Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001521

Physical Location & Seq

Genomic Coordinates Reverse (-)

6852907 .. 6858068

Gene Structure 5162 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g11430.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGAAGAGTCTTCTTCCTCCTCCTCCTCCTCATCTCCATCTCCGTCTTCTTCGACTGACGCCGTTAGGGACGCCACTTCTTCCAGCGCCGTGGCTTCGTCTTCGAGCACCTCGCACGTCCGCGACGAGGAGGACGATCACAACCAGTACCACCACCACCACAATTTCCGGCAGCCGGAGCCGGGAGTCAACGAAATCGGACCTTCTTACAGAGTCGGCGGCTTATCGGGGTTCGATGAGACGGCGTCTGTGATTCGAGATGACACGTGGTCCTGCATCATCGTCCTCCTCACCTTCTGGTTCTTCGTATCGATGACTTTGATTTTGGGAGTCTACGGGTCCGAGACCATGGAGCTTGGCCCTGATACTTCGATTCTTCTGCAACCTAACCCCATATTTGTGCAGTCTATGAAGGTGGAAGAGCTGAATATAACTAGGCCTGGGCCTGTGCTATATGGTTTTTATGACATTCCACCCCTTAGTACTGTTGCGAATTGGTCAGAAACACACAATGCTACAGTTCCAGCTGATTTTCATAAGGAGTGGATATATTACCTAAATAAGGGGTCTCAAATAACTATATCGTACAGCGTTTCCTCGCCCAGCACGTCTATTTTTCTTATAATTGCTCAAGGTAAAGAAGGCCTTGCCCAGTGGCTTGAAGAACCAACATATCCTAATACTACATTGTCATGGAACCTCGTTCATGGAAGTGGCAAGATTCAGCAGGACATATCAACATCTTATAGTTACTATATTTCTGTGGGTAACATGAACTACGAGGATGTGGAGGTTCAATTAAACTTCACGGTGAATGCTCTATTGTATGATACTAGTGAAGCCTATTACAAGTGTACATTCACAGATACGTCCTGCAGTTTGAAAGTTTTGTTTCCCAGTGGAAATGTTGGTGTGCTTACCTCTCCTGGTCCAGAGCAGAATATAGACAACCAGTATGTCAAACTCTCATATGGACCAAGATGGGCCACATATATCATTGGTATAGGGGCGATGACTGTACTGATGCTATTGGCCTTCAACTTCTTGAATAAGTTCCGCTGTAACAACGAAGATGGAATAAGAGTACAGCATCCGGAGTTCAGACCAGAAAGAGCCCCGTTGCTTTCATACAAAGATGATGATCAATCAAGTTGGGGTTCATCTTATGATTCTGCCTCGAACGATGAGGGGGATCTTGAAGACCTTATGACAGCAGGTTCTCTTGATGGTGAAAGTAACAATACTCGTCGTCTTTGTGCAATTTGCTTTGATGCTCCTAGGGACTGCTTTTTCCTCCCATGTGGGCACTGTGCCGCTTGTTTTGATTGTGCGACAAGGATAGCGGAAGCAGCTGCTACTTGTCCCATTTGTCGGAGGAACATAAAGAAGGTGAGGAAGATATTTACAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4792 DUF4793 zf-C3HC4_3

Protein Analysis

471

Amino Acids

52.08

Weight (kDa)

4.75

Isoelectric Point (pI)

50.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APD1-4_N	PF16040	148 - 222	9.2e-21	E3 ubiquitin-protein ligase APD1-4, N-terminal
APD1-4_M	PF16041	246 - 350	2.5e-32	E3 ubiquitin-protein ligase APD1-4, middle domain
