Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001742

Physical Location & Seq

Genomic Coordinates Forward (+)

19053002 .. 19064245

Gene Structure 11244 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGTGCTTTCAGATTGAGAACTTATTCTATAACATGTCTGCCCGGAGAAAGAATCTGCAAAACTCTGCTGATGATTATTCAAAGATTGTTGATTTGTTAAGCCGGTTTGCCATTCATCACACAAGTGTTAGCTTCTCCTGCAGAAAGCATGGAGCCGGTAGAGCGGATGTTAGTTCTGTTGCCACAATATCAAGAATTGATGCGATTCGTTCAGTTTACGGGGTGTCAGTTGCCCGCAGTCTGATGAAAGTAGAAGCTTTGGACAATGATCCGTCAAGCTCAGTTTTCCAGATGGATGGCTTTATCTCCAATTCTGAATATGTTGCGAAGAAGATAACTATGGTGCTTTTTATAAACGATAGATTGGTGGATTGTACTGCATTGAAGAGAGCGCTAGAAATTGTTTATGCCGCTACATTGCCGAAAGCCGCAAAACCCTTCATATACATGTCAATTGTATTACCACCTGAACATGTTGATGTGAATGTTCACCCAACAAAGAGAGAGGTGAGTCTTCTGAATCAGGAAGTGATCATTGAGAAGATACAGTCAGTGGTTGAATCAAGATTGAGAAGCTCCAATGAGACGCAGATATTTCAGGAGCAGACAGTTGAACCACCTTCATCCAGCCAAATGATTTCTAGCAAGGATTCAAATCGTAATCCTACGGCATCTGGGTCAAAATCACAAAAGGTTCCAGTGAATAAAATGGTCAGAACAGATTCATCAGATCCTGCTGGAAGGTTGCATATTTACTTGCACGCAGAGTCTCGTGGCCATCTTGAAAAGAATACTAGTTTGACTGCTGTTAGATCGTCTGTTAGACAAAGAAGGAACCCAAAGGAAACTGCTGATCTGAGTAGCGTTCAGGAGCTTATTGCTGATATTGATAGCAATTGTCATTCTGGTATGCTAGACATTGTGAGACACTGCACATACATTGGAATGGCAGATGATGTCTTTGCATTGCTTCAGCATGACACGCACCTCTACCTTGCAAATATAGTGAGCTTGAGCAAAGAGCTCATGTATCAGCAAGTTCTACGTCGATTTGCTCATTTTAATGCTATACAATTAAGTAACCCAGCCCCGCTGAAGGAGTTGATTGTGTTGGCACTGAAAGAGGGGGACACAGATCCAGAATCCACTGAGAATGATGAACTAAATGAAAAGATTGCAGAAATGAATTCAGAACTACTTAAGCAAAAGGCTGATCTACTAGAGGAGTACTTTTCCATTCACATAGATAAAGATGGAAATTTGTCCAGGCTTCCTGTCATACTTGACCAATACACACCTGACATGGATCGTGTCCCGGAATTTGCGCTTTGTTTGGGCAACGATGTTGATTGGGAAGAAGAGAAAAAATGCTTCCAAGTAATTTCAGCTGCACTTGGGAACTTTTACGCCATGCATCCTCCTATGTTACCCAACCCATCTGGTGATGGTTTGCAATTTTACCAAAAAAGGAAGTTGTTCAGGAATAATGAAGGAAGTCTCTCTTGCAATACTGGTGCGGATGATATGATGACGGAGGACGAAATCGAGCACGAACTAGTTGCAGAAGCAGAGACTGCATGGGCACAGCGCGAATGGTCAATCCAGCATGTATTGTTTCCATCAGTGAGGCTCTTTTTTAAGCCACCAAATTCTATGGCTACAAATGGAACATTTGTTCGAGTTGCTTCACTAGAAAAGCTGTACAGGATTTTTGAAAGATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000793 GO:0000794 GO:0000795 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005712 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0031974 GO:0031981 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0090304 GO:0090351 GO:0097159 GO:0099086 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko03460 ko05200 ko05210 ko05213 ko05226 map01524 map03430 map03460 map05200 map05210 map05213 map05226

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 Mlh1_C

Protein Analysis

575

Amino Acids

64.77

Weight (kDa)

5.7

Isoelectric Point (pI)

