RLG00000025036

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0001181
Physical Location & Seq
Reverse (-)
41476677 .. 41479124
2448 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025036

Sequence Viewer

Length: 1977 bp
ATGTACCGAAAGGGGAGTGAGTTCTTTATGGTTGATCCTCCTCTAAATAGTAATTACAGACGACCTAGTAGCGTGACTCCTATTATGGACACGGCAGTGCGTATTGCTCAGATGTCCACCACGCATAGGAGAATTTTTGGTGAGAGATTGAAGTTCCTTTATTCGCATTGGAACAAACACCGATCTGATATGTGGGGTTGTTCTGATGTTATTGCAATAGGAAAACTACCAGCATCAAAGGATCCGCAGTACCGCAAGTCTACGGCATTGAATGTTTGGCTGGCGGGTTTTGAGTTTCCAGAGACAATGATGGTGTTCACTAAGAAAAGAATTCATTTCTTCTGCAACCAAGGTGACTCTTTCAATCCTGCTCTTCTCAGGATGCCTGCAATGAAGGCTGTGGGTGTAGACATTGTGAGGCATGTGATACGAGACGTTGATGTCTACTCTGCTCTGATGGATAATTTATTGCGTGACATTTGCACTCAAGCAAAGGCCGATGGCCATGAAATTCCTGTTGTGGGGCACATAGGAGGGGAGGTTCCTGAGGGATTTCTTTTTGAATCTTGGTCTGAAAAGCTGAAGAATGCAAATTTTCGGATGAGTGATGTAACTAATGGGTTGTCCGACTTGTTGTCTGTCAAAGACAATGAGGAGCTTGTGAATGTGAAGAGAGCTGCTTTCTTGACTACTAAGGTCATGAATAATATTGTGGTTCCAAATCTTGAGTTTGTTATTAATCACAGTGAGAAGGTAACACATTCTTTTTTGATGGATGAGATGGTGAAGGCTATACAGGAACCCTCTAAAGCTTTTGCAAAGCTGATTAATGTAGAAAACGTTGGCATCTGTTACCCTCCTATTCTTCAGAGTGGTGTCGGTGGCAATGATGAGTTACTTTCATATGATTCTGCTAGTGTGGTCATTTGTGGTTTTGGATCCCGTTATAAGAGTTACTGCTCAAATGTAGCCAGGACATTTTTGGTTGATCCCAATCCCTTTCAGAGAAAGGCACATGAAATTCTTCTCAAGGCCCATGATGCAGCCATTAGTGAGTTGAGGCCCGGGAACAAAGCTAGTTCTGCATATCAAGCAGCTCGTTCTGTTGTGGAGAAGGAGGCCCCTGAGTTAGTACCTAATCTGACAGAATCTGCTGGGACAGGCATTGGTATTGAGCTTGTTGAGTCCCGGTTGAAACTTAATGCGAACAATGACCTTGTGCTGAAAGCAGGAATGGTGTTCAATGTGTCACTTGGTTTTGAGGACTTGCAGAGTCAGGGTGGTCTTACCAATTCAAAGGATCAGAGCTTCTCTTTGTTGCTAGCTGATACTGTTGTTATTAACAATGTCAAGCCAGAGGTCTCGACAGTCGAAAGTGCTAAAGCTATTGAGGTTCCTAGTAAAATGAAACAAGATGCTAATGGAACAGAAGATCTGCGGTCCAGCAAAAGGATGAGGATCAAGCTTGACTGGAATGATGAGCTTGACTGGAACGATGAGCCCACTTTCTCTGTTGTGTCCACTCAGCCTTCCACTTTTTCCCTGGGTGTTCCATTGCTTTGGTCACATTCGGGTCTGGCACCTGCTGATGTACAGACTGACCCTCTCAATGCCAGAGAGAGGTTGTCATATGCGGAAAGGGGGAAGTCCACAGGGATAAAACCCAGAGAGAAGATGGATATGCTAATAGCCAAGTACTATATTGATGACACAAAGGGTCGTGTGCAGCTAACAGAGCGTACAGTTCCAGTGTCGCAGACAGAAACACCTCCATGGCAGACAGAAAGCGCTTCATATGGTATACCTTCATGGAAGAGAGAAAGATCATCATGGAAGAGAGAAAGACCGTCTTCATTCGTTACACCTCCATGGGTAGCAAAACCTGCATTAGGCACACTTGACTGGAAGACAGACAGACCTGTTACACCTCCAAGGAAGAAACAAGGTGCATTTGGTTATGCTTATTGTTTCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

