03460 ko05200 ko05210 ko05213 ko05226 map01524 map03430 map03460 map05200 map05210 map05213 map05226

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 Mlh1_C

Protein Analysis

729

Amino Acids

81.62

Weight (kDa)

5.87

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	34 - 97	3.5e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	37 - 139	4e-14	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair	PF01119	223 - 344	1.8e-28	DNA mismatch repair protein, C-terminal domain
Mlh1_C	PF16413	440 - 639	1.5e-61	DNA mismatch repair protein Mlh1 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09140 AT4G09140
fragaria_vesca	FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560
malus_domestica	MD12G1033300.v1.1 MD14G1034200.v1.1
prunus_persica	Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1
pyrus_communis	pycom12g01730 pycom12g03050
rosa_chinensis	RchiOBHm_Chr3g0494621 RchiOBHm_Chr7g0226931 RchiOBHm_Chr7g0226941
rosa_laevigata	RLG00000001681
rosa_multiflora	Rmu_co8507019.1_g000001 Rmu_sc0000356.1_g000011 Rmu_sc0002762.1_g000004 Rmu_sc0008925.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018710 Rroxscaffold_3G00232410 Rroxscaffold_6G00391010
rosa_rugosa	Rorug03G0266200 Rorug07G0240400
rosa_samantha	Rh3AG316100 Rh3BG351600 Rh3CG348200 Rh3DG350800 Rh7AG388700 Rh7BG374500 Rh7BG374700 Rh7CG407900 Rh7DG386700
rosa_wichuraiana	Rw3G027600 Rw7G032590 Rw7G032610 Rw7G032620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	411, 815
AatII	GACGTC	1 cut(s)	269
Acc36I	ACCTGC	1 cut(s)	300
AccBSI	CCGCTC	1 cut(s)	256
AccII	CGCG	1 cut(s)	2052
AciI	CCGC	8 cut(s)	49, 81, 111, 183, 256, 697, 873, 1553
AclWI	GGATC	4 cut(s)	725, 1187, 1592, 1776
AcoI	YGGCCR	3 cut(s)	214, 1237, 1797
AcsI	RAATTY	5 cut(s)	523, 772, 1720, 1781, 2110
AcuI	CTGAAG	1 cut(s)	1418
AcyI	GRCGYC	3 cut(s)	144, 266, 686
AfaI	GTAC	6 cut(s)	347, 1691, 1743, 1972, 2073, 2165
AfiI	CCNNNNNNNGG	1 cut(s)	232
AflII	CTTAAG	1 cut(s)	1474
AflIII	ACRYGT	3 cut(s)	495, 909, 934
AgsI	TTSAA	7 cut(s)	847, 1022, 1116, 1525, 1838, 2156, 2177
AhlI	ACTAGT	1 cut(s)	1322
AloI	GAACNNNNNNTCC	2 cut(s)	2121, 2153
Alw21I	GWGCWC	3 cut(s)	126, 856, 1488
Alw26I	GTCTC	7 cut(s)	112, 143, 208, 1040, 1381, 1964, 2027
AlwI	GGATC	4 cut(s)	725, 1187, 1592, 1776
