Rw3G008330

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0001181
Physical Location & Seq
Forward (+)
7716594 .. 7720817
4224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G008330.1

Sequence Viewer

Length: 1956 bp
ATGTACCGACAGGGGACTGAGTTCTTTATGGTTGATCCTCCTCTAAATAGTAACTACAAACGTCCTACTAGCGTTATGGACACGGCAGCGCGTATTGCTCAGATGTCCACCACGCATAGGAGAATTTTTGGTGAGAGATTGAAGTCCCTTTATTCGCATTGGAACAAACACCGATCTGATATGTGGGGTTGTTCCGATGTTATCGCAATTGGAAAACTACCAGCGTCAAAGGATCCGCAGTACCGCAAGTCTACGGCATTGAATGTTTGGCTGGTGGGTTTTGAGTTTCCAGAGACAATGATGGTGTTCACTAAGAAAAGAATTCATTTCTTCTGCAACCAAGGTGACTCTTTCAATCCTGCTCTTCTCAGGATGCCTGCAATGAAGGCTCTGGGTGTAGACATTGTGAGGCATGTGATACGAGACGTTGATGTCTACTCTGCTCTGATGGATAATTTATTGCGTGACATTTGCGCTCAAGCAAAGGCCGATGGCCATGAAATTCCTGTTGTGGGGCACATAGGAGGGGAGGCTCCTGAGGGATTTCTTTTTGAATCTTGGTCTGAAAAGCTGAAGAATGCCAATTTTCGGATGAGTGATGTGACTAATGGGTTGTCTGTCAAAGACAATGAGGAGCTTGTGAATGTGAAGAGAGCTGCTTTCTTGACTACTAAGGTCATGAATAATATTGTGGTTCCAAATCTTGAGTTTGTTATTAATCACAGTGAGAAGGTAACATGTTCTTTTTTGATGGATGAGATGGTGAAGGCTATACAGGAACCCTCTAAAGCTTTTGCGAAGCTGATTAATGTAGAAAACGTTGGTATCTGTTACCCTCCTATTCTTCAGAGTGGTGTTGGTGGCAATGATGAGTTACTTTCATATGATTCTGCTAGTGTGGTTATATGTGCTTTTGGATCCCGTTATAAGAGTTACTGCTCAAATGTAGCCAGGACATTTTTGGTTGATCCCAATCCCTTTCAGAGAAAGGCACATGAAATTCTTCTCAAGGCCCATGATGCAGCCATTAGTGAGTTGAGGCCCGGGAACAAAGCTAGTTCTGCATATCAAGCAGCTCGTTCTGTCGTGGAGAAGGAGGCTCCTGAGTTAGTACCTAATCTGACAGAATCTGCTGGGACAGGCATTGGTATTGAGCTTGTTGAGTCCCGGTTGAAACTTAATGCGAACAATGACCTTGTGCTGAAAGCAGGAATGGTGTTCAATGTGTCACTTGGTTTTGAGGACTTGCAGAGTCAGAGTGGTCTTACTAATTCAAAGGATCATAGCTTCTCTTTGTTGCTAGCTGATACTGTTGTTATTAACAATGTCAAGCCAGAGGTATTGACAGTCGAAAGTGCTAAAGCTATTAAGGTTCCTAGTAAAATGAAACAAGATGCTAATGGAACAGAAGATCTGCGGTCCAGCAAAAGGATGAGGTTCAAGCTTGACTGGAATGATGAGCTTGACGGGAACGATGAGCCCACTTTCTCTGTTGTGTCGACTCAGCCTTCCACTTTTTCCCTGGGTGTTCCATTGCTTTGGTCACATTCGGGTCTGGCACCTGCTGATGTACGGACTGACCCTCTCAATGCCAGAGAGAGGCTATCATATGCGGAAAGGGGGAAGTCCACAAGTATAAAATCCACAGAGAAAATGGATATGCTAATAGCCAAGTACTATATTGATGACACAAAGGGTCGTGTGCAGCTAACAGAGCGTACAGTTCCAGTGTCGCAGACAGAAACACCTCCATGGCAGACAGAAAGAGCTTCATATGGTATACCTTCATGGAAGAGAGAAAGATCATCATGGAAGAGAGAAAGACCGTCTTCATTCGTTACACCTCCATGGGTAGCAAAACCTGCATTAGGCACACTTGACTGGAAGACAGAGAGACCTGTTACACCTCCAAGGCAGAAACAAGGTGCATTTGGTTATGCTTATTGTTTCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

