Rh3CG089300

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0001181
Physical Location & Seq
Reverse (-)
6911747 .. 6916077
4331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG089300.1

Sequence Viewer

Length: 3204 bp
ATGGCTGATAATCGAAATGGAAATAGTAAACCTTCAAAGGCAGCCGGAGCAGGAAATAATCCCTATTCCATTGATTTGAATGTCTTCAGTCAGAGATTGAAGTCCCTGTATTCGCACTGGAATGAGCAGCCTGAGTTGTGGGATTCTAGTGATGTTATTGCGATTGCAACACCGCCGCAATCAGATGAAATCCGGTACCTTAAGTCTTCAGCATTGCAGATGTGGTTGGTTGGGTATGATGTTCCGGATACGATAATGGTGTTCATGAAGAAGCAGATTCATTTCTTGGGTAGCCAGAAGAAGGTGTCTTTTTTCCAAGGTGTGAAGAAGTCTGCCAAAGAGGCTGTGGGTGTTGATGTTGTGACGCATGTGAAGGCAAAGAGTGATGATGGCAGTGCTCTGATGGATACTATTTTGGGTGTAATTCGTGCCCAACCAAAGGCTGATGGCCGTGATACTGTTGTTGTAGGAAGGATAGCAAGGGAGGATCCTGAGGGGAATCTTTTGAAATTGTGGTTTGAGAAGCTGAAGAGTGCAACTGTTCAGCTTGGTGATGTAACAAATGGGTTGTCTGACTTGTTTGCTGTCAAGGAGAAAGAGGAACTTGGTAATGTCAAGAAAGCCGCTTACTTAAATACTCTTGTTATGCAGAAAATGGTGGCGAAGCTTGAGAGTGTTATTGATGATGAGAAGAAGGTCACTCACTCTTCTTTGATGGATGAGACAGAGAAACTTATACTGGAACCCTCTAAAGTTGGGCTGAAGCTCAATCCTCAGAATGTTGATATCTGTTACCCTCCAATCTTTCAGAGTGGAGGAAAGTATGATCTCAGACCTGGTGCTGCCAGCAATGATGAGCTTCTTTATTATGATTCTGCAAGTGTGATCATATGTGCTATTGGATCCCGTTATCACAATTACTGCTCGAATGCTGCCAGGACTTTTTTGATTGATGCTAATCCCCTTCAGAGTAAGGCATATGAGGTTCTTCTCAAGGCCCATGCTGCAGCCATTAGTGAGTTGAAGCCTGACAATAAAGCCAGTGCTGCATATCTAGCAGCACTGGCTGTTGTAGAGAAGGATGCTCCTGAACTATTATCTAATCTGACAAAATCTACGGGGACAGGCATTGGTATTGAGTTCCGTGAATCTGGGTTGAATCTTAATGCAAAAAATGACCGGGTGGTGAAAGCTGGCATGGTCTTTAATGTGTCACTCGGTTTTCATAACTTGCAGAGTGGTATCAGTGATCCAAAGCACCAGAACTTCTCTTTGTTGCTAGCTGACACTGTTGTTGTCAACAATGACAAACCAGAGGTGCTGACAGTAAAAGTTTCTAAAGCTGTTAAAGATGTGGCATACTCCTTTAATGAAGTTGAAGAAGAAAAGCCTGAGAAAGGAAAAGGTCCGGCTAATGGAACAGAGGCCTTGATATCTAAAACCAATCTGAGGTCAGACAATAATGAGAAATCAAAGGAGGAGCTACGAAGGCATCACCAGGCAGAACTTGCCCGCCAGAAAAATGAAGAAACAGCCCGTAGACTTGCTGGTGATGGACATGGATCAGGTAATAATCGTTCCACTGCAAAGTCTTCATCCGATTTAGTGGCCTACAAGAATGTAAATGATCTCAATCCTAAAAGAGATCTGATGATTCAAGTTGACCAGAATAATGAAGCTGTTCTTTTGCCTATCTATGGGAGCATGGTCCCCTTTCATGTTGCCACCATAAGGACAGTTAGTGTCCACGCGGAGTCAGCCAACACTAATCAGGCTTGTTATATCAGAATCATCTTCAATGTTCCTGGGACTCCTTTTAGTCCTCATGATACAAACTCACTGAAAAACTTGGGTTCTATATATTTAAAGGAAGTTTCATTTCGCTCCAAGGACACAAGGCACATAAATGAAGTTACACAGGTGATCAAAAACCTTCGGAAGCGAGTTGTGTCCAGGGAGAGTGAGAGAGCTGAGAGGGCTACACTTGTTACTCAGGAGAAACTCCAACTAGCTGGTAACAAATTTAAGCCACTGAGATTGAATGACCTCTGGATTCGACCTGTGTTTGGTGGACGTGGCAGAAAGATTCCGGGTACTCTTGAAGCTCATGCAAATGGGTTTCGTTACTCTACCACCAGACAAGATGAGCGCGTGGATGTAATGTATGGAAATATTAAGCATGCTTTTTTCCAGCCAGCAGAGAATGAGATGATTACTCTGCTTCATTTTCATCTTCACAATCACATAATGGTGGGCAACAAGAAAACCAAAGACGTGCAATTCTATGTGGAGGTCATGGATGTAGTTCAGACCTTGGGAAGTAGTAAGAGATCTGCCTACGACCCAGATGAGATTGAAGAAGAGCAACGAGAGAGGGCTAGGAAGAACAAAGTCAACACTGAATTTCGGACCTTTGTGACTCGGGTACAGGATCTTTGGCAGCAGCCCCAGTTTGAAGGCCTTGAACTTATGTTTGATCAGCCTATGAGGGAGCTTGGTTTCCACGGTGTGCCTTATAAATCCTCAGCATATATCGTCCCTACTACAAATTGCCTGGTTGAACTGATTGAAACTCCTTTTCTTGTTGTCACTCTTGGCGAGATTGAAATTGTGAATCTGGAAAGGGTTGGGCTTGGACAAAAGAATTTTGACCTGGCAATTGTGTTCAAGGATTTTAAAAAAGATGTTCTTCGGATTGATTCGATCCCATCCACAGCACTTGAAGGTCTCAAGGAATGGCTTGACGACACAGAGATCAAGTACTATGAGAGCAGGATGAATCTGTCGTGGAAACCTATACTGAAGACAATTACTGAGGATCCGCAGAGCTTCCTTGATAATGGAGGTTGGGAGTTTTTGAATTTGGAGGGAACGGATTCAGACTCTGAACAGTCTCAGGAGTCAGACCAGGGTTATGAACCATCTGATATGGAATCCGAATCAGAATCGGAGGATGAATCTTCTGGTAGTGCGTCACTTGTGGAGTCTGAGGATGATGAGGAGGAAGATTCAGAAGAAGTCTCGGAGGATGAGGAGGGGAAGACATGGGAAGAGTTGGAGAGGGAAGCAAGCAATGCAGACAGGGAGAAAGGCAACGAGTCGGACAGCGAGGAGGACAGGAAGAGAAGGAAGATGAAAGCTTTTGGCAAGGCTCGAGCCCCGCCTGCTGGTAGCATCCCAAAGCGGTCCAAGCTGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

1067

Amino Acids

119.49

Weight (kDa)

5.62

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FACT-Spt16_Nlob PF14826 24 - 188 2.6e-41 FACT complex subunit SPT16 N-terminal lobe domain
Peptidase_M24 PF00557 205 - 434 3.5e-29 Metallopeptidase family M24
SPT16 PF08644 552 - 668 5.3e-35 FACT complex subunit (SPT16/CDC68)
PH_SPT16 PF24824 679 - 809 7.9e-55 FACT complex subunit SPT16 PH-like domain
Rttp106-like_middle PF08512 836 - 923 3.5e-22 Histone chaperone Rttp106-like, middle domain
SPT16_C PF21091 963 - 1044 7.7e-17 FACT complex subunit SPT16, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2517
Acc65I GGTACC 1 cut(s) 195
AccB1I GGYRCC 1 cut(s) 195
AccI GTMKAC 1 cut(s) 1540
AccII CGCG 2 cut(s) 1751, 2151
AccIII TCCGGA 1 cut(s) 244
AciI CCGC 8 cut(s) 173, 176, 624, 1513, 1751, 2822, 3161, 3184
AcoI YGGCCR 1 cut(s) 448
AcsI RAATTY 4 cut(s) 2021, 2402, 2644, 2860
