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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g08080 |
| rosa_chinensis | RchiOBHm_Chr3g0457771 |
| rosa_laevigata | RLG00000009522 RLG00000025118 |
| rosa_multiflora | Rmu_sc0012092.1_g000004 Rmu_sc0012092.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00063300 Rroxscaffold_1G00063360 Rroxscaffold_1G00063370 Rroxscaffold_6G00421500 |
| rosa_samantha | Rh3AG092100 Rh3BG094600 Rh3CG086800 Rh3CG087000 Rh4AG070100 Rh4BG067900 Rh4CG075800 Rh5AG102600 Rh5BG098900 Rh5BG099300 Rh5BG099700 Rh5CG111000 Rh5DG098100 Rh5DG098200 |
| rosa_wichuraiana | Rw0G012270 Rw5G008960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 1 cut(s) | 142 |
| AluBI | AGCT | 1 cut(s) | 15 |
| AluI | AGCT | 1 cut(s) | 15 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| AoxI | GGCC | 1 cut(s) | 133 |
| AspS9I | GGNCC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 140 |
| BceAI | ACGGC | 1 cut(s) | 130 |
| BciT130I | CCWGG | 1 cut(s) | 144 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 64 |
| Bme1390I | CCNGG | 1 cut(s) | 144 |
| Bme18I | GGWCC | 1 cut(s) | 140 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 140 |
| BmrFI | CCNGG | 1 cut(s) | 144 |
| BsaI | GGTCTC | 1 cut(s) | 141 |
| BsaJI | CCNNGG | 3 cut(s) | 104, 136, 153 |
| BseBI | CCWGG | 1 cut(s) | 144 |
| BseDI | CCNNGG | 3 cut(s) | 104, 136, 153 |
| BshFI | GGCC | 1 cut(s) | 135 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 164 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsnI | GGCC | 1 cut(s) | 135 |
| Bso31I | GGTCTC | 1 cut(s) | 141 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp143I | GATC | 1 cut(s) | 42 |
| BspANI | GGCC | 1 cut(s) | 135 |
| BspTNI | GGTCTC | 1 cut(s) | 141 |
| BssECI | CCNNGG | 3 cut(s) | 104, 136, 153 |
| BssMI | GATC | 1 cut(s) | 42 |
| BssT1I | CCWWGG | 2 cut(s) | 104, 136 |
| Bst2UI | CCWGG | 1 cut(s) | 144 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstKTI | GATC | 1 cut(s) | 45 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 42 |
| BstNI | CCWGG | 1 cut(s) | 144 |
| BstSCI | CCNGG | 1 cut(s) | 142 |
| BstSFI | CTRYAG | 1 cut(s) | 64 |
| BsuRI | GGCC | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 140 |
| CviAII | CATG | 1 cut(s) | 99 |
| CviJI | RGCY | 3 cut(s) | 15, 57, 135 |
| CviKI_1 | RGCY | 3 cut(s) | 15, 57, 135 |
| DpnI | GATC | 1 cut(s) | 44 |
| DpnII | GATC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 2 cut(s) | 104, 136 |
| Eco31I | GGTCTC | 1 cut(s) | 141 |
| Eco47I | GGWCC | 1 cut(s) | 140 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 142 |
| EcoT14I | CCWWGG | 2 cut(s) | 104, 136 |
| ErhI | CCWWGG | 2 cut(s) | 104, 136 |
| FaeI | CATG | 1 cut(s) | 102 |
| FaiI | YATR | 2 cut(s) | 74, 100 |
| FatI | CATG | 1 cut(s) | 98 |
| HaeIII | GGCC | 1 cut(s) | 135 |
| HapII | CCGG | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 102 |
| HinfI | GANTC | 1 cut(s) | 205 |
| HpaII | CCGG | 1 cut(s) | 164 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy166II | GTNNAC | 1 cut(s) | 126 |
| Hpy188I | TCNGA | 2 cut(s) | 201, 210 |
| Hpy188III | TCNNGA | 1 cut(s) | 46 |
| Hpy8I | GTNNAC | 1 cut(s) | 126 |
| HpyAV | CCTTC | 1 cut(s) | 105 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| Hsp92II | CATG | 1 cut(s) | 102 |
| Kzo9I | GATC | 1 cut(s) | 42 |
| LmnI | GCTCC | 1 cut(s) | 20 |
| LpnPI | CCDG | 3 cut(s) | 129, 156, 177 |
| MalI | GATC | 1 cut(s) | 44 |
| MboI | GATC | 1 cut(s) | 42 |
| MlyI | GAGTC | 1 cut(s) | 214 |
| MmeI | TCCRAC | 1 cut(s) | 48 |
| MnlI | CCTC | 2 cut(s) | 112, 148 |
| MseI | TTAA | 1 cut(s) | 51 |
| MspI | CCGG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 144 |
| MvaI | CCWGG | 1 cut(s) | 144 |
| NdeII | GATC | 1 cut(s) | 42 |
| NlaIII | CATG | 1 cut(s) | 102 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 209 |
| PleI | GAGTC | 1 cut(s) | 213 |
| PpsI | GAGTC | 1 cut(s) | 213 |
| Psp6I | CCWGG | 1 cut(s) | 142 |
| PspGI | CCWGG | 1 cut(s) | 142 |
| PspPI | GGNCC | 1 cut(s) | 140 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| Sau3AI | GATC | 1 cut(s) | 42 |
| Sau96I | GGNCC | 1 cut(s) | 140 |
| SchI | GAGTC | 1 cut(s) | 214 |
| ScrFI | CCNGG | 1 cut(s) | 144 |
| SetI | ASST | 1 cut(s) | 17 |
| SfcI | CTRYAG | 1 cut(s) | 64 |
| SinI | GGWCC | 1 cut(s) | 140 |
| StyD4I | CCNGG | 1 cut(s) | 142 |
| StyI | CCWWGG | 2 cut(s) | 104, 136 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqI | TCGA | 1 cut(s) | 174 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TscAI | CASTG | 1 cut(s) | 68 |
| TspDTI | ATGAA | 1 cut(s) | 87 |
| TspRI | CASTG | 1 cut(s) | 68 |
| VpaK11BI | GGWCC | 1 cut(s) | 140 |