651

Amino Acids

72.79

Weight (kDa)

8.65

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FACT-Spt16_Nlob PF14826 42 - 203 9.5e-28 FACT complex subunit SPT16 N-terminal lobe domain
Peptidase_M24 PF00557 262 - 440 1.4e-26 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 927
AarI CACCTGC 1 cut(s) 1570
AasI GACNNNNNNGTC 1 cut(s) 431
Acc36I ACCTGC 2 cut(s) 1570, 1870
AccB1I GGYRCC 1 cut(s) 1558
AccI GTMKAC 5 cut(s) 251, 399, 435, 1499, 1780
AccII CGCG 1 cut(s) 91
AciI CCGC 4 cut(s) 236, 244, 1417, 1613
AclI AACGTT 1 cut(s) 819
AclWI GGATC 7 cut(s) 29, 227, 240, 912, 925, 962, 1287
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 4 cut(s) 123, 321, 501, 999
AcuI CTGAAG 2 cut(s) 593, 830
AfaI GTAC 6 cut(s) 5, 242, 1113, 1572, 1676, 1720
AfiI CCNNNNNNNGG 6 cut(s) 117, 512, 588, 1428, 1599, 1868
AflIII ACRYGT 1 cut(s) 737
AgsI TTSAA 8 cut(s) 142, 262, 355, 554, 1174, 1222, 1275, 1441
AjnI CCWGG 2 cut(s) 950, 1521
Alw26I GTCTC 3 cut(s) 287, 417, 1888
AlwI GGATC 7 cut(s) 29, 227, 240, 912, 925, 962, 1287
AlwNI CAGNNNCTG 1 cut(s) 1130
Ama87I CYCGRG 1 cut(s) 1043
AoxI GGCC 4 cut(s) 486, 493, 1011, 1040
ApeKI GCWGC 5 cut(s) 86, 656, 1022, 1073, 1705
ApoI RAATTY 4 cut(s) 123, 321, 501, 999
AseI ATTAAT 2 cut(s) 717, 807
Asp700I GAANNNNTTC 1 cut(s) 1002
AspLEI GCGC 2 cut(s) 91, 476
AspS9I GGNCC 3 cut(s) 1012, 1041, 1419
AsuC2I CCSGG 3 cut(s) 1044, 1045, 1168
AsuHPI GGTGA 3 cut(s) 143, 356, 775
AsuNHI GCTAGC 1 cut(s) 1300
AvaI CYCGRG 1 cut(s) 1043
AvaII GGWCC 1 cut(s) 1419
AxyI CCTNAGG 1 cut(s) 537
BaeGI GKGCMC 1 cut(s) 519
BaeI ACNNNNGTAYC 4 cut(s) 808, 841, 1299, 1332
BalI TGGCCA 1 cut(s) 495
BamHI GGATCC 2 cut(s) 232, 917
BanI GGYRCC 1 cut(s) 1558
BanII GRGCYC 1 cut(s) 1482
BbsI GAAGAC 2 cut(s) 1821, 1892
BbvI GCAGC 5 cut(s) 98, 643, 1034, 1085, 1717
BccI CCATC 5 cut(s) 295, 442, 485, 745, 754
BceAI ACGGC 2 cut(s) 99, 270
BciT130I CCWGG 2 cut(s) 952, 1523
BcnI CCSGG 3 cut(s) 1044, 1045, 1168
BcoDI GTCTC 3 cut(s) 287, 417, 1888
BfaI CTAG 5 cut(s) 69, 894, 1056, 1301, 1377
BfuAI ACCTGC 2 cut(s) 1570, 1870
BglII AGATCT 1 cut(s) 1411
