Rmu_sc0000449.1_g000044

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000449.1
OG0001181
Physical Location & Seq
Reverse (-)
177404 .. 181668
4265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000449.1_g000044.1.cds

Sequence Viewer

Length: 2049 bp
atgtcgactgctcatcggcggttgatggtggcctctttcgactggtcattgaagaaagctttgacgcggatcgaccttatccacggtgagaaggagaacgagggcagcacccgacgtgctgaggaggcgcgcgaggttatgcggtggggactgagagtcctaatcgtggacgacggcgatgacggaagtaatcggacttggaggtcgcagaggaccgtcataatgtaccgacaggggactgagttctttatggttgatcctcctctaaatactaactacaaacgtcctactcgcgtgactcctattatggacacggcagcgcgtattgctcagatgtccaccacgcatgggagaatttttggtgagagattgaagtccctttattcgcattggaacaaacaccgatctgatatgtggggttgttccgatgttatcgcaattggaaaactaccagcgtcaaaggatccgcagtaccgcaagtctacggcattgaatgtttggctggtgggttttgagtttccagagacaatgatggtgttcactaagaaaagaattcatttcttctgcaaccagggtgactctttcaatcctgctcttctcaggatgcctgcaatgaaggctgtgggtgtagacattgtgaggcatgtgatacgagacgttgatgtctactctgctctgatggataatttattgcgtgacatttgcgctcaagcaaaggccgatggccatgaaattcctgttgtgggacacatacgaggggaggctcctgagggatttctttttgaatcttggtctgaaaagctgaagaatgccaattttcggatgagtgatgtgactaatgggttgtctgacttgttgtctgtcaaagacaatgaggagcttgtgaatgtgaagagagctgctttcttgactactaaggtcatgaataatattgtggttccaaatcttgagtttgttattaatcacagtgagaaggtaacacgttcttttttgatggatgagatggtgaaggctatacaggaaccctctaaagcttttgcgaagctgattaatgtagaaaacgttggtatctgttaccctcctattcttcagagtggtgttggtggcaatgatgagttactttcatatgattctgctagtgtggttatatgtgcttttggatcccgttataagagttactgctcaaatgtagccaggacatttttggttgatcccaatccctttcagagaaaggcacatgaaattcttctcaaggcccatgatgcagccattagtgagttgaggcccgggaacaaagctagttctgcatatcaagcagctcgttctgtcgtggagaaggaggctcctgagttagtacctaatctgacagaatctgctgggacaggcattggtattgagcttgttgagtcccggttgaaacttaatgcgaacaatgaccttgtgctgaaagcaggaatggtgttcaatgtgtcacttggttttgaggacttgcagtgtcagagtggtcttactaattcaaaggacaatagcttctctttgttgctagctgatactgttgttattaacaatgtcaagccagaggtcttgacagtcgaaagtgctaaagctattaaggttcctagtaaaatgaaacaagatgctaatggaacagaagatctgcggtccagcaaaaggatgaggttcaagcttgactggaatgatgagcttgacgggaacgatgagcccactttctccgttgtgtccactcagccttccactttttccctgggtgttccattgctttggtcacattcgggtctgctaacagagcgtacagttccagtgtcgcagacagaaagacctccatggcagacagaaagagcttcatatggtataccttcatggaagagagaaagatcatcatggaagagagaaagaccgtcttcattcgttacacctccatgggtagcaaaacctgcattaggcacacttgactggaagacagagagacctgttacacctccaaggcagaaacaaggtgcatttggttatgcttattgtttcttttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

682

Amino Acids

76.62

Weight (kDa)

8.85

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
AasI GACNNNNNNGTC 2 cut(s) 202, 662
Acc36I ACCTGC 1 cut(s) 1963
