FvH4_6g08280

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0001181
Physical Location & Seq
Reverse (-)
4916842 .. 4921201
4360 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g08280.t1

Sequence Viewer

Length: 3198 bp
ATGGCTGATAATCGGAATGGAAATGGTAAACCTACGAAGGGTGCTGGAGCCGGAAATAATCCTTATGCCATTGACTTGAATGTTTTCAGTCAGAGGTTGAAGGCTCTGTATTCGCACTGGAATGAGCACCCTGAGTTGTGGGATTCTTGTGAGGTTATTGCAATTGCAACACCGCCGCAGTCAGATGAAATCCGGTACCTTAAATCTTCGGCATTACAGATGTGGATGGTTGGTTATGATGTTCCAGATACGATAATGGTTTTCATGAAGAAGCATATTCATTTCTTGGGTAGCCAGAAGAAGGTGTCTTTTTTCCAAGGTGTGAAGAAGGCTGCCAAAGAGGCTGTGGGTGTTGATCTTGTGACGCATGTGAAGGCAAAGAGTGATGATGGCGGTGCTCTGATGGATGCTGTTTTGGGTGTCATTCGTGCTCAACCAAGGGCTGATGGCCATGATACTGTTGTTGTAGGTAGGATAGCAAGGGAGGAACCAGAGGGGAATCTTTTGAAATTGTGGTTTGAGAAGCTGAAGAGTGCAACTGTTCAGCTTGGTGATGTAACAAATGGGTTGTCTGACTTGTTTGCTGTCAAGGAGAAAGAGGAACTTGGTGATATCAAGAAGGCTGCTTACTTAAGTAGTGTTGTCATGCAGAAAATGGTGACGAAGCTTGAGAATGTAATTGATGATGAGAAGAAAGTCACTCACTCTTCTTTGATGGATGAGACAGAGAAACTTATATTGGAACCCTCTAAAGTTGGGCTGAAGCTCAATCCTCAGAATGTTGATATCTGTTACCCTCCAATCTTTCAGAGTGGAGGAAAGTTTGATCTCAGACCTGGTGCTGCCAGCAATGACGAGTGTCTTTATTATGATCGTGCCAGTGTGATCATATGTGCTATTGGATCCCGTTATCACAATTACTGCTCGAATGCTGCCAGGACTTTTTTGATTGATGCCAATTCCATTCAGAGCAAGGCATATGATGTTCTTCTCAAGGCCCATGCTGCAGCCATTAGTGAGTTGAAGCCTGAAAGTAAAGCCAGTGCAGCATATCTAGCTGCACTTTCTGTTGTAGAGAAGGATGCTCCTGAACTATTACCTAATCTGACAAAATCTACGGGGACAGGCATTGGTATTGAGTTCCGCGAATCTGGGTTGAATCTTAATGGAAAAAATGACAGGGTGCTGAAAGCAGGCATGGTCTTTAATGTGTCACTCGGTTTTCATAACTTGCAGAGTGGTATCAGTAATTCAAAGCAGCAGAACTTCTCCTTGTTGCTAGCTGACACGGTTGTTGTCAACGATGACAAACCAGAGGTGCTGACAGCAAAAGTTTCTAAAGCTGTTAAAGATGTGGCATACTCCTTCAATGAAGTTGAAGAAAAGCCAGTGAAAGGAAAAGGTCCGGCTAATGGAACAGAGGCGTTGATATCTAAAACCAACCTGAGGTCGGATAATAGTGAGAAATCAAAGGAGGAGCAGCGCAGGCACCACCAGGCAGAACTAGCCCGCCAGAAAAATGAAGAAACTGCCCGCAGACTTGCTGGTGATGCACCTGGATCAGGTAATAATCGTTCCACTGCAAAGTCTTCAGCCGATTTAGTTGCCTACAAGAATGTAAACGATCTCGCTCCTAAAAGAGATCTGATGATTCAAGTTGACCAGAACAATGAAGCGGTTCTTTTGCCTATTTATGGGAGCATGGTCCCTTTTCATGTTGCCACCATAAGGACAGTTAGTGTCCAAGCAGAGTCAGCCAGCACCAACCAGGCTTCTTATATCAGAATCATCTTTAATGTTCCTGGGACTCCTTTTAGTCCTCATGATACAAACTCACTGAAAAACTTGGGTTCTATATATTTAAAGGAAGTCTCGTTTCGCTCCAAGGACACAAGGCACATTAATGAAGTCACACAGGTGATAAAAAACCTCCGGAAGCGAGTTGTGTCCAGGGAGAATGAGAGAGCTGAAAGGGCAACACTTGTTACTCAGGAGAAACTCCAACTAGCTGGTAACAAATTTAAGCCTCTGAGATTGAATGACCTCTGGATTCGACCTGTTTTTGGTGGACGAGGCAGAAAGATTCCTGGTACTCTTGAAGCTCATGCAAATGGGTTTCGTTACTCTACCAGCAGGCAAGATGAGCGTGTGGATGTAATGTATGGAAATATTAAGCATGCTTTTTTCCAGCCAGCAGAGAATGAGATGATCACTCTCCTTCATTTTCATCTTCACAATCACATTATGGTGGGCAACAAGAAAACCAAAGATGTGCAATTCTATGTGGAGGTTATGGATGTAGTTCAGACCTTAAGTGGAAAGAGATCTGCCTATGACCCAGATGAGATTGAAGAAGAGCAAAGAGAGAGAGCTAGGAAGAACAAAGTCAACACTGAATTTCGGACGTTTGTGAGTAGGGTACAGGATCTTTGGCAGCAGCCCCAGTTTGAAGGCCTTGAACTTGAGTTTGATCAGCCTTTCAGGGACCTTGGTTTCCATGGTGTGCCTTACAAATCCTCAGCATATATCGTCCCCACTACAAATTGCTTGGTTGAACTGATTGAAAATCCTTTTCTTGTTGTCACTCTTGCTGAGATTGAAATTGTGAATCTGGAAAGGGTTGGGCTTGGACAGAAGAATTTTGACATGGCAATTGTATTTAAGGATTTTAAAAAAGATGTTCTTCGGATCGATTCTATTCCATCAACATCACTTGAAGGTATCAAGGAATGGCTTGACGACACAGAGATCAAGTACTATGAGAGCAGGATGAATCTGTCATGGAAACCTATACTGAAGACAATTACTGAGGATCCGCAGAGCTTCCTTGATAATGGAGGTTGGGAGTTTTTGAATTTGGAGGGAACAGATTCAGACTCTGAGCAATCTCAGGAGTCAGACCAGGGTTATGAACCATCTGATATGGAATCCGAATCAGAATCAGAGGATGATTCTTCTGATAGTGAATCGCTTGTGGAGTCTGAGGACGATGATGAGGAAGATTCAGAAGAAGTCTCTGAGGGTGAGGAGGGAAAGACATGGGAAGAGTTGGAGAGGGAAGCAAGCAATGCAGACAAGGAGAAAGGTAATGAGTCTGACAGCGAGGAGGAGAGGAAGAGAAGGAAGATGAAAGCTTTTGGCAAGGGTCGAGCCCCTCCTGCTGGTGGCATCCCGAAGCGGTCCAAGTTGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

1066

Amino Acids

119.08

Weight (kDa)

5.59

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FACT-Spt16_Nlob PF14826 24 - 188 2.3e-39 FACT complex subunit SPT16 N-terminal lobe domain
Peptidase_M24 PF00557 205 - 434 4.7e-29 Metallopeptidase family M24
SPT16 PF08644 551 - 667 4.7e-35 FACT complex subunit (SPT16/CDC68)
PH_SPT16 PF24824 678 - 807 4.2e-54 FACT complex subunit SPT16 PH-like domain
Rttp106-like_middle PF08512 834 - 921 2.5e-23 Histone chaperone Rttp106-like, middle domain
SPT16_C PF21091 961 - 1042 8.2e-17 FACT complex subunit SPT16, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 195
AccB1I GGYRCC 2 cut(s) 195, 1488
AccII CGCG 1 cut(s) 1146
AccIII TCCGGA 1 cut(s) 1932
AciI CCGC 9 cut(s) 173, 176, 393, 1144, 1510, 1534, 1676, 2816, 3178
AclWI GGATC 7 cut(s) 897, 910, 1567, 2433, 2696, 2807, 2820
AcoI YGGCCR 1 cut(s) 448
AcsI RAATTY 4 cut(s) 2018, 2396, 2638, 2854
AcuI CTGAAG 4 cut(s) 548, 782, 1575, 2816
AfaI GTAC 4 cut(s) 197, 2092, 2421, 2756
