Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001742

Physical Location & Seq

Genomic Coordinates Reverse (-)

40273264 .. 40284097

Gene Structure 10834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG374500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGAAGAAGAAGAAGAAGAGCAAGTGGCGACGGAGCCTCCCAAAATTCACCGCCTAGACGAGTCCGTAGTGAACCGAATCGGCGCCGGTGAGGTCATCCAACGCCCCGTCTCGGCCGTCAAGGAGCTCGTCGAGAACAGCCTCGACGCCCACTCCTCCTCCATCAACGTCGTCGTCAAGGACGGCGGCCTCAAACTCATCCAAGTCTCCGACGACGGCCACGGAATCCGATATGAGGACTTGCCGATACTGTGCGAGCGGCATACGACGTCGAAATTGTCGTCGTTTGAAGACCTGCAGTCCATAAAGTCGATGGGGTTTCGAGGAGAAGCTCTTGCGAGCATGACGTATGTGGCTCATGTGACGGTGACGACGATCACCAAAGGGCAGTTGCATGGTTACAGGGTTTCTTATAAAGATGGAGTGATGGAGAATGAGCCGAAGGCGTGTGCTGCCGTAAAAGGAACTCAGATAATGATTGAGAACTTATTCTATAACATGTCTGCCCGGAGAAAGAATCTGCAAAACTCTGCTGATGATTATTCAAAGATTGTAGATTTGTTAAGCCGGTTTGCCATTCATCACACAAGTGTTAGCTTCTCCTGCAGAAAGCCTTTTGATATGCTAAATCATTCTACATTTATCCGAATGGAGCCGGTGGAGCAGATTCTGATGAAAGTAGAAGCTTTGGACAATGATCCGTCGAGCTCAGTTTTCCAGATGGATGGCTTTATCTCCAATTCCGAATATGTTGCGAAGAAGATAACTATGGTGCTTTTTATAAACGATAGATTGGTGGATTGCACTGCATTGAAGAGAGCTCTGGAAATTGTTTATGCTGCTACATTGCCGAAAGCATCAAAACCCTTCATATACATGTCAATTGTATTACCACCTGAACATGTTGATGTGAATGTTCACCCGACAAAGAGGGAGGTGAGTCTTCTGAATCAGGAAGTCATCATTGAGAAGATACAGTCAGTGGTTGAATCAAGATTGAGAAGCTCCAATGAGACACAGATATTTCAGGAGCAGACAGTTGAACCACCTTCATCCAGCCAAATGATTTCTAGCAAGGATTCAAATCGAAATCCTTTGGCATCTGGATCAAAATCACAAAAGGTTCCAGTGAATAAAATGGTCAGAACAGATTCATCGGATCCTGCTGGAAGGTTGCATATTTACTTGCACGCAGAGCCTCGTGGCCATCTTGAAAAAAATACTAGCTTGACTGCTGTTAGATCGTCTGTTAGACAAAGAAGGAACCCAAAGGAAACGGCTGATCTGAGTAGCATTCAGGAGCTTATTGCTGAAATTGATAGCAATTGTCATTCTGGTATGCTAGACATTGTGAGAAACTGCACATACATTGGAATGGCAGATGACGTCTTTGCATTGCTTCAGCATGACACACACCTCTACCTTGCAAATGTAGTAAGCTTGAGCAAAGAGCTCATGTATCAGCAAGTTCTACGTCGATTTGCTCATTTTAATGCTATACAATTAAGTAACCCAGCCCCGCTGAAGGAGTTGATTGTGTTGGCACTGAAAGAGGGGGACACAGATCCAGAATCCACTGAGAATGATGAACTAAATGAGAAGATTGCAGAAATGAATACAGAACTACTTAAGCAAAAGGCTGATCTAGTAGAGGAGTACTTTTCCATTCACATAGATAAAGATGGAAATTTGTCCAGGCTTCCGGTCATACTTGACCAATACACACCTGACATGGATCGTGTCCCAGAATTTGTGCTTTGTTTGGGCAACGATGTTGATTGGGAAGAAGAGAAAAAATGCTTCCAAGTAATTTCAGCTGCACTTGGGAACTTTTATGCCATGCATCCTCCTATGTTACCCAACCCATCTGGTGATGGTTTGCAATTTTACCAAAAAAGGAAGTTGGTCAGGAATAATGAAGGAAGTCTCTCTTGCAATACTGCTGCGGATGATATGATGATGGAGGATGAAATCGAGCATGAACTAGTTGCAGAGGCAGAGACTGCATGGGCACAGCGCGAATGGTCGATCCAGCATGTATTGTTTCCATCAATGAGGCTCTTTTTTAAGCCACCAAATTCTATGGCTACAAATGGAACATTTGTTCGAGTTGCTTCACTAGAAAAGCTGTACAGGATTTTTGAAAGATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000793 GO:0000794 GO:0000795 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005712 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0031974 GO:0031981 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0090304 GO:0090351 GO:0097159 GO:0099086 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko03460 ko05200 ko05210 ko05213 ko05226 map01524 map03430 map03460 map05200 map05210 map05213 map05226

