FvH4_6g16230

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
10221913 .. 10224864
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g16230.t1

Sequence Viewer

Length: 1473 bp
ATGGAGAACAATCACTCAAAGCCTCATGCTGTTCTATTTTCCTACCCTCTCCAAGGCCATGTAATCCCAGCAGTCCATCTCGCAATCAAGCTCGCATCAAACGGTTTCACAGTCACCTTTGTCAACACTCGGGCAGTTCACCACCAAATAATCAAGTCCCAAAGTCTCGATACCCCCTCAGAAGACGTTAACATCTTCGACGGGGTGTGTAAATCGAGCCTCGACATACGTTATGTAACGATCAGTGATGGTTTTCCTATCGGATTCGATCGATCCCTCAACCACGACCAGTTTTGGGAAGGTGTCCTGCATGATTTCCCAGCTCATGTGGATGAACTTGTAGCAGAACTAGTCAGATCCGACCCACCGGTCACCTGCTTGATAGCGGACACTTTCTTTGTGTGGCCAACAATGATAGCAGCAAAGTATAACCTTGTGAACGTGTCATTTTGGACTGAACCAGTTCTGGTCTTAACCCTCTACTACCATATATACCTCCTCAGAGAAAATGGTCACTTTGCTTCTCCTGGTAATCATCGGCAAGATACAATCGACTACATTCCAGGTGTGAAAGCAATTGAACCAAAAGACTTGATGTCATACCTTCAAGCAACTGATGTCACATCCGTAGTTCACAGGATCATATTCAAGGCATTTGAGGAAGTTAAAAGGGCAGATTTCATTCTTTGTAACACAATTCAAGAGCTTGAATCAGGTACCATATCTGCCTTTCAAGAAAAGCAACCTACCTATGCAATTGGCCCTATTTTCCCCAATGGATTCACGAAGAGCACCGTGGCCACGAGCCTCTGGTCCGAATTTGACTGCATCGAATGGCTCAACACTAAACCGGATGGCTCAATTCTCTATGTCTCATTTGGTAGCTATGCACACGCTAGCAAAAGAGACATAGAGGAAATAGCCAACGGGCTTTTGCTAAGCAAAGTCGGCTTCATTTGGGTTCTTCGACCTGATATTGTCAGCTCCAATGAGACCCAAATCCTACCCGTCGGATTCGAAGATGAGATCAAAAATCGAGGGTTGATTGTGTCATGGTGTAGTCAAATTGAAGTCATCTCACACCCTGCAATTGGAGGATTCTTAACACATTGTGGATGGAACTCCATATTGGAAAGTATGTGGCGCGGCCTCCCATTGTTGTGCTATCCATTGTTGACTGACCAATTCACCAATCGGAAACTAGTCGTCGATGATTGGAAGGTGGGGATTAACCTTTGTGATCGGAAATCGATCACAGAGGAGGAGGTGAAAGAGAAGGTGAACAGTTTGATGAGTGGAAAGTCAAGTGAGGAATTGAGGAGGAATGCCAGGAAGGTCAAGAACACATTGGAGAGTGCGTTGGATAAAGATGGTTCATCAAATGGAAACTTTGTTCGATTCATAGATGATGTGAAGGCTAAAATCCAAGAGAAACATGGGCTTAGCTTCAAAGACTTCAATGTCAATCACTAG
Functional Annotation

Protein Analysis

491

Amino Acids

55.26

Weight (kDa)