AlwNI	CAGNNNCTG	2 cut(s)	1196, 2036
AoxI	GGCC	4 cut(s)	184, 214, 1237, 1797
ApeKI	GCWGC	2 cut(s)	449, 1850
ApoI	RAATTY	5 cut(s)	523, 772, 1720, 1781, 2110
ArsI	GACNNNNNNTTYG	4 cut(s)	111, 143, 263, 295
Asp700I	GAANNNNTTC	4 cut(s)	485, 1126, 1183, 1937
AspLEI	GCGC	3 cut(s)	19, 449, 1855
AspS9I	GGNCC	1 cut(s)	289
AsuC2I	CCSGG	1 cut(s)	505
AsuHPI	GGTGA	8 cut(s)	98, 367, 376, 944, 982, 1122, 1439, 1916
AvaII	GGWCC	1 cut(s)	289
BaeGI	GKGCMC	1 cut(s)	2047
BalI	TGGCCA	2 cut(s)	1239, 1799
BanII	GRGCYC	3 cut(s)	126, 856, 1488
BbsI	GAAGAC	1 cut(s)	968
Bbv12I	GWGCWC	3 cut(s)	126, 856, 1488
BbvI	GCAGC	2 cut(s)	436, 1837
BceAI	ACGGC	4 cut(s)	98, 196, 229, 437
BcnI	CCSGG	1 cut(s)	505
BcoDI	GTCTC	7 cut(s)	112, 143, 208, 1040, 1381, 1964, 2027
BcuI	ACTAGT	1 cut(s)	1322
BfaI	CTAG	6 cut(s)	53, 738, 857, 1104, 1323, 1376
BfmI	CTRYAG	1 cut(s)	601
BfrI	CTTAAG	1 cut(s)	1474
BfuAI	ACCTGC	1 cut(s)	300
BglII	AGATCT	1 cut(s)	1654
BisI	GCNGC	6 cut(s)	81, 184, 257, 450, 873, 1851
BlsI	GCNGC	6 cut(s)	82, 185, 258, 451, 874, 1852
BmcAI	AGTACT	2 cut(s)	1691, 1972
Bme1390I	CCNGG	1 cut(s)	505
Bme18I	GGWCC	1 cut(s)	289
BmgT120I	GGNCC	1 cut(s)	289
BmiI	GGNNCC	4 cut(s)	33, 616, 1158, 1298
BmrFI	CCNGG	1 cut(s)	505
BmsI	GCATC	2 cut(s)	899, 1885
BpiI	GAAGAC	1 cut(s)	968
BpuMI	CCSGG	1 cut(s)	505
Bsa29I	ATCGAT	1 cut(s)	1350
BsaAI	YACGTR	1 cut(s)	349
BsaHI	GRCGYC	3 cut(s)	144, 266, 686
BsaJI	CCNNGG	3 cut(s)	217, 309, 378
BsaXI	ACNNNNNCTCC	6 cut(s)	19, 49, 134, 140, 164, 170
Bsc4I	CCNNNNNNNGG	1 cut(s)	232
Bse118I	RCCGGY	3 cut(s)	83, 564, 617
Bse1I	ACTGG	1 cut(s)	1160
BseCI	ATCGAT	1 cut(s)	1350
BseDI	CCNNGG	3 cut(s)	217, 309, 378
BseGI	GGATG	7 cut(s)	93, 195, 763, 1085, 1876, 1987, 2005
BseLI	CCNNNNNNNGG	1 cut(s)	232
BseMII	CTCAG	3 cut(s)	479, 1064, 1602
BseNI	ACTGG	1 cut(s)	1160
BseRI	GAGGAG	4 cut(s)	142, 145, 336, 1700
BseSI	GKGCMC	1 cut(s)	2047
BseXI	GCAGC	2 cut(s)	436, 1837
BsgI	GTGCAG	1 cut(s)	1378
Bsh1236I	CGCG	1 cut(s)	2052
BshFI	GGCC	4 cut(s)	186, 216, 1239, 1799
BshVI	ATCGAT	1 cut(s)	1350
BsiHKAI	GWGCWC	3 cut(s)	126, 856, 1488
BsiSI	CCGG	4 cut(s)	84, 505, 565, 618
BsiWI	CGTACG	1 cut(s)	345
BslFI	GGGAC	2 cut(s)	1604, 1760
BslI	CCNNNNNNNGG	1 cut(s)	232
BsmAI	GTCTC	7 cut(s)	112, 143, 208, 1040, 1381, 1964, 2027
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	2 cut(s)	1604, 1760