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 Mlh1_C

Protein Analysis

717

Amino Acids

80.92

Weight (kDa)

5.37

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	35 - 98	6.9e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	38 - 140	3.6e-14	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair	PF01119	234 - 333	5.2e-26	DNA mismatch repair protein, C-terminal domain
Mlh1_C	PF16413	429 - 717	6.8e-84	DNA mismatch repair protein Mlh1 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09140 AT4G09140
fragaria_vesca	FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560
malus_domestica	MD12G1033300.v1.1 MD14G1034200.v1.1
prunus_persica	Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1
pyrus_communis	pycom12g01730 pycom12g03050
rosa_chinensis	RchiOBHm_Chr3g0494621 RchiOBHm_Chr7g0226931 RchiOBHm_Chr7g0226941
rosa_laevigata	RLG00000001681
rosa_multiflora	Rmu_co8507019.1_g000001 Rmu_sc0000356.1_g000011 Rmu_sc0002762.1_g000004 Rmu_sc0008925.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018710 Rroxscaffold_3G00232410 Rroxscaffold_6G00391010
rosa_rugosa	Rorug03G0266200 Rorug07G0240400
rosa_samantha	Rh3AG316100 Rh3BG351600 Rh3CG348200 Rh3DG350800 Rh7AG388700 Rh7BG374500 Rh7BG374700 Rh7CG407900 Rh7DG386700
rosa_wichuraiana	Rw3G027600 Rw7G032590 Rw7G032610 Rw7G032620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	414, 782
AatII	GACGTC	2 cut(s)	272, 1389
Acc36I	ACCTGC	1 cut(s)	303
AccB1I	GGYRCC	1 cut(s)	83
AccBSI	CCGCTC	1 cut(s)	259
AccII	CGCG	1 cut(s)	2019
AciI	CCGC	5 cut(s)	52, 186, 259, 1520, 1946
AclWI	GGATC	7 cut(s)	692, 1114, 1154, 1167, 1559, 1743, 2023
AcoI	YGGCCR	3 cut(s)	114, 217, 1204
AcsI	RAATTY	4 cut(s)	45, 1687, 1748, 2077
AcuI	CTGAAG	2 cut(s)	1385, 1544
AcyI	GRCGYC	4 cut(s)	84, 147, 269, 1386
AfaI	GTAC	2 cut(s)	1658, 2132
AfiI	CCNNNNNNNGG	3 cut(s)	112, 235, 1525
AflII	CTTAAG	1 cut(s)	1628
AflIII	ACRYGT	3 cut(s)	498, 876, 901
AgsI	TTSAA	8 cut(s)	290, 546, 814, 989, 1043, 1083, 1214, 2144
AhdI	GACNNNNNGTC	1 cut(s)	298
AhlI	ACTAGT	1 cut(s)	1984
AjnI	CCWGG	1 cut(s)	1694
AleI	CACNNNNGTG	1 cut(s)	588
AloI	GAACNNNNNNTCC	2 cut(s)	2088, 2120
Alw21I	GWGCWC	4 cut(s)	129, 710, 823, 1455
Alw26I	GTCTC	5 cut(s)	115, 211, 1007, 1931, 1994