AccI GTMKAC 5 cut(s) 5, 482, 630, 666, 1873
AccII CGCG 5 cut(s) 67, 130, 132, 294, 322
AciI CCGC 6 cut(s) 19, 67, 142, 467, 475, 1660
AclI AACGTT 1 cut(s) 1062
AclWI GGATC 7 cut(s) 77, 251, 458, 471, 1155, 1168, 1205
AcoI YGGCCR 1 cut(s) 724
AcsI RAATTY 4 cut(s) 354, 552, 732, 1242
AcuI CTGAAG 2 cut(s) 824, 1073
AfaI GTAC 4 cut(s) 227, 473, 1356, 1813
AfiI CCNNNNNNNGG 6 cut(s) 166, 348, 743, 819, 1671, 1961
AflIII ACRYGT 1 cut(s) 980
AgsI TTSAA 9 cut(s) 52, 373, 493, 586, 785, 1417, 1465, 1518, 1684
AhdI GACNNNNNGTC 2 cut(s) 155, 856
AjiI CACGTC 1 cut(s) 116
AjnI CCWGG 3 cut(s) 570, 1193, 1764
Alw26I GTCTC 3 cut(s) 518, 648, 1981
AlwI GGATC 7 cut(s) 77, 251, 458, 471, 1155, 1168, 1205
AlwNI CAGNNNCTG 1 cut(s) 1373
Ama87I CYCGRG 1 cut(s) 1286
AoxI GGCC 5 cut(s) 30, 717, 724, 1254, 1283
ApeKI GCWGC 5 cut(s) 105, 317, 899, 1265, 1316
ApoI RAATTY 4 cut(s) 354, 552, 732, 1242
AseI ATTAAT 2 cut(s) 960, 1050
Asp700I GAANNNNTTC 1 cut(s) 1245
AspLEI GCGC 4 cut(s) 130, 132, 322, 707
AspS9I GGNCC 4 cut(s) 213, 1255, 1284, 1662
AsuC2I CCSGG 3 cut(s) 1287, 1288, 1411
AsuHPI GGTGA 4 cut(s) 98, 374, 587, 1018
AsuNHI GCTAGC 1 cut(s) 1543
AvaI CYCGRG 1 cut(s) 1286
AvaII GGWCC 2 cut(s) 213, 1662
AxyI CCTNAGG 1 cut(s) 768
BaeI ACNNNNGTAYC 4 cut(s) 1051, 1084, 1542, 1575
BalI TGGCCA 1 cut(s) 726
BamHI GGATCC 2 cut(s) 463, 1160
BanII GRGCYC 1 cut(s) 1725
BbsI GAAGAC 2 cut(s) 1914, 1985
BbvCI CCTCAGC 1 cut(s) 120
BbvI GCAGC 5 cut(s) 117, 329, 886, 1277, 1328
BccI CCATC 6 cut(s) 19, 526, 673, 716, 988, 997
BceAI ACGGC 3 cut(s) 190, 330, 501
BciT130I CCWGG 3 cut(s) 572, 1195, 1766
BcnI CCSGG 3 cut(s) 1287, 1288, 1411
BcoDI GTCTC 3 cut(s) 518, 648, 1981
BfaI CTAG 4 cut(s) 1137, 1299, 1544, 1620
BfuAI ACCTGC 1 cut(s) 1963
BglII AGATCT 1 cut(s) 1654
BisI GCNGC 5 cut(s) 106, 318, 900, 1266, 1317
BlsI GCNGC 5 cut(s) 107, 319, 901, 1267, 1318
Bme1390I CCNGG 6 cut(s) 572, 1195, 1287, 1288, 1411, 1766
Bme18I GGWCC 2 cut(s) 213, 1662
BmeRI GACNNNNNGTC 2 cut(s) 155, 856
BmeT110I CYCGRG 1 cut(s) 1286
BmgBI CACGTC 1 cut(s) 116
BmgT120I GGNCC 4 cut(s) 213, 1255, 1284, 1662
BmiI GGNNCC 7 cut(s) 465, 765, 939, 1023, 1162, 1344, 1617
BmrFI CCNGG 6 cut(s) 572, 1195, 1287, 1288, 1411, 1766
BmsI GCATC 3 cut(s) 594, 1252, 1627
BmtI GCTAGC 1 cut(s) 1547
BpiI GAAGAC 2 cut(s) 1914, 1985
Bpu10I CCTNAGC 1 cut(s) 120
BpuEI CTTGAG 3 cut(s) 693, 968, 1235
BpuMI CCSGG 3 cut(s) 1287, 1288, 1411
BsaBI GATNNNNATC 1 cut(s) 1215
BsaI GGTCTC 1 cut(s) 1981
BsaJI CCNNGG 8 cut(s) 82, 571, 1286, 1764, 1765, 1844, 1940, 2003
Bsc4I CCNNNNNNNGG 6 cut(s) 166, 348, 743, 819, 1671, 1961
