Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006937

Physical Location & Seq

Genomic Coordinates Reverse (-)

53938592 .. 53942153

Gene Structure 3562 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009522

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGTACCTATGGCGGTTAATGATGTTGTACAAGTGAGGTGCAATCTTGTTGAGGCATATGCCGTCACTCTTCCATCACTCGGTGTGCAAAAAAACATTCTTCAAATGGAGGTGCTTCCACTTGGTGCTGGAGAAGATTGTGAGACAAAGATATCATACTATTTTGGATATAGGATTCACTGGCTTCTATTGTGCGCACTTGGTCAGAAGGTAGAAAATGGCTGGAATCATTATGTCAACAGGAACCGGGAATTTGCTGGTCCATTACTTGGACGCTTGTTTAGACAGCTCCTCAGGAAGTTGTCTAAGCACGCCGGAGCTCATGTGCAGAAGGTAGATATCAGTACTGAAGTTGGTGTTCCTCAAGATATCCATCCGGAAGAATTGTGTATATATACCAACTATGGTTGTTGCAGTCATCCAAAGTTCAGTGCGGACAACAAAAGGCTTCATGGAAAGAAGAATATTAAAGCATTGCAGGGGGGTTTCACAAAATATGCTGAGAGAAGAACTGTTGAGGCCATGCAAGGGGAGGACAGAGTTGCATTGGATATTTGGAGGGGTTTAACTAAGGGAATGGAAAGATTTAAGGATAACTTGGAGTTCACAAAGCCGAAAACCAGTCAGGAAGGAGTGAACCTGGATGATGTATGTTCTGAATGTCTAAATGAAGAAGTTTTCCAGTGGCATATTGAACCAAAGGCCTCAGCAAAAGGGACTGAACAAGCTGTTAAAGGAACTACCACCCTGGCTATTATTGGACGAAACTCAATAAGGCTGACTGTAGATCGAAGAGGCAAATCCCTACGACACCCTCATATGGTGCTTAATGATAACGGCGAAAAGTTCTTTGTCATCACACCCAATATTGTTGCCACCATGGCAAGTCGGTCTGACATATGCAAGGAGGTTCTGAGAAATGCCAGGACAATAGTAACCAGTGCATTTGGTCCTGCATCTCCCGAGAGTGTTCATTTTGCAGCCTTAATAGTAATGGCTGAAATGAACAGCTGGGAGACGAGGAATCCGGGAAGGATATGTCAAGCAGTAATAATGATCGCTGGATATTGCACTAACGCAGGGCGAAGAGAGGGTATTATATATATAGTAAGATCTAACTTGGTGGAAAATGGAGGGATATGTGTCAATACCCAATTTAGACGTCCATCAGCAACTGGTTCTGGGAAAGATGTTGCACTCCAGTGTCTAAAGGACTACCCTTGGGTTAAATATGATGAATTACAAGGAGATGAAGAAGATAGAGATATGGGATTTACTGGGGAGATGGCTATTGTAGCTGCTGCCATAGAGAGCAGTAGCACGGGTGGTGGTGTCCAAACGGTTACAATGCCTAGAGTTGGCGGCCACATGATGTTCAAGGCCAATTCAGTGTTGAAGCTGCTGTACTCAGACTATATATATCTTTCTCCCCTCCTTTCGAAGTCACTTTTCTGTGTAGTGGAGCCTATGGACTATATGCCTGAGACTGAAAGCGTGCTGATCGAGATGTTGGAGGACTTCTTTCCCAACTCAAAGACACATGTGATTTCAATTCAAACAACTGTGATAAGAATTATCAATTTCCCTGATGCTGAAGCTGCGGAGAGAGCGGCAAGGGACTATCCTTTTGGGATACAGCTAACAGACCCGAACAATGAGAATCAGTTTATTGATGCACTGTTTTATAGGCCTAACTTAGAATTACTTCATAATTTCATGCCACTAGAGAAGGGCTCCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0016591 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