BisI GCNGC 5 cut(s) 87, 657, 1023, 1074, 1706
BlsI GCNGC 5 cut(s) 88, 658, 1024, 1075, 1707
BmcAI AGTACT 1 cut(s) 1676
Bme1390I CCNGG 5 cut(s) 952, 1044, 1045, 1168, 1523
Bme18I GGWCC 1 cut(s) 1419
BmeT110I CYCGRG 1 cut(s) 1043
BmgT120I GGNCC 3 cut(s) 1012, 1041, 1419
BmiI GGNNCC 8 cut(s) 234, 534, 696, 780, 919, 1101, 1374, 1560
BmrFI CCNGG 5 cut(s) 952, 1044, 1045, 1168, 1523
BmsI GCATC 3 cut(s) 363, 1009, 1384
BmtI GCTAGC 1 cut(s) 1304
BpiI GAAGAC 2 cut(s) 1821, 1892
BpuEI CTTGAG 3 cut(s) 462, 725, 992
BpuMI CCSGG 3 cut(s) 1044, 1045, 1168
BsaBI GATNNNNATC 1 cut(s) 972
BsaI GGTCTC 1 cut(s) 1888
BsaJI CCNNGG 7 cut(s) 340, 1043, 1521, 1522, 1751, 1847, 1910
Bsc4I CCNNNNNNNGG 6 cut(s) 117, 512, 588, 1428, 1599, 1868
Bse1I ACTGG 3 cut(s) 1454, 1727, 1886
Bse21I CCTNAGG 1 cut(s) 537
Bse3DI GCAATG 3 cut(s) 387, 871, 1532
Bse8I GATNNNNATC 1 cut(s) 972
BseBI CCWGG 2 cut(s) 952, 1523
BseDI CCNNGG 7 cut(s) 340, 1043, 1521, 1522, 1751, 1847, 1910
BseGI GGATG 4 cut(s) 378, 597, 760, 1437
BseJI GATNNNNATC 1 cut(s) 972
BseLI CCNNNNNNNGG 6 cut(s) 117, 512, 588, 1428, 1599, 1868
BseMI GCAATG 3 cut(s) 387, 871, 1532
BseMII CTCAG 6 cut(s) 9, 113, 382, 528, 1095, 1517
BseNI ACTGG 3 cut(s) 1454, 1727, 1886
BseRI GAGGAG 2 cut(s) 30, 647
BseSI GKGCMC 1 cut(s) 519
BseXI GCAGC 5 cut(s) 98, 643, 1034, 1085, 1717
BseYI CCCAGC 1 cut(s) 1133
BsgI GTGCAG 1 cut(s) 1724
Bsh1236I CGCG 1 cut(s) 91
BshFI GGCC 4 cut(s) 488, 495, 1013, 1042
BshNI GGYRCC 1 cut(s) 1558
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 2 cut(s) 1044, 1168
BslFI GGGAC 4 cut(s) 28, 130, 1150, 1150
BslI CCNNNNNNNGG 6 cut(s) 117, 512, 588, 1428, 1599, 1868
BsmAI GTCTC 3 cut(s) 287, 417, 1888
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 4 cut(s) 28, 130, 1150, 1150
BsmI GAATGC 1 cut(s) 583
BsnI GGCC 4 cut(s) 488, 495, 1013, 1042
Bso31I GGTCTC 1 cut(s) 1888
BsoBI CYCGRG 1 cut(s) 1043
Bsp1286I GDGCHC 2 cut(s) 519, 1482
Bsp143I GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
Bsp19I CCATGG 2 cut(s) 1751, 1847
BspACI CCGC 4 cut(s) 236, 244, 1417, 1613
BspANI GGCC 4 cut(s) 488, 495, 1013, 1042
BspCNI CTCAG 6 cut(s) 10, 112, 381, 529, 1096, 1516
BspFNI CGCG 1 cut(s) 91
