Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0001742

Physical Location & Seq

Genomic Coordinates Forward (+)

41100945 .. 41112039

Gene Structure 11095 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG351600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGGGTTTCGAGGAGAAGCTCTTGCGAGCATGACGTATGTGGCTCATGTGACGGTGACGACGATCACCAAAGGGCAGTTGCATGGTTACAGGGTTTCTTATAAAGATGGAGTGATGGAGAATGAGCCGAAGGCGTGTGCTGCCGTAAAAGGAACTCAGATAATGATTGAGAACTTATTCTATAACATGTCTGCCCGGAGAAAGAATCTGCAAAATGCTGCTGATGATTATTCAAAGATTGTAGATTTGTTAAGCCGGTTTGCCATTCATCACACAAGTGTTAGCTTCTCCTGCAGAAAGCATGGAGCCGGTAGAGCAGATGTTAGTTCTGTTGCCACAATATCAAGAATTGATGCGATTCGTTCAGTTTACGGGGTGTCAGTTGCCCGCAGTCTGATGAAAGTAGAAGCTTTGGACAATGATCCGTCAAGCTCAGTTTTCCAGATGGATGGCTTTATCTCCAATTCTGAATATGTTGCGAAGAAGATAACTATGGTGCTTTTTATAAACGATAGATTGGTGGATTGCACTGCATTGAAGAGAGCTCTAGAAATTGTTTATGCCGCTACATTGCCGAAAGCAGCAAAACCCTTCATATACATGTCAATTGTATTACCACCTGAACATGTTGATGTGAATGTTCACCCAACAAAGAGAGAGGTGAGTCTTCTGAATCAGGAAGTCATCATTGAGAAGATACAGTCAGTGGTTGAATCAAGATTGAGAAGCTCCAATGAGACACAGATATTTCAGGAGCAGACAGTTGAACCACCTTCTTCCAGCCAAATGATTTCTAGCAAGGATTCAAATCGTAATCGTACGCCATCTGGGTCAAAATCACAAAAGGTTCCAGTGAATAAAATGGTCAGAACAGATTCATCGGATCCTGCTGGAAGGTTGCATATTTACTTGCACGCAGAGTCTCGTGGCCATCTTGAAAAGAATACTTGCTTGACTGCTGTTAGATCGTCTGTTAGACAAAGAAGGAACCCAAAGGAAACTGCTGATCTGAGTAGCGTTCAGGAGCTTATTGCTGATATTGATAGCAATTGTCATTCTGGTATGCTAGACATTGTGAGACACTGCACATACATTGGAATGGCAGATGACGTCTTTGCATTGCTTCAGCATGACACACACCTCTACCTTGCAAATATAGTGAGCTTGAGCAAAGAGCTCATGTATCAGCAAGTTCTATGTCGATTTGCTCATTTTAATGCTATACAATTAAGTAACCCAGCCCCGCTGAAGGAGTTGATTGTGTTGGCACTGAAAGAGGGGGACACAGATCCAGAATCCACTGAGAATGATGAACTAAATGAAAAGATTGCAGAAATGAATTCAGAACTACTTAAGCAAAAGGCTGATCTACTAGAGGAGTACTTTTCCATTCACATAGATAAAGTTGGAAATTTGTCCAGGCTTCCTGTCATACTTGACCAATACACACCTGACATGGATCGTGTCCCAGAATTTGCGCTTTGTTTGGGCAACGATGTTGATTGGGAAGAAGAGAAAAAATGCTTCCAAGTAATTTCAGCTGCACTTGGGAACTTTTACGCCATGCATCCTCCTATGTTACCCAACCCATCTGGTGATGGTTTGCAATTTTACCAAAAAAGGAAGTTGTTCAGGAATAATGAAGGAAGTCTCTCTTGCAATACTGGTGCGGATGATATGATGACGGAGGACGAAATCGAGCATGAACTAGTTGCAGAAGCAGAGACTGCATGGGCACAGCGCGAATGGTCAATCCAGCATGTATTGTTTCCATCAATGAGGCTCTTTTTTAAGCCACCAAATTCTATGGCTACAAATGGAACATTTGTTCGAGTAAGTTACTTTTCTTGGGATACCTTAATTTACTTGATTCTTGAGTTAACCCAAGAAGTCAATAAACTCATGTATGATGAGCTAGCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000793 GO:0000794 GO:0000795 GO:0002200 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002566 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005712 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0016445 GO:0016446 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0031974 GO:0031981 GO:0032300 GO:0032389 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070013 GO:0071704 GO:0090304 GO:0090351 GO:0097159 GO:0099086 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko03460 ko05200 ko05210 ko05213 ko05226 map01524 map03430 map03460 map05200 map05210 map05213 map05226

