Prupe.6G277400_v2.0.a1

Domain of unknown function (DUF4793)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
26066312 .. 26070306
3995 bp
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UTR
Exon/CDS
Intron
Prupe.6G277400.1

Sequence Viewer

Length: 1416 bp
ATGGAAGAACCATCTTCTTCTTCCTCCTCCTCATCTTCTTCTCACGGTGCTTTCATCAGTAGGGACACTTCAGGTGCTGCAGCCACGTCGTCTTCGAGCGCTTCGCAGGTCCGCGAGGAGGAGGACGATCACAATCAGTATCAGCAGCACACCGATTTTCGGCATCCGGAGGTTGAAACCCACGAAATCGGCACTTCTTATGGAGCAAACCTGTCGCCATTCGATGAGGTGTCAACAATCATTAGGGACGACACGTGGTCCTGCATCATCGTCCTCCTCACCTTCTGGTTCTTTGTTTCCATGACTTTGATTTTGGGAGTGTATGGGTCTTCAAGTTTAGAGCTAGGCCCTAATAGTTCAATTCTTCTGCAACCTAGCCCCATATTTGTGCAGTCTGTAAAGGTAGAAGAGCTGAATATATCAAGTCCTGGTCCTGTACTATATGGTTTCTATAATACTCCTCCTCTTGATACTGAGACAACTTGGTCAGAAACGCATACTGTCTCTGTTCCAGCTGATTCTCATCAGGAGTGGATATATTTCCTAAATGGGGGGTCTCAAATAAGTATATCATACAGCGTGTACTCCTCTGTTTTTCTTATTATCGCTCAAGGTAAAGAAGGCCTCGCTCAATGGCTTGAAGAACCGACATATCCTAATACTACTTTATCATGGAACCTCATTCATGGAAGTGGTATGATTGAGCAGGACATATCAAAGTCTTCCAGTTACTATGTTTCTGTGGGTAACTTGAACACAGAGGATGTGGAGGTGCAATTGAACTTCACAGTGAATGCTTTATTGTACAATACAAGTGCAGCTTATTACAAGTGTTCTTTCAAGGATGCATCCTGTAGTTTGAAAATTTTGTTTCCCAATGGAAATGCAGCTGTATTAACCTCTCCTGGTCCAGAGCAGGATATACCTAATGCAAACCAGTATGTCAAACTGTCTTATGGACCGAGATGGGCCACTTATATTGTTGGTATAGGTGGGATGACTGTACTCATGTTAGTGGCCTTCAACTTCTTGAACAAGTTCCGATGTACCAATGAAGATGGAATAAGAGTACAACAGGAGGATTTCAGATCTGAGAGAGGCCCATTGCTTTCATACAAAGATGAGGATCAATCAAGTTGGGGTTCATCGTATGACTCTGCCTCGAATGATGAGGGGGGTCTTGAAGACTTTCTGGCAGCAGGTTCTCTTGAAGGGAAGTCAGTAAGAGATGGTGAAAGTAATAATACTCGTCGTCTTTGTGCAATTTGTTTTGATGCTCCTAGGGACTGCTTTTTCCTTCCCTGTGGGCACTGTGTGGCTTGTTTCGATTGCGCAACAAGGATAGCGGAGGCAGCTGCTACTTGTCCAATTTGTCGTAGAAACATAAAGAAGGTGAGGAAGATTTTTACAGTTTAA

Protein Analysis

472

Amino Acids

51.81

Weight (kDa)

4.67

Isoelectric Point (pI)