581

Amino Acids

64.94

Weight (kDa)

6.31

Isoelectric Point (pI)

40.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006937)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g08080
rosa_chinensis	RchiOBHm_Chr3g0457771
rosa_laevigata	RLG00000009522 RLG00000025118
rosa_multiflora	Rmu_sc0012092.1_g000004 Rmu_sc0012092.1_g000006
rosa_roxburghii	Rroxscaffold_1G00063300 Rroxscaffold_1G00063360 Rroxscaffold_1G00063370 Rroxscaffold_6G00421500
rosa_samantha	Rh3AG092100 Rh3BG094600 Rh3CG086800 Rh3CG087000 Rh4AG070100 Rh4BG067900 Rh4CG075800 Rh5AG102600 Rh5BG098900 Rh5BG099300 Rh5BG099700 Rh5CG111000 Rh5DG098100 Rh5DG098200
rosa_wichuraiana	Rw0G012270 Rw5G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1165
Acc16I	TGCGCA	1 cut(s)	196
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	269
AccBSI	CCGCTC	1 cut(s)	1610
AccIII	TCCGGA	1 cut(s)	376
AciI	CCGC	5 cut(s)	14, 434, 1362, 1601, 1610
AcoI	YGGCCR	1 cut(s)	1363
AcsI	RAATTY	1 cut(s)	251
AcuI	CTGAAG	2 cut(s)	369, 1614
AcyI	GRCGYC	1 cut(s)	1162
AdeI	CACNNNGTG	2 cut(s)	83, 125
AfaI	GTAC	4 cut(s)	6, 30, 346, 1406
AfiI	CCNNNNNNNGG	5 cut(s)	80, 269, 528, 820, 1358
AflIII	ACRYGT	1 cut(s)	1540
AgsI	TTSAA	6 cut(s)	104, 695, 1378, 1396, 1551, 1556
AjnI	CCWGG	3 cut(s)	639, 747, 923
AleI	CACNNNNGTG	1 cut(s)	1201
AluBI	AGCT	8 cut(s)	289, 320, 728, 1011, 1298, 1399, 1598, 1639
AluI	AGCT	8 cut(s)	289, 320, 728, 1011, 1298, 1399, 1598, 1639
Alw21I	GWGCWC	1 cut(s)	322
Alw26I	GTCTC	3 cut(s)	137, 1010, 1478
AlwNI	CAGNNNCTG	1 cut(s)	1175
Ama87I	CYCGRG	1 cut(s)	962
Aor13HI	TCCGGA	1 cut(s)	376
AoxI	GGCC	5 cut(s)	519, 702, 1363, 1380, 1688
ApeKI	GCWGC	5 cut(s)	980, 1298, 1301, 1399, 1598
ApoI	RAATTY	1 cut(s)	251
ArsI	GACNNNNNNTTYG	2 cut(s)	1610, 1642
Asp700I	GAANNNNTTC	1 cut(s)	1704
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	1 cut(s)	197
AspS9I	GGNCC	2 cut(s)	260, 950
AsuC2I	CCSGG	2 cut(s)	248, 1029
AsuII	TTCGAA	1 cut(s)	1439
AvaI	CYCGRG	1 cut(s)	962
AvaII	GGWCC	2 cut(s)	260, 950
AxyI	CCTNAGG	1 cut(s)	293
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	322, 1736