zf-C3HC4_3	PF13920	422 - 470	7.1e-14	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	424 - 464	2.2e-06	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01450
fragaria_vesca	FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_3g38600 FvH4_6g11430 FvH4_6g11430 FvH4_6g11430 FvH4_6g11430 FvH4_6g11430
malus_domestica	MD03G1070000.v1.1 MD04G1153100.v1.1 MD11G1073800.v1.1 MD12G1166600.v1.1
prunus_persica	Prupe.6G057100_v2.0.a1 Prupe.6G057100_v2.0.a1 Prupe.6G277400_v2.0.a1 Prupe.6G277400_v2.0.a1
pyrus_communis	pycom03g05570 pycom11g06120 pycom12g15850
rosa_chinensis	RchiOBHm_Chr3g0463121 RchiOBHm_Chr5g0069661
rosa_laevigata	RLG00000024811 RLG00000036082
rosa_multiflora	Rmu_sc0000738.1_g000037 Rmu_sc0000766.1_g000040 Rmu_sc0008595.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011420 Rroxscaffold_6G00416950
rosa_rugosa	Rorug03G0061500 Rorug03G0061600 Rorug03G0061700 Rorug05G0399000 Rorug05G0399100
rosa_samantha	Rh3AG119800 Rh3BG124200 Rh3CG126200 Rh3DG125200 Rh5AG455800 Rh5BG474800 Rh5CG498200 Rh5DG486300
rosa_wichuraiana	Rw3G010130 Rw5G042530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	623
Acc36I	ACCTGC	1 cut(s)	1205
AccI	GTMKAC	1 cut(s)	333
AccII	CGCG	1 cut(s)	123
AccIII	TCCGGA	1 cut(s)	1093
AciI	CCGC	5 cut(s)	121, 219, 1057, 1314, 1343
AclWI	GGATC	1 cut(s)	1200
AcvI	CACGTG	1 cut(s)	267
AcyI	GRCGYC	3 cut(s)	60, 72, 245
AfaI	GTAC	6 cut(s)	149, 484, 587, 856, 1020, 1086
AfiI	CCNNNNNNNGG	5 cut(s)	127, 175, 182, 562, 1371
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	6 cut(s)	662, 797, 883, 1039, 1048, 1199
AhdI	GACNNNNNGTC	1 cut(s)	268
AhlI	ACTAGT	1 cut(s)	833
AjiI	CACGTC	2 cut(s)	118, 609
AjnI	CCWGG	2 cut(s)	439, 925
AluBI	AGCT	4 cut(s)	355, 424, 527, 1352
AluI	AGCT	4 cut(s)	355, 424, 527, 1352
Alw21I	GWGCWC	1 cut(s)	110
Alw26I	GTCTC	3 cut(s)	233, 338, 573
AlwI	GGATC	1 cut(s)	1200
Aor13HI	TCCGGA	1 cut(s)	1093
AoxI	GGCC	6 cut(s)	358, 437, 443, 643, 984, 1032
ApeKI	GCWGC	3 cut(s)	172, 1349, 1352
ArsI	GACNNNNNNTTYG	2 cut(s)	307, 339
Asp700I	GAANNNNTTC	1 cut(s)	1052
AspA2I	CCTAGG	1 cut(s)	1277
AspLEI	GCGC	1 cut(s)	89
AspS9I	GGNCC	8 cut(s)	200, 270, 339, 359, 443, 929, 974, 984
AsuC2I	CCSGG	1 cut(s)	183