48.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_mis_repair	PF01119	69 - 190	1.2e-28	DNA mismatch repair protein, C-terminal domain
Mlh1_C	PF16413	286 - 574	1.3e-82	DNA mismatch repair protein Mlh1 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09140 AT4G09140
fragaria_vesca	FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560
malus_domestica	MD12G1033300.v1.1 MD14G1034200.v1.1
prunus_persica	Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1
pyrus_communis	pycom12g01730 pycom12g03050
rosa_chinensis	RchiOBHm_Chr3g0494621 RchiOBHm_Chr7g0226931 RchiOBHm_Chr7g0226941
rosa_laevigata	RLG00000001681
rosa_multiflora	Rmu_co8507019.1_g000001 Rmu_sc0000356.1_g000011 Rmu_sc0002762.1_g000004 Rmu_sc0008925.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018710 Rroxscaffold_3G00232410 Rroxscaffold_6G00391010
rosa_rugosa	Rorug03G0266200 Rorug07G0240400
rosa_samantha	Rh3AG316100 Rh3BG351600 Rh3CG348200 Rh3DG350800 Rh7AG388700 Rh7BG374500 Rh7BG374700 Rh7CG407900 Rh7DG386700
rosa_wichuraiana	Rw3G027600 Rw7G032590 Rw7G032610 Rw7G032620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	353
AccBSI	CCGCTC	1 cut(s)	164
AccII	CGCG	1 cut(s)	1590
AciI	CCGC	6 cut(s)	164, 235, 411, 429, 1091, 1517
AclWI	GGATC	4 cut(s)	263, 725, 1130, 1314
AcoI	YGGCCR	1 cut(s)	775
AcsI	RAATTY	4 cut(s)	1186, 1258, 1319, 1648
AcuI	CTGAAG	2 cut(s)	956, 1115
AfaI	GTAC	3 cut(s)	376, 1229, 1703
AfeI	AGCGCT	1 cut(s)	393
AfiI	CCNNNNNNNGG	1 cut(s)	1096
AflII	CTTAAG	1 cut(s)	1199
AflIII	ACRYGT	3 cut(s)	33, 447, 472
AgsI	TTSAA	7 cut(s)	81, 385, 560, 614, 654, 785, 1715
AhlI	ACTAGT	2 cut(s)	794, 1555
AjnI	CCWGG	1 cut(s)	1265
AleI	CACNNNNGTG	1 cut(s)	123
AloI	GAACNNNNNNTCC	2 cut(s)	1659, 1691
AluBI	AGCT	9 cut(s)	132, 257, 279, 576, 874, 1011, 1024, 1388, 1699
AluI	AGCT	9 cut(s)	132, 257, 279, 576, 874, 1011, 1024, 1388, 1699
Alw21I	GWGCWC	2 cut(s)	1026, 1551
Alw26I	GTCTC	5 cut(s)	578, 774, 919, 1502, 1565
AlwI	GGATC	4 cut(s)	263, 725, 1130, 1314
AlwNI	CAGNNNCTG	2 cut(s)	734, 1574
Aor51HI	AGCGCT	1 cut(s)	393
AoxI	GGCC	1 cut(s)	775
ApeKI	GCWGC	1 cut(s)	1388
ApoI	RAATTY	4 cut(s)	1186, 1258, 1319, 1648
Asp700I	GAANNNNTTC	3 cut(s)	23, 721, 1475
AspLEI	GCGC	3 cut(s)	394, 1327, 1590
AsuC2I	CCSGG	2 cut(s)	43, 1316
AsuHPI	GGTGA	3 cut(s)	482, 520, 1454
BaeGI	GKGCMC	1 cut(s)	1585
BalI	TGGCCA	1 cut(s)	777
BanII	GRGCYC	1 cut(s)	1026
