MD12G1114100.v1.1

UDP-glycosyltransferase 86A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0002191
Physical Location & Seq
Reverse (-)
18171558 .. 18173209
1652 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1114100.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGGAGGACAAAGCCTCAAACCCTCATGCAATTATGGTTCCTCTTCCTCTCCAAGGCCATGTAATCCCATTCACCCATCTGGCCACGAAGCTTGCTTCACAAGGCTTCACCCTCACTTTTGTCAACACCCAATATATCCACCACCACATACTCAAGTCCCAACCCAACGACAAAACAGAAGACGATATCTTTGCCACAGCGCGTAAATCTGGTCTAGACATACGCTACACAACAGTGAGTGATGGATTTCCACTAGCTTTCGACCGATTTCAGAACCTCGACCAATTTCTTGAGGGTACTTTGCATGTCTTCCCTGCCCATGTGGATGAACTTGTTGGAGATTTAGTCCAATCTGACCCCTCAATCACTTGTTTGATTGTTGATACTTTCCAATCATGGTCAGCAACCATAGCCAACAAGTACAACCTTATCCATATTTCCTTCTGGACTGAACCAGCCCTAGTCTTAAACATCTACTATCACTTGGACCTTCTCCGAAAAAATGGTCATTTCGGTGCTCATGATAATCGCGAGGACATCATTGATTACATACCTAGCGTGAAAGCTATTGAACCAAGGGACTTGATGTCATGCCTCCAAACAACAGATTTATTTTGCCCAATGCTCCGCATCTTTTACAAGGCATTTCGCGAAGTGAAAAGGGCAGATTTTATTTTGTGTAATACAGTGCAAGAACTTGAATTTGAGTCCCTTTCTGCCTTGCAAGCGAAGCAACCAACATATGCAATTGGCCCCGTCTTCCCCGATAGTCTCACCAAGAACATCGTGGCTACCAATCTGATGCCAGAATTTGACTGCATCCATTGGCTCCACAAGAAGCCCCATGGTTCGGTTTTGTTCATTTCTTTTGGCAGCTATGCTCAAGTTACAAAGGATGATTTTGAGGAAATAGCTTATGGGCTTTTGCTTAGTGAAGTGAATTTCATCTGGGTACTTCGTCCCGACACTACAGGTTATGATGAAACGTATATTCTACCAGTCGGATTTGAAGATGAGATTAAAGATAGAGGGTTGATGGTGCCATGGTGCTCTCAGATTGAGGTGCTTTCACATCCAGCAGTAGGAGGGTTCTTAACGCATTGTGGATGGAATTCTATACTGGAAAGTATGCGGTGTGGTGTTCCCATGCTATGTTTTCCTCTAGTGGCTGACCAAATCACTAATAGGAAACTAGTAGTTGATGACTGGGGCGTTGGACTCAATCTTTGTGATCGGGTTAAACCCGTTAGAAGGGTGGATGTAGCAGAGAAGATCAACCGTCTGATATGTGGAGAATCGGGTGATGGTTTGCAGAAGAAGGTCATGAAAGTAACACAAACATTGGAGGATGCAGTGGCTCTAAATGGGTCATCACAAAAGAATTTATCTCAATTCATTAGTAATGTGAAGGAAAAAATTAGGACACGAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

478

Amino Acids

53.98

Weight (kDa)