Bse1I ACTGG 4 cut(s) 47, 1697, 1820, 1979
Bse21I CCTNAGG 1 cut(s) 768
Bse3DI GCAATG 3 cut(s) 618, 1114, 1775
Bse8I GATNNNNATC 1 cut(s) 1215
BseBI CCWGG 3 cut(s) 572, 1195, 1766
BseDI CCNNGG 8 cut(s) 82, 571, 1286, 1764, 1765, 1844, 1940, 2003
BseGI GGATG 4 cut(s) 609, 828, 1003, 1680
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 6 cut(s) 166, 348, 743, 819, 1671, 1961
BseMI GCAATG 3 cut(s) 618, 1114, 1775
BseMII CTCAG 8 cut(s) 111, 143, 231, 344, 613, 759, 1338, 1760
BseNI ACTGG 4 cut(s) 47, 1697, 1820, 1979
BsePI GCGCGC 1 cut(s) 128
BseRI GAGGAG 3 cut(s) 137, 252, 890
BseXI GCAGC 5 cut(s) 117, 329, 886, 1277, 1328
BseYI CCCAGC 1 cut(s) 1376
Bsh1236I CGCG 5 cut(s) 67, 130, 132, 294, 322
BshFI GGCC 5 cut(s) 32, 719, 726, 1256, 1285
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 2 cut(s) 1287, 1411
BslFI GGGAC 6 cut(s) 162, 250, 361, 759, 1393, 1393
BslI CCNNNNNNNGG 6 cut(s) 166, 348, 743, 819, 1671, 1961
BsmAI GTCTC 3 cut(s) 518, 648, 1981
BsmBI CGTCTC 1 cut(s) 648
BsmFI GGGAC 6 cut(s) 162, 250, 361, 759, 1393, 1393
BsmI GAATGC 1 cut(s) 814
BsnI GGCC 5 cut(s) 32, 719, 726, 1256, 1285
Bso31I GGTCTC 1 cut(s) 1981
BsoBI CYCGRG 1 cut(s) 1286
Bsp1286I GDGCHC 1 cut(s) 1725
Bsp143I GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
Bsp19I CCATGG 2 cut(s) 1844, 1940
BspACI CCGC 6 cut(s) 19, 67, 142, 467, 475, 1660
BspANI GGCC 5 cut(s) 32, 719, 726, 1256, 1285
BspCNI CTCAG 8 cut(s) 112, 144, 232, 343, 612, 760, 1339, 1759
BspFNI CGCG 5 cut(s) 67, 130, 132, 294, 322
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 7 cut(s) 465, 765, 939, 1023, 1162, 1344, 1617
BspMI ACCTGC 1 cut(s) 1963
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 7 cut(s) 77, 251, 458, 471, 1155, 1168, 1205
BspQI GCTCTTC 1 cut(s) 600
BspTNI GGTCTC 1 cut(s) 1981
BsrDI GCAATG 3 cut(s) 618, 1114, 1775
BsrI ACTGG 4 cut(s) 47, 1697, 1820, 1979
BssECI CCNNGG 8 cut(s) 82, 571, 1286, 1764, 1765, 1844, 1940, 2003
BssHII GCGCGC 1 cut(s) 128
BssMI GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
BssNAI GTATAC 1 cut(s) 1874
BssT1I CCWWGG 3 cut(s) 1844, 1940, 2003
Bst1107I GTATAC 1 cut(s) 1874
Bst2UI CCWGG 3 cut(s) 572, 1195, 1766
Bst4CI ACNGT 7 cut(s) 86, 217, 968, 1555, 1591, 1816, 1920
Bst6I CTCTTC 4 cut(s) 600, 887, 1880, 1901
BstAPI GCANNNNNTGC 1 cut(s) 1955
BstC8I GCNNGC 3 cut(s) 130, 609, 1545
BstDSI CCRYGG 3 cut(s) 82, 1844, 1940
BstENI CCTNNNNNAGG 1 cut(s) 1959
BstF5I GGATG 4 cut(s) 609, 828, 1003, 1680
BstFNI CGCG 5 cut(s) 67, 130, 132, 294, 322
BstHHI GCGC 4 cut(s) 130, 132, 322, 707
BstKTI GATC 8 cut(s) 72, 259, 407, 466, 1163, 1213, 1657, 1898
