FvH4_6g08080

Golgi vesicle prefusion complex stabilization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0006937
Physical Location & Seq
Forward (+)
4802696 .. 4805993
3298 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g08080.t1

Sequence Viewer

Length: 1587 bp
ATGGCAAAAACGAGCTCCGGACCACCAAACATCAAGGCTATGATCAAAATTAACAGGCCTCATGGAGGAGACCCAAATGATTTTCCAGAAGATTTCAAAAATGTGAATAACAGCAATAAAAGGTTTAACAAGAGTTTGTACAATACAACTTATACTTTAGTATCAGAGGGCTACATCGACTCTGCTATGGAGCTGATTGATAAGGCCATAGAAGAGGGCGATGCATTAAAGGTGGTGGCCATGACCAGCATGCTCGAAGAGTACACTGAGGCTGGCAAGGCCATGGAGGCTCTGGATTTTGTTCTCATCAAGGCACTGGCTGCAGACCTGGACCCCAATTTTCTCGGGGTTAACAGGGAATGTGTCATGGAGATAATGGGGCAGACACTGCAGCCCAATGCGGGCACATACACGGTTGTGTTTGATGAATATGCAAGGCACAACAAGATGGAGGAGGCCAAGCAATTTCTAAAGGAGATGAAAGCTAAAGGGTTTGTGTTTGACAGGAAGGCAATGAGGGCCATCAGGCAGGTTCTCAAGGACAAAGAACATATATGCTCACAAGCATCATGCACGTTCTCTATGGTACGTGACCTAGAAGAGTACTCAGACGACTCAGATGGTTATGATGAAATTAAGGAGGTCAGCAAACAAACCAAACAAGTCATCAAGGGCGACCAAGAAAACCCCATACATTTGCAACGAGTCTTCAACATAATCTACAAGGATAAACAGATACGTGACAAATTTCTTCTTGAAATTGCTTCACTCTTAAGTCCCTCGACCGGTGGCCACGCCCAAGTTGTTAAAATTCCAAGAAACAATATTTGCATTATAGGTACTCCTTTCCCAGTGTTGCAAGCAATTCACTATGCTTATGATCGTTTAAGGCTCATCCTCTCACGTGGCTTCTTTATGGTGGCTAAAAGTTTTACTTATAGCTCTCACACTTATGAGCAACTAAAGAAAGCTTTGGCAGATCGTTTGCATTATTTAGAGATGCATCTCATTTCAAGGGAAAGAGAAGAGACTTTGACATTCATTTTGAGGTTTACTGATGCAGAAACTACATACCCGAGGTTCACCATCTTCGACGTCTCACCTAAAATTGGCGTTAGAGTGAGAGATCGTGGTGACCTGGAAGAGTATTCAGACGACTCAGATGATGATGATGATGTAATTAAGGAGAGGGGAACTATTCCCAGTAACGGCTACGTACGGGGTGATAAATATGAAAAGTTCTATATTATTAACGGTAGAGTCTTGACGGTTAAATCACGAAATTCACGACTTACTGGAAATATGCTAGACACCGCTAAAAAAGTGGTCGAGATAGCTTTGGGCCAGGATGCAGTTGAATCCATTCACCTTGCAGCCTGTACTGCTATGGCTTTGATCGACAATTGGGAGATGAATCATCTCGGGAAAGAGTGTGCAATAGGGACCTTAATTGCCGGTTGGCATGGAAATGAGGCCATAATGTATCTTGTTTATTCTTCCAAGCGTGAAGCTGGAGGTGGTATCAGGTTTCTAAGGGTCCCTGTAATTGTGTTGGCATCAGAGGGACCATTGGCAGAGCTACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

529

Amino Acids

59.7

Weight (kDa)

5.84

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 132 - 168 2.4e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1098
Acc36I ACCTGC 1 cut(s) 520
AccIII TCCGGA 1 cut(s) 17
AciI CCGC 2 cut(s) 401, 1314
AcoI YGGCCR 2 cut(s) 237, 790
AcsI RAATTY 3 cut(s) 746, 810, 1282
AcvI CACGTG 1 cut(s) 905
AcyI GRCGYC 1 cut(s) 1095
AfaI GTAC 7 cut(s) 140, 263, 588, 605, 841, 1218, 1381
AfiI CCNNNNNNNGG 5 cut(s) 65, 401, 785, 1109, 1208
AflII CTTAAG 1 cut(s) 772
AgeI ACCGGT 1 cut(s) 785