BauI	CACGAG	1 cut(s)	771
BbsI	GAAGAC	1 cut(s)	506
Bbv12I	GWGCWC	2 cut(s)	1026, 1551
BbvI	GCAGC	1 cut(s)	1375
BccI	CCATC	7 cut(s)	286, 290, 786, 1247, 1439, 1444, 1627
BceAI	ACGGC	1 cut(s)	684
BcgI	CGANNNNNNTGC	2 cut(s)	1541, 1575
BciT130I	CCWGG	1 cut(s)	1267
BclI	TGATCA	1 cut(s)	531
BcnI	CCSGG	2 cut(s)	43, 1316
BcoDI	GTCTC	5 cut(s)	578, 774, 919, 1502, 1565
BcuI	ACTAGT	2 cut(s)	794, 1555
BfaI	CTAG	7 cut(s)	395, 642, 795, 914, 1220, 1556, 1691
BfmI	CTRYAG	1 cut(s)	139
BfoI	RGCGCY	1 cut(s)	395
BfrI	CTTAAG	1 cut(s)	1199
BisI	GCNGC	3 cut(s)	411, 429, 1389
BlsI	GCNGC	3 cut(s)	412, 430, 1390
BmcAI	AGTACT	1 cut(s)	1229
Bme1390I	CCNGG	3 cut(s)	43, 1267, 1316
BmiI	GGNNCC	3 cut(s)	154, 696, 836
BmrFI	CCNGG	3 cut(s)	43, 1267, 1316
BmsI	GCATC	4 cut(s)	190, 680, 1423, 1709
BpiI	GAAGAC	1 cut(s)	506
BpuEI	CTTGAG	1 cut(s)	1033
BpuMI	CCSGG	2 cut(s)	43, 1316
BsaBI	GATNNNNATC	1 cut(s)	654
Bsc4I	CCNNNNNNNGG	1 cut(s)	1096
Bse118I	RCCGGY	2 cut(s)	102, 155
Bse1I	ACTGG	2 cut(s)	698, 1516
Bse3DI	GCAATG	2 cut(s)	416, 965
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	1 cut(s)	1267
BseGI	GGATG	5 cut(s)	172, 301, 623, 1414, 1525
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	1 cut(s)	1096
BseMI	GCAATG	2 cut(s)	416, 965
BseMII	CTCAG	3 cut(s)	294, 848, 1140
BseNI	ACTGG	2 cut(s)	698, 1516
BseRI	GAGGAG	1 cut(s)	1238
BseSI	GKGCMC	1 cut(s)	1585
BseXI	GCAGC	1 cut(s)	1375
BseYI	CCCAGC	1 cut(s)	1084
BsgI	GTGCAG	2 cut(s)	916, 1374
Bsh1236I	CGCG	1 cut(s)	1590
BshFI	GGCC	1 cut(s)	777
BsiHKAI	GWGCWC	2 cut(s)	1026, 1551
BsiSI	CCGG	4 cut(s)	43, 103, 156, 1316
BslFI	GGGAC	2 cut(s)	1142, 1298
BslI	CCNNNNNNNGG	1 cut(s)	1096
BsmAI	GTCTC	5 cut(s)	578, 774, 919, 1502, 1565
BsmBI	CGTCTC	1 cut(s)	578
BsmFI	GGGAC	2 cut(s)	1142, 1298
BsnI	GGCC	1 cut(s)	777
Bsp1286I	GDGCHC	3 cut(s)	1026, 1551, 1585
Bsp1407I	TGTACA	1 cut(s)	1701
Bsp143I	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
BspACI	CCGC	6 cut(s)	164, 235, 411, 429, 1091, 1517
BspANI	GGCC	1 cut(s)	777
BspCNI	CTCAG	3 cut(s)	293, 849, 1141
BspFNI	CGCG	1 cut(s)	1590
BspLI	GGNNCC	3 cut(s)	154, 696, 836
BspMAI	CTGCAG	1 cut(s)	143
BspPI	GGATC	4 cut(s)	263, 725, 1130, 1314
BspTI	CTTAAG	1 cut(s)	1199
BsrBI	CCGCTC	1 cut(s)	164
BsrDI	GCAATG	2 cut(s)	416, 965
BsrFI	RCCGGY	2 cut(s)	102, 155
BsrGI	TGTACA	1 cut(s)	1701
BsrI	ACTGG	2 cut(s)	698, 1516
BssAI	RCCGGY	2 cut(s)	102, 155