BstMAI GTCTC 3 cut(s) 518, 648, 1981
BstMBI GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
BstMWI GCNNNNNNNGC 8 cut(s) 125, 326, 617, 1262, 1304, 1313, 1807, 1955
BstNI CCWGG 3 cut(s) 572, 1195, 1766
BstNSI RCATGY 1 cut(s) 647
BstSCI CCNGG 6 cut(s) 570, 1193, 1285, 1286, 1409, 1764
BstUI CGCG 5 cut(s) 67, 130, 132, 294, 322
BstV1I GCAGC 5 cut(s) 117, 329, 886, 1277, 1328
BstV2I GAAGAC 2 cut(s) 1914, 1985
BstX2I RGATCY 3 cut(s) 463, 1160, 1654
BstXI CCANNNNNNTGG 1 cut(s) 1782
BstYI RGATCY 3 cut(s) 463, 1160, 1654
BstZ17I GTATAC 1 cut(s) 1874
Bsu36I CCTNAGG 1 cut(s) 768
BsuRI GGCC 5 cut(s) 32, 719, 726, 1256, 1285
BtgI CCRYGG 3 cut(s) 82, 1844, 1940
BtgZI GCGATG 1 cut(s) 192
BtrI CACGTC 1 cut(s) 116
BtsCI GGATG 4 cut(s) 609, 828, 1003, 1680
BtsI GCAGTG 1 cut(s) 1499
BtsIMutI CAGTG 3 cut(s) 973, 1499, 1827
BveI ACCTGC 1 cut(s) 1963
Cac8I GCNNGC 3 cut(s) 130, 609, 1545
CaiI CAGNNNCTG 1 cut(s) 1373
CciI TCATGA 1 cut(s) 921
CfoI GCGC 4 cut(s) 130, 132, 322, 707
Cfr13I GGNCC 4 cut(s) 213, 1255, 1284, 1662
Cfr9I CCCGGG 1 cut(s) 1286
CseI GACGC 2 cut(s) 73, 444
Csp6I GTAC 4 cut(s) 226, 472, 1355, 1812
CviQI GTAC 4 cut(s) 226, 472, 1355, 1812
DpnI GATC 8 cut(s) 71, 258, 406, 465, 1162, 1212, 1656, 1897
DpnII GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
DrdI GACNNNNNNGTC 2 cut(s) 202, 662
DriI GACNNNNNGTC 2 cut(s) 155, 856
DseDI GACNNNNNNGTC 2 cut(s) 202, 662
EaeI YGGCCR 1 cut(s) 724
Eam1104I CTCTTC 4 cut(s) 600, 887, 1880, 1901
Eam1105I GACNNNNNGTC 2 cut(s) 155, 856
EarI CTCTTC 4 cut(s) 600, 887, 1880, 1901
Eco130I CCWWGG 3 cut(s) 1844, 1940, 2003
Eco24I GRGCYC 1 cut(s) 1725
Eco31I GGTCTC 1 cut(s) 1981
Eco47I GGWCC 2 cut(s) 213, 1662
Eco57I CTGAAG 2 cut(s) 824, 1073
Eco81I CCTNAGG 1 cut(s) 768
Eco88I CYCGRG 1 cut(s) 1286
EcoNI CCTNNNNNAGG 1 cut(s) 1959
EcoRI GAATTC 1 cut(s) 552
EcoRII CCWGG 3 cut(s) 570, 1193, 1764
EcoT14I CCWWGG 3 cut(s) 1844, 1940, 2003
EcoT38I GRGCYC 1 cut(s) 1725
ErhI CCWWGG 3 cut(s) 1844, 1940, 2003
Esp3I CGTCTC 1 cut(s) 648
FalI AAGNNNNNCTT 2 cut(s) 1906, 1938
FaqI GGGAC 6 cut(s) 162, 250, 361, 759, 1393, 1393
FauNDI CATATG 2 cut(s) 1126, 1867
FblI GTMKAC 5 cut(s) 5, 482, 630, 666, 1873
Fnu4HI GCNGC 5 cut(s) 106, 318, 900, 1266, 1317
FokI GGATG 4 cut(s) 616, 835, 1010, 1687
FriOI GRGCYC 1 cut(s) 1725
Fsp4HI GCNGC 5 cut(s) 106, 318, 900, 1266, 1317
FspBI CTAG 4 cut(s) 1137, 1299, 1544, 1620
GlaI GCGC 4 cut(s) 129, 131, 321, 706
GluI GCNGC 5 cut(s) 106, 318, 900, 1266, 1317
GsaI CCCAGC 1 cut(s) 1380
HaeIII GGCC 5 cut(s) 32, 719, 726, 1256, 1285
