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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g08080 |
| rosa_chinensis | RchiOBHm_Chr3g0457771 |
| rosa_laevigata | RLG00000009522 RLG00000025118 |
| rosa_multiflora | Rmu_sc0012092.1_g000004 Rmu_sc0012092.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00063300 Rroxscaffold_1G00063360 Rroxscaffold_1G00063370 Rroxscaffold_6G00421500 |
| rosa_samantha | Rh3AG092100 Rh3BG094600 Rh3CG086800 Rh3CG087000 Rh4AG070100 Rh4BG067900 Rh4CG075800 Rh5AG102600 Rh5BG098900 Rh5BG099300 Rh5BG099700 Rh5CG111000 Rh5DG098100 Rh5DG098200 |
| rosa_wichuraiana | Rw0G012270 Rw5G008960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 134 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 300 |
| Acc36I | ACCTGC | 1 cut(s) | 134 |
| AciI | CCGC | 1 cut(s) | 140 |
| AflIII | ACRYGT | 3 cut(s) | 229, 299, 352 |
| AluBI | AGCT | 5 cut(s) | 59, 221, 260, 323, 344 |
| AluI | AGCT | 5 cut(s) | 59, 221, 260, 323, 344 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 347 |
| ApeKI | GCWGC | 1 cut(s) | 323 |
| AsuHPI | GGTGA | 4 cut(s) | 158, 236, 265, 388 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 341, 374 |
| BbvI | GCAGC | 1 cut(s) | 310 |
| BccI | CCATC | 1 cut(s) | 373 |
| BceAI | ACGGC | 1 cut(s) | 83 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BfuAI | ACCTGC | 1 cut(s) | 134 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 140 |
| BisI | GCNGC | 2 cut(s) | 141, 324 |
| BlsI | GCNGC | 2 cut(s) | 142, 325 |
| BmsI | GCATC | 1 cut(s) | 82 |
| BpmI | CTGGAG | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 1 cut(s) | 289 |
| BseDI | CCNNGG | 1 cut(s) | 289 |
| BseGI | GGATG | 2 cut(s) | 164, 274 |
| BseXI | GCAGC | 1 cut(s) | 310 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspMI | ACCTGC | 1 cut(s) | 134 |
| BssECI | CCNNGG | 1 cut(s) | 289 |
| BssMI | GATC | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 2 cut(s) | 262, 385 |
| BstF5I | GGATG | 2 cut(s) | 164, 274 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 140 |
| BstNSI | RCATGY | 2 cut(s) | 303, 387 |
| BstV1I | GCAGC | 1 cut(s) | 310 |
| BtsCI | GGATG | 2 cut(s) | 164, 274 |
| BveI | ACCTGC | 1 cut(s) | 134 |
| Cac8I | GCNNGC | 2 cut(s) | 262, 385 |
| CaiI | CAGNNNCTG | 1 cut(s) | 347 |
| CviAII | CATG | 5 cut(s) | 96, 265, 300, 384, 388 |
| CviJI | RGCY | 5 cut(s) | 59, 221, 260, 323, 344 |
| CviKI_1 | RGCY | 5 cut(s) | 59, 221, 260, 323, 344 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 300 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 300 |
| Eco32I | GATATC | 1 cut(s) | 127 |
| EcoRV | GATATC | 1 cut(s) | 127 |
| EcoT22I | ATGCAT | 2 cut(s) | 97, 389 |
| FaeI | CATG | 5 cut(s) | 99, 268, 303, 387, 391 |
| FaiI | YATR | 8 cut(s) | 28, 81, 97, 111, 266, 301, 385, 389 |
| FatI | CATG | 5 cut(s) | 95, 264, 299, 383, 387 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| Fnu4HI | GCNGC | 2 cut(s) | 141, 324 |
| FokI | GGATG | 2 cut(s) | 171, 281 |
| Fsp4HI | GCNGC | 2 cut(s) | 141, 324 |
| GluI | GCNGC | 2 cut(s) | 141, 324 |
| GsuI | CTGGAG | 1 cut(s) | 326 |
| Hin1II | CATG | 5 cut(s) | 99, 268, 303, 387, 391 |
| HinfI | GANTC | 2 cut(s) | 149, 294 |
| HphI | GGTGA | 4 cut(s) | 158, 236, 265, 388 |
| Hpy166II | GTNNAC | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 293 |
| Hpy188III | TCNNGA | 2 cut(s) | 305, 347 |
| Hpy8I | GTNNAC | 1 cut(s) | 227 |
| HpyCH4IV | ACGT | 3 cut(s) | 51, 229, 352 |
| HpyCH4V | TGCA | 3 cut(s) | 95, 173, 387 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 140 |
| HpySE526I | ACGT | 3 cut(s) | 51, 229, 352 |
| Hsp92II | CATG | 5 cut(s) | 99, 268, 303, 387, 391 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LmnI | GCTCC | 1 cut(s) | 349 |
| LpnPI | CCDG | 6 cut(s) | 129, 207, 290, 318, 354, 360 |
| Lsp1109I | GCAGC | 1 cut(s) | 310 |
| LweI | GCATC | 1 cut(s) | 82 |
| MaeII | ACGT | 3 cut(s) | 51, 229, 352 |
| MaeIII | GTNAC | 1 cut(s) | 52 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MluCI | AATT | 1 cut(s) | 394 |
| MlyI | GAGTC | 1 cut(s) | 288 |
| MnlI | CCTC | 4 cut(s) | 39, 240, 299, 301 |
| Mph1103I | ATGCAT | 2 cut(s) | 97, 389 |
| MslI | CAYNNNNRTG | 1 cut(s) | 157 |
| MspA1I | CMGCKG | 2 cut(s) | 59, 140 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 140 |
| NdeII | GATC | 1 cut(s) | 40 |
| NlaIII | CATG | 5 cut(s) | 99, 268, 303, 387, 391 |
| NsiI | ATGCAT | 2 cut(s) | 97, 389 |
| NspI | RCATGY | 2 cut(s) | 303, 387 |
| PaeI | GCATGC | 1 cut(s) | 387 |
| PaqCI | CACCTGC | 1 cut(s) | 134 |
| PciI | ACATGT | 1 cut(s) | 299 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PkrI | GCNGC | 2 cut(s) | 142, 325 |
| PleI | GAGTC | 1 cut(s) | 288 |
| PpsI | GAGTC | 1 cut(s) | 288 |
| PscI | ACATGT | 1 cut(s) | 299 |
| PstNI | CAGNNNCTG | 1 cut(s) | 347 |
| PvuII | CAGCTG | 1 cut(s) | 59 |
| RseI | CAYNNNNRTG | 1 cut(s) | 157 |
| SatI | GCNGC | 2 cut(s) | 141, 324 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| SchI | GAGTC | 1 cut(s) | 288 |
| SfaNI | GCATC | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 157 |
| SphI | GCATGC | 1 cut(s) | 387 |
| Sse9I | AATT | 1 cut(s) | 394 |
| SsiI | CCGC | 1 cut(s) | 140 |
| TaiI | ACGT | 3 cut(s) | 54, 232, 355 |
| TasI | AATT | 1 cut(s) | 394 |
| TauI | GCSGC | 1 cut(s) | 143 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| TseI | GCWGC | 1 cut(s) | 323 |
| XceI | RCATGY | 2 cut(s) | 303, 387 |
| Zsp2I | ATGCAT | 2 cut(s) | 97, 389 |