BsmI	GAATGC	1 cut(s)	1377
BsnI	GGCC	4 cut(s)	186, 216, 1239, 1799
Bsp1286I	GDGCHC	4 cut(s)	126, 856, 1488, 2047
Bsp1407I	TGTACA	1 cut(s)	2163
Bsp143I	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
Bsp19I	CCATGG	1 cut(s)	309
BspACI	CCGC	8 cut(s)	49, 81, 111, 183, 256, 697, 873, 1553
BspANI	GGCC	4 cut(s)	186, 216, 1239, 1799
BspCNI	CTCAG	3 cut(s)	478, 1063, 1603
BspDI	ATCGAT	1 cut(s)	1350
BspFNI	CGCG	1 cut(s)	2052
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	4 cut(s)	33, 616, 1158, 1298
BspMAI	CTGCAG	1 cut(s)	605
BspMI	ACCTGC	1 cut(s)	300
BspPI	GGATC	4 cut(s)	725, 1187, 1592, 1776
BspTI	CTTAAG	1 cut(s)	1474
BsrBI	CCGCTC	1 cut(s)	256
BsrFI	RCCGGY	3 cut(s)	83, 564, 617
BsrGI	TGTACA	1 cut(s)	2163
BsrI	ACTGG	1 cut(s)	1160
BssAI	RCCGGY	3 cut(s)	83, 564, 617
BssECI	CCNNGG	3 cut(s)	217, 309, 378
BssMI	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
BssNI	GRCGYC	3 cut(s)	144, 266, 686
BssT1I	CCWWGG	2 cut(s)	309, 378
Bst4CI	ACNGT	7 cut(s)	137, 364, 649, 1011, 1072, 1536, 2076
Bst6I	CTCTTC	2 cut(s)	842, 1815
BstACI	GRCGYC	3 cut(s)	144, 266, 686
BstAFI	CTTAAG	1 cut(s)	1474
BstAPI	GCANNNNNTGC	1 cut(s)	2036
BstAUI	TGTACA	1 cut(s)	2163
BstBAI	YACGTR	1 cut(s)	349
BstC8I	GCNNGC	5 cut(s)	254, 337, 445, 697, 1224
BstDEI	CTNAG	3 cut(s)	465, 1050, 1611
BstDSI	CCRYGG	2 cut(s)	217, 309
BstF5I	GGATG	7 cut(s)	93, 195, 763, 1085, 1876, 1987, 2005
BstFNI	CGCG	1 cut(s)	2052
BstHHI	GCGC	3 cut(s)	19, 449, 1855
BstKTI	GATC	9 cut(s)	375, 733, 1195, 1277, 1318, 1600, 1657, 1678, 1771
BstMAI	GTCTC	7 cut(s)	112, 143, 208, 1040, 1381, 1964, 2027
BstMBI	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 449, 600, 623, 692, 1228, 2036
BstNSI	RCATGY	4 cut(s)	499, 913, 938, 2072
BstSCI	CCNGG	1 cut(s)	503
BstSFI	CTRYAG	1 cut(s)	601
BstSLI	GKGCMC	1 cut(s)	2047
BstUI	CGCG	1 cut(s)	2052
BstV1I	GCAGC	2 cut(s)	436, 1837
BstV2I	GAAGAC	1 cut(s)	968
BstX2I	RGATCY	4 cut(s)	730, 1192, 1597, 1654
BstXI	CCANNNNNNTGG	1 cut(s)	758
BstYI	RGATCY	4 cut(s)	730, 1192, 1597, 1654
Bsu15I	ATCGAT	1 cut(s)	1350
BsuRI	GGCC	4 cut(s)	186, 216, 1239, 1799
BsuTUI	ATCGAT	1 cut(s)	1350
BtgI	CCRYGG	2 cut(s)	217, 309
BtsCI	GGATG	7 cut(s)	93, 195, 763, 1085, 1876, 1987, 2005
BtsI	GCAGTG	3 cut(s)	837, 878, 1390