49.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 484
Acc16I TGCGCA 1 cut(s) 1333
Acc36I ACCTGC 2 cut(s) 97, 1190
AccII CGCG 1 cut(s) 114
AccIII TCCGGA 1 cut(s) 166
AciI CCGC 2 cut(s) 112, 1346
AclWI GGATC 1 cut(s) 1134
AcsI RAATTY 1 cut(s) 864
AcuI CTGAAG 1 cut(s) 54
AcvI CACGTG 1 cut(s) 255
AdeI CACNNNGTG 1 cut(s) 1315
AfaI GTAC 6 cut(s) 438, 584, 806, 1005, 1048, 1071
AfeI AGCGCT 1 cut(s) 100
AfiI CCNNNNNNNGG 3 cut(s) 118, 159, 550
AflIII ACRYGT 1 cut(s) 252
AhdI GACNNNNNGTC 1 cut(s) 256
AjiI CACGTC 1 cut(s) 87
AjnI CCWGG 2 cut(s) 427, 904
AluBI AGCT 6 cut(s) 343, 412, 515, 821, 890, 1355
AluI AGCT 6 cut(s) 343, 412, 515, 821, 890, 1355
Alw26I GTCTC 3 cut(s) 470, 508, 561
AlwI GGATC 1 cut(s) 1134
AlwNI CAGNNNCTG 1 cut(s) 77
Aor13HI TCCGGA 1 cut(s) 166
Aor51HI AGCGCT 1 cut(s) 100
AoxI GGCC 5 cut(s) 346, 622, 969, 1017, 1099
ApeKI GCWGC 8 cut(s) 77, 80, 145, 818, 887, 1196, 1352, 1355
ApoI RAATTY 1 cut(s) 864
ArsI GACNNNNNNTTYG 2 cut(s) 295, 327
Asp700I GAANNNNTTC 2 cut(s) 1037, 1188
AspA2I CCTAGG 1 cut(s) 1280
AspLEI GCGC 2 cut(s) 101, 1334
AspS9I GGNCC 8 cut(s) 109, 258, 347, 431, 908, 959, 969, 1100
AsuHPI GGTGA 3 cut(s) 271, 1244, 1405
AvaII GGWCC 5 cut(s) 109, 258, 431, 908, 959
AvrII CCTAGG 1 cut(s) 1280
BaeGI GKGCMC 1 cut(s) 1311
BarI GAAGNNNNNNTAC 2 cut(s) 52, 84
BbrPI CACGTG 1 cut(s) 255
BbsI GAAGAC 4 cut(s) 84, 321, 714, 1191
BbvI GCAGC 8 cut(s) 64, 92, 157, 830, 899, 1208, 1342, 1364
BccI CCATC 4 cut(s) 19, 960, 1052, 1223
BcgI CGANNNNNNTGC 4 cut(s) 69, 103, 195, 229
BciT130I CCWGG 2 cut(s) 429, 906
BcoDI GTCTC 3 cut(s) 470, 508, 561
BfaI CTAG 3 cut(s) 344, 375, 1281
BfmI CTRYAG 2 cut(s) 78, 853
BfoI RGCGCY 1 cut(s) 102
BfuAI ACCTGC 2 cut(s) 97, 1190
BglII AGATCT 1 cut(s) 1088
BisI GCNGC 8 cut(s) 78, 81, 146, 819, 888, 1197, 1353, 1356
BlnI CCTAGG 1 cut(s) 1280
BlsI GCNGC 8 cut(s) 79, 82, 147, 820, 889, 1198, 1354, 1357
Bme1390I CCNGG 2 cut(s) 429, 906
Bme18I GGWCC 5 cut(s) 109, 258, 431, 908, 959
BmeRI GACNNNNNGTC 1 cut(s) 256
BmgBI CACGTC 1 cut(s) 87
BmgT120I GGNCC 8 cut(s) 109, 258, 347, 431, 908, 959, 969, 1100
BmiI GGNNCC 1 cut(s) 677
BmrFI CCNGG 2 cut(s) 429, 906
BmsI GCATC 5 cut(s) 172, 273, 835, 857, 1264
BpiI GAAGAC 4 cut(s) 84, 321, 714, 1191
BpuEI CTTGAG 1 cut(s) 594
BsaAI YACGTR 1 cut(s) 255
BsaBI GATNNNNATC 3 cut(s) 132, 522, 1125
BsaI GGTCTC 1 cut(s) 561
BsaJI CCNNGG 1 cut(s) 1280
BsaWI WCCGGW 1 cut(s) 166
Bsc4I CCNNNNNNNGG 3 cut(s) 118, 159, 550
Bse1I ACTGG 2 cut(s) 726, 937
Bse3DI GCAATG 1 cut(s) 1103
Bse8I GATNNNNATC 3 cut(s) 132, 522, 1125
BseAI TCCGGA 1 cut(s) 166
BseBI CCWGG 2 cut(s) 429, 906
BseDI CCNNGG 1 cut(s) 1280
BseGI GGATG 5 cut(s) 163, 769, 848, 850, 1002
BseJI GATNNNNATC 3 cut(s) 132, 522, 1125