Pfam Domains

Protein Families

DNA_mis_repair HATPase_c_3 Mlh1_C

Protein Analysis

641

Amino Acids

72.21

Weight (kDa)

5.68

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_mis_repair	PF01119	120 - 241	1.4e-28	DNA mismatch repair protein, C-terminal domain
Mlh1_C	PF16413	337 - 613	2.5e-71	DNA mismatch repair protein Mlh1 C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001742)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09140 AT4G09140
fragaria_vesca	FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560 FvH4_5g31560
malus_domestica	MD12G1033300.v1.1 MD14G1034200.v1.1
prunus_persica	Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1 Prupe.1G555900_v2.0.a1
pyrus_communis	pycom12g01730 pycom12g03050
rosa_chinensis	RchiOBHm_Chr3g0494621 RchiOBHm_Chr7g0226931 RchiOBHm_Chr7g0226941
rosa_laevigata	RLG00000001681
rosa_multiflora	Rmu_co8507019.1_g000001 Rmu_sc0000356.1_g000011 Rmu_sc0002762.1_g000004 Rmu_sc0008925.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018710 Rroxscaffold_3G00232410 Rroxscaffold_6G00391010
rosa_rugosa	Rorug03G0266200 Rorug07G0240400
rosa_samantha	Rh3AG316100 Rh3BG351600 Rh3CG348200 Rh3DG350800 Rh7AG388700 Rh7BG374500 Rh7BG374700 Rh7CG407900 Rh7DG386700
rosa_wichuraiana	Rw3G027600 Rw7G032590 Rw7G032610 Rw7G032620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	102, 506
AatII	GACGTC	1 cut(s)	1113
AccII	CGCG	1 cut(s)	1743
AciI	CCGC	4 cut(s)	388, 564, 1244, 1670
AclWI	GGATC	5 cut(s)	416, 878, 891, 1283, 1467
AcoI	YGGCCR	1 cut(s)	928
AcsI	RAATTY	4 cut(s)	1339, 1411, 1472, 1801
AcuI	CTGAAG	2 cut(s)	1109, 1268
AcyI	GRCGYC	1 cut(s)	1110
AfaI	GTAC	2 cut(s)	820, 1382
AfiI	CCNNNNNNNGG	1 cut(s)	1249
AflII	CTTAAG	1 cut(s)	1352
AflIII	ACRYGT	3 cut(s)	186, 600, 625
AgsI	TTSAA	6 cut(s)	234, 538, 713, 767, 807, 938
AhlI	ACTAGT	1 cut(s)	1708
AjnI	CCWGG	1 cut(s)	1418
AleI	CACNNNNGTG	1 cut(s)	276
AloI	GAACNNNNNNTCC	2 cut(s)	1812, 1844
Alw21I	GWGCWC	2 cut(s)	547, 1179
Alw26I	GTCTC	5 cut(s)	731, 927, 1072, 1655, 1718
AlwI	GGATC	5 cut(s)	416, 878, 891, 1283, 1467
AlwNI	CAGNNNCTG	1 cut(s)	1727
AoxI	GGCC	1 cut(s)	928
ApeKI	GCWGC	4 cut(s)	140, 218, 581, 1541
ApoI	RAATTY	4 cut(s)	1339, 1411, 1472, 1801
Asp700I	GAANNNNTTC	3 cut(s)	176, 874, 1628
AspLEI	GCGC	2 cut(s)	1480, 1743
AsuC2I	CCSGG	1 cut(s)	196
AsuHPI	GGTGA	5 cut(s)	58, 67, 635, 673, 1607
AsuNHI	GCTAGC	1 cut(s)	1915
BaeGI	GKGCMC	1 cut(s)	1738
BalI	TGGCCA	1 cut(s)	930
BamHI	GGATCC	1 cut(s)	883