HapII CCGG 2 cut(s) 1287, 1411
HgaI GACGC 2 cut(s) 73, 444
HhaI GCGC 4 cut(s) 130, 132, 322, 707
Hin6I GCGC 4 cut(s) 128, 130, 320, 705
HinP1I GCGC 4 cut(s) 128, 130, 320, 705
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 3 cut(s) 57, 1032, 1685
HinfI GANTC 7 cut(s) 156, 298, 578, 785, 1130, 1370, 1406
HpaII CCGG 2 cut(s) 1287, 1411
HphI GGTGA 4 cut(s) 98, 374, 587, 1018
Hpy166II GTNNAC 9 cut(s) 6, 169, 339, 483, 540, 631, 667, 1743, 1874
Hpy188III TCNNGA 8 cut(s) 521, 601, 767, 907, 922, 947, 1346, 1585
Hpy8I GTNNAC 9 cut(s) 6, 169, 339, 483, 540, 631, 667, 1743, 1874
Hpy99I CGWCG 2 cut(s) 117, 176
HpyAV CCTTC 7 cut(s) 85, 610, 967, 1003, 1330, 1761, 1887
HpyCH4III ACNGT 7 cut(s) 86, 217, 968, 1555, 1591, 1816, 1920
HpyCH4IV ACGT 5 cut(s) 115, 283, 657, 982, 1062
HpyCH4V TGCA 7 cut(s) 567, 611, 1265, 1307, 1492, 1958, 2021
HpyF10VI GCNNNNNNNGC 8 cut(s) 125, 326, 617, 1262, 1304, 1313, 1807, 1955
HpySE526I ACGT 5 cut(s) 115, 283, 657, 982, 1062
HspAI GCGC 4 cut(s) 128, 130, 320, 705
Kzo9I GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 3 cut(s) 769, 877, 1348
Lsp1109I GCAGC 5 cut(s) 117, 329, 886, 1277, 1328
LweI GCATC 3 cut(s) 594, 1252, 1627
MaeI CTAG 4 cut(s) 1137, 1299, 1544, 1620
MaeII ACGT 5 cut(s) 115, 283, 657, 982, 1062
MalI GATC 8 cut(s) 71, 258, 406, 465, 1162, 1212, 1656, 1897
MboI GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
MfeI CAATTG 1 cut(s) 438
MflI RGATCY 3 cut(s) 463, 1160, 1654
MhlI GDGCHC 1 cut(s) 1725
MlsI TGGCCA 1 cut(s) 726
MluCI AATT 8 cut(s) 354, 438, 552, 685, 732, 814, 1242, 1513
MluNI TGGCCA 1 cut(s) 726
MlyI GAGTC 4 cut(s) 165, 292, 572, 1415
Mox20I TGGCCA 1 cut(s) 726
MroXI GAANNNNTTC 1 cut(s) 1245
MscI TGGCCA 1 cut(s) 726
MseI TTAA 6 cut(s) 960, 1050, 1422, 1563, 1611, 2047
MslI CAYNNNNRTG 1 cut(s) 1939
Msp20I TGGCCA 1 cut(s) 726
MspI CCGG 2 cut(s) 1287, 1411
MspR9I CCNGG 6 cut(s) 572, 1195, 1287, 1288, 1411, 1766
MunI CAATTG 1 cut(s) 438
Mva1269I GAATGC 1 cut(s) 814
MvaI CCWGG 3 cut(s) 572, 1195, 1766
MvnI CGCG 5 cut(s) 67, 130, 132, 294, 322
MwoI GCNNNNNNNGC 8 cut(s) 125, 326, 617, 1262, 1304, 1313, 1807, 1955
NciI CCSGG 3 cut(s) 1287, 1288, 1411
NcoI CCATGG 2 cut(s) 1844, 1940
NdeI CATATG 2 cut(s) 1126, 1867
NdeII GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
NheI GCTAGC 1 cut(s) 1543
NlaIV GGNNCC 7 cut(s) 465, 765, 939, 1023, 1162, 1344, 1617
NmuCI GTSAC 6 cut(s) 295, 575, 695, 832, 1470, 1785
NspI RCATGY 1 cut(s) 647
PagI TCATGA 1 cut(s) 921
PasI CCCWGGG 1 cut(s) 1765
PauI GCGCGC 1 cut(s) 128
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 814