AgsI TTSAA 5 cut(s) 97, 712, 758, 1014, 1358
AjnI CCWGG 3 cut(s) 327, 1137, 1344
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 8 cut(s) 15, 193, 485, 942, 971, 1337, 1511, 1579
AluI AGCT 8 cut(s) 15, 193, 485, 942, 971, 1337, 1511, 1579
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 3 cut(s) 63, 1022, 1102
AlwNI CAGNNNCTG 1 cut(s) 388
Ama87I CYCGRG 3 cut(s) 344, 1075, 1421
Aor13HI TCCGGA 1 cut(s) 17
AoxI GGCC 9 cut(s) 56, 204, 237, 279, 456, 519, 790, 1342, 1473
ApeKI GCWGC 3 cut(s) 320, 391, 1373
ApoI RAATTY 3 cut(s) 746, 810, 1282
ArsI GACNNNNNNTTYG 2 cut(s) 1027, 1059
AsiGI ACCGGT 1 cut(s) 785
Asp700I GAANNNNTTC 1 cut(s) 1362
AspS9I GGNCC 7 cut(s) 20, 331, 519, 1342, 1443, 1537, 1565
AsuHPI GGTGA 5 cut(s) 1075, 1092, 1145, 1235, 1358
AvaI CYCGRG 3 cut(s) 344, 1075, 1421
AvaII GGWCC 5 cut(s) 20, 331, 1443, 1537, 1565
BaeGI GKGCMC 1 cut(s) 407
BaeI ACNNNNGTAYC 2 cut(s) 144, 177
BalI TGGCCA 2 cut(s) 239, 792
BanII GRGCYC 1 cut(s) 17
BbrPI CACGTG 1 cut(s) 905
BbsI GAAGAC 1 cut(s) 700
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 3 cut(s) 307, 403, 1385
BccI CCATC 4 cut(s) 442, 530, 614, 1094
BceAI ACGGC 1 cut(s) 1225
BciT130I CCWGG 3 cut(s) 329, 1139, 1346
BclI TGATCA 1 cut(s) 42
BcoDI GTCTC 3 cut(s) 63, 1022, 1102
BfaI CTAG 2 cut(s) 596, 1307
BfmI CTRYAG 2 cut(s) 321, 389
BfrI CTTAAG 1 cut(s) 772
BfuAI ACCTGC 1 cut(s) 520
BglI GCCNNNNNGGC 1 cut(s) 287
BisI GCNGC 3 cut(s) 321, 392, 1374
BlsI GCNGC 3 cut(s) 322, 393, 1375
BmcAI AGTACT 1 cut(s) 605
Bme1390I CCNGG 3 cut(s) 329, 1139, 1346
Bme18I GGWCC 5 cut(s) 20, 331, 1443, 1537, 1565
BmeT110I CYCGRG 3 cut(s) 344, 1075, 1421
BmgT120I GGNCC 7 cut(s) 20, 331, 519, 1342, 1443, 1537, 1565
BmiI GGNNCC 5 cut(s) 333, 1444, 1538, 1539, 1566
BmrFI CCNGG 3 cut(s) 329, 1139, 1346
BmrI ACTGGG 2 cut(s) 845, 1197
BmsI GCATC 7 cut(s) 211, 575, 990, 1012, 1048, 1339, 1565
BmuI ACTGGG 2 cut(s) 845, 1197
BpiI GAAGAC 1 cut(s) 700
BpmI CTGGAG 1 cut(s) 1533
BpuEI CTTGAG 1 cut(s) 521
BsaAI YACGTR 4 cut(s) 590, 740, 905, 1216
BsaHI GRCGYC 1 cut(s) 1095
BsaI GGTCTC 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 282, 1076
BsaWI WCCGGW 2 cut(s) 17, 785
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 401, 785, 1109, 1208
Bse118I RCCGGY 2 cut(s) 785, 1454
Bse1I ACTGG 4 cut(s) 321, 851, 1203, 1300
Bse3DI GCAATG 1 cut(s) 519
BseAI TCCGGA 1 cut(s) 17
BseBI CCWGG 3 cut(s) 329, 1139, 1346
BseDI CCNNGG 2 cut(s) 282, 1076