BseLI CCNNNNNNNGG 3 cut(s) 118, 159, 550
BseMI GCAATG 1 cut(s) 1103
BseMII CTCAG 2 cut(s) 465, 1083
BseNI ACTGG 2 cut(s) 726, 937
BseRI GAGGAG 8 cut(s) 16, 19, 131, 134, 266, 450, 453, 577
BseSI GKGCMC 1 cut(s) 1311
BseXI GCAGC 8 cut(s) 64, 92, 157, 830, 899, 1208, 1342, 1364
BsgI GTGCAG 2 cut(s) 410, 837
Bsh1236I CGCG 1 cut(s) 114
BshFI GGCC 5 cut(s) 348, 624, 971, 1019, 1101
BsiSI CCGG 1 cut(s) 167
BslFI GGGAC 3 cut(s) 77, 260, 1298
BslI CCNNNNNNNGG 3 cut(s) 118, 159, 550
BsmAI GTCTC 3 cut(s) 470, 508, 561
BsmFI GGGAC 3 cut(s) 77, 260, 1298
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 5 cut(s) 348, 624, 971, 1019, 1101
Bso31I GGTCTC 1 cut(s) 561
Bsp1286I GDGCHC 1 cut(s) 1311
Bsp13I TCCGGA 1 cut(s) 166
Bsp1407I TGTACA 1 cut(s) 804
Bsp143I GATC 3 cut(s) 127, 1088, 1126
BspACI CCGC 2 cut(s) 112, 1346
BspANI GGCC 5 cut(s) 348, 624, 971, 1019, 1101
BspCNI CTCAG 2 cut(s) 466, 1084
BspEI TCCGGA 1 cut(s) 166
BspFNI CGCG 1 cut(s) 114
BspLI GGNNCC 1 cut(s) 677
BspMAI CTGCAG 1 cut(s) 82
BspMI ACCTGC 2 cut(s) 97, 1190
BspPI GGATC 1 cut(s) 1134
BspQI GCTCTTC 1 cut(s) 402
BspTNI GGTCTC 1 cut(s) 561
BsrDI GCAATG 1 cut(s) 1103
BsrGI TGTACA 1 cut(s) 804
BsrI ACTGG 2 cut(s) 726, 937
BssECI CCNNGG 1 cut(s) 1280
BssMI GATC 3 cut(s) 127, 1088, 1126
BssT1I CCWWGG 1 cut(s) 1280
Bst2UI CCWGG 2 cut(s) 429, 906
Bst4CI ACNGT 7 cut(s) 47, 502, 790, 951, 1003, 1313, 1411
Bst6I CTCTTC 1 cut(s) 402
BstAUI TGTACA 1 cut(s) 804
BstBAI YACGTR 1 cut(s) 255
BstDEI CTNAG 2 cut(s) 474, 1092
BstF5I GGATG 5 cut(s) 163, 769, 848, 850, 1002
BstFNI CGCG 1 cut(s) 114
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 2 cut(s) 101, 1334
BstKTI GATC 3 cut(s) 130, 1091, 1129
BstMAI GTCTC 3 cut(s) 470, 508, 561
BstMBI GATC 3 cut(s) 127, 1088, 1126
BstMWI GCNNNNNNNGC 1 cut(s) 1352
BstNI CCWGG 2 cut(s) 429, 906
BstSCI CCNGG 2 cut(s) 427, 904
BstSFI CTRYAG 2 cut(s) 78, 853
BstSLI GKGCMC 1 cut(s) 1311
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 8 cut(s) 64, 92, 157, 830, 899, 1208, 1342, 1364
BstV2I GAAGAC 4 cut(s) 84, 321, 714, 1191
BstX2I RGATCY 1 cut(s) 1088
BstYI RGATCY 1 cut(s) 1088
BsuRI GGCC 5 cut(s) 348, 624, 971, 1019, 1101
BtrI CACGTC 1 cut(s) 87
BtsCI GGATG 5 cut(s) 163, 769, 848, 850, 1002
BtsIMutI CAGTG 2 cut(s) 795, 1309
BveI ACCTGC 2 cut(s) 97, 1190
CaiI CAGNNNCTG 1 cut(s) 77
CfoI GCGC 2 cut(s) 101, 1334
Cfr13I GGNCC 8 cut(s) 109, 258, 347, 431, 908, 959, 969, 1100
Csp6I GTAC 6 cut(s) 437, 583, 805, 1004, 1047, 1070
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviAII CATG 4 cut(s) 301, 672, 686, 1009
CviQI GTAC 6 cut(s) 437, 583, 805, 1004, 1047, 1070
DdeI CTNAG 2 cut(s) 474, 1092
DpnI GATC 3 cut(s) 129, 1090, 1128
DpnII GATC 3 cut(s) 127, 1088, 1126