AflII CTTAAG 2 cut(s) 631, 2311
AjnI CCWGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
AjuI GAANNNNNNNTTGG 2 cut(s) 722, 754
AleI CACNNNNGTG 1 cut(s) 1916
Alw21I GWGCWC 3 cut(s) 129, 400, 433
Alw26I GTCTC 3 cut(s) 716, 1876, 3019
AlwI GGATC 7 cut(s) 897, 910, 1567, 2433, 2696, 2807, 2820
AlwNI CAGNNNCTG 1 cut(s) 2879
Aor13HI TCCGGA 1 cut(s) 1932
AoxI GGCC 3 cut(s) 448, 996, 2452
ApoI RAATTY 4 cut(s) 2018, 2396, 2638, 2854
ArsI GACNNNNNNTTYG 2 cut(s) 554, 586
AseI ATTAAT 1 cut(s) 1902
Asp700I GAANNNNTTC 3 cut(s) 83, 1677, 2869
Asp718I GGTACC 1 cut(s) 195
AspLEI GCGC 1 cut(s) 1485
AspS9I GGNCC 5 cut(s) 997, 1403, 1705, 2485, 3180
AsuHPI GGTGA 6 cut(s) 563, 620, 670, 1559, 1930, 3035
AsuNHI GCTAGC 1 cut(s) 1279
AvaII GGWCC 4 cut(s) 1403, 1705, 2485, 3180
AxyI CCTNAGG 1 cut(s) 1445
BaeI ACNNNNGTAYC 2 cut(s) 447, 480
BalI TGGCCA 1 cut(s) 450
BamHI GGATCC 2 cut(s) 902, 2812
BanI GGYRCC 2 cut(s) 195, 1488
BanII GRGCYC 1 cut(s) 3154
BarI GAAGNNNNNNTAC 2 cut(s) 611, 643
BbsI GAAGAC 2 cut(s) 1581, 2804
Bbv12I GWGCWC 3 cut(s) 129, 400, 433
BbvCI CCTCAGC 1 cut(s) 2518
BccI CCATC 7 cut(s) 220, 383, 397, 440, 709, 2710, 2923
BcgI CGANNNNNNTGC 2 cut(s) 1586, 1620
BciT130I CCWGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
BclI TGATCA 3 cut(s) 885, 2208, 2470
BcoDI GTCTC 3 cut(s) 716, 1876, 3019
BfaI CTAG 5 cut(s) 1055, 1280, 1505, 2006, 2373
BfmI CTRYAG 1 cut(s) 1005
BfrI CTTAAG 2 cut(s) 631, 2311
BglI GCCNNNNNGGC 1 cut(s) 341
BglII AGATCT 2 cut(s) 1642, 2324
BmcAI AGTACT 1 cut(s) 2756
Bme1390I CCNGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
Bme18I GGWCC 4 cut(s) 1403, 1705, 2485, 3180
BmgT120I GGNCC 5 cut(s) 997, 1403, 1705, 2485, 3180
BmiI GGNNCC 9 cut(s) 49, 197, 489, 744, 904, 1490, 1707, 2486, 2814
BmrFI CCNGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
BmrI ACTGGG 1 cut(s) 2437
BmsI GCATC 5 cut(s) 397, 943, 1072, 1540, 3177
BmtI GCTAGC 1 cut(s) 1283
BmuI ACTGGG 1 cut(s) 2437
BoxI GACNNNNGTC 1 cut(s) 858
BpiI GAAGAC 2 cut(s) 1581, 2804
BpmI CTGGAG 1 cut(s) 66
Bpu10I CCTNAGC 1 cut(s) 2518
BpuEI CTTGAG 3 cut(s) 689, 977, 2483
Bsa29I ATCGAT 1 cut(s) 2691
BsaJI CCNNGG 8 cut(s) 316, 437, 1802, 1884, 1950, 2488, 2497, 2902
BsaWI WCCGGW 2 cut(s) 192, 1932