5.7

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 280 - 436 7.4e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 383
AasI GACNNNNNNGTC 2 cut(s) 368, 1460
Acc36I ACCTGC 1 cut(s) 383
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 716
AccII CGCG 1 cut(s) 1146
AciI CCGC 2 cut(s) 386, 1146
AclWI GGATC 3 cut(s) 267, 351, 647
AcoI YGGCCR 2 cut(s) 404, 798
AcsI RAATTY 1 cut(s) 818
AdeI CACNNNGTG 1 cut(s) 1112
AfaI GTAC 1 cut(s) 718
AfiI CCNNNNNNNGG 3 cut(s) 53, 295, 1091
AflIII ACRYGT 1 cut(s) 441
AgeI ACCGGT 1 cut(s) 367
AgsI TTSAA 9 cut(s) 581, 608, 649, 701, 710, 734, 1070, 1450, 1459
AhdI GACNNNNNGTC 1 cut(s) 595
AhlI ACTAGT 2 cut(s) 349, 1201
AjnI CCWGG 3 cut(s) 526, 562, 1328
AjuI GAANNNNNNNTTGG 2 cut(s) 1112, 1144
AloI GAACNNNNNNTCC 2 cut(s) 1377, 1409
AluBI AGCT 6 cut(s) 91, 323, 706, 885, 984, 1446
AluI AGCT 6 cut(s) 91, 323, 706, 885, 984, 1446
Alw21I GWGCWC 1 cut(s) 794
Alw26I GTCTC 4 cut(s) 170, 877, 900, 986
AlwI GGATC 3 cut(s) 267, 351, 647
Ama87I CYCGRG 1 cut(s) 129
AoxI GGCC 5 cut(s) 55, 404, 760, 798, 1147
ApeKI GCWGC 1 cut(s) 419
ApoI RAATTY 1 cut(s) 818
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
AsiGI ACCGGT 1 cut(s) 367
Asp700I GAANNNNTTC 1 cut(s) 462
Asp718I GGTACC 1 cut(s) 716
AspLEI GCGC 1 cut(s) 1146
AspS9I GGNCC 2 cut(s) 761, 813
AsuHPI GGTGA 6 cut(s) 106, 131, 364, 1180, 1279, 1291
AsuII TTCGAA 1 cut(s) 1017
AsuNHI GCTAGC 1 cut(s) 896
AvaI CYCGRG 1 cut(s) 129
AvaII GGWCC 1 cut(s) 813
BalI TGGCCA 2 cut(s) 406, 800
BanI GGYRCC 1 cut(s) 716
BauI CACGAG 1 cut(s) 802
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 794
BbvI GCAGC 1 cut(s) 431
BccI CCATC 5 cut(s) 84, 242, 848, 1110, 1364
BciT130I CCWGG 3 cut(s) 528, 564, 1330
BcoDI GTCTC 4 cut(s) 170, 877, 900, 986
BcuI ACTAGT 2 cut(s) 349, 1201
BfaI CTAG 4 cut(s) 350, 897, 1202, 1471
BfuAI ACCTGC 1 cut(s) 383
BisI GCNGC 2 cut(s) 420, 1147
BlpI GCTNAGC 2 cut(s) 938, 1442
BlsI GCNGC 2 cut(s) 421, 1148
Bme1390I CCNGG 3 cut(s) 528, 564, 1330
Bme18I GGWCC 1 cut(s) 813
BmeRI GACNNNNNGTC 1 cut(s) 595
BmeT110I CYCGRG 1 cut(s) 129
BmgT120I GGNCC 2 cut(s) 761, 813
BmiI GGNNCC 1 cut(s) 718
BmrFI CCNGG 3 cut(s) 528, 564, 1330
BmsI GCATC 2 cut(s) 104, 837
BmtI GCTAGC 1 cut(s) 900
BpiI GAAGAC 1 cut(s) 189
Bpu1102I GCTNAGC 2 cut(s) 938, 1442
Bpu14I TTCGAA 1 cut(s) 1017
Bsa29I ATCGAT 2 cut(s) 271, 1250
BsaI GGTCTC 1 cut(s) 986
BsaJI CCNNGG 2 cut(s) 52, 795
BsaWI WCCGGW 2 cut(s) 367, 850
BsaXI ACNNNNNCTCC 2 cut(s) 1343, 1373
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 295, 1091
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 2 cut(s) 289, 461
BseBI CCWGG 3 cut(s) 528, 564, 1330
BseCI ATCGAT 2 cut(s) 271, 1250
BseDI CCNNGG 2 cut(s) 52, 795
BseGI GGATG 4 cut(s) 337, 623, 859, 1121
BseLI CCNNNNNNNGG 3 cut(s) 53, 295, 1091
BseMII CTCAG 2 cut(s) 192, 514