PdmI GAANNNNTTC 1 cut(s) 1245
PfeI GAWTC 3 cut(s) 785, 1130, 1370
PkrI GCNGC 5 cut(s) 107, 319, 901, 1267, 1318
PleI GAGTC 4 cut(s) 164, 292, 572, 1414
PpsI GAGTC 4 cut(s) 164, 292, 572, 1414
PshBI ATTAAT 2 cut(s) 960, 1050
PsiI TTATAA 1 cut(s) 1170
Psp1406I AACGTT 1 cut(s) 1062
Psp6I CCWGG 3 cut(s) 570, 1193, 1764
PspFI CCCAGC 1 cut(s) 1376
PspGI CCWGG 3 cut(s) 570, 1193, 1764
PspN4I GGNNCC 7 cut(s) 465, 765, 939, 1023, 1162, 1344, 1617
PspPI GGNCC 4 cut(s) 213, 1255, 1284, 1662
PstNI CAGNNNCTG 1 cut(s) 1373
PsuI RGATCY 3 cut(s) 463, 1160, 1654
PteI GCGCGC 1 cut(s) 128
RsaI GTAC 4 cut(s) 227, 473, 1356, 1813
RsaNI GTAC 4 cut(s) 226, 472, 1355, 1812
RseI CAYNNNNRTG 1 cut(s) 1939
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 6 cut(s) 960, 1050, 1422, 1563, 1611, 2047
SatI GCNGC 5 cut(s) 106, 318, 900, 1266, 1317
Sau3AI GATC 8 cut(s) 69, 256, 404, 463, 1160, 1210, 1654, 1895
Sau96I GGNCC 4 cut(s) 213, 1255, 1284, 1662
SchI GAGTC 4 cut(s) 165, 292, 572, 1415
ScrFI CCNGG 6 cut(s) 572, 1195, 1287, 1288, 1411, 1766
SduI GDGCHC 1 cut(s) 1725
SfaNI GCATC 3 cut(s) 594, 1252, 1627
SinI GGWCC 2 cut(s) 213, 1662
SmaI CCCGGG 1 cut(s) 1288
SmiMI CAYNNNNRTG 1 cut(s) 1939
SmlI CTYRAG 3 cut(s) 708, 947, 1250
SmoI CTYRAG 3 cut(s) 708, 947, 1250
Sse9I AATT 8 cut(s) 354, 438, 552, 685, 732, 814, 1242, 1513
SsiI CCGC 6 cut(s) 19, 67, 142, 467, 475, 1660
SspI AATATT 1 cut(s) 931
SspMI CTAG 4 cut(s) 1137, 1299, 1544, 1620
StyD4I CCNGG 6 cut(s) 570, 1193, 1285, 1286, 1409, 1764
StyI CCWWGG 3 cut(s) 1844, 1940, 2003
TaaI ACNGT 7 cut(s) 86, 217, 968, 1555, 1591, 1816, 1920
TaiI ACGT 5 cut(s) 118, 286, 660, 985, 1065
TaqI TCGA 4 cut(s) 5, 39, 72, 1593
TasI AATT 8 cut(s) 354, 438, 552, 685, 732, 814, 1242, 1513
TfiI GAWTC 3 cut(s) 785, 1130, 1370
Tru1I TTAA 6 cut(s) 960, 1050, 1422, 1563, 1611, 2047
Tru9I TTAA 6 cut(s) 960, 1050, 1422, 1563, 1611, 2047
TscAI CASTG 3 cut(s) 973, 1499, 1827
TseFI GTSAC 6 cut(s) 295, 575, 695, 832, 1470, 1785
TseI GCWGC 5 cut(s) 105, 317, 899, 1265, 1316
Tsp45I GTSAC 6 cut(s) 295, 575, 695, 832, 1470, 1785
TspGWI ACGGA 2 cut(s) 198, 1723
TspMI CCCGGG 1 cut(s) 1286
TspRI CASTG 3 cut(s) 973, 1499, 1827
VpaK11BI GGWCC 2 cut(s) 213, 1662
VspI ATTAAT 2 cut(s) 960, 1050
XagI CCTNNNNNAGG 1 cut(s) 1959
XapI RAATTY 4 cut(s) 354, 552, 732, 1242
XceI RCATGY 1 cut(s) 647
XcmI CCANNNNNNNNNTGG 2 cut(s) 1201, 1762
XmaI CCCGGG 1 cut(s) 1286
XmiI GTMKAC 5 cut(s) 5, 482, 630, 666, 1873
XmnI GAANNNNTTC 1 cut(s) 1245
XspI CTAG 4 cut(s) 1137, 1299, 1544, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.