AcuI CTGAAG 6 cut(s) 70, 192, 548, 782, 950, 2822
AdeI CACNNNGTG 1 cut(s) 2509
AfaI GTAC 4 cut(s) 197, 2095, 2427, 2762
AflII CTTAAG 1 cut(s) 200
AjiI CACGTC 2 cut(s) 2075, 2275
AjnI CCWGG 8 cut(s) 835, 935, 1497, 1804, 1952, 2553, 2652, 2907
Alw21I GWGCWC 1 cut(s) 400
Alw26I GTCTC 4 cut(s) 716, 2732, 2898, 3025
AlwNI CAGNNNCTG 1 cut(s) 2885
Ama87I CYCGRG 2 cut(s) 2421, 3153
Aor13HI TCCGGA 1 cut(s) 244
AoxI GGCC 5 cut(s) 448, 996, 1425, 1608, 2458
ApoI RAATTY 4 cut(s) 2021, 2402, 2644, 2860
ArsI GACNNNNNNTTYG 2 cut(s) 554, 586
Asp700I GAANNNNTTC 3 cut(s) 83, 1680, 2875
Asp718I GGTACC 1 cut(s) 195
AspLEI GCGC 1 cut(s) 2151
AspS9I GGNCC 5 cut(s) 997, 1406, 1708, 2409, 3186
AsuC2I CCSGG 2 cut(s) 1181, 2091
AsuHPI GGTGA 5 cut(s) 563, 1198, 1487, 1562, 1933
AsuNHI GCTAGC 1 cut(s) 1279
AvaI CYCGRG 2 cut(s) 2421, 3153
AvaII GGWCC 4 cut(s) 1406, 1708, 2409, 3186
AxyI CCTNAGG 1 cut(s) 492
BaeGI GKGCMC 1 cut(s) 433
BaeI ACNNNNGTAYC 2 cut(s) 447, 480
BamHI GGATCC 3 cut(s) 487, 902, 2818
BanI GGYRCC 1 cut(s) 195
BanII GRGCYC 1 cut(s) 3160
BbsI GAAGAC 5 cut(s) 76, 198, 1584, 2810, 3047
Bbv12I GWGCWC 1 cut(s) 400
BbvCI CCTCAGC 2 cut(s) 2524, 3194
BccI CCATC 7 cut(s) 383, 397, 440, 709, 1547, 2716, 2929
BceAI ACGGC 1 cut(s) 435
BciT130I CCWGG 8 cut(s) 837, 937, 1499, 1806, 1954, 2555, 2654, 2909
BciVI GTATCC 2 cut(s) 241, 400
BclI TGATCA 3 cut(s) 885, 1923, 2476
BcnI CCSGG 2 cut(s) 1181, 2091
BcoDI GTCTC 4 cut(s) 716, 2732, 2898, 3025
BfaI CTAG 5 cut(s) 147, 1055, 1280, 2009, 2379
BfmI CTRYAG 1 cut(s) 1005
BfrI CTTAAG 1 cut(s) 200
BfuI GTATCC 2 cut(s) 241, 400
BglI GCCNNNNNGGC 1 cut(s) 341
BglII AGATCT 2 cut(s) 1645, 2330
BmcAI AGTACT 1 cut(s) 2762
Bme18I GGWCC 4 cut(s) 1406, 1708, 2409, 3186
BmeT110I CYCGRG 2 cut(s) 2421, 3153
BmgBI CACGTC 2 cut(s) 2075, 2275
BmgT120I GGNCC 5 cut(s) 997, 1406, 1708, 2409, 3186
BmiI GGNNCC 6 cut(s) 197, 489, 744, 904, 1710, 2820
BmrI ACTGGG 1 cut(s) 2443
BmsI GCATC 4 cut(s) 943, 1072, 1501, 3183
BmtI GCTAGC 1 cut(s) 1283
BmuI ACTGGG 1 cut(s) 2443
BpiI GAAGAC 5 cut(s) 76, 198, 1584, 2810, 3047
Bpu10I CCTNAGC 2 cut(s) 2524, 3194
BpuEI CTTGAG 3 cut(s) 689, 977, 2714
BpuMI CCSGG 2 cut(s) 1181, 2091