BseNI ACTGG 2 cut(s) 289, 461
BseRI GAGGAG 4 cut(s) 488, 1274, 1277, 1333
BseXI GCAGC 1 cut(s) 431
BseYI CCCAGC 2 cut(s) 67, 319
Bsh1236I CGCG 1 cut(s) 1146
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 5 cut(s) 57, 406, 762, 800, 1149
BshNI GGYRCC 1 cut(s) 716
BshTI ACCGGT 1 cut(s) 367
BshVI ATCGAT 2 cut(s) 271, 1250
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 1 cut(s) 794
BsiHKCI CYCGRG 1 cut(s) 129
BsiSI CCGG 2 cut(s) 368, 851
BslFI GGGAC 1 cut(s) 142
BslI CCNNNNNNNGG 3 cut(s) 53, 295, 1091
BsmAI GTCTC 4 cut(s) 170, 877, 900, 986
BsmFI GGGAC 1 cut(s) 142
BsmI GAATGC 1 cut(s) 1330
BsnI GGCC 5 cut(s) 57, 406, 762, 800, 1149
Bso31I GGTCTC 1 cut(s) 986
BsoBI CYCGRG 1 cut(s) 129
Bsp119I TTCGAA 1 cut(s) 1017
Bsp1286I GDGCHC 1 cut(s) 794
Bsp143I GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
Bsp1720I GCTNAGC 2 cut(s) 938, 1442
BspACI CCGC 2 cut(s) 386, 1146
BspANI GGCC 5 cut(s) 57, 406, 762, 800, 1149
BspCNI CTCAG 2 cut(s) 191, 513
BspDI ATCGAT 2 cut(s) 271, 1250
BspFNI CGCG 1 cut(s) 1146
BspLI GGNNCC 1 cut(s) 718
BspMI ACCTGC 1 cut(s) 383
BspOI GCTAGC 1 cut(s) 900
BspPI GGATC 3 cut(s) 267, 351, 647
BspQI GCTCTTC 1 cut(s) 782
BspT104I TTCGAA 1 cut(s) 1017
BspT107I GGYRCC 1 cut(s) 716
BspTNI GGTCTC 1 cut(s) 986
BsrFI RCCGGY 1 cut(s) 367
BsrI ACTGG 2 cut(s) 289, 461
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 2 cut(s) 52, 795
BssMI GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
BssSI CACGAG 1 cut(s) 802
BssT1I CCWWGG 1 cut(s) 52
Bst2BI CACGAG 1 cut(s) 802
Bst2UI CCWGG 3 cut(s) 528, 564, 1330
Bst4CI ACNGT 4 cut(s) 104, 112, 796, 1286
Bst6I CTCTTC 1 cut(s) 782
BstBI TTCGAA 1 cut(s) 1017
BstC8I GCNNGC 2 cut(s) 93, 898
BstDEI CTNAG 4 cut(s) 178, 500, 938, 1442
BstDSI CCRYGG 1 cut(s) 795
BstEII GGTNACC 1 cut(s) 370
BstENI CCTNNNNNAGG 1 cut(s) 51
BstF5I GGATG 4 cut(s) 337, 623, 859, 1121
BstFNI CGCG 1 cut(s) 1146
BstHHI GCGC 1 cut(s) 1146
BstKTI GATC 8 cut(s) 243, 271, 275, 359, 642, 1029, 1243, 1254
BstMAI GTCTC 4 cut(s) 170, 877, 900, 986
BstMBI GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 1 cut(s) 948
BstNI CCWGG 3 cut(s) 528, 564, 1330
BstPI GGTNACC 1 cut(s) 370
BstSCI CCNGG 3 cut(s) 526, 562, 1328
BstUI CGCG 1 cut(s) 1146
BstV1I GCAGC 1 cut(s) 431
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 356
BstYI RGATCY 1 cut(s) 356
Bsu15I ATCGAT 2 cut(s) 271, 1250
BsuRI GGCC 5 cut(s) 57, 406, 762, 800, 1149
BsuTUI ATCGAT 2 cut(s) 271, 1250
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 4 cut(s) 337, 623, 859, 1121
BtsIMutI CAGTG 1 cut(s) 250
BveI ACCTGC 1 cut(s) 383
Cac8I GCNNGC 2 cut(s) 93, 898
CfoI GCGC 1 cut(s) 1146
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 2 cut(s) 761, 813
ClaI ATCGAT 2 cut(s) 271, 1250
Csp6I GTAC 1 cut(s) 717
CspAI ACCGGT 1 cut(s) 367
CviAII CATG 6 cut(s) 26, 59, 311, 326, 1053, 1436