5.64

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 282 - 406 9.9e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1039
AccII CGCG 3 cut(s) 202, 531, 651
AciI CCGC 2 cut(s) 628, 1132
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 5 cut(s) 701, 809, 940, 1111, 1381
AfaI GTAC 3 cut(s) 298, 422, 954
AfiI CCNNNNNNNGG 4 cut(s) 53, 850, 1082, 1251
AgsI TTSAA 3 cut(s) 572, 701, 1010
AhdI GACNNNNNGTC 1 cut(s) 586
AhlI ACTAGT 1 cut(s) 1192
AleI CACNNNNGTG 2 cut(s) 233, 1429
AluBI AGCT 5 cut(s) 91, 257, 566, 876, 914
AluI AGCT 5 cut(s) 91, 257, 566, 876, 914
Alw21I GWGCWC 2 cut(s) 520, 1052
Alw26I GTCTC 1 cut(s) 776
AoxI GGCC 3 cut(s) 55, 81, 751
ApeKI GCWGC 1 cut(s) 873
ApoI RAATTY 5 cut(s) 701, 809, 940, 1111, 1381
ArsI GACNNNNNNTTYG 6 cut(s) 173, 205, 490, 522, 1209, 1241
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 2 cut(s) 487, 752
AsuHPI GGTGA 4 cut(s) 64, 100, 766, 1313
AvaII GGWCC 1 cut(s) 487
BalI TGGCCA 1 cut(s) 83
BanI GGYRCC 1 cut(s) 1039
BbsI GAAGAC 3 cut(s) 186, 301, 751
Bbv12I GWGCWC 2 cut(s) 520, 1052
BbvI GCAGC 1 cut(s) 885
BccI CCATC 5 cut(s) 84, 236, 1030, 1101, 1298
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BcoDI GTCTC 1 cut(s) 776
BcuI ACTAGT 1 cut(s) 1192
BfaI CTAG 6 cut(s) 215, 254, 461, 555, 1163, 1193
BfmI CTRYAG 1 cut(s) 969
BisI GCNGC 1 cut(s) 874
BlsI GCNGC 1 cut(s) 875
Bme18I GGWCC 1 cut(s) 487
BmeRI GACNNNNNGTC 1 cut(s) 586
BmgT120I GGNCC 2 cut(s) 487, 752
BmiI GGNNCC 4 cut(s) 39, 754, 830, 1041
BmrI ACTGGG 1 cut(s) 1216
BmsI GCATC 4 cut(s) 639, 792, 828, 1339
BmuI ACTGGG 1 cut(s) 1216
BpiI GAAGAC 3 cut(s) 186, 301, 751
BpuEI CTTGAG 3 cut(s) 137, 311, 867
BsaJI CCNNGG 4 cut(s) 52, 575, 844, 1043
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 850, 1082, 1251
Bse1I ACTGG 3 cut(s) 998, 1125, 1211
BseDI CCNNGG 4 cut(s) 52, 575, 844, 1043
BseGI GGATG 7 cut(s) 331, 819, 901, 1072, 1112, 1264, 1354
BseLI CCNNNNNNNGG 4 cut(s) 53, 850, 1082, 1251
BseMII CTCAG 1 cut(s) 1067
BseNI ACTGG 3 cut(s) 998, 1125, 1211
BseXI GCAGC 1 cut(s) 885
Bsh1236I CGCG 3 cut(s) 202, 531, 651
Bsh1285I CGRYCG 1 cut(s) 265
BshFI GGCC 3 cut(s) 57, 83, 753
BshNI GGYRCC 1 cut(s) 1039
BsiEI CGRYCG 1 cut(s) 265
BsiHKAI GWGCWC 2 cut(s) 520, 1052
BslFI GGGAC 4 cut(s) 142, 593, 694, 945
BslI CCNNNNNNNGG 4 cut(s) 53, 850, 1082, 1251
BsmAI GTCTC 1 cut(s) 776
BsmFI GGGAC 4 cut(s) 142, 593, 694, 945
BsnI GGCC 3 cut(s) 57, 83, 753
Bsp1286I GDGCHC 2 cut(s) 520, 1052
Bsp143I GATC 2 cut(s) 1231, 1272
Bsp19I CCATGG 2 cut(s) 844, 1043
Bsp68I TCGCGA 2 cut(s) 531, 651
BspACI CCGC 2 cut(s) 628, 1132
BspANI GGCC 3 cut(s) 57, 83, 753
BspCNI CTCAG 1 cut(s) 1066
BspFNI CGCG 3 cut(s) 202, 531, 651
BspHI TCATGA 2 cut(s) 520, 1323