BtsIMutI	CAGTG	7 cut(s)	837, 878, 1020, 1167, 1390, 1577, 1608
BveI	ACCTGC	1 cut(s)	300
Cac8I	GCNNGC	5 cut(s)	254, 337, 445, 697, 1224
CaiI	CAGNNNCTG	2 cut(s)	1196, 2036
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	3 cut(s)	19, 449, 1855
Cfr10I	RCCGGY	3 cut(s)	83, 564, 617
Cfr13I	GGNCC	1 cut(s)	289
ClaI	ATCGAT	1 cut(s)	1350
CseI	GACGC	3 cut(s)	152, 671, 675
Csp6I	GTAC	6 cut(s)	346, 1690, 1742, 1971, 2072, 2164
CviQI	GTAC	6 cut(s)	346, 1690, 1742, 1971, 2072, 2164
DdeI	CTNAG	3 cut(s)	465, 1050, 1611
DpnI	GATC	9 cut(s)	374, 732, 1194, 1276, 1317, 1599, 1656, 1677, 1770
DpnII	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
EaeI	YGGCCR	3 cut(s)	214, 1237, 1797
Eam1104I	CTCTTC	2 cut(s)	842, 1815
EarI	CTCTTC	2 cut(s)	842, 1815
EciI	GGCGGA	1 cut(s)	100
Ecl136II	GAGCTC	3 cut(s)	124, 854, 1486
Eco130I	CCWWGG	2 cut(s)	309, 378
Eco24I	GRGCYC	3 cut(s)	126, 856, 1488
Eco47I	GGWCC	1 cut(s)	289
Eco53kI	GAGCTC	3 cut(s)	124, 854, 1486
Eco57I	CTGAAG	1 cut(s)	1418
EcoICRI	GAGCTC	3 cut(s)	124, 854, 1486
EcoO109I	RGGNCCY	1 cut(s)	289
EcoT14I	CCWWGG	2 cut(s)	309, 378
EcoT22I	ATGCAT	1 cut(s)	1878
EcoT38I	GRGCYC	3 cut(s)	126, 856, 1488
ErhI	CCWWGG	2 cut(s)	309, 378
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	2 cut(s)	1948, 1980
FaqI	GGGAC	2 cut(s)	1604, 1760
FauI	CCCGC	2 cut(s)	704, 1560
Fnu4HI	GCNGC	6 cut(s)	81, 184, 257, 450, 873, 1851
FokI	GGATG	7 cut(s)	80, 182, 770, 1072, 1863, 1994, 2012
FriOI	GRGCYC	3 cut(s)	126, 856, 1488
Fsp4HI	GCNGC	6 cut(s)	81, 184, 257, 450, 873, 1851
FspBI	CTAG	6 cut(s)	53, 738, 857, 1104, 1323, 1376
GlaI	GCGC	3 cut(s)	18, 448, 1854
GluI	GCNGC	6 cut(s)	81, 184, 257, 450, 873, 1851
HaeIII	GGCC	4 cut(s)	186, 216, 1239, 1799
HapII	CCGG	4 cut(s)	84, 505, 565, 618
HgaI	GACGC	3 cut(s)	152, 671, 675
HhaI	GCGC	3 cut(s)	19, 449, 1855
Hin1I	GRCGYC	3 cut(s)	144, 266, 686
Hin6I	GCGC	3 cut(s)	17, 447, 1853
HinP1I	GCGC	3 cut(s)	17, 447, 1853
HindIII	AAGCTT	2 cut(s)	717, 1258
HpaII	CCGG	4 cut(s)	84, 505, 565, 618
HphI	GGTGA	8 cut(s)	98, 367, 376, 944, 982, 1122, 1439, 1916
Hpy166II	GTNNAC	2 cut(s)	70, 952
Hpy8I	GTNNAC	2 cut(s)	70, 952
HpyAV	CCTTC	6 cut(s)	433, 910, 1137, 1143, 1197, 1287
HpyCH4III	ACNGT	7 cut(s)	137, 364, 649, 1011, 1072, 1536, 2076
HpyCH4IV	ACGT	5 cut(s)	165, 266, 344, 348, 1507