659

Amino Acids

73.61

Weight (kDa)

8.43

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FACT-Spt16_Nlob PF14826 45 - 206 6e-27 FACT complex subunit SPT16 N-terminal lobe domain
Peptidase_M24 PF00557 251 - 447 1.3e-26 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 948
AarI CACCTGC 1 cut(s) 1591
AasI GACNNNNNNGTC 1 cut(s) 440
Acc36I ACCTGC 2 cut(s) 1591, 1891
AccB1I GGYRCC 1 cut(s) 1579
AccI GTMKAC 4 cut(s) 260, 408, 444, 1801
AciI CCGC 5 cut(s) 245, 253, 284, 1438, 1634
AclI AACGTT 1 cut(s) 840
AclWI GGATC 8 cut(s) 29, 236, 249, 933, 946, 983, 1308, 1466
AcoI YGGCCR 1 cut(s) 502
AcsI RAATTY 5 cut(s) 132, 330, 510, 592, 1020
AcuI CTGAAG 2 cut(s) 602, 851
AfaI GTAC 6 cut(s) 5, 251, 1134, 1593, 1697, 1741
AfeI AGCGCT 1 cut(s) 1789
AfiI CCNNNNNNNGG 5 cut(s) 126, 521, 1449, 1620, 1889
AgsI TTSAA 7 cut(s) 151, 271, 364, 563, 1195, 1243, 1296
AhdI GACNNNNNGTC 1 cut(s) 634
AjnI CCWGG 2 cut(s) 971, 1542
AleI CACNNNNGTG 1 cut(s) 95
AloI GAACNNNNNNTCC 2 cut(s) 525, 557
Alw26I GTCTC 3 cut(s) 296, 426, 1366
AlwI GGATC 8 cut(s) 29, 236, 249, 933, 946, 983, 1308, 1466
AlwNI CAGNNNCTG 1 cut(s) 1151
Ama87I CYCGRG 1 cut(s) 1064
Aor51HI AGCGCT 1 cut(s) 1789
AoxI GGCC 5 cut(s) 495, 502, 1032, 1061, 1119
ApeKI GCWGC 4 cut(s) 677, 1043, 1094, 1726
ApoI RAATTY 5 cut(s) 132, 330, 510, 592, 1020
AseI ATTAAT 2 cut(s) 738, 828
Asp700I GAANNNNTTC 1 cut(s) 1023
AspLEI GCGC 1 cut(s) 1790
AspS9I GGNCC 4 cut(s) 1033, 1062, 1120, 1440
AsuC2I CCSGG 3 cut(s) 1065, 1066, 1189
AsuHPI GGTGA 3 cut(s) 152, 365, 796
AsuNHI GCTAGC 1 cut(s) 1321
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 1 cut(s) 1440
AxyI CCTNAGG 1 cut(s) 546
BaeGI GKGCMC 1 cut(s) 528
BaeI ACNNNNGTAYC 2 cut(s) 1320, 1353
BalI TGGCCA 1 cut(s) 504
BamHI GGATCC 2 cut(s) 241, 938
BanI GGYRCC 1 cut(s) 1579
BanII GRGCYC 1 cut(s) 1503
BbsI GAAGAC 2 cut(s) 1842, 1913
BbvI GCAGC 4 cut(s) 664, 1055, 1106, 1738
BccI CCATC 6 cut(s) 304, 451, 494, 766, 775, 1669
BceAI ACGGC 2 cut(s) 108, 279
BciT130I CCWGG 2 cut(s) 973, 1544
BcnI CCSGG 3 cut(s) 1065, 1066, 1189
BcoDI GTCTC 3 cut(s) 296, 426, 1366
BfaI CTAG 5 cut(s) 66, 915, 1077, 1322, 1398
BfoI RGCGCY 1 cut(s) 1791
BfuAI ACCTGC 2 cut(s) 1591, 1891
BglII AGATCT 1 cut(s) 1432
