pycom12g11330

UDP-glycosyltransferase 86A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0002191
Physical Location & Seq
Reverse (-)
13546255 .. 13548290
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g11330.1

Sequence Viewer

Length: 1485 bp
ATGTCCAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAGGGCAAAGCCTCAACCCCTCATGCAATCATGGTGCCTCTTCCTCTCCAAGGCCATGTAACCCCATTGACCCATCTGGCCACGAAGCTTGCTTCACAGGGCTTCACCATCACTTTTGTCAACACCCAATATATTCACCACCACATACTCAAGTCACAACCCAACGACAACACAGAAGACGATATCTTTGCCATGGCGCGTAAATCCGGTCTAGACATACGCTACACAACAGTAAGTGATGGATTTCCACTAGCTTTCAACCGAATTCAGAACCTCGACCAATCTCTTGAGGGTGCTTTGCATGTCTTCCCTGCCCATGTGGATGAACTTGTTGGAAATTTAGTCCAATCTGACCCCTCAATCACTTGTTTGATTGTTGATACGTTCCAAGCATGGTCAGCAACCATAGCCAACAAGTACAACCTTATCCATATTTCCTTCTGGACTGAACCAGCCCTAGTCTTAAACATCTACTATCACTTGGACCTTCTCCGAAAAAATGGTCATTTCGGTGCTCATGATAATCGCGAGGATATCATTGATTACATACCTAGTGTGAAAGCTATTGAACCAAGGGACTTGATGTCATACCTCCAAACAACAGATATATTTTGCCCAATGCTCCGCATCTATTACAAGGCATTTCGCGAAGTGAAAAGGGCAGATTTTATTTTGTGTAATACAGTGCAAGAACTTGAATTTGAGTCCCTTTCTGCCTTGCAATCGAAGCAACCAACATATGCAATTGGCCCTGTCTTGCCCGATAGTCTCACCAATAACATCGTGGCTACCAATCTGATGCCAGAATCTGACTGCATCCATTGGCTCCACAAGAAGCCCCATGGTTCGGTTTTGTTCATTTCTTTTGGCAGCTATGCTCAAGTTACAAAGGATGATTTTGAGGAAATAGCTCATGGGCTTTTGCTTAGTAAAGTGAATTTCATCTGGGTACTTCGTCCCGACACTACAGGTTATGATGAAACGTATATTCTACCAGTCGGATTTGAAGATGAGATTAAAGATAGAGGGTTGATGGTGCCATGGTGCTCTCAGATTGAGGTGCTTTCACATCCAGCAGTAGGAGGGTTCTTAACGCATTGTGGATGGAATTCTATACTGGAAAGTATGCGGTGTGGTGTTCCCATGCTATGTTTTCCCCTAGTGGCTGATCAAATCACTAATAGGAAACTAGTAGTTGATGATTGGGGCGTTGGACTCAATCTTTGTGATCGGGTTAAACCCGTTAGAAGGGTGGAGGTAGCAGAGAAGATCAACCGTCTGATATGTGGAAAATCGGGTGATGGTTTGCAGAAGAAGGTCATGAAAGTAACACAAACATTGGAGGATGCAGTGGCTCTAAATGGGTCATCACAAAAGAATTTATCTCAATTCATTAGTGACGTGAAGGAAAAAATTCAGACACGAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

495

Amino Acids

55.98

Weight (kDa)