AsuHPI	GGTGA	4 cut(s)	283, 823, 1241, 1402
AvaII	GGWCC	5 cut(s)	200, 270, 339, 929, 974
AvrII	CCTAGG	1 cut(s)	1277
BaeGI	GKGCMC	1 cut(s)	1308
BanII	GRGCYC	1 cut(s)	1117
BbrPI	CACGTG	1 cut(s)	267
BbsI	GAAGAC	4 cut(s)	3, 39, 93, 1206
Bbv12I	GWGCWC	1 cut(s)	110
BbvI	GCAGC	3 cut(s)	184, 1339, 1361
BccI	CCATC	4 cut(s)	46, 975, 1067, 1220
BceAI	ACGGC	3 cut(s)	47, 74, 258
BcgI	CGANNNNNNTGC	2 cut(s)	361, 395
BciT130I	CCWGG	2 cut(s)	441, 927
BclI	TGATCA	1 cut(s)	1141
BcnI	CCSGG	1 cut(s)	183
BcoDI	GTCTC	3 cut(s)	233, 338, 573
BcuI	ACTAGT	1 cut(s)	833
BfaI	CTAG	3 cut(s)	435, 834, 1278
BfmI	CTRYAG	2 cut(s)	516, 874
BfoI	RGCGCY	1 cut(s)	90
BfuAI	ACCTGC	1 cut(s)	1205
BisI	GCNGC	5 cut(s)	173, 220, 1314, 1350, 1353
BlnI	CCTAGG	1 cut(s)	1277
BlsI	GCNGC	5 cut(s)	174, 221, 1315, 1351, 1354
BmcAI	AGTACT	1 cut(s)	484
Bme1390I	CCNGG	3 cut(s)	183, 441, 927
Bme18I	GGWCC	5 cut(s)	200, 270, 339, 929, 974
BmeRI	GACNNNNNGTC	1 cut(s)	268
BmgBI	CACGTC	2 cut(s)	118, 609
BmgT120I	GGNCC	8 cut(s)	200, 270, 339, 359, 443, 929, 974, 984
BmiI	GGNNCC	3 cut(s)	180, 340, 698
BmrFI	CCNGG	3 cut(s)	183, 441, 927
BmrI	ACTGGG	2 cut(s)	646, 891
BmsI	GCATC	4 cut(s)	285, 1014, 1099, 1261
BmuI	ACTGGG	2 cut(s)	646, 891
BpiI	GAAGAC	4 cut(s)	3, 39, 93, 1206
BpuEI	CTTGAG	1 cut(s)	615
BpuMI	CCSGG	1 cut(s)	183
Bsa29I	ATCGAT	1 cut(s)	311
BsaAI	YACGTR	1 cut(s)	267
BsaBI	GATNNNNATC	1 cut(s)	1140
BsaHI	GRCGYC	3 cut(s)	60, 72, 245
BsaI	GGTCTC	2 cut(s)	338, 573
BsaJI	CCNNGG	4 cut(s)	90, 348, 440, 1277
BsaWI	WCCGGW	1 cut(s)	1093
Bsc4I	CCNNNNNNNGG	5 cut(s)	127, 175, 182, 562, 1371
Bse1I	ACTGG	4 cut(s)	145, 652, 897, 952
Bse8I	GATNNNNATC	1 cut(s)	1140
BseAI	TCCGGA	1 cut(s)	1093
BseBI	CCWGG	2 cut(s)	441, 927
BseCI	ATCGAT	1 cut(s)	311
BseDI	CCNNGG	4 cut(s)	90, 348, 440, 1277
BseGI	GGATG	2 cut(s)	790, 1090
BseJI	GATNNNNATC	1 cut(s)	1140
BseLI	CCNNNNNNNGG	5 cut(s)	127, 175, 182, 562, 1371
BseNI	ACTGG	4 cut(s)	145, 652, 897, 952
BseRI	GAGGAG	6 cut(s)	10, 13, 16, 19, 143, 278
BseSI	GKGCMC	1 cut(s)	1308
BseXI	GCAGC	3 cut(s)	184, 1339, 1361
BseYI	CCCAGC	1 cut(s)	602
BsgI	GTGCAG	1 cut(s)	422
Bsh1236I	CGCG	1 cut(s)	123
BshFI	GGCC	6 cut(s)	360, 439, 445, 645, 986, 1034