Bse1I ACTGG 5 cut(s) 122, 879, 1041, 1388, 2443
Bse21I CCTNAGG 1 cut(s) 1445
Bse3DI GCAATG 2 cut(s) 856, 3073
BseAI TCCGGA 1 cut(s) 1932
BseBI CCWGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
BseCI ATCGAT 1 cut(s) 2691
BseDI CCNNGG 8 cut(s) 316, 437, 1802, 1884, 1950, 2488, 2497, 2902
BseGI GGATG 9 cut(s) 231, 412, 724, 1087, 2158, 2302, 2775, 2953, 3168
BseMI GCAATG 2 cut(s) 856, 3073
BseNI ACTGG 5 cut(s) 122, 879, 1041, 1388, 2443
BseRI GAGGAG 4 cut(s) 1490, 3041, 3119, 3122
BsgI GTGCAG 2 cut(s) 1044, 1065
Bsh1236I CGCG 1 cut(s) 1146
BshFI GGCC 3 cut(s) 450, 998, 2454
BshNI GGYRCC 2 cut(s) 195, 1488
BshVI ATCGAT 1 cut(s) 2691
BsiHKAI GWGCWC 3 cut(s) 129, 400, 433
BsiSI CCGG 4 cut(s) 51, 193, 1406, 1933
BslFI GGGAC 5 cut(s) 1135, 1691, 1819, 2498, 2516
BsmAI GTCTC 3 cut(s) 716, 1876, 3019
BsmFI GGGAC 5 cut(s) 1135, 1691, 1819, 2498, 2516
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 3 cut(s) 450, 998, 2454
Bsp1286I GDGCHC 4 cut(s) 129, 400, 433, 3154
Bsp13I TCCGGA 1 cut(s) 1932
Bsp19I CCATGG 1 cut(s) 2497
BspACI CCGC 9 cut(s) 173, 176, 393, 1144, 1510, 1534, 1676, 2816, 3178
BspANI GGCC 3 cut(s) 450, 998, 2454
BspDI ATCGAT 1 cut(s) 2691
BspEI TCCGGA 1 cut(s) 1932
BspFNI CGCG 1 cut(s) 1146
BspHI TCATGA 2 cut(s) 264, 1822
BspLI GGNNCC 9 cut(s) 49, 197, 489, 744, 904, 1490, 1707, 2486, 2814
BspMAI CTGCAG 1 cut(s) 1009
BspOI GCTAGC 1 cut(s) 1283
BspPI GGATC 7 cut(s) 897, 910, 1567, 2433, 2696, 2807, 2820
BspQI GCTCTTC 1 cut(s) 2349
BspT107I GGYRCC 2 cut(s) 195, 1488
BspTI CTTAAG 2 cut(s) 631, 2311
BsrDI GCAATG 2 cut(s) 856, 3073
BsrI ACTGG 5 cut(s) 122, 879, 1041, 1388, 2443
BssECI CCNNGG 8 cut(s) 316, 437, 1802, 1884, 1950, 2488, 2497, 2902
BssT1I CCWWGG 5 cut(s) 316, 437, 1884, 2488, 2497
Bst2UI CCWGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
Bst4CI ACNGT 4 cut(s) 460, 541, 1291, 1735
Bst6I CTCTTC 5 cut(s) 524, 712, 2349, 3039, 3110
BstAFI CTTAAG 2 cut(s) 631, 2311
BstAPI GCANNNNNTGC 1 cut(s) 3068
BstDSI CCRYGG 1 cut(s) 2497
BstENI CCTNNNNNAGG 1 cut(s) 1560
BstF5I GGATG 9 cut(s) 231, 412, 724, 1087, 2158, 2302, 2775, 2953, 3168
BstFNI CGCG 1 cut(s) 1146
BstHHI GCGC 1 cut(s) 1485
BstMAI GTCTC 3 cut(s) 716, 1876, 3019
BstNI CCWGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