BanII	GRGCYC	2 cut(s)	547, 1179
BauI	CACGAG	1 cut(s)	924
BbsI	GAAGAC	1 cut(s)	659
Bbv12I	GWGCWC	2 cut(s)	547, 1179
BbvI	GCAGC	4 cut(s)	127, 205, 593, 1528
BccI	CCATC	9 cut(s)	101, 109, 439, 443, 832, 939, 1592, 1597, 1780
BceAI	ACGGC	1 cut(s)	128
BciT130I	CCWGG	1 cut(s)	1420
BciVI	GTATCC	1 cut(s)	1846
BcnI	CCSGG	1 cut(s)	196
BcoDI	GTCTC	5 cut(s)	731, 927, 1072, 1655, 1718
BcuI	ACTAGT	1 cut(s)	1708
BfaI	CTAG	6 cut(s)	548, 795, 1067, 1373, 1709, 1916
BfmI	CTRYAG	1 cut(s)	292
BfrI	CTTAAG	1 cut(s)	1352
BfuI	GTATCC	1 cut(s)	1846
BisI	GCNGC	5 cut(s)	141, 219, 564, 582, 1542
BlsI	GCNGC	5 cut(s)	142, 220, 565, 583, 1543
BmcAI	AGTACT	1 cut(s)	1382
Bme1390I	CCNGG	2 cut(s)	196, 1420
BmiI	GGNNCC	4 cut(s)	307, 849, 885, 989
BmrFI	CCNGG	2 cut(s)	196, 1420
BmsI	GCATC	2 cut(s)	343, 1576
BmtI	GCTAGC	1 cut(s)	1919
BpiI	GAAGAC	1 cut(s)	659
BpuEI	CTTGAG	2 cut(s)	1186, 1895
BpuMI	CCSGG	1 cut(s)	196
BsaBI	GATNNNNATC	1 cut(s)	807
BsaHI	GRCGYC	1 cut(s)	1110
Bsc4I	CCNNNNNNNGG	1 cut(s)	1249
Bse118I	RCCGGY	2 cut(s)	255, 308
Bse1I	ACTGG	2 cut(s)	851, 1669
Bse3DI	GCAATG	2 cut(s)	569, 1118
Bse8I	GATNNNNATC	1 cut(s)	807
BseBI	CCWGG	1 cut(s)	1420
BseGI	GGATG	3 cut(s)	454, 1567, 1678
BseJI	GATNNNNATC	1 cut(s)	807
BseLI	CCNNNNNNNGG	1 cut(s)	1249
BseMI	GCAATG	2 cut(s)	569, 1118
BseMII	CTCAG	4 cut(s)	170, 447, 1001, 1293
BseNI	ACTGG	2 cut(s)	851, 1669
BseRI	GAGGAG	2 cut(s)	27, 1391
BseSI	GKGCMC	1 cut(s)	1738
BseXI	GCAGC	4 cut(s)	127, 205, 593, 1528
BseYI	CCCAGC	1 cut(s)	1237
BsgI	GTGCAG	2 cut(s)	1069, 1527
Bsh1236I	CGCG	1 cut(s)	1743
BshFI	GGCC	1 cut(s)	930
BsiHKAI	GWGCWC	2 cut(s)	547, 1179
BsiSI	CCGG	3 cut(s)	196, 256, 309
BsiWI	CGTACG	1 cut(s)	818
BslFI	GGGAC	2 cut(s)	1295, 1451
BslI	CCNNNNNNNGG	1 cut(s)	1249
BsmAI	GTCTC	5 cut(s)	731, 927, 1072, 1655, 1718
BsmFI	GGGAC	2 cut(s)	1295, 1451
BsnI	GGCC	1 cut(s)	930
Bsp1286I	GDGCHC	3 cut(s)	547, 1179, 1738
Bsp143I	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
BspACI	CCGC	4 cut(s)	388, 564, 1244, 1670
BspANI	GGCC	1 cut(s)	930
BspCNI	CTCAG	4 cut(s)	169, 446, 1002, 1294
BspFNI	CGCG	1 cut(s)	1743
BspLI	GGNNCC	4 cut(s)	307, 849, 885, 989
BspMAI	CTGCAG	1 cut(s)	296
BspOI	GCTAGC	1 cut(s)	1919
BspPI	GGATC	5 cut(s)	416, 878, 891, 1283, 1467
BspTI	CTTAAG	1 cut(s)	1352
BsrDI	GCAATG	2 cut(s)	569, 1118
BsrFI	RCCGGY	2 cut(s)	255, 308
BsrI	ACTGG	2 cut(s)	851, 1669
BssAI	RCCGGY	2 cut(s)	255, 308
BssMI	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