BspHI TCATGA 1 cut(s) 678
BspLI GGNNCC 8 cut(s) 234, 534, 696, 780, 919, 1101, 1374, 1560
BspMI ACCTGC 2 cut(s) 1570, 1870
BspOI GCTAGC 1 cut(s) 1304
BspPI GGATC 7 cut(s) 29, 227, 240, 912, 925, 962, 1287
BspQI GCTCTTC 1 cut(s) 369
BspT107I GGYRCC 1 cut(s) 1558
BspTNI GGTCTC 1 cut(s) 1888
BsrDI GCAATG 3 cut(s) 387, 871, 1532
BsrI ACTGG 3 cut(s) 1454, 1727, 1886
BssECI CCNNGG 7 cut(s) 340, 1043, 1521, 1522, 1751, 1847, 1910
BssMI GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
BssNAI GTATAC 1 cut(s) 1781
BssT1I CCWWGG 4 cut(s) 340, 1751, 1847, 1910
Bst1107I GTATAC 1 cut(s) 1781
Bst2UI CCWGG 2 cut(s) 952, 1523
Bst4CI ACNGT 5 cut(s) 725, 1312, 1348, 1723, 1827
Bst6I CTCTTC 4 cut(s) 369, 644, 1787, 1808
BstAPI GCANNNNNTGC 1 cut(s) 1862
BstC8I GCNNGC 2 cut(s) 378, 1302
BstDEI CTNAG 8 cut(s) 18, 99, 312, 368, 537, 672, 1104, 1503
BstDSI CCRYGG 2 cut(s) 1751, 1847
BstENI CCTNNNNNAGG 1 cut(s) 1866
BstF5I GGATG 4 cut(s) 378, 597, 760, 1437
BstFNI CGCG 1 cut(s) 91
BstHHI GCGC 2 cut(s) 91, 476
BstKTI GATC 8 cut(s) 37, 176, 235, 920, 970, 1282, 1414, 1805
BstMAI GTCTC 3 cut(s) 287, 417, 1888
BstMBI GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
BstMWI GCNNNNNNNGC 7 cut(s) 95, 386, 1019, 1061, 1070, 1714, 1862
BstNI CCWGG 2 cut(s) 952, 1523
BstNSI RCATGY 2 cut(s) 416, 741
BstSCI CCNGG 5 cut(s) 950, 1042, 1043, 1166, 1521
BstSLI GKGCMC 1 cut(s) 519
BstUI CGCG 1 cut(s) 91
BstV1I GCAGC 5 cut(s) 98, 643, 1034, 1085, 1717
BstV2I GAAGAC 2 cut(s) 1821, 1892
BstX2I RGATCY 3 cut(s) 232, 917, 1411
BstXI CCANNNNNNTGG 1 cut(s) 1539
BstYI RGATCY 3 cut(s) 232, 917, 1411
BstZ17I GTATAC 1 cut(s) 1781
Bsu36I CCTNAGG 1 cut(s) 537
BsuRI GGCC 4 cut(s) 488, 495, 1013, 1042
BtgI CCRYGG 2 cut(s) 1751, 1847
BtsCI GGATG 4 cut(s) 378, 597, 760, 1437
BtsIMutI CAGTG 2 cut(s) 730, 1734
BveI ACCTGC 2 cut(s) 1570, 1870
Cac8I GCNNGC 2 cut(s) 378, 1302
CaiI CAGNNNCTG 1 cut(s) 1130
CciI TCATGA 1 cut(s) 678
CfoI GCGC 2 cut(s) 91, 476
Cfr13I GGNCC 3 cut(s) 1012, 1041, 1419
Cfr9I CCCGGG 1 cut(s) 1043
CseI GACGC 1 cut(s) 213
Csp6I GTAC 6 cut(s) 4, 241, 1112, 1571, 1675, 1719
CviQI GTAC 6 cut(s) 4, 241, 1112, 1571, 1675, 1719