BisI GCNGC 4 cut(s) 678, 1044, 1095, 1727
BlsI GCNGC 4 cut(s) 679, 1045, 1096, 1728
BmcAI AGTACT 1 cut(s) 1697
Bme1390I CCNGG 5 cut(s) 973, 1065, 1066, 1189, 1544
Bme18I GGWCC 1 cut(s) 1440
BmeRI GACNNNNNGTC 1 cut(s) 634
BmeT110I CYCGRG 1 cut(s) 1064
BmgT120I GGNCC 4 cut(s) 1033, 1062, 1120, 1440
BmiI GGNNCC 8 cut(s) 243, 543, 717, 801, 940, 1122, 1395, 1581
BmrFI CCNGG 5 cut(s) 973, 1065, 1066, 1189, 1544
BmsI GCATC 5 cut(s) 242, 372, 855, 1030, 1405
BmtI GCTAGC 1 cut(s) 1325
BpiI GAAGAC 2 cut(s) 1842, 1913
BpuEI CTTGAG 3 cut(s) 471, 746, 1013
BpuMI CCSGG 3 cut(s) 1065, 1066, 1189
BsaBI GATNNNNATC 2 cut(s) 993, 1457
BsaI GGTCTC 1 cut(s) 1366
BsaJI CCNNGG 7 cut(s) 349, 1064, 1542, 1543, 1772, 1868, 1931
BsaXI ACNNNNNCTCC 2 cut(s) 525, 555
Bsc4I CCNNNNNNNGG 5 cut(s) 126, 521, 1449, 1620, 1889
Bse1I ACTGG 4 cut(s) 1475, 1493, 1748, 1907
Bse21I CCTNAGG 1 cut(s) 546
Bse3DI GCAATG 3 cut(s) 396, 892, 1553
Bse8I GATNNNNATC 2 cut(s) 993, 1457
BseBI CCWGG 2 cut(s) 973, 1544
BseDI CCNNGG 7 cut(s) 349, 1064, 1542, 1543, 1772, 1868, 1931
BseGI GGATG 4 cut(s) 387, 606, 781, 1458
BseJI GATNNNNATC 2 cut(s) 993, 1457
BseLI CCNNNNNNNGG 5 cut(s) 126, 521, 1449, 1620, 1889
BseMI GCAATG 3 cut(s) 396, 892, 1553
BseMII CTCAG 5 cut(s) 122, 391, 537, 1116, 1538
BseNI ACTGG 4 cut(s) 1475, 1493, 1748, 1907
BseRI GAGGAG 2 cut(s) 30, 668
BseSI GKGCMC 1 cut(s) 528
BseXI GCAGC 4 cut(s) 664, 1055, 1106, 1738
BseYI CCCAGC 1 cut(s) 1154
BsgI GTGCAG 1 cut(s) 1745
BshFI GGCC 5 cut(s) 497, 504, 1034, 1063, 1121
BshNI GGYRCC 1 cut(s) 1579
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 2 cut(s) 1065, 1189
BslFI GGGAC 2 cut(s) 1171, 1171
BslI CCNNNNNNNGG 5 cut(s) 126, 521, 1449, 1620, 1889
BsmAI GTCTC 3 cut(s) 296, 426, 1366
BsmBI CGTCTC 1 cut(s) 426
BsmFI GGGAC 2 cut(s) 1171, 1171
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 5 cut(s) 497, 504, 1034, 1063, 1121
Bso31I GGTCTC 1 cut(s) 1366
BsoBI CYCGRG 1 cut(s) 1064
Bsp1286I GDGCHC 2 cut(s) 528, 1503
Bsp1407I TGTACA 1 cut(s) 1591
Bsp143I GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
Bsp19I CCATGG 2 cut(s) 1772, 1868
BspACI CCGC 5 cut(s) 245, 253, 284, 1438, 1634
BspANI GGCC 5 cut(s) 497, 504, 1034, 1063, 1121
BspCNI CTCAG 5 cut(s) 121, 390, 538, 1117, 1537