BssNI	GRCGYC	1 cut(s)	1110
BssSI	CACGAG	1 cut(s)	924
Bst2BI	CACGAG	1 cut(s)	924
Bst2UI	CCWGG	1 cut(s)	1420
Bst4CI	ACNGT	3 cut(s)	55, 702, 763
Bst6I	CTCTTC	2 cut(s)	533, 1506
BstACI	GRCGYC	1 cut(s)	1110
BstAFI	CTTAAG	1 cut(s)	1352
BstAPI	GCANNNNNTGC	1 cut(s)	1727
BstC8I	GCNNGC	4 cut(s)	28, 388, 915, 1917
BstDEI	CTNAG	4 cut(s)	156, 433, 1010, 1302
BstF5I	GGATG	3 cut(s)	454, 1567, 1678
BstFNI	CGCG	1 cut(s)	1743
BstHHI	GCGC	2 cut(s)	1480, 1743
BstKTI	GATC	8 cut(s)	66, 424, 886, 968, 1009, 1291, 1369, 1462
BstMAI	GTCTC	5 cut(s)	731, 927, 1072, 1655, 1718
BstMBI	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
BstMWI	GCNNNNNNNGC	4 cut(s)	140, 291, 314, 1727
BstNI	CCWGG	1 cut(s)	1420
BstNSI	RCATGY	4 cut(s)	190, 604, 629, 1763
BstSCI	CCNGG	2 cut(s)	194, 1418
BstSFI	CTRYAG	1 cut(s)	292
BstSLI	GKGCMC	1 cut(s)	1738
BstUI	CGCG	1 cut(s)	1743
BstV1I	GCAGC	4 cut(s)	127, 205, 593, 1528
BstV2I	GAAGAC	1 cut(s)	659
BstX2I	RGATCY	2 cut(s)	883, 1288
BstXI	CCANNNNNNTGG	1 cut(s)	449
BstYI	RGATCY	2 cut(s)	883, 1288
BsuI	GTATCC	1 cut(s)	1846
BsuRI	GGCC	1 cut(s)	930
BtsCI	GGATG	3 cut(s)	454, 1567, 1678
BtsI	GCAGTG	2 cut(s)	528, 1081
BtsIMutI	CAGTG	6 cut(s)	528, 711, 858, 1081, 1268, 1299
Cac8I	GCNNGC	4 cut(s)	28, 388, 915, 1917
CaiI	CAGNNNCTG	1 cut(s)	1727
CfoI	GCGC	2 cut(s)	1480, 1743
Cfr10I	RCCGGY	2 cut(s)	255, 308
Csp6I	GTAC	2 cut(s)	819, 1381
CviQI	GTAC	2 cut(s)	819, 1381
DdeI	CTNAG	4 cut(s)	156, 433, 1010, 1302
DpnI	GATC	8 cut(s)	65, 423, 885, 967, 1008, 1290, 1368, 1461
DpnII	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
EaeI	YGGCCR	1 cut(s)	928
Eam1104I	CTCTTC	2 cut(s)	533, 1506
EarI	CTCTTC	2 cut(s)	533, 1506
Ecl136II	GAGCTC	2 cut(s)	545, 1177
Eco24I	GRGCYC	2 cut(s)	547, 1179
Eco53kI	GAGCTC	2 cut(s)	545, 1177
Eco57I	CTGAAG	2 cut(s)	1109, 1268
EcoICRI	GAGCTC	2 cut(s)	545, 1177
EcoRI	GAATTC	1 cut(s)	1339
EcoRII	CCWGG	1 cut(s)	1418
EcoT22I	ATGCAT	1 cut(s)	1569
EcoT38I	GRGCYC	2 cut(s)	547, 1179
FalI	AAGNNNNNCTT	2 cut(s)	1639, 1671
FaqI	GGGAC	2 cut(s)	1295, 1451
FauI	CCCGC	2 cut(s)	395, 1251
Fnu4HI	GCNGC	5 cut(s)	141, 219, 564, 582, 1542
FokI	GGATG	3 cut(s)	461, 1554, 1685
FriOI	GRGCYC	2 cut(s)	547, 1179
Fsp4HI	GCNGC	5 cut(s)	141, 219, 564, 582, 1542
FspBI	CTAG	6 cut(s)	548, 795, 1067, 1373, 1709, 1916
GlaI	GCGC	2 cut(s)	1479, 1742
GluI	GCNGC	5 cut(s)	141, 219, 564, 582, 1542
GsaI	CCCAGC	1 cut(s)	1241
HaeIII	GGCC	1 cut(s)	930
HapII	CCGG	3 cut(s)	196, 256, 309
HhaI	GCGC	2 cut(s)	1480, 1743