CviQI GTAC 1 cut(s) 717
DdeI CTNAG 4 cut(s) 178, 500, 938, 1442
DpnI GATC 8 cut(s) 242, 270, 274, 358, 641, 1028, 1242, 1253
DpnII GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
DraIII CACNNNGTG 1 cut(s) 1112
DrdI GACNNNNNNGTC 2 cut(s) 368, 1460
DriI GACNNNNNGTC 1 cut(s) 595
DseDI GACNNNNNNGTC 2 cut(s) 368, 1460
EaeI YGGCCR 2 cut(s) 404, 798
Eam1104I CTCTTC 1 cut(s) 782
Eam1105I GACNNNNNGTC 1 cut(s) 595
EarI CTCTTC 1 cut(s) 782
Eco130I CCWWGG 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 986
Eco47I GGWCC 1 cut(s) 813
Eco88I CYCGRG 1 cut(s) 129
Eco91I GGTNACC 1 cut(s) 370
EcoNI CCTNNNNNAGG 1 cut(s) 51
EcoO65I GGTNACC 1 cut(s) 370
EcoRII CCWGG 3 cut(s) 526, 562, 1328
EcoT14I CCWWGG 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 6 cut(s) 29, 62, 314, 329, 1056, 1439
FaqI GGGAC 1 cut(s) 142
FatI CATG 6 cut(s) 25, 58, 310, 325, 1052, 1435
Fnu4HI GCNGC 2 cut(s) 420, 1147
FokI GGATG 4 cut(s) 344, 610, 866, 1128
Fsp4HI GCNGC 2 cut(s) 420, 1147
FspBI CTAG 4 cut(s) 350, 897, 1202, 1471
GlaI GCGC 1 cut(s) 1145
GluI GCNGC 2 cut(s) 420, 1147
GsaI CCCAGC 2 cut(s) 71, 323
HaeIII GGCC 5 cut(s) 57, 406, 762, 800, 1149
HapII CCGG 2 cut(s) 368, 851
HhaI GCGC 1 cut(s) 1146
Hin1II CATG 6 cut(s) 29, 62, 314, 329, 1056, 1439
Hin6I GCGC 1 cut(s) 1144
HinP1I GCGC 1 cut(s) 1144
HincII GTYRAC 3 cut(s) 124, 190, 1176
HindII GTYRAC 3 cut(s) 124, 190, 1176
HinfI GANTC 6 cut(s) 264, 710, 780, 1014, 1098, 1398
HpaI GTTAAC 1 cut(s) 190
HpaII CCGG 2 cut(s) 368, 851
HphI GGTGA 6 cut(s) 106, 131, 364, 1180, 1279, 1291
Hpy166II GTNNAC 7 cut(s) 124, 139, 190, 439, 634, 1176, 1282
Hpy188I TCNGA 9 cut(s) 181, 263, 356, 361, 503, 817, 1013, 1197, 1245
Hpy188III TCNNGA 5 cut(s) 167, 701, 734, 784, 1339
Hpy8I GTNNAC 7 cut(s) 124, 139, 190, 439, 634, 1176, 1282
Hpy99I CGWCG 3 cut(s) 203, 1013, 1211
HpyAV CCTTC 6 cut(s) 293, 614, 1213, 1270, 1327, 1408
HpyCH4III ACNGT 4 cut(s) 104, 112, 796, 1286
HpyCH4IV ACGT 3 cut(s) 186, 229, 441
HpyCH4V TGCA 5 cut(s) 310, 755, 828, 890, 1088
HpyF10VI GCNNNNNNNGC 1 cut(s) 948
HpyF3I CTNAG 4 cut(s) 178, 500, 938, 1442
HpySE526I ACGT 3 cut(s) 186, 229, 441
Hsp92II CATG 6 cut(s) 29, 62, 314, 329, 1056, 1439
HspAI GCGC 1 cut(s) 1144
KpnI GGTACC 1 cut(s) 720
KspAI GTTAAC 1 cut(s) 190
Kzo9I GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
LguI GCTCTTC 1 cut(s) 782
LmnI GCTCC 1 cut(s) 989
Lsp1109I GCAGC 1 cut(s) 431
LweI GCATC 2 cut(s) 104, 837
MaeI CTAG 4 cut(s) 350, 897, 1202, 1471
MaeII ACGT 3 cut(s) 186, 229, 441
MaeIII GTNAC 6 cut(s) 112, 235, 370, 512, 619, 689
MalI GATC 8 cut(s) 242, 270, 274, 358, 641, 1028, 1242, 1253
MboI GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
MboII GAAGA 5 cut(s) 187, 194, 799, 956, 1031
MfeI CAATTG 3 cut(s) 576, 756, 1089
MflI RGATCY 1 cut(s) 356
MhlI GDGCHC 1 cut(s) 794