BssMI	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
BssSI	CACGAG	1 cut(s)	771
Bst2BI	CACGAG	1 cut(s)	771
Bst2UI	CCWGG	1 cut(s)	1267
Bst4CI	ACNGT	2 cut(s)	549, 610
Bst6I	CTCTTC	2 cut(s)	380, 1353
BstAFI	CTTAAG	1 cut(s)	1199
BstAPI	GCANNNNNTGC	1 cut(s)	1574
BstAUI	TGTACA	1 cut(s)	1701
BstC8I	GCNNGC	2 cut(s)	235, 762
BstDEI	CTNAG	3 cut(s)	280, 857, 1149
BstF5I	GGATG	5 cut(s)	172, 301, 623, 1414, 1525
BstFNI	CGCG	1 cut(s)	1590
BstH2I	RGCGCY	1 cut(s)	395
BstHHI	GCGC	3 cut(s)	394, 1327, 1590
BstKTI	GATC	8 cut(s)	271, 534, 733, 815, 856, 1138, 1216, 1309
BstMAI	GTCTC	5 cut(s)	578, 774, 919, 1502, 1565
BstMBI	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
BstMWI	GCNNNNNNNGC	4 cut(s)	138, 161, 982, 1574
BstNI	CCWGG	1 cut(s)	1267
BstNSI	RCATGY	4 cut(s)	37, 451, 476, 1610
BstSCI	CCNGG	3 cut(s)	41, 1265, 1314
BstSFI	CTRYAG	1 cut(s)	139
BstSLI	GKGCMC	1 cut(s)	1585
BstUI	CGCG	1 cut(s)	1590
BstV1I	GCAGC	1 cut(s)	1375
BstV2I	GAAGAC	1 cut(s)	506
BstX2I	RGATCY	2 cut(s)	730, 1135
BstXI	CCANNNNNNTGG	1 cut(s)	296
BstYI	RGATCY	2 cut(s)	730, 1135
BsuRI	GGCC	1 cut(s)	777
BtsCI	GGATG	5 cut(s)	172, 301, 623, 1414, 1525
BtsI	GCAGTG	1 cut(s)	928
BtsIMutI	CAGTG	6 cut(s)	558, 705, 928, 1115, 1146, 1629
Cac8I	GCNNGC	2 cut(s)	235, 762
CaiI	CAGNNNCTG	2 cut(s)	734, 1574
CfoI	GCGC	3 cut(s)	394, 1327, 1590
Cfr10I	RCCGGY	2 cut(s)	102, 155
CseI	GACGC	1 cut(s)	595
Csp6I	GTAC	3 cut(s)	375, 1228, 1702
CviQI	GTAC	3 cut(s)	375, 1228, 1702
DdeI	CTNAG	3 cut(s)	280, 857, 1149
DpnI	GATC	8 cut(s)	270, 533, 732, 814, 855, 1137, 1215, 1308
DpnII	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
EaeI	YGGCCR	1 cut(s)	775
Eam1104I	CTCTTC	2 cut(s)	380, 1353
EarI	CTCTTC	2 cut(s)	380, 1353
Ecl136II	GAGCTC	1 cut(s)	1024
Eco24I	GRGCYC	1 cut(s)	1026
Eco47III	AGCGCT	1 cut(s)	393
Eco53kI	GAGCTC	1 cut(s)	1024
Eco57I	CTGAAG	2 cut(s)	956, 1115
EcoICRI	GAGCTC	1 cut(s)	1024
EcoRI	GAATTC	1 cut(s)	1186
EcoRII	CCWGG	1 cut(s)	1265
EcoT22I	ATGCAT	1 cut(s)	1416
EcoT38I	GRGCYC	1 cut(s)	1026
Esp3I	CGTCTC	1 cut(s)	578
FalI	AAGNNNNNCTT	2 cut(s)	1486, 1518
FaqI	GGGAC	2 cut(s)	1142, 1298
FauI	CCCGC	2 cut(s)	242, 1098
FbaI	TGATCA	1 cut(s)	531
Fnu4HI	GCNGC	3 cut(s)	411, 429, 1389
FokI	GGATG	5 cut(s)	179, 308, 610, 1401, 1532
FriOI	GRGCYC	1 cut(s)	1026
Fsp4HI	GCNGC	3 cut(s)	411, 429, 1389
FspBI	CTAG	7 cut(s)	395, 642, 795, 914, 1220, 1556, 1691