BshVI	ATCGAT	1 cut(s)	311
BsiHKAI	GWGCWC	1 cut(s)	110
BsiSI	CCGG	4 cut(s)	169, 176, 182, 1094
BslFI	GGGAC	3 cut(s)	83, 1295, 1347
BslI	CCNNNNNNNGG	5 cut(s)	127, 175, 182, 562, 1371
BsmAI	GTCTC	3 cut(s)	233, 338, 573
BsmBI	CGTCTC	1 cut(s)	233
BsmFI	GGGAC	3 cut(s)	83, 1295, 1347
BsmI	GAATGC	1 cut(s)	820
BsnI	GGCC	6 cut(s)	360, 439, 445, 645, 986, 1034
Bso31I	GGTCTC	2 cut(s)	338, 573
Bsp1286I	GDGCHC	3 cut(s)	110, 1117, 1308
Bsp13I	TCCGGA	1 cut(s)	1093
Bsp1407I	TGTACA	1 cut(s)	854
Bsp143I	GATC	3 cut(s)	136, 1141, 1192
Bsp19I	CCATGG	1 cut(s)	348
BspACI	CCGC	5 cut(s)	121, 219, 1057, 1314, 1343
BspANI	GGCC	6 cut(s)	360, 439, 445, 645, 986, 1034
BspDI	ATCGAT	1 cut(s)	311
BspEI	TCCGGA	1 cut(s)	1093
BspFNI	CGCG	1 cut(s)	123
BspLI	GGNNCC	3 cut(s)	180, 340, 698
BspMAI	CTGCAG	1 cut(s)	878
BspMI	ACCTGC	1 cut(s)	1205
BspPI	GGATC	1 cut(s)	1200
BspQI	GCTCTTC	1 cut(s)	414
BspTNI	GGTCTC	2 cut(s)	338, 573
BsrGI	TGTACA	1 cut(s)	854
BsrI	ACTGG	4 cut(s)	145, 652, 897, 952
BssECI	CCNNGG	4 cut(s)	90, 348, 440, 1277
BssMI	GATC	3 cut(s)	136, 1141, 1192
BssNI	GRCGYC	3 cut(s)	60, 72, 245
BssT1I	CCWWGG	2 cut(s)	348, 1277
Bst2UI	CCWGG	2 cut(s)	441, 927
Bst4CI	ACNGT	6 cut(s)	487, 520, 811, 1018, 1310, 1408
Bst6I	CTCTTC	1 cut(s)	414
BstACI	GRCGYC	3 cut(s)	60, 72, 245
BstAUI	TGTACA	1 cut(s)	854
BstBAI	YACGTR	1 cut(s)	267
BstDEI	CTNAG	1 cut(s)	479
BstDSI	CCRYGG	2 cut(s)	90, 348
BstENI	CCTNNNNNAGG	1 cut(s)	560
BstF5I	GGATG	2 cut(s)	790, 1090
BstFNI	CGCG	1 cut(s)	123
BstH2I	RGCGCY	1 cut(s)	90
BstHHI	GCGC	1 cut(s)	89
BstKTI	GATC	3 cut(s)	139, 1144, 1195
BstMAI	GTCTC	3 cut(s)	233, 338, 573
BstMBI	GATC	3 cut(s)	136, 1141, 1192
BstMWI	GCNNNNNNNGC	2 cut(s)	178, 1349
BstNI	CCWGG	2 cut(s)	441, 927
BstSCI	CCNGG	3 cut(s)	181, 439, 925
BstSFI	CTRYAG	2 cut(s)	516, 874
BstSLI	GKGCMC	1 cut(s)	1308
BstUI	CGCG	1 cut(s)	123
BstV1I	GCAGC	3 cut(s)	184, 1339, 1361
BstV2I	GAAGAC	4 cut(s)	3, 39, 93, 1206
BstX2I	RGATCY	1 cut(s)	1192
BstXI	CCANNNNNNTGG	1 cut(s)	91
BstYI	RGATCY	1 cut(s)	1192
Bsu15I	ATCGAT	1 cut(s)	311
BsuRI	GGCC	6 cut(s)	360, 439, 445, 645, 986, 1034
BsuTUI	ATCGAT	1 cut(s)	311
BtgI	CCRYGG	2 cut(s)	90, 348
BtgZI	GCGATG	1 cut(s)	1025