BseGI GGATG 2 cut(s) 894, 1354
BseLI CCNNNNNNNGG 5 cut(s) 65, 401, 785, 1109, 1208
BseMI GCAATG 1 cut(s) 519
BseMII CTCAG 4 cut(s) 258, 621, 630, 1173
BseNI ACTGG 4 cut(s) 321, 851, 1203, 1300
BseRI GAGGAG 2 cut(s) 81, 467
BseSI GKGCMC 1 cut(s) 407
BseXI GCAGC 3 cut(s) 307, 403, 1385
Bsh1285I CGRYCG 1 cut(s) 786
BshFI GGCC 9 cut(s) 58, 206, 239, 281, 458, 521, 792, 1344, 1475
BshTI ACCGGT 1 cut(s) 785
BsiEI CGRYCG 1 cut(s) 786
BsiHKAI GWGCWC 1 cut(s) 17
BsiHKCI CYCGRG 3 cut(s) 344, 1075, 1421
BsiSI CCGG 3 cut(s) 18, 786, 1455
BsiWI CGTACG 1 cut(s) 1216
BslFI GGGAC 4 cut(s) 762, 1456, 1523, 1578
BslI CCNNNNNNNGG 5 cut(s) 65, 401, 785, 1109, 1208
BsmAI GTCTC 3 cut(s) 63, 1022, 1102
BsmBI CGTCTC 1 cut(s) 1102
BsmFI GGGAC 4 cut(s) 762, 1456, 1523, 1578
BsnI GGCC 9 cut(s) 58, 206, 239, 281, 458, 521, 792, 1344, 1475
Bso31I GGTCTC 1 cut(s) 63
BsoBI CYCGRG 3 cut(s) 344, 1075, 1421
Bsp1286I GDGCHC 2 cut(s) 17, 407
Bsp13I TCCGGA 1 cut(s) 17
Bsp1407I TGTACA 1 cut(s) 138
Bsp143I GATC 5 cut(s) 42, 880, 979, 1126, 1395
Bsp19I CCATGG 1 cut(s) 282
BspACI CCGC 2 cut(s) 401, 1314
BspANI GGCC 9 cut(s) 58, 206, 239, 281, 458, 521, 792, 1344, 1475
BspCNI CTCAG 4 cut(s) 259, 620, 629, 1172
BspEI TCCGGA 1 cut(s) 17
BspLI GGNNCC 5 cut(s) 333, 1444, 1538, 1539, 1566
BspMAI CTGCAG 2 cut(s) 325, 393
BspMI ACCTGC 1 cut(s) 520
BspTI CTTAAG 1 cut(s) 772
BspTNI GGTCTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 519
BsrFI RCCGGY 2 cut(s) 785, 1454
BsrGI TGTACA 1 cut(s) 138
BsrI ACTGG 4 cut(s) 321, 851, 1203, 1300
BssAI RCCGGY 2 cut(s) 785, 1454
BssECI CCNNGG 2 cut(s) 282, 1076
BssMI GATC 5 cut(s) 42, 880, 979, 1126, 1395
BssNI GRCGYC 1 cut(s) 1095
BssT1I CCWWGG 1 cut(s) 282
Bst2UI CCWGG 3 cut(s) 329, 1139, 1346
Bst4CI ACNGT 3 cut(s) 415, 1256, 1270
Bst6I CTCTTC 5 cut(s) 207, 252, 594, 1020, 1137
BstACI GRCGYC 1 cut(s) 1095
BstAFI CTTAAG 1 cut(s) 772
BstAPI GCANNNNNTGC 2 cut(s) 320, 388
BstAUI TGTACA 1 cut(s) 138
BstBAI YACGTR 4 cut(s) 590, 740, 905, 1216
BstC8I GCNNGC 4 cut(s) 251, 274, 403, 861
BstDEI CTNAG 5 cut(s) 267, 607, 616, 1159, 1532
BstDSI CCRYGG 1 cut(s) 282
BstEII GGTNACC 1 cut(s) 1133
BstENI CCTNNNNNAGG 1 cut(s) 63
BstF5I GGATG 2 cut(s) 894, 1354
BstKTI GATC 5 cut(s) 45, 883, 982, 1129, 1398
BstMAI GTCTC 3 cut(s) 63, 1022, 1102
BstMBI GATC 5 cut(s) 42, 880, 979, 1126, 1395
BstMCI CGRYCG 1 cut(s) 786
BstMWI GCNNNNNNNGC 6 cut(s) 278, 287, 320, 388, 518, 1382
BstNI CCWGG 3 cut(s) 329, 1139, 1346
BstNSI RCATGY 1 cut(s) 253