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 449, 600, 623, 692, 1228, 2036
HpyF3I	CTNAG	3 cut(s)	465, 1050, 1611
HpySE526I	ACGT	5 cut(s)	165, 266, 344, 348, 1507
Hsp92I	GRCGYC	3 cut(s)	144, 266, 686
HspAI	GCGC	3 cut(s)	17, 447, 1853
Kzo9I	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
LmnI	GCTCC	4 cut(s)	31, 614, 1043, 1063
Lsp1109I	GCAGC	2 cut(s)	436, 1837
LweI	GCATC	2 cut(s)	899, 1885
MaeI	CTAG	6 cut(s)	53, 738, 857, 1104, 1323, 1376
MaeII	ACGT	5 cut(s)	165, 266, 344, 348, 1507
MaeIII	GTNAC	4 cut(s)	358, 364, 1541, 1887
MalI	GATC	9 cut(s)	374, 732, 1194, 1276, 1317, 1599, 1656, 1677, 1770
MbiI	CCGCTC	1 cut(s)	256
MboI	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
MfeI	CAATTG	2 cut(s)	915, 1357
MflI	RGATCY	4 cut(s)	730, 1192, 1597, 1654
MhlI	GDGCHC	4 cut(s)	126, 856, 1488, 2047
MlsI	TGGCCA	2 cut(s)	1239, 1799
MluNI	TGGCCA	2 cut(s)	1239, 1799
MlyI	GAGTC	4 cut(s)	68, 429, 982, 1042
MmeI	TCCRAC	2 cut(s)	121, 231
Mox20I	TGGCCA	2 cut(s)	1239, 1799
Mph1103I	ATGCAT	1 cut(s)	1878
MroXI	GAANNNNTTC	4 cut(s)	485, 1126, 1183, 1937
MscI	TGGCCA	2 cut(s)	1239, 1799
MseI	TTAA	6 cut(s)	560, 1248, 1475, 1538, 1662, 2100
MslI	CAYNNNNRTG	4 cut(s)	585, 939, 1406, 1524
Msp20I	TGGCCA	2 cut(s)	1239, 1799
MspA1I	CMGCKG	2 cut(s)	1555, 1850
MspCI	CTTAAG	1 cut(s)	1474
MspI	CCGG	4 cut(s)	84, 505, 565, 618
MspR9I	CCNGG	1 cut(s)	505
MunI	CAATTG	2 cut(s)	915, 1357
Mva1269I	GAATGC	1 cut(s)	1377
MvnI	CGCG	1 cut(s)	2052
MwoI	GCNNNNNNNGC	7 cut(s)	23, 449, 600, 623, 692, 1228, 2036
NciI	CCSGG	1 cut(s)	505
NcoI	CCATGG	1 cut(s)	309
NdeII	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
NlaIV	GGNNCC	4 cut(s)	33, 616, 1158, 1298
NmuCI	GTSAC	2 cut(s)	358, 364
NsiI	ATGCAT	1 cut(s)	1878
NspI	RCATGY	4 cut(s)	499, 913, 938, 2072
PagI	TCATGA	1 cut(s)	1330
PciI	ACATGT	3 cut(s)	495, 909, 934
PcsI	WCGNNNNNNNCGW	2 cut(s)	275, 368
PctI	GAATGC	1 cut(s)	1377
PdmI	GAANNNNTTC	4 cut(s)	485, 1126, 1183, 1937
Pfl23II	CGTACG	1 cut(s)	345
PkrI	GCNGC	6 cut(s)	82, 185, 258, 451, 874, 1852
PleI	GAGTC	4 cut(s)	67, 428, 981, 1042
PpsI	GAGTC	4 cut(s)	67, 428, 981, 1042
Ppu21I	YACGTR	1 cut(s)	349
PpuMI	RGGWCCY	1 cut(s)	289
PscI	ACATGT	3 cut(s)	495, 909, 934
PsiI	TTATAA	2 cut(s)	411, 815
Psp124BI	GAGCTC	3 cut(s)	126, 856, 1488
Psp5II	RGGWCCY	1 cut(s)	289