AlwI	GGATC	7 cut(s)	692, 1114, 1154, 1167, 1559, 1743, 2023
AlwNI	CAGNNNCTG	2 cut(s)	670, 2003
AoxI	GGCC	4 cut(s)	114, 187, 217, 1204
ApeKI	GCWGC	4 cut(s)	452, 839, 1817, 1943
ApoI	RAATTY	4 cut(s)	45, 1687, 1748, 2077
ArsI	GACNNNNNNTTYG	2 cut(s)	266, 298
Asp700I	GAANNNNTTC	2 cut(s)	488, 1150
AspLEI	GCGC	2 cut(s)	86, 2019
AsuC2I	CCSGG	1 cut(s)	508
AsuHPI	GGTGA	7 cut(s)	41, 101, 370, 379, 911, 949, 1883
BaeGI	GKGCMC	1 cut(s)	2014
BalI	TGGCCA	1 cut(s)	1206
BamHI	GGATCC	1 cut(s)	1159
BanI	GGYRCC	1 cut(s)	83
BanII	GRGCYC	4 cut(s)	129, 710, 823, 1455
BauI	CACGAG	1 cut(s)	1200
BbsI	GAAGAC	2 cut(s)	297, 935
Bbv12I	GWGCWC	4 cut(s)	129, 710, 823, 1455
BbvI	GCAGC	4 cut(s)	439, 826, 1804, 1930
BceAI	ACGGC	5 cut(s)	101, 199, 232, 440, 1293
BcgI	CGANNNNNNTGC	2 cut(s)	734, 768
BciT130I	CCWGG	1 cut(s)	1696
BcnI	CCSGG	1 cut(s)	508
BcoDI	GTCTC	5 cut(s)	115, 211, 1007, 1931, 1994
BcuI	ACTAGT	1 cut(s)	1984
BfaI	CTAG	7 cut(s)	56, 1071, 1224, 1343, 1646, 1985, 2120
BfmI	CTRYAG	2 cut(s)	296, 604
BfoI	RGCGCY	1 cut(s)	87
BfrI	CTTAAG	1 cut(s)	1628
BfuAI	ACCTGC	1 cut(s)	303
BisI	GCNGC	6 cut(s)	187, 260, 453, 840, 1818, 1944
BlsI	GCNGC	6 cut(s)	188, 261, 454, 841, 1819, 1945
BmcAI	AGTACT	1 cut(s)	1658
Bme1390I	CCNGG	2 cut(s)	508, 1696
BmeRI	GACNNNNNGTC	1 cut(s)	298
BmiI	GGNNCC	6 cut(s)	36, 85, 654, 1125, 1161, 1265
BmrFI	CCNGG	2 cut(s)	508, 1696
BmsI	GCATC	4 cut(s)	866, 1109, 1852, 2138
BpiI	GAAGAC	2 cut(s)	297, 935
BpuEI	CTTGAG	1 cut(s)	1462
BpuMI	CCSGG	1 cut(s)	508
BsaBI	GATNNNNATC	2 cut(s)	1083, 1111
BsaHI	GRCGYC	4 cut(s)	84, 147, 269, 1386
BsaJI	CCNNGG	1 cut(s)	220
BsaWI	WCCGGW	1 cut(s)	1702
BsaXI	ACNNNNNCTCC	6 cut(s)	22, 52, 137, 143, 167, 173
Bsc4I	CCNNNNNNNGG	3 cut(s)	112, 235, 1525
Bse118I	RCCGGY	3 cut(s)	86, 567, 655
Bse1I	ACTGG	1 cut(s)	1127
Bse3DI	GCAATG	2 cut(s)	845, 1394
Bse8I	GATNNNNATC	2 cut(s)	1083, 1111
BseBI	CCWGG	1 cut(s)	1696
BseDI	CCNNGG	1 cut(s)	220
BseGI	GGATG	7 cut(s)	96, 198, 730, 1052, 1843, 1954, 1972
BseJI	GATNNNNATC	2 cut(s)	1083, 1111
BseLI	CCNNNNNNNGG	3 cut(s)	112, 235, 1525
BseMI	GCAATG	2 cut(s)	845, 1394
BseMII	CTCAG	4 cut(s)	482, 723, 1277, 1569
BseNI	ACTGG	1 cut(s)	1127
BseRI	GAGGAG	4 cut(s)	145, 148, 339, 1667
BseSI	GKGCMC	1 cut(s)	2014