BstPI GGTNACC 1 cut(s) 1133
BstSCI CCNGG 3 cut(s) 327, 1137, 1344
BstSFI CTRYAG 2 cut(s) 321, 389
BstSLI GKGCMC 1 cut(s) 407
BstSNI TACGTA 1 cut(s) 1216
BstV1I GCAGC 3 cut(s) 307, 403, 1385
BstV2I GAAGAC 1 cut(s) 700
BsuRI GGCC 9 cut(s) 58, 206, 239, 281, 458, 521, 792, 1344, 1475
BtgI CCRYGG 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 2 cut(s) 894, 1354
BtsI GCAGTG 1 cut(s) 386
BtsIMutI CAGTG 4 cut(s) 264, 314, 386, 858
BveI ACCTGC 1 cut(s) 520
Cac8I GCNNGC 4 cut(s) 251, 274, 403, 861
CaiI CAGNNNCTG 1 cut(s) 388
Cfr10I RCCGGY 2 cut(s) 785, 1454
Cfr13I GGNCC 7 cut(s) 20, 331, 519, 1342, 1443, 1537, 1565
Csp6I GTAC 7 cut(s) 139, 262, 587, 604, 840, 1217, 1380
CspAI ACCGGT 1 cut(s) 785
CviAII CATG 7 cut(s) 62, 241, 250, 283, 367, 570, 1463
CviQI GTAC 7 cut(s) 139, 262, 587, 604, 840, 1217, 1380
DdeI CTNAG 5 cut(s) 267, 607, 616, 1159, 1532
DpnI GATC 5 cut(s) 44, 882, 981, 1128, 1397
DpnII GATC 5 cut(s) 42, 880, 979, 1126, 1395
EaeI YGGCCR 2 cut(s) 237, 790
Eam1104I CTCTTC 5 cut(s) 207, 252, 594, 1020, 1137
EarI CTCTTC 5 cut(s) 207, 252, 594, 1020, 1137
Ecl136II GAGCTC 1 cut(s) 15
Eco105I TACGTA 1 cut(s) 1216
Eco130I CCWWGG 1 cut(s) 282
Eco147I AGGCCT 1 cut(s) 58
Eco24I GRGCYC 1 cut(s) 17
Eco31I GGTCTC 1 cut(s) 63
Eco47I GGWCC 5 cut(s) 20, 331, 1443, 1537, 1565
Eco53kI GAGCTC 1 cut(s) 15
Eco72I CACGTG 1 cut(s) 905
Eco88I CYCGRG 3 cut(s) 344, 1075, 1421
Eco91I GGTNACC 1 cut(s) 1133
EcoICRI GAGCTC 1 cut(s) 15
EcoNI CCTNNNNNAGG 1 cut(s) 63
EcoO109I RGGNCCY 2 cut(s) 1443, 1537
EcoO65I GGTNACC 1 cut(s) 1133
EcoRII CCWGG 3 cut(s) 327, 1137, 1344
EcoT14I CCWWGG 1 cut(s) 282
EcoT22I ATGCAT 2 cut(s) 226, 1005
EcoT38I GRGCYC 1 cut(s) 17
ErhI CCWWGG 1 cut(s) 282
Esp3I CGTCTC 1 cut(s) 1102
FaeI CATG 7 cut(s) 65, 244, 253, 286, 370, 573, 1466
FalI AAGNNNNNCTT 2 cut(s) 919, 951
FaqI GGGAC 4 cut(s) 762, 1456, 1523, 1578
FatI CATG 7 cut(s) 61, 240, 249, 282, 366, 569, 1462
FauI CCCGC 1 cut(s) 394
FbaI TGATCA 1 cut(s) 42
Fnu4HI GCNGC 3 cut(s) 321, 392, 1374
FokI GGATG 2 cut(s) 881, 1361
FriOI GRGCYC 1 cut(s) 17
Fsp4HI GCNGC 3 cut(s) 321, 392, 1374
FspBI CTAG 2 cut(s) 596, 1307
GluI GCNGC 3 cut(s) 321, 392, 1374
GsuI CTGGAG 1 cut(s) 1533
HaeIII GGCC 9 cut(s) 58, 206, 239, 281, 458, 521, 792, 1344, 1475
HapII CCGG 3 cut(s) 18, 786, 1455
Hin1I GRCGYC 1 cut(s) 1095
Hin1II CATG 7 cut(s) 65, 244, 253, 286, 370, 573, 1466
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HindIII AAGCTT 1 cut(s) 969