BstNSI RCATGY 2 cut(s) 371, 2180
BstPAI GACNNNNGTC 1 cut(s) 858
BstSCI CCNGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
BstSFI CTRYAG 1 cut(s) 1005
BstUI CGCG 1 cut(s) 1146
BstV2I GAAGAC 2 cut(s) 1581, 2804
BstX2I RGATCY 5 cut(s) 902, 1642, 2324, 2425, 2812
BstXI CCANNNNNNTGG 1 cut(s) 2009
BstYI RGATCY 5 cut(s) 902, 1642, 2324, 2425, 2812
Bsu15I ATCGAT 1 cut(s) 2691
Bsu36I CCTNAGG 1 cut(s) 1445
BsuRI GGCC 3 cut(s) 450, 998, 2454
BsuTUI ATCGAT 1 cut(s) 2691
BtgI CCRYGG 1 cut(s) 2497
BtsCI GGATG 9 cut(s) 231, 412, 724, 1087, 2158, 2302, 2775, 2953, 3168
BtsI GCAGTG 1 cut(s) 1578
BtsIMutI CAGTG 7 cut(s) 115, 886, 1048, 1395, 1578, 1835, 2391
CaiI CAGNNNCTG 1 cut(s) 2879
CciI TCATGA 2 cut(s) 264, 1822
CfoI GCGC 1 cut(s) 1485
Cfr13I GGNCC 5 cut(s) 997, 1403, 1705, 2485, 3180
ClaI ATCGAT 1 cut(s) 2691
CseI GACGC 1 cut(s) 373
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 4 cut(s) 196, 2091, 2420, 2755
CviQI GTAC 4 cut(s) 196, 2091, 2420, 2755
DraI TTTAAA 2 cut(s) 1863, 2671
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 5 cut(s) 524, 712, 2349, 3039, 3110
EarI CTCTTC 5 cut(s) 524, 712, 2349, 3039, 3110
Eco130I CCWWGG 5 cut(s) 316, 437, 1884, 2488, 2497
Eco147I AGGCCT 1 cut(s) 2454
Eco24I GRGCYC 1 cut(s) 3154
Eco32I GATATC 3 cut(s) 613, 787, 1431
Eco47I GGWCC 4 cut(s) 1403, 1705, 2485, 3180
Eco57I CTGAAG 4 cut(s) 548, 782, 1575, 2816
Eco81I CCTNAGG 1 cut(s) 1445
EcoNI CCTNNNNNAGG 1 cut(s) 1560
EcoO109I RGGNCCY 1 cut(s) 2485
EcoRII CCWGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
EcoRV GATATC 3 cut(s) 613, 787, 1431
EcoT14I CCWWGG 5 cut(s) 316, 437, 1884, 2488, 2497
EcoT38I GRGCYC 1 cut(s) 3154
ErhI CCWWGG 5 cut(s) 316, 437, 1884, 2488, 2497
FalI AAGNNNNNCTT 6 cut(s) 588, 620, 1665, 1697, 2667, 2699
FaqI GGGAC 5 cut(s) 1135, 1691, 1819, 2498, 2516
FauI CCCGC 2 cut(s) 1517, 1541
FauNDI CATATG 2 cut(s) 890, 979
FbaI TGATCA 3 cut(s) 885, 2208, 2470
FokI GGATG 9 cut(s) 238, 419, 731, 1094, 2165, 2309, 2782, 2960, 3155
FriOI GRGCYC 1 cut(s) 3154
FspBI CTAG 5 cut(s) 1055, 1280, 1505, 2006, 2373
GlaI GCGC 1 cut(s) 1484
GsuI CTGGAG 1 cut(s) 66
HaeIII GGCC 3 cut(s) 450, 998, 2454
HapII CCGG 4 cut(s) 51, 193, 1406, 1933
HgaI GACGC 1 cut(s) 373
HhaI GCGC 1 cut(s) 1485
Hin6I GCGC 1 cut(s) 1483