BarI	GAAGNNNNNNTAC	2 cut(s)	1388, 1420
Bbv12I	GWGCWC	1 cut(s)	322
BbvCI	CCTCAGC	1 cut(s)	706
BbvI	GCAGC	5 cut(s)	992, 1285, 1288, 1386, 1585
BccI	CCATC	4 cut(s)	82, 381, 1174, 1279
BceAI	ACGGC	2 cut(s)	47, 853
BciT130I	CCWGG	3 cut(s)	641, 749, 925
BciVI	GTATCC	1 cut(s)	1626
BcnI	CCSGG	2 cut(s)	248, 1029
BcoDI	GTCTC	3 cut(s)	137, 1010, 1478
BfaI	CTAG	2 cut(s)	1353, 1724
BfmI	CTRYAG	1 cut(s)	783
BfuI	GTATCC	1 cut(s)	1626
BglI	GCCNNNNNGGC	1 cut(s)	881
BglII	AGATCT	1 cut(s)	1112
BisI	GCNGC	7 cut(s)	981, 1299, 1302, 1363, 1400, 1599, 1611
BlsI	GCNGC	7 cut(s)	982, 1300, 1303, 1364, 1401, 1600, 1612
BmcAI	AGTACT	1 cut(s)	346
Bme1390I	CCNGG	5 cut(s)	248, 641, 749, 925, 1029
Bme18I	GGWCC	2 cut(s)	260, 950
BmeT110I	CYCGRG	1 cut(s)	962
BmgT120I	GGNCC	2 cut(s)	260, 950
BmiI	GGNNCC	4 cut(s)	6, 245, 1464, 1735
BmrFI	CCNGG	5 cut(s)	248, 641, 749, 925, 1029
BmrI	ACTGGG	1 cut(s)	1287
BmsI	GCATC	3 cut(s)	965, 1579, 1663
BmuI	ACTGGG	1 cut(s)	1287
BplI	GAGNNNNNCTC	1 cut(s)	1718
BpmI	CTGGAG	2 cut(s)	150, 1184
Bpu10I	CCTNAGC	1 cut(s)	706
Bpu14I	TTCGAA	1 cut(s)	1439
BpuEI	CTTGAG	1 cut(s)	348
BpuMI	CCSGG	2 cut(s)	248, 1029
BsaBI	GATNNNNATC	1 cut(s)	372
BsaHI	GRCGYC	1 cut(s)	1162
BsaJI	CCNNGG	3 cut(s)	747, 879, 1220
BsaWI	WCCGGW	1 cut(s)	376
BsaXI	ACNNNNNCTCC	2 cut(s)	309, 339
Bsc4I	CCNNNNNNNGG	5 cut(s)	80, 269, 528, 820, 1358
Bse1I	ACTGG	7 cut(s)	185, 621, 682, 939, 1180, 1201, 1282
Bse21I	CCTNAGG	1 cut(s)	293
Bse3DI	GCAATG	1 cut(s)	473
Bse8I	GATNNNNATC	1 cut(s)	372
BseAI	TCCGGA	1 cut(s)	376
BseBI	CCWGG	3 cut(s)	641, 749, 925
BseDI	CCNNGG	3 cut(s)	747, 879, 1220
BseGI	GGATG	3 cut(s)	373, 418, 649
BseJI	GATNNNNATC	1 cut(s)	372
BseLI	CCNNNNNNNGG	5 cut(s)	80, 269, 528, 820, 1358
BseMI	GCAATG	1 cut(s)	473
BseMII	CTCAG	6 cut(s)	307, 492, 720, 905, 1422, 1473
BseNI	ACTGG	7 cut(s)	185, 621, 682, 939, 1180, 1201, 1282
BseRI	GAGGAG	1 cut(s)	281
BseXI	GCAGC	5 cut(s)	992, 1285, 1288, 1386, 1585
BseYI	CCCAGC	1 cut(s)	1011
BsgI	GTGCAG	1 cut(s)	347
BshFI	GGCC	5 cut(s)	521, 704, 1365, 1382, 1690
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	322
BsiHKCI	CYCGRG	1 cut(s)	962