DdeI CTNAG 8 cut(s) 18, 99, 312, 368, 537, 672, 1104, 1503
DpnI GATC 8 cut(s) 36, 175, 234, 919, 969, 1281, 1413, 1804
DpnII GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
DrdI GACNNNNNNGTC 1 cut(s) 431
DseDI GACNNNNNNGTC 1 cut(s) 431
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 4 cut(s) 369, 644, 1787, 1808
EarI CTCTTC 4 cut(s) 369, 644, 1787, 1808
Eco130I CCWWGG 4 cut(s) 340, 1751, 1847, 1910
Eco24I GRGCYC 1 cut(s) 1482
Eco31I GGTCTC 1 cut(s) 1888
Eco47I GGWCC 1 cut(s) 1419
Eco57I CTGAAG 2 cut(s) 593, 830
Eco81I CCTNAGG 1 cut(s) 537
Eco88I CYCGRG 1 cut(s) 1043
EcoNI CCTNNNNNAGG 1 cut(s) 1866
EcoRI GAATTC 1 cut(s) 321
EcoRII CCWGG 2 cut(s) 950, 1521
EcoT14I CCWWGG 4 cut(s) 340, 1751, 1847, 1910
EcoT38I GRGCYC 1 cut(s) 1482
ErhI CCWWGG 4 cut(s) 340, 1751, 1847, 1910
Esp3I CGTCTC 1 cut(s) 417
FalI AAGNNNNNCTT 2 cut(s) 1813, 1845
FaqI GGGAC 4 cut(s) 28, 130, 1150, 1150
FauNDI CATATG 3 cut(s) 883, 1609, 1774
FblI GTMKAC 5 cut(s) 251, 399, 435, 1499, 1780
Fnu4HI GCNGC 5 cut(s) 87, 657, 1023, 1074, 1706
FokI GGATG 4 cut(s) 385, 604, 767, 1444
FriOI GRGCYC 1 cut(s) 1482
Fsp4HI GCNGC 5 cut(s) 87, 657, 1023, 1074, 1706
FspBI CTAG 5 cut(s) 69, 894, 1056, 1301, 1377
GlaI GCGC 2 cut(s) 90, 475
GluI GCNGC 5 cut(s) 87, 657, 1023, 1074, 1706
GsaI CCCAGC 1 cut(s) 1137
HaeIII GGCC 4 cut(s) 488, 495, 1013, 1042
HapII CCGG 2 cut(s) 1044, 1168
HgaI GACGC 1 cut(s) 213
HhaI GCGC 2 cut(s) 91, 476
Hin6I GCGC 2 cut(s) 89, 474
HinP1I GCGC 2 cut(s) 89, 474
HincII GTYRAC 1 cut(s) 1500
HindII GTYRAC 1 cut(s) 1500
HindIII AAGCTT 2 cut(s) 789, 1442
HinfI GANTC 7 cut(s) 347, 554, 887, 1127, 1163, 1252, 1501
HpaII CCGG 2 cut(s) 1044, 1168
HphI GGTGA 3 cut(s) 143, 356, 775
Hpy166II GTNNAC 8 cut(s) 108, 252, 309, 400, 436, 1500, 1629, 1781
Hpy188III TCNNGA 7 cut(s) 290, 370, 536, 664, 679, 704, 1103
Hpy8I GTNNAC 8 cut(s) 108, 252, 309, 400, 436, 1500, 1629, 1781
HpyAV CCTTC 6 cut(s) 379, 724, 760, 1087, 1518, 1794
HpyCH4III ACNGT 5 cut(s) 725, 1312, 1348, 1723, 1827
HpyCH4IV ACGT 3 cut(s) 61, 426, 819
HpyCH4V TGCA 8 cut(s) 336, 380, 1022, 1064, 1249, 1705, 1865, 1928
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 386, 1019, 1061, 1070, 1714, 1862