BsaBI GATNNNNATC 2 cut(s) 957, 1632
BsaI GGTCTC 1 cut(s) 2732
BsaJI CCNNGG 7 cut(s) 316, 1805, 1887, 1953, 2313, 2503, 2908
BsaWI WCCGGW 2 cut(s) 192, 244
Bse1I ACTGG 5 cut(s) 122, 744, 1041, 1068, 2449
Bse21I CCTNAGG 1 cut(s) 492
Bse3DI GCAATG 3 cut(s) 212, 856, 3079
Bse8I GATNNNNATC 2 cut(s) 957, 1632
BseAI TCCGGA 1 cut(s) 244
BseBI CCWGG 8 cut(s) 837, 937, 1499, 1806, 1954, 2555, 2654, 2909
BseDI CCNNGG 7 cut(s) 316, 1805, 1887, 1953, 2313, 2503, 2908
BseJI GATNNNNATC 2 cut(s) 957, 1632
BseMI GCAATG 3 cut(s) 212, 856, 3079
BseNI ACTGG 5 cut(s) 122, 744, 1041, 1068, 2449
BseRI GAGGAG 4 cut(s) 1493, 3014, 3047, 3125
BseSI GKGCMC 1 cut(s) 433
Bsh1236I CGCG 2 cut(s) 1751, 2151
BshFI GGCC 5 cut(s) 450, 998, 1427, 1610, 2460
BshNI GGYRCC 1 cut(s) 195
BsiHKAI GWGCWC 1 cut(s) 400
BsiHKCI CYCGRG 2 cut(s) 2421, 3153
BsiSI CCGG 6 cut(s) 45, 193, 245, 1180, 1409, 2090
BslFI GGGAC 5 cut(s) 88, 1135, 1694, 1822, 2522
BsmAI GTCTC 4 cut(s) 716, 2732, 2898, 3025
BsmFI GGGAC 5 cut(s) 88, 1135, 1694, 1822, 2522
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 5 cut(s) 450, 998, 1427, 1610, 2460
Bso31I GGTCTC 1 cut(s) 2732
BsoBI CYCGRG 2 cut(s) 2421, 3153
Bsp1286I GDGCHC 3 cut(s) 400, 433, 3160
Bsp13I TCCGGA 1 cut(s) 244
BspACI CCGC 8 cut(s) 173, 176, 624, 1513, 1751, 2822, 3161, 3184
BspANI GGCC 5 cut(s) 450, 998, 1427, 1610, 2460
BspEI TCCGGA 1 cut(s) 244
BspFNI CGCG 2 cut(s) 1751, 2151
BspHI TCATGA 2 cut(s) 264, 1825
BspLI GGNNCC 6 cut(s) 197, 489, 744, 904, 1710, 2820
BspMAI CTGCAG 1 cut(s) 1009
BspOI GCTAGC 1 cut(s) 1283
BspQI GCTCTTC 1 cut(s) 2355
BspT107I GGYRCC 1 cut(s) 195
BspTI CTTAAG 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 2732
BsrDI GCAATG 3 cut(s) 212, 856, 3079
BsrI ACTGG 5 cut(s) 122, 744, 1041, 1068, 2449
BssECI CCNNGG 7 cut(s) 316, 1805, 1887, 1953, 2313, 2503, 2908
BssT1I CCWWGG 3 cut(s) 316, 1887, 2313
Bst2UI CCWGG 8 cut(s) 837, 937, 1499, 1806, 1954, 2555, 2654, 2909
Bst4CI ACNGT 7 cut(s) 460, 541, 1291, 1327, 1738, 2507, 2892
Bst6I CTCTTC 5 cut(s) 524, 712, 2355, 3045, 3116
BstAFI CTTAAG 1 cut(s) 200
BstAPI GCANNNNNTGC 2 cut(s) 1508, 3074
BstC8I GCNNGC 8 cut(s) 847, 1195, 1281, 1513, 2181, 2196, 3070, 3165