BtrI	CACGTC	2 cut(s)	118, 609
BtsCI	GGATG	2 cut(s)	790, 1090
BtsIMutI	CAGTG	3 cut(s)	659, 904, 1306
BveI	ACCTGC	1 cut(s)	1205
CfoI	GCGC	1 cut(s)	89
Cfr13I	GGNCC	8 cut(s)	200, 270, 339, 359, 443, 929, 974, 984
ClaI	ATCGAT	1 cut(s)	311
CseI	GACGC	3 cut(s)	68, 80, 234
Csp6I	GTAC	6 cut(s)	148, 483, 586, 855, 1019, 1085
CviAII	CATG	5 cut(s)	349, 693, 707, 772, 1299
CviQI	GTAC	6 cut(s)	148, 483, 586, 855, 1019, 1085
DdeI	CTNAG	1 cut(s)	479
DpnI	GATC	3 cut(s)	138, 1143, 1194
DpnII	GATC	3 cut(s)	136, 1141, 1192
DriI	GACNNNNNGTC	1 cut(s)	268
Eam1104I	CTCTTC	1 cut(s)	414
Eam1105I	GACNNNNNGTC	1 cut(s)	268
EarI	CTCTTC	1 cut(s)	414
Eco130I	CCWWGG	2 cut(s)	348, 1277
Eco147I	AGGCCT	2 cut(s)	439, 645
Eco24I	GRGCYC	1 cut(s)	1117
Eco31I	GGTCTC	2 cut(s)	338, 573
Eco47I	GGWCC	5 cut(s)	200, 270, 339, 929, 974
Eco72I	CACGTG	1 cut(s)	267
EcoNI	CCTNNNNNAGG	1 cut(s)	560
EcoRII	CCWGG	2 cut(s)	439, 925
EcoT14I	CCWWGG	2 cut(s)	348, 1277
EcoT38I	GRGCYC	1 cut(s)	1117
ErhI	CCWWGG	2 cut(s)	348, 1277
Esp3I	CGTCTC	1 cut(s)	233
FaeI	CATG	5 cut(s)	352, 696, 710, 775, 1302
FalI	AAGNNNNNCTT	2 cut(s)	630, 662
FaqI	GGGAC	3 cut(s)	83, 1295, 1347
FatI	CATG	5 cut(s)	348, 692, 706, 771, 1298
FauNDI	CATATG	1 cut(s)	970
FbaI	TGATCA	1 cut(s)	1141
FblI	GTMKAC	1 cut(s)	333
Fnu4HI	GCNGC	5 cut(s)	173, 220, 1314, 1350, 1353
FokI	GGATG	2 cut(s)	797, 1077
FriOI	GRGCYC	1 cut(s)	1117
Fsp4HI	GCNGC	5 cut(s)	173, 220, 1314, 1350, 1353
FspBI	CTAG	3 cut(s)	435, 834, 1278
GlaI	GCGC	1 cut(s)	88
GluI	GCNGC	5 cut(s)	173, 220, 1314, 1350, 1353
GsaI	CCCAGC	1 cut(s)	606
HaeII	RGCGCY	1 cut(s)	90
HaeIII	GGCC	6 cut(s)	360, 439, 445, 645, 986, 1034
HapII	CCGG	4 cut(s)	169, 176, 182, 1094
HgaI	GACGC	3 cut(s)	68, 80, 234
HhaI	GCGC	1 cut(s)	89
Hin1I	GRCGYC	3 cut(s)	60, 72, 245
Hin1II	CATG	5 cut(s)	352, 696, 710, 775, 1302
Hin6I	GCGC	1 cut(s)	87
HinP1I	GCGC	1 cut(s)	87
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HinfI	GANTC	8 cut(s)	8, 186, 213, 253, 330, 373, 721, 1169
HpaII	CCGG	4 cut(s)	169, 176, 182, 1094
HphI	GGTGA	4 cut(s)	283, 823, 1241, 1402
Hpy166II	GTNNAC	3 cut(s)	190, 334, 855
Hpy188I	TCNGA	5 cut(s)	200, 343, 502, 1103, 1374