BsiSI	CCGG	4 cut(s)	247, 315, 377, 1028
BslFI	GGGAC	2 cut(s)	730, 1631
BslI	CCNNNNNNNGG	5 cut(s)	80, 269, 528, 820, 1358
BsmAI	GTCTC	3 cut(s)	137, 1010, 1478
BsmBI	CGTCTC	1 cut(s)	1010
BsmFI	GGGAC	2 cut(s)	730, 1631
BsnI	GGCC	5 cut(s)	521, 704, 1365, 1382, 1690
BsoBI	CYCGRG	1 cut(s)	962
Bsp119I	TTCGAA	1 cut(s)	1439
Bsp1286I	GDGCHC	2 cut(s)	322, 1736
Bsp13I	TCCGGA	1 cut(s)	376
Bsp1407I	TGTACA	1 cut(s)	28
Bsp143I	GATC	4 cut(s)	787, 1056, 1112, 1500
Bsp19I	CCATGG	1 cut(s)	879
BspACI	CCGC	5 cut(s)	14, 434, 1362, 1601, 1610
BspANI	GGCC	5 cut(s)	521, 704, 1365, 1382, 1690
BspCNI	CTCAG	6 cut(s)	306, 493, 719, 906, 1421, 1474
BspEI	TCCGGA	1 cut(s)	376
BspLI	GGNNCC	4 cut(s)	6, 245, 1464, 1735
BspT104I	TTCGAA	1 cut(s)	1439
BspT107I	GGYRCC	1 cut(s)	4
BsrBI	CCGCTC	1 cut(s)	1610
BsrDI	GCAATG	1 cut(s)	473
BsrGI	TGTACA	1 cut(s)	28
BsrI	ACTGG	7 cut(s)	185, 621, 682, 939, 1180, 1201, 1282
BssECI	CCNNGG	3 cut(s)	747, 879, 1220
BssMI	GATC	4 cut(s)	787, 1056, 1112, 1500
BssNI	GRCGYC	1 cut(s)	1162
BssT1I	CCWWGG	2 cut(s)	879, 1220
Bst2UI	CCWGG	3 cut(s)	641, 749, 925
Bst4CI	ACNGT	5 cut(s)	514, 784, 1342, 1564, 1680
Bst6I	CTCTTC	3 cut(s)	75, 787, 1081
BstACI	GRCGYC	1 cut(s)	1162
BstAUI	TGTACA	1 cut(s)	28
BstBI	TTCGAA	1 cut(s)	1439
BstC8I	GCNNGC	2 cut(s)	312, 1496
BstDEI	CTNAG	9 cut(s)	293, 306, 501, 570, 706, 914, 1408, 1482, 1696
BstDSI	CCRYGG	1 cut(s)	879
BstF5I	GGATG	3 cut(s)	373, 418, 649
BstHHI	GCGC	1 cut(s)	197
BstKTI	GATC	4 cut(s)	790, 1059, 1115, 1503
BstMAI	GTCTC	3 cut(s)	137, 1010, 1478
BstMBI	GATC	4 cut(s)	787, 1056, 1112, 1500
BstMWI	GCNNNNNNNGC	4 cut(s)	881, 1295, 1598, 1607
BstNI	CCWGG	3 cut(s)	641, 749, 925
BstNSI	RCATGY	1 cut(s)	1544
BstSCI	CCNGG	5 cut(s)	246, 639, 747, 923, 1027
BstSFI	CTRYAG	1 cut(s)	783
BstV1I	GCAGC	5 cut(s)	992, 1285, 1288, 1386, 1585
BstX2I	RGATCY	1 cut(s)	1112
BstYI	RGATCY	1 cut(s)	1112
Bsu36I	CCTNAGG	1 cut(s)	293
BsuI	GTATCC	1 cut(s)	1626
BsuRI	GGCC	5 cut(s)	521, 704, 1365, 1382, 1690
BtgI	CCRYGG	1 cut(s)	879
BtsCI	GGATG	3 cut(s)	373, 418, 649
BtsIMutI	CAGTG	7 cut(s)	178, 436, 689, 946, 1208, 1395, 1676
Cac8I	GCNNGC	2 cut(s)	312, 1496