BstDSI CCRYGG 1 cut(s) 2503
BstENI CCTNNNNNAGG 1 cut(s) 1395
BstFNI CGCG 2 cut(s) 1751, 2151
BstHHI GCGC 1 cut(s) 2151
BstMAI GTCTC 4 cut(s) 716, 2732, 2898, 3025
BstNI CCWGG 8 cut(s) 837, 937, 1499, 1806, 1954, 2555, 2654, 2909
BstNSI RCATGY 2 cut(s) 371, 2183
BstSFI CTRYAG 1 cut(s) 1005
BstSLI GKGCMC 1 cut(s) 433
BstUI CGCG 2 cut(s) 1751, 2151
BstV2I GAAGAC 5 cut(s) 76, 198, 1584, 2810, 3047
BstX2I RGATCY 6 cut(s) 487, 902, 1645, 2330, 2431, 2818
BstXI CCANNNNNNTGG 1 cut(s) 2012
BstYI RGATCY 6 cut(s) 487, 902, 1645, 2330, 2431, 2818
Bsu36I CCTNAGG 1 cut(s) 492
BsuI GTATCC 2 cut(s) 241, 400
BsuRI GGCC 5 cut(s) 450, 998, 1427, 1610, 2460
BtgI CCRYGG 1 cut(s) 2503
BtrI CACGTC 2 cut(s) 2075, 2275
BtsI GCAGTG 2 cut(s) 400, 1581
Cac8I GCNNGC 8 cut(s) 847, 1195, 1281, 1513, 2181, 2196, 3070, 3165
CaiI CAGNNNCTG 1 cut(s) 2885
CciI TCATGA 2 cut(s) 264, 1825
CfoI GCGC 1 cut(s) 2151
Cfr13I GGNCC 5 cut(s) 997, 1406, 1708, 2409, 3186
CseI GACGC 2 cut(s) 373, 2961
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 4 cut(s) 196, 2094, 2426, 2761
CspCI CAANNNNNGTGG 4 cut(s) 2019, 2054, 2701, 2736
CviQI GTAC 4 cut(s) 196, 2094, 2426, 2761
DraI TTTAAA 2 cut(s) 1866, 2677
DraIII CACNNNGTG 1 cut(s) 2509
EaeI YGGCCR 1 cut(s) 448
Eam1104I CTCTTC 5 cut(s) 524, 712, 2355, 3045, 3116
EarI CTCTTC 5 cut(s) 524, 712, 2355, 3045, 3116
Eco130I CCWWGG 3 cut(s) 316, 1887, 2313
Eco147I AGGCCT 2 cut(s) 1427, 2460
Eco24I GRGCYC 1 cut(s) 3160
Eco31I GGTCTC 1 cut(s) 2732
Eco32I GATATC 2 cut(s) 787, 1434
Eco47I GGWCC 4 cut(s) 1406, 1708, 2409, 3186
Eco57I CTGAAG 6 cut(s) 70, 192, 548, 782, 950, 2822
Eco81I CCTNAGG 1 cut(s) 492
Eco88I CYCGRG 2 cut(s) 2421, 3153
EcoNI CCTNNNNNAGG 1 cut(s) 1395
EcoRII CCWGG 8 cut(s) 835, 935, 1497, 1804, 1952, 2553, 2652, 2907
EcoRV GATATC 2 cut(s) 787, 1434
EcoT14I CCWWGG 3 cut(s) 316, 1887, 2313
EcoT38I GRGCYC 1 cut(s) 3160
ErhI CCWWGG 3 cut(s) 316, 1887, 2313
FalI AAGNNNNNCTT 6 cut(s) 588, 620, 1668, 1700, 2673, 2705
FaqI GGGAC 5 cut(s) 88, 1135, 1694, 1822, 2522
FauI CCCGC 2 cut(s) 1520, 3168
FauNDI CATATG 2 cut(s) 890, 979
FbaI TGATCA 3 cut(s) 885, 1923, 2476
FblI GTMKAC 1 cut(s) 1540
FriOI GRGCYC 1 cut(s) 3160
FspBI CTAG 5 cut(s) 147, 1055, 1280, 2009, 2379