HpyF3I CTNAG 8 cut(s) 18, 99, 312, 368, 537, 672, 1104, 1503
HpySE526I ACGT 3 cut(s) 61, 426, 819
HspAI GCGC 2 cut(s) 89, 474
Kzo9I GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
LguI GCTCTTC 1 cut(s) 369
LmnI GCTCC 3 cut(s) 538, 634, 1105
Lsp1109I GCAGC 5 cut(s) 98, 643, 1034, 1085, 1717
LweI GCATC 3 cut(s) 363, 1009, 1384
MaeI CTAG 5 cut(s) 69, 894, 1056, 1301, 1377
MaeII ACGT 3 cut(s) 61, 426, 819
MalI GATC 8 cut(s) 36, 175, 234, 919, 969, 1281, 1413, 1804
MboI GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 3 cut(s) 232, 917, 1411
MhlI GDGCHC 2 cut(s) 519, 1482
MlsI TGGCCA 1 cut(s) 495
MluCI AATT 8 cut(s) 123, 207, 321, 454, 501, 583, 999, 1270
MluNI TGGCCA 1 cut(s) 495
MlyI GAGTC 4 cut(s) 341, 1172, 1261, 1495
Mox20I TGGCCA 1 cut(s) 495
MroXI GAANNNNTTC 1 cut(s) 1002
MscI TGGCCA 1 cut(s) 495
MseI TTAA 6 cut(s) 717, 807, 1179, 1320, 1368, 1954
MslI CAYNNNNRTG 2 cut(s) 1750, 1846
Msp20I TGGCCA 1 cut(s) 495
MspI CCGG 2 cut(s) 1044, 1168
MspR9I CCNGG 5 cut(s) 952, 1044, 1045, 1168, 1523
MunI CAATTG 1 cut(s) 207
Mva1269I GAATGC 1 cut(s) 583
MvaI CCWGG 2 cut(s) 952, 1523
MvnI CGCG 1 cut(s) 91
MwoI GCNNNNNNNGC 7 cut(s) 95, 386, 1019, 1061, 1070, 1714, 1862
NciI CCSGG 3 cut(s) 1044, 1045, 1168
NcoI CCATGG 2 cut(s) 1751, 1847
NdeI CATATG 3 cut(s) 883, 1609, 1774
NdeII GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
NheI GCTAGC 1 cut(s) 1300
NlaIV GGNNCC 8 cut(s) 234, 534, 696, 780, 919, 1101, 1374, 1560
NmuCI GTSAC 5 cut(s) 344, 464, 601, 1227, 1542
NspI RCATGY 2 cut(s) 416, 741
PagI TCATGA 1 cut(s) 678
PaqCI CACCTGC 1 cut(s) 1570
PasI CCCWGGG 1 cut(s) 1522
PciI ACATGT 1 cut(s) 737
PciSI GCTCTTC 1 cut(s) 369
PctI GAATGC 1 cut(s) 583
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 3 cut(s) 554, 887, 1127
PkrI GCNGC 5 cut(s) 88, 658, 1024, 1075, 1707
PleI GAGTC 4 cut(s) 341, 1171, 1260, 1495
PpsI GAGTC 4 cut(s) 341, 1171, 1260, 1495
PscI ACATGT 1 cut(s) 737
PshBI ATTAAT 2 cut(s) 717, 807
PsiI TTATAA 1 cut(s) 927
Psp1406I AACGTT 1 cut(s) 819
Psp6I CCWGG 2 cut(s) 950, 1521
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 2 cut(s) 950, 1521
PspN4I GGNNCC 8 cut(s) 234, 534, 696, 780, 919, 1101, 1374, 1560