BseX3I	CGGCCG	1 cut(s)	114
BseXI	GCAGC	4 cut(s)	439, 826, 1804, 1930
BseYI	CCCAGC	1 cut(s)	1513
BsgI	GTGCAG	2 cut(s)	1345, 1803
Bsh1236I	CGCG	1 cut(s)	2019
Bsh1285I	CGRYCG	1 cut(s)	117
BshFI	GGCC	4 cut(s)	116, 189, 219, 1206
BshNI	GGYRCC	1 cut(s)	83
BsiEI	CGRYCG	1 cut(s)	117
BsiHKAI	GWGCWC	4 cut(s)	129, 710, 823, 1455
BsiSI	CCGG	5 cut(s)	87, 508, 568, 656, 1703
BslFI	GGGAC	2 cut(s)	1571, 1727
BslI	CCNNNNNNNGG	3 cut(s)	112, 235, 1525
BsmAI	GTCTC	5 cut(s)	115, 211, 1007, 1931, 1994
BsmBI	CGTCTC	1 cut(s)	115
BsmFI	GGGAC	2 cut(s)	1571, 1727
BsmI	GAATGC	1 cut(s)	1293
BsnI	GGCC	4 cut(s)	116, 189, 219, 1206
Bsp1286I	GDGCHC	5 cut(s)	129, 710, 823, 1455, 2014
Bsp1407I	TGTACA	1 cut(s)	2130
BspACI	CCGC	5 cut(s)	52, 186, 259, 1520, 1946
BspANI	GGCC	4 cut(s)	116, 189, 219, 1206
BspCNI	CTCAG	4 cut(s)	481, 722, 1278, 1570
BspFNI	CGCG	1 cut(s)	2019
BspLI	GGNNCC	6 cut(s)	36, 85, 654, 1125, 1161, 1265
BspMAI	CTGCAG	2 cut(s)	300, 608
BspMI	ACCTGC	1 cut(s)	303
BspPI	GGATC	7 cut(s)	692, 1114, 1154, 1167, 1559, 1743, 2023
BspQI	GCTCTTC	1 cut(s)	12
BspT107I	GGYRCC	1 cut(s)	83
BspTI	CTTAAG	1 cut(s)	1628
BsrBI	CCGCTC	1 cut(s)	259
BsrDI	GCAATG	2 cut(s)	845, 1394
BsrFI	RCCGGY	3 cut(s)	86, 567, 655
BsrGI	TGTACA	1 cut(s)	2130
BsrI	ACTGG	1 cut(s)	1127
BssAI	RCCGGY	3 cut(s)	86, 567, 655
BssECI	CCNNGG	1 cut(s)	220
BssNI	GRCGYC	4 cut(s)	84, 147, 269, 1386
BssSI	CACGAG	1 cut(s)	1200
Bst2BI	CACGAG	1 cut(s)	1200
Bst2UI	CCWGG	1 cut(s)	1696
Bst4CI	ACNGT	4 cut(s)	252, 367, 978, 1039
Bst6I	CTCTTC	3 cut(s)	12, 809, 1782
BstACI	GRCGYC	4 cut(s)	84, 147, 269, 1386
BstAFI	CTTAAG	1 cut(s)	1628
BstAPI	GCANNNNNTGC	1 cut(s)	2003
BstAUI	TGTACA	1 cut(s)	2130
BstC8I	GCNNGC	3 cut(s)	257, 340, 1191
BstDEI	CTNAG	4 cut(s)	468, 709, 1286, 1578
BstDSI	CCRYGG	1 cut(s)	220
BstF5I	GGATG	7 cut(s)	96, 198, 730, 1052, 1843, 1954, 1972
BstFNI	CGCG	1 cut(s)	2019
BstH2I	RGCGCY	1 cut(s)	87
BstHHI	GCGC	2 cut(s)	86, 2019
BstMAI	GTCTC	5 cut(s)	115, 211, 1007, 1931, 1994
BstMCI	CGRYCG	1 cut(s)	117
BstMWI	GCNNNNNNNGC	5 cut(s)	452, 603, 661, 1195, 2003
BstNI	CCWGG	1 cut(s)	1696
BstNSI	RCATGY	4 cut(s)	502, 880, 905, 2039
BstSCI	CCNGG	2 cut(s)	506, 1694
BstSFI	CTRYAG	2 cut(s)	296, 604
BstSLI	GKGCMC	1 cut(s)	2014
BstUI	CGCG	1 cut(s)	2019