DraIII CACNNNGTG 1 cut(s) 1315
DrdI GACNNNNNNGTC 1 cut(s) 484
DriI GACNNNNNGTC 1 cut(s) 256
DseDI GACNNNNNNGTC 1 cut(s) 484
Eam1104I CTCTTC 1 cut(s) 402
Eam1105I GACNNNNNGTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 402
Eco130I CCWWGG 1 cut(s) 1280
Eco147I AGGCCT 1 cut(s) 624
Eco31I GGTCTC 1 cut(s) 561
Eco47I GGWCC 5 cut(s) 109, 258, 431, 908, 959
Eco47III AGCGCT 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 54
Eco72I CACGTG 1 cut(s) 255
EcoO109I RGGNCCY 1 cut(s) 347
EcoRII CCWGG 2 cut(s) 427, 904
EcoT14I CCWWGG 1 cut(s) 1280
EcoT22I ATGCAT 1 cut(s) 850
ErhI CCWWGG 1 cut(s) 1280
FaeI CATG 4 cut(s) 304, 675, 689, 1012
FalI AAGNNNNNCTT 2 cut(s) 805, 837
FaqI GGGAC 3 cut(s) 77, 260, 1298
FatI CATG 4 cut(s) 300, 671, 685, 1008
Fnu4HI GCNGC 8 cut(s) 78, 81, 146, 819, 888, 1197, 1353, 1356
FokI GGATG 5 cut(s) 150, 776, 835, 857, 1009
Fsp4HI GCNGC 8 cut(s) 78, 81, 146, 819, 888, 1197, 1353, 1356
FspBI CTAG 3 cut(s) 344, 375, 1281
FspI TGCGCA 1 cut(s) 1333
GlaI GCGC 2 cut(s) 100, 1333
GluI GCNGC 8 cut(s) 78, 81, 146, 819, 888, 1197, 1353, 1356
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 5 cut(s) 348, 624, 971, 1019, 1101
HapII CCGG 1 cut(s) 167
HhaI GCGC 2 cut(s) 101, 1334
Hin1II CATG 4 cut(s) 304, 675, 689, 1012
Hin6I GCGC 2 cut(s) 99, 1332
HinP1I GCGC 2 cut(s) 99, 1332
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
HinfI GANTC 2 cut(s) 518, 1154
HpaII CCGG 1 cut(s) 167
HphI GGTGA 3 cut(s) 271, 1244, 1405
Hpy166II GTNNAC 2 cut(s) 234, 583
Hpy188I TCNGA 4 cut(s) 490, 1043, 1088, 1093
Hpy188III TCNNGA 7 cut(s) 167, 467, 527, 911, 1030, 1181, 1208
Hpy8I GTNNAC 2 cut(s) 234, 583
Hpy99I CGWCG 2 cut(s) 91, 1254
HpyAV CCTTC 6 cut(s) 292, 614, 1030, 1205, 1307, 1384
HpyCH4III ACNGT 7 cut(s) 47, 502, 790, 951, 1003, 1313, 1411
HpyCH4IV ACGT 2 cut(s) 86, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 1352
HpyF3I CTNAG 2 cut(s) 474, 1092
HpySE526I ACGT 2 cut(s) 86, 254
Hsp92II CATG 4 cut(s) 304, 675, 689, 1012
HspAI GCGC 2 cut(s) 99, 1332
Kpn2I TCCGGA 1 cut(s) 166
Kzo9I GATC 3 cut(s) 127, 1088, 1126
LguI GCTCTTC 1 cut(s) 402
LmnI GCTCC 2 cut(s) 203, 1282
Lsp1109I GCAGC 8 cut(s) 64, 92, 157, 830, 899, 1208, 1342, 1364
LweI GCATC 5 cut(s) 172, 273, 835, 857, 1264
MaeI CTAG 3 cut(s) 344, 375, 1281
MaeII ACGT 2 cut(s) 86, 254
MaeIII GTNAC 2 cut(s) 728, 746
MalI GATC 3 cut(s) 129, 1090, 1128
MboI GATC 3 cut(s) 127, 1088, 1126
MfeI CAATTG 1 cut(s) 776
MflI RGATCY 1 cut(s) 1088
MhlI GDGCHC 1 cut(s) 1311
MluCI AATT 5 cut(s) 360, 776, 864, 1263, 1368
MlyI GAGTC 1 cut(s) 1148
Mph1103I ATGCAT 1 cut(s) 850
MroI TCCGGA 1 cut(s) 166
MroXI GAANNNNTTC 2 cut(s) 1037, 1188
MseI TTAA 2 cut(s) 896, 1414
MslI CAYNNNNRTG 3 cut(s) 386, 690, 1013