HinfI GANTC 7 cut(s) 179, 614, 705, 1157, 1260, 1358, 1414
HpaI GTTAAC 1 cut(s) 352
HpaII CCGG 3 cut(s) 18, 786, 1455
HphI GGTGA 5 cut(s) 1075, 1092, 1145, 1235, 1358
Hpy166II GTNNAC 4 cut(s) 264, 352, 1053, 1083
Hpy188I TCNGA 6 cut(s) 166, 610, 619, 1153, 1162, 1561
Hpy188III TCNNGA 9 cut(s) 18, 86, 293, 755, 1264, 1278, 1287, 1330, 1423
Hpy8I GTNNAC 4 cut(s) 264, 352, 1053, 1083
Hpy99I CGWCG 1 cut(s) 1097
HpyAV CCTTC 1 cut(s) 502
HpyCH4III ACNGT 3 cut(s) 415, 1256, 1270
HpyCH4IV ACGT 6 cut(s) 575, 589, 739, 904, 1095, 1215
HpyF10VI GCNNNNNNNGC 6 cut(s) 278, 287, 320, 388, 518, 1382
HpyF3I CTNAG 5 cut(s) 267, 607, 616, 1159, 1532
HpySE526I ACGT 6 cut(s) 575, 589, 739, 904, 1095, 1215
Hsp92I GRCGYC 1 cut(s) 1095
Hsp92II CATG 7 cut(s) 65, 244, 253, 286, 370, 573, 1466
KflI GGGWCCC 1 cut(s) 1537
Kpn2I TCCGGA 1 cut(s) 17
Ksp22I TGATCA 1 cut(s) 42
KspAI GTTAAC 1 cut(s) 352
Kzo9I GATC 5 cut(s) 42, 880, 979, 1126, 1395
LmnI GCTCC 2 cut(s) 20, 190
Lsp1109I GCAGC 3 cut(s) 307, 403, 1385
LweI GCATC 7 cut(s) 211, 575, 990, 1012, 1048, 1339, 1565
MaeI CTAG 2 cut(s) 596, 1307
MaeII ACGT 6 cut(s) 575, 589, 739, 904, 1095, 1215
MaeIII GTNAC 4 cut(s) 590, 740, 1133, 1205
MalI GATC 5 cut(s) 44, 882, 981, 1128, 1397
MboI GATC 5 cut(s) 42, 880, 979, 1126, 1395
MfeI CAATTG 1 cut(s) 1402
MhlI GDGCHC 2 cut(s) 17, 407
MlsI TGGCCA 2 cut(s) 239, 792
MluNI TGGCCA 2 cut(s) 239, 792
MlyI GAGTC 5 cut(s) 173, 608, 714, 1151, 1269
Mox20I TGGCCA 2 cut(s) 239, 792
Mph1103I ATGCAT 2 cut(s) 226, 1005
MroI TCCGGA 1 cut(s) 17
MroXI GAANNNNTTC 1 cut(s) 1362
MscI TGGCCA 2 cut(s) 239, 792
MslI CAYNNNNRTG 3 cut(s) 416, 951, 1467
Msp20I TGGCCA 2 cut(s) 239, 792
MspCI CTTAAG 1 cut(s) 772
MspI CCGG 3 cut(s) 18, 786, 1455
MspR9I CCNGG 3 cut(s) 329, 1139, 1346
MunI CAATTG 1 cut(s) 1402
MvaI CCWGG 3 cut(s) 329, 1139, 1346
MwoI GCNNNNNNNGC 6 cut(s) 278, 287, 320, 388, 518, 1382
NcoI CCATGG 1 cut(s) 282
NdeII GATC 5 cut(s) 42, 880, 979, 1126, 1395
NlaIII CATG 7 cut(s) 65, 244, 253, 286, 370, 573, 1466
NlaIV GGNNCC 5 cut(s) 333, 1444, 1538, 1539, 1566
NmuCI GTSAC 3 cut(s) 590, 740, 1133
NsiI ATGCAT 2 cut(s) 226, 1005
NspI RCATGY 1 cut(s) 253
OliI CACNNNNGTG 1 cut(s) 416
PaeI GCATGC 1 cut(s) 253
PceI AGGCCT 1 cut(s) 58
PcsI WCGNNNNNNNCGW 1 cut(s) 1285
PdmI GAANNNNTTC 1 cut(s) 1362
PfeI GAWTC 2 cut(s) 1358, 1414
Pfl23II CGTACG 1 cut(s) 1216
PinAI ACCGGT 1 cut(s) 785
PkrI GCNGC 3 cut(s) 322, 393, 1375
PleI GAGTC 5 cut(s) 173, 608, 713, 1151, 1268