5.92

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 299 - 422 5.7e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 88, 1090
AccII CGCG 3 cut(s) 253, 582, 702
AciI CCGC 2 cut(s) 679, 1183
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 7 cut(s) 318, 391, 752, 991, 1162, 1432, 1467
AfaI GTAC 2 cut(s) 473, 1005
AfiI CCNNNNNNNGG 4 cut(s) 104, 901, 1133, 1302
AgsI TTSAA 4 cut(s) 313, 623, 752, 1061
AhdI GACNNNNNGTC 1 cut(s) 637
AhlI ACTAGT 1 cut(s) 1243
AjiI CACGTC 1 cut(s) 1456
AleI CACNNNNGTG 1 cut(s) 1480
AluBI AGCT 5 cut(s) 142, 308, 617, 927, 965
AluI AGCT 5 cut(s) 142, 308, 617, 927, 965
Alw21I GWGCWC 2 cut(s) 571, 1103
Alw26I GTCTC 1 cut(s) 827
AlwNI CAGNNNCTG 1 cut(s) 863
AoxI GGCC 3 cut(s) 106, 132, 802
ApeKI GCWGC 1 cut(s) 924
ApoI RAATTY 7 cut(s) 318, 391, 752, 991, 1162, 1432, 1467
ArsI GACNNNNNNTTYG 6 cut(s) 224, 256, 541, 573, 1260, 1292
Asp700I GAANNNNTTC 1 cut(s) 1467
AspLEI GCGC 1 cut(s) 253
AspS9I GGNCC 2 cut(s) 538, 803
AsuHPI GGTGA 4 cut(s) 151, 182, 817, 1364
AvaII GGWCC 1 cut(s) 538
BalI TGGCCA 1 cut(s) 134
BanI GGYRCC 2 cut(s) 88, 1090
BbsI GAAGAC 2 cut(s) 237, 352
Bbv12I GWGCWC 2 cut(s) 571, 1103
BbvI GCAGC 1 cut(s) 936
BccI CCATC 7 cut(s) 46, 135, 170, 287, 1081, 1152, 1349
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BclI TGATCA 1 cut(s) 1222
BcoDI GTCTC 1 cut(s) 827
BcuI ACTAGT 1 cut(s) 1243
BfaI CTAG 6 cut(s) 266, 305, 512, 606, 1214, 1244
BfmI CTRYAG 1 cut(s) 1020
BisI GCNGC 1 cut(s) 925
BlsI GCNGC 1 cut(s) 926
Bme18I GGWCC 1 cut(s) 538
BmeRI GACNNNNNGTC 1 cut(s) 637
BmgBI CACGTC 1 cut(s) 1456
BmgT120I GGNCC 2 cut(s) 538, 803
BmiI GGNNCC 3 cut(s) 90, 881, 1092
BmsI GCATC 4 cut(s) 690, 843, 879, 1390
BpiI GAAGAC 2 cut(s) 237, 352
BpuEI CTTGAG 3 cut(s) 188, 362, 918
BsaJI CCNNGG 5 cut(s) 103, 246, 626, 895, 1094
BsaWI WCCGGW 1 cut(s) 260
Bsc4I CCNNNNNNNGG 4 cut(s) 104, 901, 1133, 1302
Bse1I ACTGG 3 cut(s) 6, 1049, 1176
BseDI CCNNGG 5 cut(s) 103, 246, 626, 895, 1094
BseGI GGATG 6 cut(s) 382, 870, 952, 1123, 1163, 1405
BseLI CCNNNNNNNGG 4 cut(s) 104, 901, 1133, 1302
BseMII CTCAG 1 cut(s) 1118
BseNI ACTGG 3 cut(s) 6, 1049, 1176
BseXI GCAGC 1 cut(s) 936
Bsh1236I CGCG 3 cut(s) 253, 582, 702
BshFI GGCC 3 cut(s) 108, 134, 804
BshNI GGYRCC 2 cut(s) 88, 1090
BsiHKAI GWGCWC 2 cut(s) 571, 1103
BsiSI CCGG 1 cut(s) 261
BslFI GGGAC 3 cut(s) 644, 745, 996