BspLI GGNNCC 4 cut(s) 39, 754, 830, 1041
BspT107I GGYRCC 1 cut(s) 1039
BsrI ACTGG 3 cut(s) 998, 1125, 1211
BssECI CCNNGG 4 cut(s) 52, 575, 844, 1043
BssMI GATC 2 cut(s) 1231, 1272
BssT1I CCWWGG 4 cut(s) 52, 575, 844, 1043
Bst4CI ACNGT 3 cut(s) 235, 688, 1280
Bst6I CTCTTC 1 cut(s) 48
BstC8I GCNNGC 2 cut(s) 93, 726
BstDEI CTNAG 2 cut(s) 929, 1053
BstDSI CCRYGG 2 cut(s) 844, 1043
BstENI CCTNNNNNAGG 1 cut(s) 51
BstF5I GGATG 7 cut(s) 331, 819, 901, 1072, 1112, 1264, 1354
BstFNI CGCG 3 cut(s) 202, 531, 651
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 2 cut(s) 1234, 1275
BstMAI GTCTC 1 cut(s) 776
BstMBI GATC 2 cut(s) 1231, 1272
BstMCI CGRYCG 1 cut(s) 265
BstMWI GCNNNNNNNGC 3 cut(s) 410, 725, 730
BstNSI RCATGY 1 cut(s) 308
BstSFI CTRYAG 1 cut(s) 969
BstUI CGCG 3 cut(s) 202, 531, 651
BstV1I GCAGC 1 cut(s) 885
BstV2I GAAGAC 3 cut(s) 186, 301, 751
BsuRI GGCC 3 cut(s) 57, 83, 753
BtgI CCRYGG 2 cut(s) 844, 1043
BtsCI GGATG 7 cut(s) 331, 819, 901, 1072, 1112, 1264, 1354
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 3 cut(s) 240, 693, 1359
BtuMI TCGCGA 2 cut(s) 531, 651
Cac8I GCNNGC 2 cut(s) 93, 726
CciI TCATGA 2 cut(s) 520, 1323
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 2 cut(s) 487, 752
Csp6I GTAC 3 cut(s) 297, 421, 953
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviQI GTAC 3 cut(s) 297, 421, 953
DdeI CTNAG 2 cut(s) 929, 1053
DpnI GATC 2 cut(s) 1233, 1274
DpnII GATC 2 cut(s) 1231, 1272
DriI GACNNNNNGTC 1 cut(s) 586
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 48
Eam1105I GACNNNNNGTC 1 cut(s) 586
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 4 cut(s) 52, 575, 844, 1043
Eco32I GATATC 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 487
EcoNI CCTNNNNNAGG 1 cut(s) 51
EcoRI GAATTC 1 cut(s) 1111
EcoRV GATATC 1 cut(s) 187
EcoT14I CCWWGG 4 cut(s) 52, 575, 844, 1043
ErhI CCWWGG 4 cut(s) 52, 575, 844, 1043
FaqI GGGAC 4 cut(s) 142, 593, 694, 945
FauNDI CATATG 1 cut(s) 742
Fnu4HI GCNGC 1 cut(s) 874
FokI GGATG 7 cut(s) 338, 806, 908, 1059, 1119, 1271, 1361
Fsp4HI GCNGC 1 cut(s) 874
FspBI CTAG 6 cut(s) 215, 254, 461, 555, 1163, 1193
GlaI GCGC 1 cut(s) 201
GluI GCNGC 1 cut(s) 874
HaeIII GGCC 3 cut(s) 57, 83, 753
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 3 cut(s) 707, 1218, 1295
HphI GGTGA 4 cut(s) 64, 100, 766, 1313
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 7 cut(s) 273, 355, 497, 801, 1004, 1056, 1284
Hpy188III TCNNGA 8 cut(s) 215, 290, 445, 521, 530, 650, 962, 1324
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 5 cut(s) 451, 500, 1245, 1312, 1402
HpyCH4III ACNGT 3 cut(s) 235, 688, 1280
HpyCH4IV ACGT 1 cut(s) 986
HpyCH4V TGCA 8 cut(s) 29, 304, 691, 724, 746, 819, 1312, 1352
HpyF10VI GCNNNNNNNGC 3 cut(s) 410, 725, 730