CaiI	CAGNNNCTG	1 cut(s)	1175
CfoI	GCGC	1 cut(s)	197
Cfr13I	GGNCC	2 cut(s)	260, 950
CseI	GACGC	1 cut(s)	282
Csp6I	GTAC	4 cut(s)	5, 29, 345, 1405
CviAII	CATG	7 cut(s)	323, 452, 523, 880, 1369, 1541, 1717
CviQI	GTAC	4 cut(s)	5, 29, 345, 1405
DdeI	CTNAG	9 cut(s)	293, 306, 501, 570, 706, 914, 1408, 1482, 1696
DpnI	GATC	4 cut(s)	789, 1058, 1114, 1502
DpnII	GATC	4 cut(s)	787, 1056, 1112, 1500
DraIII	CACNNNGTG	2 cut(s)	83, 125
EaeI	YGGCCR	1 cut(s)	1363
Eam1104I	CTCTTC	3 cut(s)	75, 787, 1081
EarI	CTCTTC	3 cut(s)	75, 787, 1081
Ecl136II	GAGCTC	1 cut(s)	320
Eco130I	CCWWGG	2 cut(s)	879, 1220
Eco147I	AGGCCT	2 cut(s)	704, 1690
Eco24I	GRGCYC	2 cut(s)	322, 1736
Eco32I	GATATC	3 cut(s)	153, 340, 370
Eco47I	GGWCC	2 cut(s)	260, 950
Eco53kI	GAGCTC	1 cut(s)	320
Eco57I	CTGAAG	2 cut(s)	369, 1614
Eco81I	CCTNAGG	1 cut(s)	293
Eco88I	CYCGRG	1 cut(s)	962
EcoICRI	GAGCTC	1 cut(s)	320
EcoRII	CCWGG	3 cut(s)	639, 747, 923
EcoRV	GATATC	3 cut(s)	153, 340, 370
EcoT14I	CCWWGG	2 cut(s)	879, 1220
EcoT38I	GRGCYC	2 cut(s)	322, 1736
ErhI	CCWWGG	2 cut(s)	879, 1220
Esp3I	CGTCTC	1 cut(s)	1010
FaeI	CATG	7 cut(s)	326, 455, 526, 883, 1372, 1544, 1720
FalI	AAGNNNNNCTT	2 cut(s)	581, 613
FaqI	GGGAC	2 cut(s)	730, 1631
FatI	CATG	7 cut(s)	322, 451, 522, 879, 1368, 1540, 1716
FauNDI	CATATG	3 cut(s)	58, 819, 899
Fnu4HI	GCNGC	7 cut(s)	981, 1299, 1302, 1363, 1400, 1599, 1611
FokI	GGATG	3 cut(s)	360, 405, 656
FriOI	GRGCYC	2 cut(s)	322, 1736
Fsp4HI	GCNGC	7 cut(s)	981, 1299, 1302, 1363, 1400, 1599, 1611
FspAI	RTGCGCAY	1 cut(s)	196
FspBI	CTAG	2 cut(s)	1353, 1724
FspI	TGCGCA	1 cut(s)	196
GlaI	GCGC	1 cut(s)	196
GluI	GCNGC	7 cut(s)	981, 1299, 1302, 1363, 1400, 1599, 1611
GsaI	CCCAGC	1 cut(s)	1015
GsuI	CTGGAG	2 cut(s)	150, 1184
HaeIII	GGCC	5 cut(s)	521, 704, 1365, 1382, 1690
HapII	CCGG	4 cut(s)	247, 315, 377, 1028
HgaI	GACGC	1 cut(s)	282
HhaI	GCGC	1 cut(s)	197
Hin1I	GRCGYC	1 cut(s)	1162
Hin1II	CATG	7 cut(s)	326, 455, 526, 883, 1372, 1544, 1720
Hin6I	GCGC	1 cut(s)	195
HinP1I	GCGC	1 cut(s)	195
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HinfI	GANTC	4 cut(s)	175, 226, 1024, 1660
HpaII	CCGG	4 cut(s)	247, 315, 377, 1028