GlaI	GCGC	3 cut(s)	393, 1326, 1589
GluI	GCNGC	3 cut(s)	411, 429, 1389
GsaI	CCCAGC	1 cut(s)	1088
HaeII	RGCGCY	1 cut(s)	395
HaeIII	GGCC	1 cut(s)	777
HapII	CCGG	4 cut(s)	43, 103, 156, 1316
HgaI	GACGC	1 cut(s)	595
HhaI	GCGC	3 cut(s)	394, 1327, 1590
Hin6I	GCGC	3 cut(s)	392, 1325, 1588
HinP1I	GCGC	3 cut(s)	392, 1325, 1588
HindIII	AAGCTT	1 cut(s)	255
HinfI	GANTC	9 cut(s)	52, 205, 511, 520, 560, 650, 722, 767, 1142
HpaII	CCGG	4 cut(s)	43, 103, 156, 1316
HphI	GGTGA	3 cut(s)	482, 520, 1454
Hpy166II	GTNNAC	2 cut(s)	217, 490
Hpy188I	TCNGA	8 cut(s)	12, 243, 316, 519, 716, 730, 858, 1192
Hpy188III	TCNNGA	9 cut(s)	192, 289, 524, 564, 599, 782, 869, 1139, 1480
Hpy8I	GTNNAC	2 cut(s)	217, 490
Hpy99I	CGWCG	1 cut(s)	1050
HpyAV	CCTTC	6 cut(s)	448, 630, 735, 825, 1090, 1484
HpyCH4III	ACNGT	2 cut(s)	549, 610
HpyCH4IV	ACGT	1 cut(s)	1045
HpyF10VI	GCNNNNNNNGC	4 cut(s)	138, 161, 982, 1574
HpyF3I	CTNAG	3 cut(s)	280, 857, 1149
HpySE526I	ACGT	1 cut(s)	1045
HspAI	GCGC	3 cut(s)	392, 1325, 1588
Ksp22I	TGATCA	1 cut(s)	531
Kzo9I	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
LmnI	GCTCC	4 cut(s)	152, 581, 601, 871
Lsp1109I	GCAGC	1 cut(s)	1375
LweI	GCATC	4 cut(s)	190, 680, 1423, 1709
MaeI	CTAG	7 cut(s)	395, 642, 795, 914, 1220, 1556, 1691
MaeII	ACGT	1 cut(s)	1045
MaeIII	GTNAC	2 cut(s)	1079, 1425
MalI	GATC	8 cut(s)	270, 533, 732, 814, 855, 1137, 1215, 1308
MbiI	CCGCTC	1 cut(s)	164
MboI	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
MboII	GAAGA	7 cut(s)	340, 343, 397, 506, 553, 1367, 1370
MfeI	CAATTG	2 cut(s)	453, 895
MflI	RGATCY	2 cut(s)	730, 1135
MhlI	GDGCHC	3 cut(s)	1026, 1551, 1585
MlsI	TGGCCA	1 cut(s)	777
MluNI	TGGCCA	1 cut(s)	777
MlyI	GAGTC	2 cut(s)	520, 776
MnlI	CCTC	7 cut(s)	499, 998, 1117, 1216, 1428, 1528, 1620
Mox20I	TGGCCA	1 cut(s)	777
Mph1103I	ATGCAT	1 cut(s)	1416
MroXI	GAANNNNTTC	3 cut(s)	23, 721, 1475
MscI	TGGCCA	1 cut(s)	777
MseI	TTAA	5 cut(s)	98, 1062, 1076, 1200, 1638
MslI	CAYNNNNRTG	5 cut(s)	123, 446, 477, 944, 1062
Msp20I	TGGCCA	1 cut(s)	777
MspA1I	CMGCKG	2 cut(s)	1093, 1388
MspCI	CTTAAG	1 cut(s)	1199
MspI	CCGG	4 cut(s)	43, 103, 156, 1316
MspR9I	CCNGG	3 cut(s)	43, 1267, 1316
MunI	CAATTG	2 cut(s)	453, 895
MvaI	CCWGG	1 cut(s)	1267
MvnI	CGCG	1 cut(s)	1590
MwoI	GCNNNNNNNGC	4 cut(s)	138, 161, 982, 1574
NciI	CCSGG	2 cut(s)	43, 1316
NdeII	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