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 8 cut(s) 243, 543, 717, 801, 940, 1122, 1395, 1581
BspMI ACCTGC 2 cut(s) 1591, 1891
BspOI GCTAGC 1 cut(s) 1325
BspPI GGATC 8 cut(s) 29, 236, 249, 933, 946, 983, 1308, 1466
BspQI GCTCTTC 1 cut(s) 378
BspT107I GGYRCC 1 cut(s) 1579
BspTNI GGTCTC 1 cut(s) 1366
BsrDI GCAATG 3 cut(s) 396, 892, 1553
BsrGI TGTACA 1 cut(s) 1591
BsrI ACTGG 4 cut(s) 1475, 1493, 1748, 1907
BssECI CCNNGG 7 cut(s) 349, 1064, 1542, 1543, 1772, 1868, 1931
BssMI GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
BssNAI GTATAC 1 cut(s) 1802
BssT1I CCWWGG 4 cut(s) 349, 1772, 1868, 1931
Bst1107I GTATAC 1 cut(s) 1802
Bst2UI CCWGG 2 cut(s) 973, 1544
Bst4CI ACNGT 5 cut(s) 746, 1333, 1369, 1744, 1848
Bst6I CTCTTC 4 cut(s) 378, 665, 1808, 1829
BstAPI GCANNNNNTGC 1 cut(s) 1883
BstAUI TGTACA 1 cut(s) 1591
BstC8I GCNNGC 3 cut(s) 282, 387, 1323
BstDEI CTNAG 7 cut(s) 108, 321, 377, 546, 693, 1125, 1524
BstDSI CCRYGG 2 cut(s) 1772, 1868
BstENI CCTNNNNNAGG 1 cut(s) 1887
BstF5I GGATG 4 cut(s) 387, 606, 781, 1458
BstH2I RGCGCY 1 cut(s) 1791
BstHHI GCGC 1 cut(s) 1790
BstKTI GATC 9 cut(s) 37, 185, 244, 941, 991, 1303, 1435, 1461, 1826
BstMAI GTCTC 3 cut(s) 296, 426, 1366
BstMBI GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
BstMWI GCNNNNNNNGC 6 cut(s) 395, 1040, 1082, 1091, 1735, 1883
BstNI CCWGG 2 cut(s) 973, 1544
BstNSI RCATGY 1 cut(s) 425
BstSCI CCNGG 5 cut(s) 971, 1063, 1064, 1187, 1542
BstSLI GKGCMC 1 cut(s) 528
BstV1I GCAGC 4 cut(s) 664, 1055, 1106, 1738
BstV2I GAAGAC 2 cut(s) 1842, 1913
BstX2I RGATCY 3 cut(s) 241, 938, 1432
BstXI CCANNNNNNTGG 1 cut(s) 1560
BstYI RGATCY 3 cut(s) 241, 938, 1432
BstZ17I GTATAC 1 cut(s) 1802
Bsu36I CCTNAGG 1 cut(s) 546
BsuRI GGCC 5 cut(s) 497, 504, 1034, 1063, 1121
BtgI CCRYGG 2 cut(s) 1772, 1868
BtsCI GGATG 4 cut(s) 387, 606, 781, 1458
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 3 cut(s) 102, 751, 1755
BveI ACCTGC 2 cut(s) 1591, 1891
Cac8I GCNNGC 3 cut(s) 282, 387, 1323
CaiI CAGNNNCTG 1 cut(s) 1151
CciI TCATGA 1 cut(s) 699
CfoI GCGC 1 cut(s) 1790
Cfr13I GGNCC 4 cut(s) 1033, 1062, 1120, 1440
Cfr9I CCCGGG 1 cut(s) 1064
Csp6I GTAC 6 cut(s) 4, 250, 1133, 1592, 1696, 1740
CviAII CATG 9 cut(s) 422, 506, 700, 1016, 1037, 1773, 1809, 1830, 1869