PmaCI CACGTG 1 cut(s) 905
PmlI CACGTG 1 cut(s) 905
PpsI GAGTC 5 cut(s) 173, 608, 713, 1151, 1268
Ppu21I YACGTR 4 cut(s) 590, 740, 905, 1216
PpuMI RGGWCCY 2 cut(s) 1443, 1537
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 2 cut(s) 1443, 1537
Psp6I CCWGG 3 cut(s) 327, 1137, 1344
PspCI CACGTG 1 cut(s) 905
PspEI GGTNACC 1 cut(s) 1133
PspGI CCWGG 3 cut(s) 327, 1137, 1344
PspLI CGTACG 1 cut(s) 1216
PspN4I GGNNCC 5 cut(s) 333, 1444, 1538, 1539, 1566
PspPI GGNCC 7 cut(s) 20, 331, 519, 1342, 1443, 1537, 1565
PspPPI RGGWCCY 2 cut(s) 1443, 1537
PstI CTGCAG 2 cut(s) 325, 393
PstNI CAGNNNCTG 1 cut(s) 388
RsaI GTAC 7 cut(s) 140, 263, 588, 605, 841, 1218, 1381
RsaNI GTAC 7 cut(s) 139, 262, 587, 604, 840, 1217, 1380
RseI CAYNNNNRTG 3 cut(s) 416, 951, 1467
SacI GAGCTC 1 cut(s) 17
SatI GCNGC 3 cut(s) 321, 392, 1374
Sau3AI GATC 5 cut(s) 42, 880, 979, 1126, 1395
Sau96I GGNCC 7 cut(s) 20, 331, 519, 1342, 1443, 1537, 1565
ScaI AGTACT 1 cut(s) 605
SchI GAGTC 5 cut(s) 173, 608, 714, 1151, 1269
ScrFI CCNGG 3 cut(s) 329, 1139, 1346
SduI GDGCHC 2 cut(s) 17, 407
SfaNI GCATC 7 cut(s) 211, 575, 990, 1012, 1048, 1339, 1565
SfcI CTRYAG 2 cut(s) 321, 389
SinI GGWCC 5 cut(s) 20, 331, 1443, 1537, 1565
SmiMI CAYNNNNRTG 3 cut(s) 416, 951, 1467
SmlI CTYRAG 2 cut(s) 536, 772
SmoI CTYRAG 2 cut(s) 536, 772
SnaBI TACGTA 1 cut(s) 1216
SphI GCATGC 1 cut(s) 253
SseBI AGGCCT 1 cut(s) 58
SsiI CCGC 2 cut(s) 401, 1314
SspI AATATT 1 cut(s) 826
SspMI CTAG 2 cut(s) 596, 1307
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 58
StyD4I CCNGG 3 cut(s) 327, 1137, 1344
StyI CCWWGG 1 cut(s) 282
TaaI ACNGT 3 cut(s) 415, 1256, 1270
TaiI ACGT 6 cut(s) 578, 592, 742, 907, 1098, 1218
TaqI TCGA 6 cut(s) 177, 255, 782, 1092, 1329, 1398
TatI WGTACW 4 cut(s) 138, 261, 603, 1379
TfiI GAWTC 2 cut(s) 1358, 1414
TscAI CASTG 4 cut(s) 271, 321, 393, 858
TseFI GTSAC 3 cut(s) 590, 740, 1133
TseI GCWGC 3 cut(s) 320, 391, 1373
Tsp45I GTSAC 3 cut(s) 590, 740, 1133
TspDTI ATGAA 6 cut(s) 441, 494, 645, 1030, 1248, 1427
TspRI CASTG 4 cut(s) 271, 321, 393, 858
Vha464I CTTAAG 1 cut(s) 772
VpaK11BI GGWCC 5 cut(s) 20, 331, 1443, 1537, 1565
XagI CCTNNNNNAGG 1 cut(s) 63
XapI RAATTY 3 cut(s) 746, 810, 1282
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 289
XmnI GAANNNNTTC 1 cut(s) 1362
XspI CTAG 2 cut(s) 596, 1307
ZraI GACGTC 1 cut(s) 1096
ZrmI AGTACT 1 cut(s) 605
Zsp2I ATGCAT 2 cut(s) 226, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.