Hpy188III	TCNNGA	6 cut(s)	257, 932, 1045, 1094, 1196, 1223
Hpy8I	GTNNAC	3 cut(s)	190, 334, 855
Hpy99I	CGWCG	2 cut(s)	128, 1251
HpyAV	CCTTC	6 cut(s)	213, 304, 406, 635, 1045, 1381
HpyCH4III	ACNGT	6 cut(s)	487, 520, 811, 1018, 1310, 1408
HpyCH4IV	ACGT	4 cut(s)	117, 266, 608, 869
HpyCH4V	TGCA	5 cut(s)	276, 382, 403, 876, 1259
HpyF10VI	GCNNNNNNNGC	2 cut(s)	178, 1349
HpyF3I	CTNAG	1 cut(s)	479
HpySE526I	ACGT	4 cut(s)	117, 266, 608, 869
Hsp92I	GRCGYC	3 cut(s)	60, 72, 245
Hsp92II	CATG	5 cut(s)	352, 696, 710, 775, 1302
HspAI	GCGC	1 cut(s)	87
Kpn2I	TCCGGA	1 cut(s)	1093
Ksp22I	TGATCA	1 cut(s)	1141
Kzo9I	GATC	3 cut(s)	136, 1141, 1192
LguI	GCTCTTC	1 cut(s)	414
LmnI	GCTCC	3 cut(s)	178, 352, 1279
Lsp1109I	GCAGC	3 cut(s)	184, 1339, 1361
LweI	GCATC	4 cut(s)	285, 1014, 1099, 1261
MaeI	CTAG	3 cut(s)	435, 834, 1278
MaeII	ACGT	4 cut(s)	117, 266, 608, 869
MaeIII	GTNAC	4 cut(s)	749, 767, 1061, 1235
MalI	GATC	3 cut(s)	138, 1143, 1194
MboI	GATC	3 cut(s)	136, 1141, 1192
MflI	RGATCY	1 cut(s)	1192
MhlI	GDGCHC	3 cut(s)	110, 1117, 1308
MluCI	AATT	5 cut(s)	163, 493, 624, 797, 1260
MlyI	GAGTC	4 cut(s)	17, 195, 222, 339
MmeI	TCCRAC	1 cut(s)	1352
MroI	TCCGGA	1 cut(s)	1093
MroXI	GAANNNNTTC	1 cut(s)	1052
MseI	TTAA	1 cut(s)	800
MslI	CAYNNNNRTG	3 cut(s)	398, 691, 711
MspA1I	CMGCKG	3 cut(s)	527, 1059, 1352
MspI	CCGG	4 cut(s)	169, 176, 182, 1094
MspR9I	CCNGG	3 cut(s)	183, 441, 927
Mva1269I	GAATGC	1 cut(s)	820
MvaI	CCWGG	2 cut(s)	441, 927
MvnI	CGCG	1 cut(s)	123
MwoI	GCNNNNNNNGC	2 cut(s)	178, 1349
NciI	CCSGG	1 cut(s)	183
NcoI	CCATGG	1 cut(s)	348
NdeI	CATATG	1 cut(s)	970
NdeII	GATC	3 cut(s)	136, 1141, 1192
NlaIII	CATG	5 cut(s)	352, 696, 710, 775, 1302
NlaIV	GGNNCC	3 cut(s)	180, 340, 698
PceI	AGGCCT	2 cut(s)	439, 645
PciSI	GCTCTTC	1 cut(s)	414
PcsI	WCGNNNNNNNCGW	3 cut(s)	123, 132, 605
PctI	GAATGC	1 cut(s)	820
PdmI	GAANNNNTTC	1 cut(s)	1052
PfeI	GAWTC	4 cut(s)	253, 373, 721, 1169
PflFI	GACNNNGTC	1 cut(s)	244
PkrI	GCNGC	5 cut(s)	174, 221, 1315, 1351, 1354
PleI	GAGTC	4 cut(s)	16, 194, 221, 338
PmaCI	CACGTG	1 cut(s)	267
PmlI	CACGTG	1 cut(s)	267
PpsI	GAGTC	4 cut(s)	16, 194, 221, 338
Ppu21I	YACGTR	1 cut(s)	267
PsiI	TTATAA	1 cut(s)	623