CviQI GTAC 6 cut(s) 4, 250, 1133, 1592, 1696, 1740
DdeI CTNAG 7 cut(s) 108, 321, 377, 546, 693, 1125, 1524
DpnI GATC 9 cut(s) 36, 184, 243, 940, 990, 1302, 1434, 1460, 1825
DpnII GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
DrdI GACNNNNNNGTC 1 cut(s) 440
DriI GACNNNNNGTC 1 cut(s) 634
DseDI GACNNNNNNGTC 1 cut(s) 440
EaeI YGGCCR 1 cut(s) 502
Eam1104I CTCTTC 4 cut(s) 378, 665, 1808, 1829
Eam1105I GACNNNNNGTC 1 cut(s) 634
EarI CTCTTC 4 cut(s) 378, 665, 1808, 1829
Eco130I CCWWGG 4 cut(s) 349, 1772, 1868, 1931
Eco24I GRGCYC 1 cut(s) 1503
Eco31I GGTCTC 1 cut(s) 1366
Eco47I GGWCC 1 cut(s) 1440
Eco47III AGCGCT 1 cut(s) 1789
Eco57I CTGAAG 2 cut(s) 602, 851
Eco81I CCTNAGG 1 cut(s) 546
Eco88I CYCGRG 1 cut(s) 1064
EcoNI CCTNNNNNAGG 1 cut(s) 1887
EcoO109I RGGNCCY 1 cut(s) 1120
EcoRI GAATTC 1 cut(s) 330
EcoRII CCWGG 2 cut(s) 971, 1542
EcoT14I CCWWGG 4 cut(s) 349, 1772, 1868, 1931
EcoT38I GRGCYC 1 cut(s) 1503
ErhI CCWWGG 4 cut(s) 349, 1772, 1868, 1931
Esp3I CGTCTC 1 cut(s) 426
FaeI CATG 9 cut(s) 425, 509, 703, 1019, 1040, 1776, 1812, 1833, 1872
FalI AAGNNNNNCTT 2 cut(s) 1834, 1866
FaqI GGGAC 2 cut(s) 1171, 1171
FatI CATG 9 cut(s) 421, 505, 699, 1015, 1036, 1772, 1808, 1829, 1868
FauI CCCGC 1 cut(s) 277
FauNDI CATATG 3 cut(s) 904, 1630, 1795
FblI GTMKAC 4 cut(s) 260, 408, 444, 1801
Fnu4HI GCNGC 4 cut(s) 678, 1044, 1095, 1727
FokI GGATG 4 cut(s) 394, 613, 788, 1465
FriOI GRGCYC 1 cut(s) 1503
Fsp4HI GCNGC 4 cut(s) 678, 1044, 1095, 1727
FspBI CTAG 5 cut(s) 66, 915, 1077, 1322, 1398
GlaI GCGC 1 cut(s) 1789
GluI GCNGC 4 cut(s) 678, 1044, 1095, 1727
GsaI CCCAGC 1 cut(s) 1158
HaeII RGCGCY 1 cut(s) 1791
HaeIII GGCC 5 cut(s) 497, 504, 1034, 1063, 1121
HapII CCGG 2 cut(s) 1065, 1189
HhaI GCGC 1 cut(s) 1790
Hin1II CATG 9 cut(s) 425, 509, 703, 1019, 1040, 1776, 1812, 1833, 1872
Hin6I GCGC 1 cut(s) 1788
HinP1I GCGC 1 cut(s) 1788
HindIII AAGCTT 2 cut(s) 810, 1463
HinfI GANTC 7 cut(s) 76, 356, 563, 908, 1148, 1184, 1273
HpaII CCGG 2 cut(s) 1065, 1189
HphI GGTGA 3 cut(s) 152, 365, 796
Hpy166II GTNNAC 8 cut(s) 117, 261, 318, 409, 445, 1521, 1650, 1802
Hpy188III TCNNGA 7 cut(s) 299, 379, 545, 685, 700, 725, 1363
Hpy8I GTNNAC 8 cut(s) 117, 261, 318, 409, 445, 1521, 1650, 1802
HpyAV CCTTC 6 cut(s) 388, 745, 781, 1108, 1539, 1815