GlaI GCGC 1 cut(s) 2150
HaeIII GGCC 5 cut(s) 450, 998, 1427, 1610, 2460
HapII CCGG 6 cut(s) 45, 193, 245, 1180, 1409, 2090
HgaI GACGC 2 cut(s) 373, 2961
HhaI GCGC 1 cut(s) 2151
Hin6I GCGC 1 cut(s) 2149
HinP1I GCGC 1 cut(s) 2149
HincII GTYRAC 3 cut(s) 1300, 1663, 2395
HindII GTYRAC 3 cut(s) 1300, 1663, 2395
HindIII AAGCTT 2 cut(s) 665, 3138
HpaII CCGG 6 cut(s) 45, 193, 245, 1180, 1409, 2090
HphI GGTGA 5 cut(s) 563, 1198, 1487, 1562, 1933
Hpy166II GTNNAC 7 cut(s) 29, 1300, 1541, 1663, 1747, 2072, 2395
Hpy8I GTNNAC 7 cut(s) 29, 1300, 1541, 1663, 1747, 2072, 2395
HpyCH4III ACNGT 7 cut(s) 460, 541, 1291, 1327, 1738, 2507, 2892
HpyCH4IV ACGT 2 cut(s) 2074, 2274
HpySE526I ACGT 2 cut(s) 2074, 2274
HspAI GCGC 1 cut(s) 2149
Kpn2I TCCGGA 1 cut(s) 244
KpnI GGTACC 1 cut(s) 199
Ksp22I TGATCA 3 cut(s) 885, 1923, 2476
LguI GCTCTTC 1 cut(s) 2355
LmnI GCTCC 6 cut(s) 47, 1090, 1480, 1701, 1889, 2491
LweI GCATC 4 cut(s) 943, 1072, 1501, 3183
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 5 cut(s) 147, 1055, 1280, 2009, 2379
MaeII ACGT 2 cut(s) 2074, 2274
MfeI CAATTG 1 cut(s) 2658
MflI RGATCY 6 cut(s) 487, 902, 1645, 2330, 2431, 2818
MhlI GDGCHC 3 cut(s) 400, 433, 3160
MlyI GAGTC 7 cut(s) 1763, 1804, 2413, 2876, 2909, 2993, 3107
MmeI TCCRAC 3 cut(s) 2029, 3036, 3081
MroI TCCGGA 1 cut(s) 244
MroXI GAANNNNTTC 3 cut(s) 83, 1680, 2875
MslI CAYNNNNRTG 4 cut(s) 120, 1905, 2112, 2249
MspCI CTTAAG 1 cut(s) 200
MspI CCGG 6 cut(s) 45, 193, 245, 1180, 1409, 2090
MunI CAATTG 1 cut(s) 2658
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 8 cut(s) 837, 937, 1499, 1806, 1954, 2555, 2654, 2909
MvnI CGCG 2 cut(s) 1751, 2151
NciI CCSGG 2 cut(s) 1181, 2091
NdeI CATATG 2 cut(s) 890, 979
NheI GCTAGC 1 cut(s) 1279
NlaIV GGNNCC 6 cut(s) 197, 489, 744, 904, 1710, 2820
NmuCI GTSAC 6 cut(s) 361, 697, 1212, 2416, 2587, 2973
NspI RCATGY 2 cut(s) 371, 2183
PaeI GCATGC 1 cut(s) 2183
PaeR7I CTCGAG 1 cut(s) 3153
PagI TCATGA 2 cut(s) 264, 1825
PceI AGGCCT 2 cut(s) 1427, 2460
PciSI GCTCTTC 1 cut(s) 2355
PctI GAATGC 1 cut(s) 934
PdmI GAANNNNTTC 3 cut(s) 83, 1680, 2875
PleI GAGTC 7 cut(s) 1762, 1804, 2413, 2876, 2908, 2992, 3106
PpsI GAGTC 7 cut(s) 1762, 1804, 2413, 2876, 2908, 2992, 3106