MlsI TGGCCA 2 cut(s) 406, 800
MluCI AATT 9 cut(s) 576, 696, 756, 818, 861, 1065, 1089, 1184, 1313
MluNI TGGCCA 2 cut(s) 406, 800
MmeI TCCRAC 3 cut(s) 384, 991, 1341
Mox20I TGGCCA 2 cut(s) 406, 800
MroXI GAANNNNTTC 1 cut(s) 462
MscI TGGCCA 2 cut(s) 406, 800
MseI TTAA 5 cut(s) 189, 473, 666, 1103, 1230
MslI CAYNNNNRTG 2 cut(s) 330, 1159
Msp20I TGGCCA 2 cut(s) 406, 800
MspI CCGG 2 cut(s) 368, 851
MspR9I CCNGG 3 cut(s) 528, 564, 1330
MunI CAATTG 3 cut(s) 576, 756, 1089
Mva1269I GAATGC 1 cut(s) 1330
MvaI CCWGG 3 cut(s) 528, 564, 1330
MvnI CGCG 1 cut(s) 1146
MwoI GCNNNNNNNGC 1 cut(s) 948
NdeII GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
NheI GCTAGC 1 cut(s) 896
NlaIII CATG 6 cut(s) 29, 62, 314, 329, 1056, 1439
NlaIV GGNNCC 1 cut(s) 718
NmuCI GTSAC 4 cut(s) 112, 370, 512, 619
NspV TTCGAA 1 cut(s) 1017
PaqCI CACCTGC 1 cut(s) 383
PciSI GCTCTTC 1 cut(s) 782
PctI GAATGC 1 cut(s) 1330
PdmI GAANNNNTTC 1 cut(s) 462
PfeI GAWTC 6 cut(s) 264, 710, 780, 1014, 1098, 1398
PinAI ACCGGT 1 cut(s) 367
PkrI GCNGC 2 cut(s) 421, 1148
Ple19I CGATCG 1 cut(s) 271
Psp6I CCWGG 3 cut(s) 526, 562, 1328
PspEI GGTNACC 1 cut(s) 370
PspFI CCCAGC 2 cut(s) 67, 319
PspGI CCWGG 3 cut(s) 526, 562, 1328
PspN4I GGNNCC 1 cut(s) 718
PspPI GGNCC 2 cut(s) 761, 813
PsuI RGATCY 1 cut(s) 356
PvuI CGATCG 1 cut(s) 271
RsaI GTAC 1 cut(s) 718
RsaNI GTAC 1 cut(s) 717
RseI CAYNNNNRTG 2 cut(s) 330, 1159
SapI GCTCTTC 1 cut(s) 782
SaqAI TTAA 5 cut(s) 189, 473, 666, 1103, 1230
SatI GCNGC 2 cut(s) 420, 1147
Sau3AI GATC 8 cut(s) 240, 268, 272, 356, 639, 1026, 1240, 1251
Sau96I GGNCC 2 cut(s) 761, 813
ScrFI CCNGG 3 cut(s) 528, 564, 1330
SduI GDGCHC 1 cut(s) 794
SfaNI GCATC 2 cut(s) 104, 837
SfuI TTCGAA 1 cut(s) 1017
SinI GGWCC 1 cut(s) 813
SmiMI CAYNNNNRTG 2 cut(s) 330, 1159
SpeI ACTAGT 2 cut(s) 349, 1201
Sse9I AATT 9 cut(s) 576, 696, 756, 818, 861, 1065, 1089, 1184, 1313
SsiI CCGC 2 cut(s) 386, 1146
SspMI CTAG 4 cut(s) 350, 897, 1202, 1471
StyD4I CCNGG 3 cut(s) 526, 562, 1328
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 4 cut(s) 104, 112, 796, 1286
TaiI ACGT 3 cut(s) 189, 232, 444
TasI AATT 9 cut(s) 576, 696, 756, 818, 861, 1065, 1089, 1184, 1313
TauI GCSGC 1 cut(s) 1149
TfiI GAWTC 6 cut(s) 264, 710, 780, 1014, 1098, 1398
Tru1I TTAA 5 cut(s) 189, 473, 666, 1103, 1230
Tru9I TTAA 5 cut(s) 189, 473, 666, 1103, 1230
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 4 cut(s) 112, 370, 512, 619
TseI GCWGC 1 cut(s) 419
Tsp45I GTSAC 4 cut(s) 112, 370, 512, 619
TspDTI ATGAA 5 cut(s) 348, 670, 943, 1365, 1390
TspGWI ACGGA 1 cut(s) 616
TspRI CASTG 1 cut(s) 250
VpaK11BI GGWCC 1 cut(s) 813
XagI CCTNNNNNAGG 1 cut(s) 51
XapI RAATTY 1 cut(s) 818
XcmI CCANNNNNNNNNTGG 1 cut(s) 1433
XmnI GAANNNNTTC 1 cut(s) 462
XspI CTAG 4 cut(s) 350, 897, 1202, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.