BstV1I	GCAGC	4 cut(s)	439, 826, 1804, 1930
BstV2I	GAAGAC	2 cut(s)	297, 935
BstX2I	RGATCY	2 cut(s)	1159, 1564
BstXI	CCANNNNNNTGG	1 cut(s)	725
BstYI	RGATCY	2 cut(s)	1159, 1564
BstZI	CGGCCG	1 cut(s)	114
BsuRI	GGCC	4 cut(s)	116, 189, 219, 1206
BtgI	CCRYGG	1 cut(s)	220
BtsCI	GGATG	7 cut(s)	96, 198, 730, 1052, 1843, 1954, 1972
BtsI	GCAGTG	1 cut(s)	804
BtsIMutI	CAGTG	5 cut(s)	804, 987, 1134, 1544, 1575
BveI	ACCTGC	1 cut(s)	303
Cac8I	GCNNGC	3 cut(s)	257, 340, 1191
CaiI	CAGNNNCTG	2 cut(s)	670, 2003
CfoI	GCGC	2 cut(s)	86, 2019
Cfr10I	RCCGGY	3 cut(s)	86, 567, 655
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	2 cut(s)	1657, 2131
CviQI	GTAC	2 cut(s)	1657, 2131
DdeI	CTNAG	4 cut(s)	468, 709, 1286, 1578
DinI	GGCGCC	1 cut(s)	85
DriI	GACNNNNNGTC	1 cut(s)	298
EaeI	YGGCCR	3 cut(s)	114, 217, 1204
EagI	CGGCCG	1 cut(s)	114
Eam1104I	CTCTTC	3 cut(s)	12, 809, 1782
Eam1105I	GACNNNNNGTC	1 cut(s)	298
EarI	CTCTTC	3 cut(s)	12, 809, 1782
Ecl136II	GAGCTC	4 cut(s)	127, 708, 821, 1453
EclXI	CGGCCG	1 cut(s)	114
Eco24I	GRGCYC	4 cut(s)	129, 710, 823, 1455
Eco52I	CGGCCG	1 cut(s)	114
Eco53kI	GAGCTC	4 cut(s)	127, 708, 821, 1453
Eco57I	CTGAAG	2 cut(s)	1385, 1544
EcoICRI	GAGCTC	4 cut(s)	127, 708, 821, 1453
EcoRII	CCWGG	1 cut(s)	1694
EcoT22I	ATGCAT	1 cut(s)	1845
EcoT38I	GRGCYC	4 cut(s)	129, 710, 823, 1455
EgeI	GGCGCC	1 cut(s)	85
EheI	GGCGCC	1 cut(s)	85
Esp3I	CGTCTC	1 cut(s)	115
FalI	AAGNNNNNCTT	2 cut(s)	1915, 1947
FaqI	GGGAC	2 cut(s)	1571, 1727
FauI	CCCGC	1 cut(s)	1527
Fnu4HI	GCNGC	6 cut(s)	187, 260, 453, 840, 1818, 1944
FokI	GGATG	7 cut(s)	83, 185, 737, 1039, 1830, 1961, 1979
FriOI	GRGCYC	4 cut(s)	129, 710, 823, 1455
Fsp4HI	GCNGC	6 cut(s)	187, 260, 453, 840, 1818, 1944
FspBI	CTAG	7 cut(s)	56, 1071, 1224, 1343, 1646, 1985, 2120
GlaI	GCGC	2 cut(s)	85, 2018
GluI	GCNGC	6 cut(s)	187, 260, 453, 840, 1818, 1944
GsaI	CCCAGC	1 cut(s)	1517
HaeII	RGCGCY	1 cut(s)	87
HaeIII	GGCC	4 cut(s)	116, 189, 219, 1206
HapII	CCGG	5 cut(s)	87, 508, 568, 656, 1703
HgaI	GACGC	1 cut(s)	155
HhaI	GCGC	2 cut(s)	86, 2019
Hin1I	GRCGYC	4 cut(s)	84, 147, 269, 1386
Hin6I	GCGC	2 cut(s)	84, 2017
HinP1I	GCGC	2 cut(s)	84, 2017
HindIII	AAGCTT	2 cut(s)	684, 1438
HpaII	CCGG	5 cut(s)	87, 508, 568, 656, 1703
HphI	GGTGA	7 cut(s)	41, 101, 370, 379, 911, 949, 1883