MspA1I CMGCKG 3 cut(s) 515, 890, 1355
MspI CCGG 1 cut(s) 167
MspR9I CCNGG 2 cut(s) 429, 906
MunI CAATTG 1 cut(s) 776
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 2 cut(s) 429, 906
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 1 cut(s) 1352
NdeII GATC 3 cut(s) 127, 1088, 1126
NlaIII CATG 4 cut(s) 304, 675, 689, 1012
NlaIV GGNNCC 1 cut(s) 677
NsbI TGCGCA 1 cut(s) 1333
NsiI ATGCAT 1 cut(s) 850
PceI AGGCCT 1 cut(s) 624
PciSI GCTCTTC 1 cut(s) 402
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 799
PdmI GAANNNNTTC 2 cut(s) 1037, 1188
PfeI GAWTC 1 cut(s) 518
PkrI GCNGC 8 cut(s) 79, 82, 147, 820, 889, 1198, 1354, 1357
PleI GAGTC 1 cut(s) 1148
PmaCI CACGTG 1 cut(s) 255
PmlI CACGTG 1 cut(s) 255
PpsI GAGTC 1 cut(s) 1148
Ppu21I YACGTR 1 cut(s) 255
Psp6I CCWGG 2 cut(s) 427, 904
PspCI CACGTG 1 cut(s) 255
PspGI CCWGG 2 cut(s) 427, 904
PspN4I GGNNCC 1 cut(s) 677
PspPI GGNCC 8 cut(s) 109, 258, 347, 431, 908, 959, 969, 1100
PstI CTGCAG 1 cut(s) 82
PstNI CAGNNNCTG 1 cut(s) 77
PsuI RGATCY 1 cut(s) 1088
PvuII CAGCTG 3 cut(s) 515, 890, 1355
RsaI GTAC 6 cut(s) 438, 584, 806, 1005, 1048, 1071
RsaNI GTAC 6 cut(s) 437, 583, 805, 1004, 1047, 1070
RseI CAYNNNNRTG 3 cut(s) 386, 690, 1013
SapI GCTCTTC 1 cut(s) 402
SaqAI TTAA 2 cut(s) 896, 1414
SatI GCNGC 8 cut(s) 78, 81, 146, 819, 888, 1197, 1353, 1356
Sau3AI GATC 3 cut(s) 127, 1088, 1126
Sau96I GGNCC 8 cut(s) 109, 258, 347, 431, 908, 959, 969, 1100
SchI GAGTC 1 cut(s) 1148
ScrFI CCNGG 2 cut(s) 429, 906
SduI GDGCHC 1 cut(s) 1311
SfaNI GCATC 5 cut(s) 172, 273, 835, 857, 1264
SfcI CTRYAG 2 cut(s) 78, 853
SinI GGWCC 5 cut(s) 109, 258, 431, 908, 959
SmiMI CAYNNNNRTG 3 cut(s) 386, 690, 1013
SmlI CTYRAG 1 cut(s) 609
SmoI CTYRAG 1 cut(s) 609
Sse9I AATT 5 cut(s) 360, 776, 864, 1263, 1368
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 2 cut(s) 112, 1346
SspMI CTAG 3 cut(s) 344, 375, 1281
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 2 cut(s) 427, 904
StyI CCWWGG 1 cut(s) 1280
TaaI ACNGT 7 cut(s) 47, 502, 790, 951, 1003, 1313, 1411
TaiI ACGT 2 cut(s) 89, 257
TaqI TCGA 4 cut(s) 95, 222, 1163, 1326
TaqII GACCGA 1 cut(s) 976
TasI AATT 5 cut(s) 360, 776, 864, 1263, 1368
TatI WGTACW 5 cut(s) 436, 582, 804, 1003, 1069
TfiI GAWTC 1 cut(s) 518
Tru1I TTAA 2 cut(s) 896, 1414
Tru9I TTAA 2 cut(s) 896, 1414
TscAI CASTG 2 cut(s) 795, 1316
TseI GCWGC 8 cut(s) 77, 80, 145, 818, 887, 1196, 1352, 1355
TspDTI ATGAA 5 cut(s) 43, 674, 1068, 1101, 1134
TspRI CASTG 2 cut(s) 795, 1316
VpaK11BI GGWCC 5 cut(s) 109, 258, 431, 908, 959
XapI RAATTY 1 cut(s) 864
XmaJI CCTAGG 1 cut(s) 1280
XmnI GAANNNNTTC 2 cut(s) 1037, 1188
XspI CTAG 3 cut(s) 344, 375, 1281
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.