Hpy166II	GTNNAC	3 cut(s)	238, 606, 637
Hpy188I	TCNGA	6 cut(s)	207, 658, 895, 915, 1411, 1738
Hpy188III	TCNNGA	6 cut(s)	295, 365, 377, 626, 962, 1504
Hpy8I	GTNNAC	3 cut(s)	238, 606, 637
HpyAV	CCTTC	5 cut(s)	202, 325, 623, 1026, 1723
HpyCH4III	ACNGT	5 cut(s)	514, 784, 1342, 1564, 1680
HpyCH4IV	ACGT	1 cut(s)	1162
HpyF10VI	GCNNNNNNNGC	4 cut(s)	881, 1295, 1598, 1607
HpyF3I	CTNAG	9 cut(s)	293, 306, 501, 570, 706, 914, 1408, 1482, 1696
HpySE526I	ACGT	1 cut(s)	1162
Hsp92I	GRCGYC	1 cut(s)	1162
Hsp92II	CATG	7 cut(s)	326, 455, 526, 883, 1372, 1544, 1720
HspAI	GCGC	1 cut(s)	195
Kpn2I	TCCGGA	1 cut(s)	376
KpnI	GGTACC	1 cut(s)	8
Kzo9I	GATC	4 cut(s)	787, 1056, 1112, 1500
LmnI	GCTCC	4 cut(s)	294, 317, 1462, 1739
Lsp1109I	GCAGC	5 cut(s)	992, 1285, 1288, 1386, 1585
LweI	GCATC	3 cut(s)	965, 1579, 1663
MaeI	CTAG	2 cut(s)	1353, 1724
MaeII	ACGT	1 cut(s)	1162
MaeIII	GTNAC	4 cut(s)	64, 934, 1342, 1443
MalI	GATC	4 cut(s)	789, 1058, 1114, 1502
MbiI	CCGCTC	1 cut(s)	1610
MboI	GATC	4 cut(s)	787, 1056, 1112, 1500
MflI	RGATCY	1 cut(s)	1112
MhlI	GDGCHC	2 cut(s)	322, 1736
MmeI	TCCRAC	1 cut(s)	1491
MroI	TCCGGA	1 cut(s)	376
MroXI	GAANNNNTTC	1 cut(s)	1704
MseI	TTAA	8 cut(s)	18, 468, 566, 588, 732, 828, 986, 1227
MslI	CAYNNNNRTG	1 cut(s)	1201
MspA1I	CMGCKG	1 cut(s)	1011
MspI	CCGG	4 cut(s)	247, 315, 377, 1028
MspR9I	CCNGG	5 cut(s)	248, 641, 749, 925, 1029
MvaI	CCWGG	3 cut(s)	641, 749, 925
MwoI	GCNNNNNNNGC	4 cut(s)	881, 1295, 1598, 1607
NciI	CCSGG	2 cut(s)	248, 1029
NcoI	CCATGG	1 cut(s)	879
NdeI	CATATG	3 cut(s)	58, 819, 899
NdeII	GATC	4 cut(s)	787, 1056, 1112, 1500
NlaIII	CATG	7 cut(s)	326, 455, 526, 883, 1372, 1544, 1720
NlaIV	GGNNCC	4 cut(s)	6, 245, 1464, 1735
NmuCI	GTSAC	2 cut(s)	64, 1443
NsbI	TGCGCA	1 cut(s)	196
NspI	RCATGY	1 cut(s)	1544
NspV	TTCGAA	1 cut(s)	1439
OliI	CACNNNNGTG	1 cut(s)	1201
PceI	AGGCCT	2 cut(s)	704, 1690
PciI	ACATGT	1 cut(s)	1540
PdmI	GAANNNNTTC	1 cut(s)	1704
PfeI	GAWTC	4 cut(s)	175, 226, 1024, 1660
PflMI	CCANNNNNTGG	1 cut(s)	269
PfoI	TCCNGGA	1 cut(s)	1027
PkrI	GCNGC	7 cut(s)	982, 1300, 1303, 1364, 1401, 1600, 1612
PscI	ACATGT	1 cut(s)	1540
Psp124BI	GAGCTC	1 cut(s)	322