Hpy166II	GTNNAC	2 cut(s)	73, 919
Hpy8I	GTNNAC	2 cut(s)	73, 919
HpyAV	CCTTC	7 cut(s)	436, 877, 1059, 1164, 1254, 1519, 1913
HpyCH4III	ACNGT	4 cut(s)	252, 367, 978, 1039
HpyCH4IV	ACGT	5 cut(s)	168, 269, 347, 1386, 1474
HpyF10VI	GCNNNNNNNGC	5 cut(s)	452, 603, 661, 1195, 2003
HpyF3I	CTNAG	4 cut(s)	468, 709, 1286, 1578
HpySE526I	ACGT	5 cut(s)	168, 269, 347, 1386, 1474
Hsp92I	GRCGYC	4 cut(s)	84, 147, 269, 1386
HspAI	GCGC	2 cut(s)	84, 2017
KasI	GGCGCC	1 cut(s)	83
LguI	GCTCTTC	1 cut(s)	12
LmnI	GCTCC	7 cut(s)	34, 124, 652, 661, 1010, 1030, 1300
Lsp1109I	GCAGC	4 cut(s)	439, 826, 1804, 1930
LweI	GCATC	4 cut(s)	866, 1109, 1852, 2138
MaeI	CTAG	7 cut(s)	56, 1071, 1224, 1343, 1646, 1985, 2120
MaeII	ACGT	5 cut(s)	168, 269, 347, 1386, 1474
MaeIII	GTNAC	5 cut(s)	361, 367, 398, 1508, 1854
MbiI	CCGCTC	1 cut(s)	259
MfeI	CAATTG	2 cut(s)	882, 1324
MflI	RGATCY	2 cut(s)	1159, 1564
MhlI	GDGCHC	5 cut(s)	129, 710, 823, 1455, 2014
MlsI	TGGCCA	1 cut(s)	1206
MluNI	TGGCCA	1 cut(s)	1206
Mly113I	GGCGCC	1 cut(s)	84
MlyI	GAGTC	2 cut(s)	71, 949
MmeI	TCCRAC	2 cut(s)	124, 234
Mox20I	TGGCCA	1 cut(s)	1206
Mph1103I	ATGCAT	1 cut(s)	1845
MroXI	GAANNNNTTC	2 cut(s)	488, 1150
MscI	TGGCCA	1 cut(s)	1206
MseI	TTAA	5 cut(s)	563, 1491, 1505, 1629, 2067
MslI	CAYNNNNRTG	5 cut(s)	588, 875, 906, 1373, 1491
Msp20I	TGGCCA	1 cut(s)	1206
MspA1I	CMGCKG	2 cut(s)	1522, 1817
MspCI	CTTAAG	1 cut(s)	1628
MspI	CCGG	5 cut(s)	87, 508, 568, 656, 1703
MspR9I	CCNGG	2 cut(s)	508, 1696
MunI	CAATTG	2 cut(s)	882, 1324
Mva1269I	GAATGC	1 cut(s)	1293
MvaI	CCWGG	1 cut(s)	1696
MvnI	CGCG	1 cut(s)	2019
MwoI	GCNNNNNNNGC	5 cut(s)	452, 603, 661, 1195, 2003
NarI	GGCGCC	1 cut(s)	84
NciI	CCSGG	1 cut(s)	508
NlaIV	GGNNCC	6 cut(s)	36, 85, 654, 1125, 1161, 1265
NmeAIII	GCCGAG	1 cut(s)	92
NmuCI	GTSAC	2 cut(s)	361, 367
NsiI	ATGCAT	1 cut(s)	1845
NspI	RCATGY	4 cut(s)	502, 880, 905, 2039
OliI	CACNNNNGTG	1 cut(s)	588
PciI	ACATGT	3 cut(s)	498, 876, 901
PciSI	GCTCTTC	1 cut(s)	12
PcsI	WCGNNNNNNNCGW	2 cut(s)	278, 371
PctI	GAATGC	1 cut(s)	1293
PdmI	GAANNNNTTC	2 cut(s)	488, 1150
PfeI	GAWTC	9 cut(s)	78, 225, 517, 667, 949, 989, 1079, 1151, 1571
PkrI	GCNGC	6 cut(s)	188, 261, 454, 841, 1819, 1945
PleI	GAGTC	2 cut(s)	70, 948
PluTI	GGCGCC	1 cut(s)	87