HpyF3I CTNAG 2 cut(s) 929, 1053
HpySE526I ACGT 1 cut(s) 986
HspAI GCGC 1 cut(s) 200
Kzo9I GATC 2 cut(s) 1231, 1272
LmnI GCTCC 2 cut(s) 630, 834
Lsp1109I GCAGC 1 cut(s) 885
LweI GCATC 4 cut(s) 639, 792, 828, 1339
MaeI CTAG 6 cut(s) 215, 254, 461, 555, 1163, 1193
MaeII ACGT 1 cut(s) 986
MaeIII GTNAC 2 cut(s) 886, 1330
MalI GATC 2 cut(s) 1233, 1274
MboI GATC 2 cut(s) 1231, 1272
MboII GAAGA 7 cut(s) 35, 191, 301, 751, 1022, 1282, 1327
MfeI CAATTG 1 cut(s) 747
MhlI GDGCHC 2 cut(s) 520, 1052
MlsI TGGCCA 1 cut(s) 83
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 2 cut(s) 716, 1212
MmeI TCCRAC 3 cut(s) 316, 982, 1195
Mox20I TGGCCA 1 cut(s) 83
MscI TGGCCA 1 cut(s) 83
MseI TTAA 4 cut(s) 467, 1020, 1094, 1239
MslI CAYNNNNRTG 4 cut(s) 233, 324, 513, 1429
Msp20I TGGCCA 1 cut(s) 83
MunI CAATTG 1 cut(s) 747
MvnI CGCG 3 cut(s) 202, 531, 651
MwoI GCNNNNNNNGC 3 cut(s) 410, 725, 730
NcoI CCATGG 2 cut(s) 844, 1043
NdeI CATATG 1 cut(s) 742
NdeII GATC 2 cut(s) 1231, 1272
NlaIV GGNNCC 4 cut(s) 39, 754, 830, 1041
NruI TCGCGA 2 cut(s) 531, 651
NspI RCATGY 1 cut(s) 308
OliI CACNNNNGTG 2 cut(s) 233, 1429
PagI TCATGA 2 cut(s) 520, 1323
PfeI GAWTC 1 cut(s) 1295
PkrI GCNGC 1 cut(s) 875
PleI GAGTC 2 cut(s) 715, 1212
PpsI GAGTC 2 cut(s) 715, 1212
PspN4I GGNNCC 4 cut(s) 39, 754, 830, 1041
PspPI GGNCC 2 cut(s) 487, 752
RruI TCGCGA 2 cut(s) 531, 651
RsaI GTAC 3 cut(s) 298, 422, 954
RsaNI GTAC 3 cut(s) 297, 421, 953
RseI CAYNNNNRTG 4 cut(s) 233, 324, 513, 1429
SaqAI TTAA 4 cut(s) 467, 1020, 1094, 1239
SatI GCNGC 1 cut(s) 874
Sau3AI GATC 2 cut(s) 1231, 1272
Sau96I GGNCC 2 cut(s) 487, 752
SchI GAGTC 2 cut(s) 716, 1212
SduI GDGCHC 2 cut(s) 520, 1052
SfaNI GCATC 4 cut(s) 639, 792, 828, 1339
SfcI CTRYAG 1 cut(s) 969
SinI GGWCC 1 cut(s) 487
SmiMI CAYNNNNRTG 4 cut(s) 233, 324, 513, 1429
SmlI CTYRAG 3 cut(s) 152, 290, 882
SmoI CTYRAG 3 cut(s) 152, 290, 882
SpeI ACTAGT 1 cut(s) 1192
SsiI CCGC 2 cut(s) 628, 1132
SspMI CTAG 6 cut(s) 215, 254, 461, 555, 1163, 1193
StyI CCWWGG 4 cut(s) 52, 575, 844, 1043
TaaI ACNGT 3 cut(s) 235, 688, 1280
TaiI ACGT 1 cut(s) 989
TaqI TCGA 2 cut(s) 261, 279
TaqII GACCGA 1 cut(s) 279
TatI WGTACW 1 cut(s) 420
TfiI GAWTC 1 cut(s) 1295
Tru1I TTAA 4 cut(s) 467, 1020, 1094, 1239
Tru9I TTAA 4 cut(s) 467, 1020, 1094, 1239
TscAI CASTG 3 cut(s) 240, 693, 1359
TseI GCWGC 1 cut(s) 873
TspDTI ATGAA 6 cut(s) 342, 850, 934, 996, 1340, 1384
TspRI CASTG 3 cut(s) 240, 693, 1359
VpaK11BI GGWCC 1 cut(s) 487
XagI CCTNNNNNAGG 1 cut(s) 51
XapI RAATTY 5 cut(s) 701, 809, 940, 1111, 1381
XbaI TCTAGA 1 cut(s) 214
XceI RCATGY 1 cut(s) 308
XcmI CCANNNNNNNNNTGG 1 cut(s) 784
XspI CTAG 6 cut(s) 215, 254, 461, 555, 1163, 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.