HinP1I GCGC 1 cut(s) 1483
HincII GTYRAC 3 cut(s) 1300, 1660, 2389
HindII GTYRAC 3 cut(s) 1300, 1660, 2389
HindIII AAGCTT 2 cut(s) 665, 3132
HpaII CCGG 4 cut(s) 51, 193, 1406, 1933
HphI GGTGA 6 cut(s) 563, 620, 670, 1559, 1930, 3035
Hpy166II GTNNAC 6 cut(s) 29, 1300, 1621, 1660, 2069, 2389
Hpy8I GTNNAC 6 cut(s) 29, 1300, 1621, 1660, 2069, 2389
HpyCH4III ACNGT 4 cut(s) 460, 541, 1291, 1735
HpyCH4IV ACGT 1 cut(s) 2405
HpySE526I ACGT 1 cut(s) 2405
HspAI GCGC 1 cut(s) 1483
Kpn2I TCCGGA 1 cut(s) 1932
KpnI GGTACC 1 cut(s) 199
Ksp22I TGATCA 3 cut(s) 885, 2208, 2470
LguI GCTCTTC 1 cut(s) 2349
LmnI GCTCC 6 cut(s) 47, 1090, 1477, 1636, 1698, 1886
LweI GCATC 5 cut(s) 397, 943, 1072, 1540, 3177
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 5 cut(s) 1055, 1280, 1505, 2006, 2373
MaeII ACGT 1 cut(s) 2405
MfeI CAATTG 2 cut(s) 162, 2652
MflI RGATCY 5 cut(s) 902, 1642, 2324, 2425, 2812
MhlI GDGCHC 4 cut(s) 129, 400, 433, 3154
MlsI TGGCCA 1 cut(s) 450
MluNI TGGCCA 1 cut(s) 450
MlyI GAGTC 6 cut(s) 1760, 1801, 2870, 2903, 2987, 3101
MmeI TCCRAC 3 cut(s) 1431, 2026, 3030
Mox20I TGGCCA 1 cut(s) 450
MroI TCCGGA 1 cut(s) 1932
MroXI GAANNNNTTC 3 cut(s) 83, 1677, 2869
MscI TGGCCA 1 cut(s) 450
MslI CAYNNNNRTG 5 cut(s) 120, 1902, 1916, 2109, 2246
Msp20I TGGCCA 1 cut(s) 450
MspCI CTTAAG 2 cut(s) 631, 2311
MspI CCGG 4 cut(s) 51, 193, 1406, 1933
MspR9I CCNGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
MunI CAATTG 2 cut(s) 162, 2652
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
MvnI CGCG 1 cut(s) 1146
NcoI CCATGG 1 cut(s) 2497
NdeI CATATG 2 cut(s) 890, 979
NheI GCTAGC 1 cut(s) 1279
NlaIV GGNNCC 9 cut(s) 49, 197, 489, 744, 904, 1490, 1707, 2486, 2814
NmuCI GTSAC 6 cut(s) 361, 658, 697, 1212, 1909, 2581
NspI RCATGY 2 cut(s) 371, 2180
OliI CACNNNNGTG 1 cut(s) 1916
PaeI GCATGC 1 cut(s) 2180
PagI TCATGA 2 cut(s) 264, 1822
PceI AGGCCT 1 cut(s) 2454
PciSI GCTCTTC 1 cut(s) 2349
PctI GAATGC 1 cut(s) 934
PdmI GAANNNNTTC 3 cut(s) 83, 1677, 2869
PleI GAGTC 6 cut(s) 1759, 1801, 2870, 2902, 2986, 3100
PpsI GAGTC 6 cut(s) 1759, 1801, 2870, 2902, 2986, 3100
PpuMI RGGWCCY 1 cut(s) 2485
PshAI GACNNNNGTC 1 cut(s) 858
PshBI ATTAAT 1 cut(s) 1902
Psp5II RGGWCCY 1 cut(s) 2485
Psp6I CCWGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