Hin1I	GRCGYC	1 cut(s)	1110
Hin6I	GCGC	2 cut(s)	1478, 1741
HinP1I	GCGC	2 cut(s)	1478, 1741
HincII	GTYRAC	1 cut(s)	1881
HindII	GTYRAC	1 cut(s)	1881
HindIII	AAGCTT	1 cut(s)	408
HpaI	GTTAAC	1 cut(s)	1881
HpaII	CCGG	3 cut(s)	196, 256, 309
HphI	GGTGA	5 cut(s)	58, 67, 635, 673, 1607
Hpy166II	GTNNAC	3 cut(s)	370, 643, 1881
Hpy188I	TCNGA	8 cut(s)	159, 396, 469, 672, 869, 883, 1011, 1345
Hpy8I	GTNNAC	3 cut(s)	370, 643, 1881
Hpy99I	CGWCG	1 cut(s)	64
HpyAV	CCTTC	7 cut(s)	124, 601, 783, 888, 978, 1243, 1637
HpyCH4III	ACNGT	3 cut(s)	55, 702, 763
HpyCH4IV	ACGT	2 cut(s)	35, 1110
HpyF10VI	GCNNNNNNNGC	4 cut(s)	140, 291, 314, 1727
HpyF3I	CTNAG	4 cut(s)	156, 433, 1010, 1302
HpySE526I	ACGT	2 cut(s)	35, 1110
Hsp92I	GRCGYC	1 cut(s)	1110
HspAI	GCGC	2 cut(s)	1478, 1741
KspAI	GTTAAC	1 cut(s)	1881
Kzo9I	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
LmnI	GCTCC	4 cut(s)	305, 734, 754, 1024
Lsp1109I	GCAGC	4 cut(s)	127, 205, 593, 1528
LweI	GCATC	2 cut(s)	343, 1576
MaeI	CTAG	6 cut(s)	548, 795, 1067, 1373, 1709, 1916
MaeII	ACGT	2 cut(s)	35, 1110
MaeIII	GTNAC	6 cut(s)	49, 55, 86, 1232, 1578, 1838
MalI	GATC	8 cut(s)	65, 423, 885, 967, 1008, 1290, 1368, 1461
MboI	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
MboII	GAAGA	8 cut(s)	493, 496, 550, 659, 706, 768, 1520, 1523
MfeI	CAATTG	2 cut(s)	606, 1048
MflI	RGATCY	2 cut(s)	883, 1288
MhlI	GDGCHC	3 cut(s)	547, 1179, 1738
MlsI	TGGCCA	1 cut(s)	930
MluNI	TGGCCA	1 cut(s)	930
MlyI	GAGTC	2 cut(s)	673, 929
MmeI	TCCRAC	1 cut(s)	1387
MnlI	CCTC	8 cut(s)	5, 652, 1151, 1270, 1369, 1581, 1681, 1773
Mox20I	TGGCCA	1 cut(s)	930
Mph1103I	ATGCAT	1 cut(s)	1569
MroXI	GAANNNNTTC	3 cut(s)	176, 874, 1628
MscI	TGGCCA	1 cut(s)	930
MseI	TTAA	7 cut(s)	251, 1215, 1229, 1353, 1791, 1859, 1880
MslI	CAYNNNNRTG	5 cut(s)	276, 599, 630, 1097, 1215
Msp20I	TGGCCA	1 cut(s)	930
MspA1I	CMGCKG	2 cut(s)	1246, 1541
MspCI	CTTAAG	1 cut(s)	1352
MspI	CCGG	3 cut(s)	196, 256, 309
MspR9I	CCNGG	2 cut(s)	196, 1420
MunI	CAATTG	2 cut(s)	606, 1048
MvaI	CCWGG	1 cut(s)	1420
MvnI	CGCG	1 cut(s)	1743
MwoI	GCNNNNNNNGC	4 cut(s)	140, 291, 314, 1727
NciI	CCSGG	1 cut(s)	196
NdeII	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
NheI	GCTAGC	1 cut(s)	1915
NlaIV	GGNNCC	4 cut(s)	307, 849, 885, 989
NmuCI	GTSAC	2 cut(s)	49, 55
NsiI	ATGCAT	1 cut(s)	1569
NspI	RCATGY	4 cut(s)	190, 604, 629, 1763
OliI	CACNNNNGTG	1 cut(s)	276
PciI	ACATGT	3 cut(s)	186, 600, 625