NlaIV	GGNNCC	3 cut(s)	154, 696, 836
NsiI	ATGCAT	1 cut(s)	1416
NspI	RCATGY	4 cut(s)	37, 451, 476, 1610
OliI	CACNNNNGTG	1 cut(s)	123
PciI	ACATGT	3 cut(s)	33, 447, 472
PdmI	GAANNNNTTC	3 cut(s)	23, 721, 1475
PfeI	GAWTC	7 cut(s)	52, 205, 520, 560, 650, 722, 1142
PfoI	TCCNGGA	1 cut(s)	1314
PkrI	GCNGC	3 cut(s)	412, 430, 1390
PleI	GAGTC	2 cut(s)	519, 775
PpsI	GAGTC	2 cut(s)	519, 775
PscI	ACATGT	3 cut(s)	33, 447, 472
PsiI	TTATAA	1 cut(s)	353
Psp124BI	GAGCTC	1 cut(s)	1026
Psp6I	CCWGG	1 cut(s)	1265
PspFI	CCCAGC	1 cut(s)	1084
PspGI	CCWGG	1 cut(s)	1265
PspN4I	GGNNCC	3 cut(s)	154, 696, 836
PstI	CTGCAG	1 cut(s)	143
PstNI	CAGNNNCTG	2 cut(s)	734, 1574
PsuI	RGATCY	2 cut(s)	730, 1135
PvuII	CAGCTG	1 cut(s)	1388
RsaI	GTAC	3 cut(s)	376, 1229, 1703
RsaNI	GTAC	3 cut(s)	375, 1228, 1702
RseI	CAYNNNNRTG	5 cut(s)	123, 446, 477, 944, 1062
SacI	GAGCTC	1 cut(s)	1026
SaqAI	TTAA	5 cut(s)	98, 1062, 1076, 1200, 1638
SatI	GCNGC	3 cut(s)	411, 429, 1389
Sau3AI	GATC	8 cut(s)	268, 531, 730, 812, 853, 1135, 1213, 1306
ScaI	AGTACT	1 cut(s)	1229
SchI	GAGTC	2 cut(s)	520, 776
ScrFI	CCNGG	3 cut(s)	43, 1267, 1316
SduI	GDGCHC	3 cut(s)	1026, 1551, 1585
SfaNI	GCATC	4 cut(s)	190, 680, 1423, 1709
SfcI	CTRYAG	1 cut(s)	139
SmiMI	CAYNNNNRTG	5 cut(s)	123, 446, 477, 944, 1062
SmlI	CTYRAG	2 cut(s)	1012, 1199
SmoI	CTYRAG	2 cut(s)	1012, 1199
SpeI	ACTAGT	2 cut(s)	794, 1555
SsiI	CCGC	6 cut(s)	164, 235, 411, 429, 1091, 1517
SspMI	CTAG	7 cut(s)	395, 642, 795, 914, 1220, 1556, 1691
SstI	GAGCTC	1 cut(s)	1026
StyD4I	CCNGG	3 cut(s)	41, 1265, 1314
TaaI	ACNGT	2 cut(s)	549, 610
TaiI	ACGT	1 cut(s)	1048
TaqI	TCGA	3 cut(s)	1048, 1545, 1678
TatI	WGTACW	3 cut(s)	374, 1227, 1701
TauI	GCSGC	2 cut(s)	413, 431
TfiI	GAWTC	7 cut(s)	52, 205, 520, 560, 650, 722, 1142
Tru1I	TTAA	5 cut(s)	98, 1062, 1076, 1200, 1638
Tru9I	TTAA	5 cut(s)	98, 1062, 1076, 1200, 1638
TscAI	CASTG	6 cut(s)	558, 705, 935, 1122, 1153, 1629
TseI	GCWGC	1 cut(s)	1388
TspDTI	ATGAA	9 cut(s)	104, 260, 430, 612, 714, 1173, 1182, 1199, 1503
TspGWI	ACGGA	2 cut(s)	261, 1547
TspRI	CASTG	6 cut(s)	558, 705, 935, 1122, 1153, 1629
Vha464I	CTTAAG	1 cut(s)	1199
XapI	RAATTY	4 cut(s)	1186, 1258, 1319, 1648
XceI	RCATGY	4 cut(s)	37, 451, 476, 1610
XmnI	GAANNNNTTC	3 cut(s)	23, 721, 1475
XspI	CTAG	7 cut(s)	395, 642, 795, 914, 1220, 1556, 1691
ZrmI	AGTACT	1 cut(s)	1229
Zsp2I	ATGCAT	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.