PpsI	GAGTC	2 cut(s)	70, 948
PscI	ACATGT	3 cut(s)	498, 876, 901
PsiI	TTATAA	2 cut(s)	414, 782
Psp124BI	GAGCTC	4 cut(s)	129, 710, 823, 1455
Psp6I	CCWGG	1 cut(s)	1694
PspFI	CCCAGC	1 cut(s)	1513
PspGI	CCWGG	1 cut(s)	1694
PspN4I	GGNNCC	6 cut(s)	36, 85, 654, 1125, 1161, 1265
PstI	CTGCAG	2 cut(s)	300, 608
PstNI	CAGNNNCTG	2 cut(s)	670, 2003
PsuI	RGATCY	2 cut(s)	1159, 1564
PvuII	CAGCTG	1 cut(s)	1817
RsaI	GTAC	2 cut(s)	1658, 2132
RsaNI	GTAC	2 cut(s)	1657, 2131
RseI	CAYNNNNRTG	5 cut(s)	588, 875, 906, 1373, 1491
SacI	GAGCTC	4 cut(s)	129, 710, 823, 1455
SapI	GCTCTTC	1 cut(s)	12
SaqAI	TTAA	5 cut(s)	563, 1491, 1505, 1629, 2067
SatI	GCNGC	6 cut(s)	187, 260, 453, 840, 1818, 1944
ScaI	AGTACT	1 cut(s)	1658
SchI	GAGTC	2 cut(s)	71, 949
ScrFI	CCNGG	2 cut(s)	508, 1696
SduI	GDGCHC	5 cut(s)	129, 710, 823, 1455, 2014
SfaNI	GCATC	4 cut(s)	866, 1109, 1852, 2138
SfcI	CTRYAG	2 cut(s)	296, 604
SfoI	GGCGCC	1 cut(s)	85
SgrAI	CRCCGGYG	1 cut(s)	86
SmiMI	CAYNNNNRTG	5 cut(s)	588, 875, 906, 1373, 1491
SmlI	CTYRAG	2 cut(s)	1441, 1628
SmoI	CTYRAG	2 cut(s)	1441, 1628
SpeI	ACTAGT	1 cut(s)	1984
SsiI	CCGC	5 cut(s)	52, 186, 259, 1520, 1946
SspDI	GGCGCC	1 cut(s)	83
SspMI	CTAG	7 cut(s)	56, 1071, 1224, 1343, 1646, 1985, 2120
SstI	GAGCTC	4 cut(s)	129, 710, 823, 1455
StyD4I	CCNGG	2 cut(s)	506, 1694
TaaI	ACNGT	4 cut(s)	252, 367, 978, 1039
TaiI	ACGT	5 cut(s)	171, 272, 350, 1389, 1477
TatI	WGTACW	2 cut(s)	1656, 2130
TauI	GCSGC	2 cut(s)	189, 262
TfiI	GAWTC	9 cut(s)	78, 225, 517, 667, 949, 989, 1079, 1151, 1571
Tru1I	TTAA	5 cut(s)	563, 1491, 1505, 1629, 2067
Tru9I	TTAA	5 cut(s)	563, 1491, 1505, 1629, 2067
TscAI	CASTG	5 cut(s)	811, 987, 1134, 1551, 1582
TseFI	GTSAC	2 cut(s)	361, 367
TseI	GCWGC	4 cut(s)	452, 839, 1817, 1943
Tsp45I	GTSAC	2 cut(s)	361, 367
TspGWI	ACGGA	4 cut(s)	47, 55, 237, 690
TspRI	CASTG	5 cut(s)	811, 987, 1134, 1551, 1582
Vha464I	CTTAAG	1 cut(s)	1628
XapI	RAATTY	4 cut(s)	45, 1687, 1748, 2077
XceI	RCATGY	4 cut(s)	502, 880, 905, 2039
XcmI	CCANNNNNNNNNTGG	1 cut(s)	310
XmnI	GAANNNNTTC	2 cut(s)	488, 1150
XspI	CTAG	7 cut(s)	56, 1071, 1224, 1343, 1646, 1985, 2120
ZraI	GACGTC	2 cut(s)	270, 1387
ZrmI	AGTACT	1 cut(s)	1658
Zsp2I	ATGCAT	1 cut(s)	1845

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.