PspPI GGNCC 3 cut(s) 1012, 1041, 1419
PstNI CAGNNNCTG 1 cut(s) 1130
PsuI RGATCY 3 cut(s) 232, 917, 1411
RsaI GTAC 6 cut(s) 5, 242, 1113, 1572, 1676, 1720
RsaNI GTAC 6 cut(s) 4, 241, 1112, 1571, 1675, 1719
RseI CAYNNNNRTG 2 cut(s) 1750, 1846
SalI GTCGAC 1 cut(s) 1498
SapI GCTCTTC 1 cut(s) 369
SaqAI TTAA 6 cut(s) 717, 807, 1179, 1320, 1368, 1954
SatI GCNGC 5 cut(s) 87, 657, 1023, 1074, 1706
Sau3AI GATC 8 cut(s) 34, 173, 232, 917, 967, 1279, 1411, 1802
Sau96I GGNCC 3 cut(s) 1012, 1041, 1419
ScaI AGTACT 1 cut(s) 1676
SchI GAGTC 4 cut(s) 341, 1172, 1261, 1495
ScrFI CCNGG 5 cut(s) 952, 1044, 1045, 1168, 1523
SduI GDGCHC 2 cut(s) 519, 1482
SfaNI GCATC 3 cut(s) 363, 1009, 1384
SinI GGWCC 1 cut(s) 1419
SmaI CCCGGG 1 cut(s) 1045
SmiMI CAYNNNNRTG 2 cut(s) 1750, 1846
SmlI CTYRAG 3 cut(s) 477, 704, 1007
SmoI CTYRAG 3 cut(s) 477, 704, 1007
Sse9I AATT 8 cut(s) 123, 207, 321, 454, 501, 583, 999, 1270
SsiI CCGC 4 cut(s) 236, 244, 1417, 1613
SspI AATATT 1 cut(s) 688
SspMI CTAG 5 cut(s) 69, 894, 1056, 1301, 1377
StyD4I CCNGG 5 cut(s) 950, 1042, 1043, 1166, 1521
StyI CCWWGG 4 cut(s) 340, 1751, 1847, 1910
TaaI ACNGT 5 cut(s) 725, 1312, 1348, 1723, 1827
TaiI ACGT 3 cut(s) 64, 429, 822
TaqI TCGA 2 cut(s) 1350, 1499
TasI AATT 8 cut(s) 123, 207, 321, 454, 501, 583, 999, 1270
TatI WGTACW 1 cut(s) 1674
TfiI GAWTC 3 cut(s) 554, 887, 1127
Tru1I TTAA 6 cut(s) 717, 807, 1179, 1320, 1368, 1954
Tru9I TTAA 6 cut(s) 717, 807, 1179, 1320, 1368, 1954
TscAI CASTG 2 cut(s) 730, 1734
TseFI GTSAC 5 cut(s) 344, 464, 601, 1227, 1542
TseI GCWGC 5 cut(s) 86, 656, 1022, 1073, 1705
Tsp45I GTSAC 5 cut(s) 344, 464, 601, 1227, 1542
TspGWI ACGGA 1 cut(s) 1588
TspMI CCCGGG 1 cut(s) 1043
TspRI CASTG 2 cut(s) 730, 1734
VpaK11BI GGWCC 1 cut(s) 1419
VspI ATTAAT 2 cut(s) 717, 807
XagI CCTNNNNNAGG 1 cut(s) 1866
XapI RAATTY 4 cut(s) 123, 321, 501, 999
XceI RCATGY 2 cut(s) 416, 741
XcmI CCANNNNNNNNNTGG 3 cut(s) 958, 1519, 1651
XmaI CCCGGG 1 cut(s) 1043
XmiI GTMKAC 5 cut(s) 251, 399, 435, 1499, 1780
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 5 cut(s) 69, 894, 1056, 1301, 1377
ZrmI AGTACT 1 cut(s) 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.