HpyCH4III ACNGT 5 cut(s) 746, 1333, 1369, 1744, 1848
HpyCH4IV ACGT 2 cut(s) 435, 840
HpyF10VI GCNNNNNNNGC 6 cut(s) 395, 1040, 1082, 1091, 1735, 1883
HpyF3I CTNAG 7 cut(s) 108, 321, 377, 546, 693, 1125, 1524
HpySE526I ACGT 2 cut(s) 435, 840
Hsp92II CATG 9 cut(s) 425, 509, 703, 1019, 1040, 1776, 1812, 1833, 1872
HspAI GCGC 1 cut(s) 1788
Kzo9I GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 1 cut(s) 655
Lsp1109I GCAGC 4 cut(s) 664, 1055, 1106, 1738
LweI GCATC 5 cut(s) 242, 372, 855, 1030, 1405
MaeI CTAG 5 cut(s) 66, 915, 1077, 1322, 1398
MaeII ACGT 2 cut(s) 435, 840
MalI GATC 9 cut(s) 36, 184, 243, 940, 990, 1302, 1434, 1460, 1825
MboI GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
MflI RGATCY 3 cut(s) 241, 938, 1432
MhlI GDGCHC 2 cut(s) 528, 1503
MlsI TGGCCA 1 cut(s) 504
MluCI AATT 8 cut(s) 52, 132, 330, 463, 510, 592, 1020, 1291
MluNI TGGCCA 1 cut(s) 504
MlyI GAGTC 4 cut(s) 70, 350, 1193, 1282
MmeI TCCRAC 1 cut(s) 651
Mox20I TGGCCA 1 cut(s) 504
MroXI GAANNNNTTC 1 cut(s) 1023
MscI TGGCCA 1 cut(s) 504
MseI TTAA 5 cut(s) 738, 828, 1200, 1341, 1975
MslI CAYNNNNRTG 3 cut(s) 95, 1771, 1867
Msp20I TGGCCA 1 cut(s) 504
MspI CCGG 2 cut(s) 1065, 1189
MspR9I CCNGG 5 cut(s) 973, 1065, 1066, 1189, 1544
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 2 cut(s) 973, 1544
MwoI GCNNNNNNNGC 6 cut(s) 395, 1040, 1082, 1091, 1735, 1883
NciI CCSGG 3 cut(s) 1065, 1066, 1189
NcoI CCATGG 2 cut(s) 1772, 1868
NdeI CATATG 3 cut(s) 904, 1630, 1795
NdeII GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
NheI GCTAGC 1 cut(s) 1321
NlaIII CATG 9 cut(s) 425, 509, 703, 1019, 1040, 1776, 1812, 1833, 1872
NlaIV GGNNCC 8 cut(s) 243, 543, 717, 801, 940, 1122, 1395, 1581
NmuCI GTSAC 5 cut(s) 73, 353, 473, 1248, 1563
NspI RCATGY 1 cut(s) 425
OliI CACNNNNGTG 1 cut(s) 95
PagI TCATGA 1 cut(s) 699
PaqCI CACCTGC 1 cut(s) 1591
PasI CCCWGGG 1 cut(s) 1543
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 1 cut(s) 592
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 3 cut(s) 563, 908, 1148
PkrI GCNGC 4 cut(s) 679, 1045, 1096, 1728
PleI GAGTC 4 cut(s) 70, 350, 1192, 1281
PpsI GAGTC 4 cut(s) 70, 350, 1192, 1281
PshBI ATTAAT 2 cut(s) 738, 828
PsiI TTATAA 1 cut(s) 948
Psp1406I AACGTT 1 cut(s) 840
Psp6I CCWGG 2 cut(s) 971, 1542