Psp6I	CCWGG	3 cut(s)	639, 747, 923
PspFI	CCCAGC	1 cut(s)	1011
PspGI	CCWGG	3 cut(s)	639, 747, 923
PspN4I	GGNNCC	4 cut(s)	6, 245, 1464, 1735
PspPI	GGNCC	2 cut(s)	260, 950
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	1 cut(s)	1112
PvuII	CAGCTG	1 cut(s)	1011
RsaI	GTAC	4 cut(s)	6, 30, 346, 1406
RsaNI	GTAC	4 cut(s)	5, 29, 345, 1405
RseI	CAYNNNNRTG	1 cut(s)	1201
SacI	GAGCTC	1 cut(s)	322
SaqAI	TTAA	8 cut(s)	18, 468, 566, 588, 732, 828, 986, 1227
SatI	GCNGC	7 cut(s)	981, 1299, 1302, 1363, 1400, 1599, 1611
Sau3AI	GATC	4 cut(s)	787, 1056, 1112, 1500
Sau96I	GGNCC	2 cut(s)	260, 950
ScaI	AGTACT	1 cut(s)	346
ScrFI	CCNGG	5 cut(s)	248, 641, 749, 925, 1029
SduI	GDGCHC	2 cut(s)	322, 1736
SfaNI	GCATC	3 cut(s)	965, 1579, 1663
SfcI	CTRYAG	1 cut(s)	783
SfuI	TTCGAA	1 cut(s)	1439
SinI	GGWCC	2 cut(s)	260, 950
SmiMI	CAYNNNNRTG	1 cut(s)	1201
SmlI	CTYRAG	1 cut(s)	363
SmoI	CTYRAG	1 cut(s)	363
SseBI	AGGCCT	2 cut(s)	704, 1690
SsiI	CCGC	5 cut(s)	14, 434, 1362, 1601, 1610
SspI	AATATT	2 cut(s)	466, 868
SspMI	CTAG	2 cut(s)	1353, 1724
SstI	GAGCTC	1 cut(s)	322
StuI	AGGCCT	2 cut(s)	704, 1690
StyD4I	CCNGG	5 cut(s)	246, 639, 747, 923, 1027
StyI	CCWWGG	2 cut(s)	879, 1220
TaaI	ACNGT	5 cut(s)	514, 784, 1342, 1564, 1680
TaiI	ACGT	1 cut(s)	1165
TaqI	TCGA	3 cut(s)	790, 1439, 1503
TaqII	GACCGA	1 cut(s)	879
TatI	WGTACW	3 cut(s)	28, 344, 1404
TauI	GCSGC	2 cut(s)	1365, 1613
TfiI	GAWTC	4 cut(s)	175, 226, 1024, 1660
Tru1I	TTAA	8 cut(s)	18, 468, 566, 588, 732, 828, 986, 1227
Tru9I	TTAA	8 cut(s)	18, 468, 566, 588, 732, 828, 986, 1227
TscAI	CASTG	7 cut(s)	185, 436, 689, 946, 1208, 1395, 1683
TseFI	GTSAC	2 cut(s)	64, 1443
TseI	GCWGC	5 cut(s)	980, 1298, 1301, 1399, 1598
Tsp45I	GTSAC	2 cut(s)	64, 1443
TspDTI	ATGAA	8 cut(s)	440, 684, 962, 1019, 1251, 1266, 1697, 1705
TspRI	CASTG	7 cut(s)	185, 436, 689, 946, 1208, 1395, 1683
Van91I	CCANNNNNTGG	1 cut(s)	269
VpaK11BI	GGWCC	2 cut(s)	260, 950
XapI	RAATTY	1 cut(s)	251
XceI	RCATGY	1 cut(s)	1544
XmnI	GAANNNNTTC	1 cut(s)	1704
XspI	CTAG	2 cut(s)	1353, 1724
ZraI	GACGTC	1 cut(s)	1163
ZrmI	AGTACT	1 cut(s)	346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.