Psp6I	CCWGG	2 cut(s)	439, 925
PspCI	CACGTG	1 cut(s)	267
PspFI	CCCAGC	1 cut(s)	602
PspGI	CCWGG	2 cut(s)	439, 925
PspN4I	GGNNCC	3 cut(s)	180, 340, 698
PspPI	GGNCC	8 cut(s)	200, 270, 339, 359, 443, 929, 974, 984
PstI	CTGCAG	1 cut(s)	878
PsuI	RGATCY	1 cut(s)	1192
PsyI	GACNNNGTC	1 cut(s)	244
PvuII	CAGCTG	2 cut(s)	527, 1352
RsaI	GTAC	6 cut(s)	149, 484, 587, 856, 1020, 1086
RsaNI	GTAC	6 cut(s)	148, 483, 586, 855, 1019, 1085
RseI	CAYNNNNRTG	3 cut(s)	398, 691, 711
SapI	GCTCTTC	1 cut(s)	414
SaqAI	TTAA	1 cut(s)	800
SatI	GCNGC	5 cut(s)	173, 220, 1314, 1350, 1353
Sau3AI	GATC	3 cut(s)	136, 1141, 1192
Sau96I	GGNCC	8 cut(s)	200, 270, 339, 359, 443, 929, 974, 984
ScaI	AGTACT	1 cut(s)	484
SchI	GAGTC	4 cut(s)	17, 195, 222, 339
ScrFI	CCNGG	3 cut(s)	183, 441, 927
SduI	GDGCHC	3 cut(s)	110, 1117, 1308
SfaNI	GCATC	4 cut(s)	285, 1014, 1099, 1261
SfcI	CTRYAG	2 cut(s)	516, 874
SinI	GGWCC	5 cut(s)	200, 270, 339, 929, 974
SmiMI	CAYNNNNRTG	3 cut(s)	398, 691, 711
SmlI	CTYRAG	1 cut(s)	630
SmoI	CTYRAG	1 cut(s)	630
SpeI	ACTAGT	1 cut(s)	833
Sse9I	AATT	5 cut(s)	163, 493, 624, 797, 1260
SseBI	AGGCCT	2 cut(s)	439, 645
SsiI	CCGC	5 cut(s)	121, 219, 1057, 1314, 1343
SspMI	CTAG	3 cut(s)	435, 834, 1278
StuI	AGGCCT	2 cut(s)	439, 645
StyD4I	CCNGG	3 cut(s)	181, 439, 925
StyI	CCWWGG	2 cut(s)	348, 1277
TaaI	ACNGT	6 cut(s)	487, 520, 811, 1018, 1310, 1408
TaiI	ACGT	4 cut(s)	120, 269, 611, 872
TaqI	TCGA	7 cut(s)	53, 104, 234, 256, 311, 371, 1178
TasI	AATT	5 cut(s)	163, 493, 624, 797, 1260
TatI	WGTACW	4 cut(s)	482, 854, 1018, 1084
TauI	GCSGC	2 cut(s)	222, 1316
TfiI	GAWTC	4 cut(s)	253, 373, 721, 1169
Tru1I	TTAA	1 cut(s)	800
Tru9I	TTAA	1 cut(s)	800
TscAI	CASTG	3 cut(s)	659, 904, 1313
TseI	GCWGC	3 cut(s)	172, 1349, 1352
TspDTI	ATGAA	6 cut(s)	425, 524, 695, 788, 1116, 1149
TspGWI	ACGGA	1 cut(s)	33
TspRI	CASTG	3 cut(s)	659, 904, 1313
Tth111I	GACNNNGTC	1 cut(s)	244
VpaK11BI	GGWCC	5 cut(s)	200, 270, 339, 929, 974
XagI	CCTNNNNNAGG	1 cut(s)	560
XmaJI	CCTAGG	1 cut(s)	1277
XmiI	GTMKAC	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	1052
XspI	CTAG	3 cut(s)	435, 834, 1278
ZrmI	AGTACT	1 cut(s)	484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.