PspFI CCCAGC 1 cut(s) 1154
PspGI CCWGG 2 cut(s) 971, 1542
PspN4I GGNNCC 8 cut(s) 243, 543, 717, 801, 940, 1122, 1395, 1581
PspPI GGNCC 4 cut(s) 1033, 1062, 1120, 1440
PstNI CAGNNNCTG 1 cut(s) 1151
PsuI RGATCY 3 cut(s) 241, 938, 1432
RsaI GTAC 6 cut(s) 5, 251, 1134, 1593, 1697, 1741
RsaNI GTAC 6 cut(s) 4, 250, 1133, 1592, 1696, 1740
RseI CAYNNNNRTG 3 cut(s) 95, 1771, 1867
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 5 cut(s) 738, 828, 1200, 1341, 1975
SatI GCNGC 4 cut(s) 678, 1044, 1095, 1727
Sau3AI GATC 9 cut(s) 34, 182, 241, 938, 988, 1300, 1432, 1458, 1823
Sau96I GGNCC 4 cut(s) 1033, 1062, 1120, 1440
ScaI AGTACT 1 cut(s) 1697
SchI GAGTC 4 cut(s) 70, 350, 1193, 1282
ScrFI CCNGG 5 cut(s) 973, 1065, 1066, 1189, 1544
SduI GDGCHC 2 cut(s) 528, 1503
SfaNI GCATC 5 cut(s) 242, 372, 855, 1030, 1405
SinI GGWCC 1 cut(s) 1440
SmaI CCCGGG 1 cut(s) 1066
SmiMI CAYNNNNRTG 3 cut(s) 95, 1771, 1867
SmlI CTYRAG 3 cut(s) 486, 725, 1028
SmoI CTYRAG 3 cut(s) 486, 725, 1028
Sse9I AATT 8 cut(s) 52, 132, 330, 463, 510, 592, 1020, 1291
SsiI CCGC 5 cut(s) 245, 253, 284, 1438, 1634
SspI AATATT 1 cut(s) 709
SspMI CTAG 5 cut(s) 66, 915, 1077, 1322, 1398
StyD4I CCNGG 5 cut(s) 971, 1063, 1064, 1187, 1542
StyI CCWWGG 4 cut(s) 349, 1772, 1868, 1931
TaaI ACNGT 5 cut(s) 746, 1333, 1369, 1744, 1848
TaiI ACGT 2 cut(s) 438, 843
TaqI TCGA 2 cut(s) 1364, 1371
TasI AATT 8 cut(s) 52, 132, 330, 463, 510, 592, 1020, 1291
TatI WGTACW 2 cut(s) 1591, 1695
TfiI GAWTC 3 cut(s) 563, 908, 1148
Tru1I TTAA 5 cut(s) 738, 828, 1200, 1341, 1975
Tru9I TTAA 5 cut(s) 738, 828, 1200, 1341, 1975
TscAI CASTG 3 cut(s) 102, 751, 1755
TseFI GTSAC 5 cut(s) 73, 353, 473, 1248, 1563
TseI GCWGC 4 cut(s) 677, 1043, 1094, 1726
Tsp45I GTSAC 5 cut(s) 73, 353, 473, 1248, 1563
TspMI CCCGGG 1 cut(s) 1064
TspRI CASTG 3 cut(s) 102, 751, 1755
VpaK11BI GGWCC 1 cut(s) 1440
VspI ATTAAT 2 cut(s) 738, 828
XagI CCTNNNNNAGG 1 cut(s) 1887
XapI RAATTY 5 cut(s) 132, 330, 510, 592, 1020
XceI RCATGY 1 cut(s) 425
XcmI CCANNNNNNNNNTGG 3 cut(s) 979, 1540, 1672
XmaI CCCGGG 1 cut(s) 1064
XmiI GTMKAC 4 cut(s) 260, 408, 444, 1801
XmnI GAANNNNTTC 1 cut(s) 1023
XspI CTAG 5 cut(s) 66, 915, 1077, 1322, 1398
ZrmI AGTACT 1 cut(s) 1697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.