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PdmI	GAANNNNTTC	3 cut(s)	176, 874, 1628
PfeI	GAWTC	8 cut(s)	205, 358, 673, 713, 803, 875, 1295, 1870
Pfl23II	CGTACG	1 cut(s)	818
PkrI	GCNGC	5 cut(s)	142, 220, 565, 583, 1543
PleI	GAGTC	2 cut(s)	672, 928
PpsI	GAGTC	2 cut(s)	672, 928
PscI	ACATGT	3 cut(s)	186, 600, 625
PsiI	TTATAA	2 cut(s)	102, 506
Psp124BI	GAGCTC	2 cut(s)	547, 1179
Psp6I	CCWGG	1 cut(s)	1418
PspFI	CCCAGC	1 cut(s)	1237
PspGI	CCWGG	1 cut(s)	1418
PspLI	CGTACG	1 cut(s)	818
PspN4I	GGNNCC	4 cut(s)	307, 849, 885, 989
PstI	CTGCAG	1 cut(s)	296
PstNI	CAGNNNCTG	1 cut(s)	1727
PsuI	RGATCY	2 cut(s)	883, 1288
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	2 cut(s)	820, 1382
RsaNI	GTAC	2 cut(s)	819, 1381
RseI	CAYNNNNRTG	5 cut(s)	276, 599, 630, 1097, 1215
SacI	GAGCTC	2 cut(s)	547, 1179
SaqAI	TTAA	7 cut(s)	251, 1215, 1229, 1353, 1791, 1859, 1880
SatI	GCNGC	5 cut(s)	141, 219, 564, 582, 1542
Sau3AI	GATC	8 cut(s)	63, 421, 883, 965, 1006, 1288, 1366, 1459
ScaI	AGTACT	1 cut(s)	1382
SchI	GAGTC	2 cut(s)	673, 929
ScrFI	CCNGG	2 cut(s)	196, 1420
SduI	GDGCHC	3 cut(s)	547, 1179, 1738
SfaNI	GCATC	2 cut(s)	343, 1576
SfcI	CTRYAG	1 cut(s)	292
SmiMI	CAYNNNNRTG	5 cut(s)	276, 599, 630, 1097, 1215
SmlI	CTYRAG	3 cut(s)	1165, 1352, 1874
SmoI	CTYRAG	3 cut(s)	1165, 1352, 1874
SpeI	ACTAGT	1 cut(s)	1708
SsiI	CCGC	4 cut(s)	388, 564, 1244, 1670
SspMI	CTAG	6 cut(s)	548, 795, 1067, 1373, 1709, 1916
SstI	GAGCTC	2 cut(s)	547, 1179
StyD4I	CCNGG	2 cut(s)	194, 1418
TaaI	ACNGT	3 cut(s)	55, 702, 763
TaiI	ACGT	2 cut(s)	38, 1113
TaqI	TCGA	4 cut(s)	10, 1201, 1698, 1831
TatI	WGTACW	1 cut(s)	1380
TauI	GCSGC	1 cut(s)	566
TfiI	GAWTC	8 cut(s)	205, 358, 673, 713, 803, 875, 1295, 1870
Tru1I	TTAA	7 cut(s)	251, 1215, 1229, 1353, 1791, 1859, 1880
Tru9I	TTAA	7 cut(s)	251, 1215, 1229, 1353, 1791, 1859, 1880
TscAI	CASTG	6 cut(s)	535, 711, 858, 1088, 1275, 1306
TseFI	GTSAC	2 cut(s)	49, 55
TseI	GCWGC	4 cut(s)	140, 218, 581, 1541
Tsp45I	GTSAC	2 cut(s)	49, 55
TspDTI	ATGAA	9 cut(s)	257, 413, 583, 867, 1326, 1335, 1352, 1656, 1719
TspGWI	ACGGA	2 cut(s)	414, 1700
TspRI	CASTG	6 cut(s)	535, 711, 858, 1088, 1275, 1306
Vha464I	CTTAAG	1 cut(s)	1352
XapI	RAATTY	4 cut(s)	1339, 1411, 1472, 1801
XbaI	TCTAGA	1 cut(s)	547
XceI	RCATGY	4 cut(s)	190, 604, 629, 1763
XmnI	GAANNNNTTC	3 cut(s)	176, 874, 1628
XspI	CTAG	6 cut(s)	548, 795, 1067, 1373, 1709, 1916
ZraI	GACGTC	1 cut(s)	1111
ZrmI	AGTACT	1 cut(s)	1382
Zsp2I	ATGCAT	1 cut(s)	1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.