PspLI	CGTACG	1 cut(s)	345
PspN4I	GGNNCC	4 cut(s)	33, 616, 1158, 1298
PspPI	GGNCC	1 cut(s)	289
PspPPI	RGGWCCY	1 cut(s)	289
PstI	CTGCAG	1 cut(s)	605
PstNI	CAGNNNCTG	2 cut(s)	1196, 2036
PsuI	RGATCY	4 cut(s)	730, 1192, 1597, 1654
PvuII	CAGCTG	1 cut(s)	1850
RsaI	GTAC	6 cut(s)	347, 1691, 1743, 1972, 2073, 2165
RsaNI	GTAC	6 cut(s)	346, 1690, 1742, 1971, 2072, 2164
RseI	CAYNNNNRTG	4 cut(s)	585, 939, 1406, 1524
SacI	GAGCTC	3 cut(s)	126, 856, 1488
SaqAI	TTAA	6 cut(s)	560, 1248, 1475, 1538, 1662, 2100
SatI	GCNGC	6 cut(s)	81, 184, 257, 450, 873, 1851
Sau3AI	GATC	9 cut(s)	372, 730, 1192, 1274, 1315, 1597, 1654, 1675, 1768
Sau96I	GGNCC	1 cut(s)	289
ScaI	AGTACT	2 cut(s)	1691, 1972
SchI	GAGTC	4 cut(s)	68, 429, 982, 1042
ScrFI	CCNGG	1 cut(s)	505
SduI	GDGCHC	4 cut(s)	126, 856, 1488, 2047
SfaNI	GCATC	2 cut(s)	899, 1885
SfcI	CTRYAG	1 cut(s)	601
SgrAI	CRCCGGYG	1 cut(s)	83
SinI	GGWCC	1 cut(s)	289
SmiMI	CAYNNNNRTG	4 cut(s)	585, 939, 1406, 1524
SmlI	CTYRAG	1 cut(s)	1474
SmoI	CTYRAG	1 cut(s)	1474
SpeI	ACTAGT	1 cut(s)	1322
SsiI	CCGC	8 cut(s)	49, 81, 111, 183, 256, 697, 873, 1553
SspMI	CTAG	6 cut(s)	53, 738, 857, 1104, 1323, 1376
SstI	GAGCTC	3 cut(s)	126, 856, 1488
StyD4I	CCNGG	1 cut(s)	503
StyI	CCWWGG	2 cut(s)	309, 378
TaaI	ACNGT	7 cut(s)	137, 364, 649, 1011, 1072, 1536, 2076
TaiI	ACGT	5 cut(s)	168, 269, 347, 351, 1510
TaqI	TCGA	7 cut(s)	129, 141, 269, 660, 1350, 1510, 2007
TatI	WGTACW	4 cut(s)	1689, 1970, 2071, 2163
TauI	GCSGC	4 cut(s)	83, 186, 259, 875
Tru1I	TTAA	6 cut(s)	560, 1248, 1475, 1538, 1662, 2100
Tru9I	TTAA	6 cut(s)	560, 1248, 1475, 1538, 1662, 2100
TscAI	CASTG	7 cut(s)	844, 885, 1020, 1167, 1397, 1584, 1615
TseFI	GTSAC	2 cut(s)	358, 364
TseI	GCWGC	2 cut(s)	449, 1850
Tsp45I	GTSAC	2 cut(s)	358, 364
TspGWI	ACGGA	4 cut(s)	44, 52, 234, 723
TspRI	CASTG	7 cut(s)	844, 885, 1020, 1167, 1397, 1584, 1615
Vha464I	CTTAAG	1 cut(s)	1474
VpaK11BI	GGWCC	1 cut(s)	289
XapI	RAATTY	5 cut(s)	523, 772, 1720, 1781, 2110
XbaI	TCTAGA	1 cut(s)	856
XceI	RCATGY	4 cut(s)	499, 913, 938, 2072
XcmI	CCANNNNNNNNNTGG	1 cut(s)	307
XmnI	GAANNNNTTC	4 cut(s)	485, 1126, 1183, 1937
XspI	CTAG	6 cut(s)	53, 738, 857, 1104, 1323, 1376
ZraI	GACGTC	1 cut(s)	267
ZrmI	AGTACT	2 cut(s)	1691, 1972
Zsp2I	ATGCAT	1 cut(s)	1878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.