PsiI TTATAA 1 cut(s) 2517
Psp6I CCWGG 8 cut(s) 835, 935, 1497, 1804, 1952, 2553, 2652, 2907
PspGI CCWGG 8 cut(s) 835, 935, 1497, 1804, 1952, 2553, 2652, 2907
PspN4I GGNNCC 6 cut(s) 197, 489, 744, 904, 1710, 2820
PspPI GGNCC 5 cut(s) 997, 1406, 1708, 2409, 3186
PspXI VCTCGAGB 1 cut(s) 3153
PsrI GAACNNNNNNTAC 2 cut(s) 1561, 1593
PstI CTGCAG 1 cut(s) 1009
PstNI CAGNNNCTG 1 cut(s) 2885
PsuI RGATCY 6 cut(s) 487, 902, 1645, 2330, 2431, 2818
RsaI GTAC 4 cut(s) 197, 2095, 2427, 2762
RsaNI GTAC 4 cut(s) 196, 2094, 2426, 2761
RseI CAYNNNNRTG 4 cut(s) 120, 1905, 2112, 2249
SapI GCTCTTC 1 cut(s) 2355
Sau96I GGNCC 5 cut(s) 997, 1406, 1708, 2409, 3186
ScaI AGTACT 1 cut(s) 2762
SchI GAGTC 7 cut(s) 1763, 1804, 2413, 2876, 2909, 2993, 3107
SduI GDGCHC 3 cut(s) 400, 433, 3160
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 4 cut(s) 943, 1072, 1501, 3183
SfcI CTRYAG 1 cut(s) 1005
Sfr274I CTCGAG 1 cut(s) 3153
SinI GGWCC 4 cut(s) 1406, 1708, 2409, 3186
SlaI CTCGAG 1 cut(s) 3153
SmiMI CAYNNNNRTG 4 cut(s) 120, 1905, 2112, 2249
SmlI CTYRAG 5 cut(s) 200, 668, 992, 2729, 3153
SmoI CTYRAG 5 cut(s) 200, 668, 992, 2729, 3153
SphI GCATGC 1 cut(s) 2183
SseBI AGGCCT 2 cut(s) 1427, 2460
SsiI CCGC 8 cut(s) 173, 176, 624, 1513, 1751, 2822, 3161, 3184
SspI AATATT 1 cut(s) 2173
SspMI CTAG 5 cut(s) 147, 1055, 1280, 2009, 2379
StuI AGGCCT 2 cut(s) 1427, 2460
StyI CCWWGG 3 cut(s) 316, 1887, 2313
TaaI ACNGT 7 cut(s) 460, 541, 1291, 1327, 1738, 2507, 2892
TaiI ACGT 2 cut(s) 2077, 2277
TaqI TCGA 5 cut(s) 13, 926, 2056, 2702, 3154
TatI WGTACW 1 cut(s) 2760
TauI GCSGC 2 cut(s) 178, 626
TseFI GTSAC 6 cut(s) 361, 697, 1212, 2416, 2587, 2973
Tsp45I GTSAC 6 cut(s) 361, 697, 1212, 2416, 2587, 2973
TspGWI ACGGA 2 cut(s) 1133, 2888
Vha464I CTTAAG 1 cut(s) 200
VpaK11BI GGWCC 4 cut(s) 1406, 1708, 2409, 3186
XagI CCTNNNNNAGG 1 cut(s) 1395
XapI RAATTY 4 cut(s) 2021, 2402, 2644, 2860
XceI RCATGY 2 cut(s) 371, 2183
XcmI CCANNNNNNNNNTGG 1 cut(s) 343
XhoI CTCGAG 1 cut(s) 3153
XmiI GTMKAC 1 cut(s) 1540
XmnI GAANNNNTTC 3 cut(s) 83, 1680, 2875
XspI CTAG 5 cut(s) 147, 1055, 1280, 2009, 2379
ZrmI AGTACT 1 cut(s) 2762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.