DNA mismatch repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G09140 AT4G09140 |
| fragaria_vesca | FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 |
| malus_domestica | MD12G1033300.v1.1 MD14G1034200.v1.1 |
| prunus_persica | Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 |
| pyrus_communis | pycom12g01730 pycom12g03050 |
| rosa_chinensis | RchiOBHm_Chr3g0494621 RchiOBHm_Chr7g0226931 RchiOBHm_Chr7g0226941 |
| rosa_laevigata | RLG00000001681 |
| rosa_multiflora | Rmu_co8507019.1_g000001 Rmu_sc0000356.1_g000011 Rmu_sc0002762.1_g000004 Rmu_sc0008925.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00018710 Rroxscaffold_3G00232410 Rroxscaffold_6G00391010 |
| rosa_rugosa | Rorug03G0266200 Rorug07G0240400 |
| rosa_samantha | Rh3AG316100 Rh3BG351600 Rh3CG348200 Rh3DG350800 Rh7AG388700 Rh7BG374500 Rh7BG374700 Rh7CG407900 Rh7DG386700 |
| rosa_wichuraiana | Rw3G027600 Rw7G032590 Rw7G032610 Rw7G032620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 102 |
| AflIII | ACRYGT | 1 cut(s) | 186 |
| AgsI | TTSAA | 1 cut(s) | 234 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 289, 321 |
| AleI | CACNNNNGTG | 1 cut(s) | 276 |
| AluBI | AGCT | 2 cut(s) | 20, 285 |
| AluI | AGCT | 2 cut(s) | 20, 285 |
| Alw26I | GTCTC | 1 cut(s) | 100 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 176 |
| AsuC2I | CCSGG | 1 cut(s) | 196 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 67 |
| BccI | CCATC | 2 cut(s) | 101, 109 |
| BceAI | ACGGC | 1 cut(s) | 128 |
| BcnI | CCSGG | 1 cut(s) | 196 |
| BcoDI | GTCTC | 1 cut(s) | 100 |
| BfmI | CTRYAG | 1 cut(s) | 292 |
| Bme1390I | CCNGG | 1 cut(s) | 196 |
| BmrFI | CCNGG | 1 cut(s) | 196 |
| BpuMI | CCSGG | 1 cut(s) | 196 |
| BsaI | GGTCTC | 1 cut(s) | 100 |
| Bse118I | RCCGGY | 1 cut(s) | 255 |
| BseMII | CTCAG | 1 cut(s) | 170 |
| BsiSI | CCGG | 2 cut(s) | 196, 256 |
| BsmAI | GTCTC | 1 cut(s) | 100 |
| Bso31I | GGTCTC | 1 cut(s) | 100 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspMAI | CTGCAG | 1 cut(s) | 296 |
| BspTNI | GGTCTC | 1 cut(s) | 100 |
| BsrFI | RCCGGY | 1 cut(s) | 255 |
| BssAI | RCCGGY | 1 cut(s) | 255 |
| BssMI | GATC | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMAI | GTCTC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 291 |
| BstNSI | RCATGY | 1 cut(s) | 190 |
| BstSCI | CCNGG | 1 cut(s) | 194 |
| BstSFI | CTRYAG | 1 cut(s) | 292 |
| BtsI | GCAGTG | 1 cut(s) | 317 |
| BtsIMutI | CAGTG | 1 cut(s) | 317 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| Cfr10I | RCCGGY | 1 cut(s) | 255 |
| CviAII | CATG | 5 cut(s) | 31, 47, 83, 122, 187 |
| CviJI | RGCY | 5 cut(s) | 20, 44, 127, 255, 285 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 44, 127, 255, 285 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| Eco31I | GGTCTC | 1 cut(s) | 100 |
| FaeI | CATG | 5 cut(s) | 34, 50, 86, 125, 190 |
| FaiI | YATR | 9 cut(s) | 32, 39, 48, 84, 90, 102, 123, 183, 188 |
| FatI | CATG | 5 cut(s) | 30, 46, 82, 121, 186 |
| HapII | CCGG | 2 cut(s) | 196, 256 |
| Hin1II | CATG | 5 cut(s) | 34, 50, 86, 125, 190 |
| HinfI | GANTC | 1 cut(s) | 205 |
| HpaII | CCGG | 2 cut(s) | 196, 256 |
| HphI | GGTGA | 2 cut(s) | 58, 67 |
| Hpy188I | TCNGA | 1 cut(s) | 159 |
| Hpy99I | CGWCG | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4III | ACNGT | 1 cut(s) | 55 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 5 cut(s) | 82, 211, 294, 317, 322 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 291 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 5 cut(s) | 34, 50, 86, 125, 190 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LmnI | GCTCC | 1 cut(s) | 118 |
| LpnPI | CCDG | 4 cut(s) | 153, 209, 269, 304 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 2 cut(s) | 49, 55 |
| MalI | GATC | 1 cut(s) | 65 |
| MboI | GATC | 1 cut(s) | 63 |
| MnlI | CCTC | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 176 |
| MseI | TTAA | 1 cut(s) | 251 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MspI | CCGG | 2 cut(s) | 196, 256 |
| MspR9I | CCNGG | 1 cut(s) | 196 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 291 |
| NciI | CCSGG | 1 cut(s) | 196 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 5 cut(s) | 34, 50, 86, 125, 190 |
| NmuCI | GTSAC | 2 cut(s) | 49, 55 |
| NspI | RCATGY | 1 cut(s) | 190 |
| OliI | CACNNNNGTG | 1 cut(s) | 276 |
| PciI | ACATGT | 1 cut(s) | 186 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 59 |
| PdmI | GAANNNNTTC | 1 cut(s) | 176 |
| PfeI | GAWTC | 1 cut(s) | 205 |
| PscI | ACATGT | 1 cut(s) | 186 |
| PsiI | TTATAA | 1 cut(s) | 102 |
| PstI | CTGCAG | 1 cut(s) | 296 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| SaqAI | TTAA | 1 cut(s) | 251 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| ScrFI | CCNGG | 1 cut(s) | 196 |
| SetI | ASST | 4 cut(s) | 22, 38, 135, 287 |
| SfcI | CTRYAG | 1 cut(s) | 292 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| StyD4I | CCNGG | 1 cut(s) | 194 |
| TaaI | ACNGT | 1 cut(s) | 55 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 10 |
| TfiI | GAWTC | 1 cut(s) | 205 |
| Tru1I | TTAA | 1 cut(s) | 251 |
| Tru9I | TTAA | 1 cut(s) | 251 |
| TscAI | CASTG | 1 cut(s) | 324 |
| TseFI | GTSAC | 2 cut(s) | 49, 55 |
| Tsp45I | GTSAC | 2 cut(s) | 49, 55 |
| TspDTI | ATGAA | 1 cut(s) | 257 |
| TspRI | CASTG | 1 cut(s) | 324 |
| XceI | RCATGY | 1 cut(s) | 190 |
| XmnI | GAANNNNTTC | 1 cut(s) | 176 |