PspGI CCWGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
PspN4I GGNNCC 9 cut(s) 49, 197, 489, 744, 904, 1490, 1707, 2486, 2814
PspPI GGNCC 5 cut(s) 997, 1403, 1705, 2485, 3180
PspPPI RGGWCCY 1 cut(s) 2485
PsrI GAACNNNNNNTAC 2 cut(s) 1558, 1590
PstI CTGCAG 1 cut(s) 1009
PstNI CAGNNNCTG 1 cut(s) 2879
PsuI RGATCY 5 cut(s) 902, 1642, 2324, 2425, 2812
RsaI GTAC 4 cut(s) 197, 2092, 2421, 2756
RsaNI GTAC 4 cut(s) 196, 2091, 2420, 2755
RseI CAYNNNNRTG 5 cut(s) 120, 1902, 1916, 2109, 2246
SapI GCTCTTC 1 cut(s) 2349
Sau96I GGNCC 5 cut(s) 997, 1403, 1705, 2485, 3180
ScaI AGTACT 1 cut(s) 2756
SchI GAGTC 6 cut(s) 1760, 1801, 2870, 2903, 2987, 3101
ScrFI CCNGG 9 cut(s) 837, 937, 1496, 1557, 1769, 1803, 1951, 2088, 2903
SduI GDGCHC 4 cut(s) 129, 400, 433, 3154
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 5 cut(s) 397, 943, 1072, 1540, 3177
SfcI CTRYAG 1 cut(s) 1005
SinI GGWCC 4 cut(s) 1403, 1705, 2485, 3180
SmiMI CAYNNNNRTG 5 cut(s) 120, 1902, 1916, 2109, 2246
SmlI CTYRAG 5 cut(s) 631, 668, 992, 2311, 2462
SmoI CTYRAG 5 cut(s) 631, 668, 992, 2311, 2462
SphI GCATGC 1 cut(s) 2180
SseBI AGGCCT 1 cut(s) 2454
SsiI CCGC 9 cut(s) 173, 176, 393, 1144, 1510, 1534, 1676, 2816, 3178
SspI AATATT 1 cut(s) 2170
SspMI CTAG 5 cut(s) 1055, 1280, 1505, 2006, 2373
StuI AGGCCT 1 cut(s) 2454
StyD4I CCNGG 9 cut(s) 835, 935, 1494, 1555, 1767, 1801, 1949, 2086, 2901
StyI CCWWGG 5 cut(s) 316, 437, 1884, 2488, 2497
TaaI ACNGT 4 cut(s) 460, 541, 1291, 1735
TaiI ACGT 1 cut(s) 2408
TaqI TCGA 4 cut(s) 926, 2053, 2691, 3148
TatI WGTACW 1 cut(s) 2754
TauI GCSGC 1 cut(s) 178
TscAI CASTG 7 cut(s) 122, 886, 1048, 1395, 1585, 1842, 2398
TseFI GTSAC 6 cut(s) 361, 658, 697, 1212, 1909, 2581
Tsp45I GTSAC 6 cut(s) 361, 658, 697, 1212, 1909, 2581
TspRI CASTG 7 cut(s) 122, 886, 1048, 1395, 1585, 1842, 2398
Vha464I CTTAAG 2 cut(s) 631, 2311
VpaK11BI GGWCC 4 cut(s) 1403, 1705, 2485, 3180
VspI ATTAAT 1 cut(s) 1902
XagI CCTNNNNNAGG 1 cut(s) 1560
XapI RAATTY 4 cut(s) 2018, 2396, 2638, 2854
XceI RCATGY 2 cut(s) 371, 2180
XcmI CCANNNNNNNNNTGG 1 cut(s) 343
XmnI GAANNNNTTC 3 cut(s) 83, 1677, 2869
XspI CTAG 5 cut(s) 1055, 1280, 1505, 2006, 2373
ZrmI AGTACT 1 cut(s) 2756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.