BslI CCNNNNNNNGG 4 cut(s) 104, 901, 1133, 1302
BsmAI GTCTC 1 cut(s) 827
BsmFI GGGAC 3 cut(s) 644, 745, 996
BsnI GGCC 3 cut(s) 108, 134, 804
Bsp1286I GDGCHC 2 cut(s) 571, 1103
Bsp143I GATC 3 cut(s) 1222, 1282, 1323
Bsp19I CCATGG 3 cut(s) 246, 895, 1094
Bsp68I TCGCGA 2 cut(s) 582, 702
BspACI CCGC 2 cut(s) 679, 1183
BspANI GGCC 3 cut(s) 108, 134, 804
BspCNI CTCAG 1 cut(s) 1117
BspFNI CGCG 3 cut(s) 253, 582, 702
BspHI TCATGA 2 cut(s) 571, 1374
BspLI GGNNCC 3 cut(s) 90, 881, 1092
BspT107I GGYRCC 2 cut(s) 88, 1090
BsrI ACTGG 3 cut(s) 6, 1049, 1176
BssECI CCNNGG 5 cut(s) 103, 246, 626, 895, 1094
BssMI GATC 3 cut(s) 1222, 1282, 1323
BssT1I CCWWGG 5 cut(s) 103, 246, 626, 895, 1094
Bst4CI ACNGT 3 cut(s) 286, 739, 1331
Bst6I CTCTTC 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 144
BstDEI CTNAG 2 cut(s) 980, 1104
BstDSI CCRYGG 3 cut(s) 246, 895, 1094
BstENI CCTNNNNNAGG 1 cut(s) 102
BstF5I GGATG 6 cut(s) 382, 870, 952, 1123, 1163, 1405
BstFNI CGCG 3 cut(s) 253, 582, 702
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 3 cut(s) 1225, 1285, 1326
BstMAI GTCTC 1 cut(s) 827
BstMBI GATC 3 cut(s) 1222, 1282, 1323
BstMWI GCNNNNNNNGC 3 cut(s) 452, 461, 781
BstNSI RCATGY 1 cut(s) 359
BstSFI CTRYAG 1 cut(s) 1020
BstUI CGCG 3 cut(s) 253, 582, 702
BstV1I GCAGC 1 cut(s) 936
BstV2I GAAGAC 2 cut(s) 237, 352
BsuRI GGCC 3 cut(s) 108, 134, 804
BtgI CCRYGG 3 cut(s) 246, 895, 1094
BtrI CACGTC 1 cut(s) 1456
BtsCI GGATG 6 cut(s) 382, 870, 952, 1123, 1163, 1405
BtsI GCAGTG 1 cut(s) 1410
BtsIMutI CAGTG 2 cut(s) 744, 1410
BtuMI TCGCGA 2 cut(s) 582, 702
Cac8I GCNNGC 1 cut(s) 144
CaiI CAGNNNCTG 1 cut(s) 863
CciI TCATGA 2 cut(s) 571, 1374
CfoI GCGC 1 cut(s) 253
Cfr13I GGNCC 2 cut(s) 538, 803
Csp6I GTAC 2 cut(s) 472, 1004
CspCI CAANNNNNGTGG 2 cut(s) 124, 159
CviQI GTAC 2 cut(s) 472, 1004
DdeI CTNAG 2 cut(s) 980, 1104
DpnI GATC 3 cut(s) 1224, 1284, 1325
DpnII GATC 3 cut(s) 1222, 1282, 1323
DriI GACNNNNNGTC 1 cut(s) 637
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 99
Eam1105I GACNNNNNGTC 1 cut(s) 637
EarI CTCTTC 1 cut(s) 99
Eco130I CCWWGG 5 cut(s) 103, 246, 626, 895, 1094
Eco32I GATATC 2 cut(s) 238, 589
Eco47I GGWCC 1 cut(s) 538
EcoNI CCTNNNNNAGG 1 cut(s) 102
EcoRI GAATTC 2 cut(s) 318, 1162
EcoRV GATATC 2 cut(s) 238, 589
EcoT14I CCWWGG 5 cut(s) 103, 246, 626, 895, 1094
ErhI CCWWGG 5 cut(s) 103, 246, 626, 895, 1094
FaqI GGGAC 3 cut(s) 644, 745, 996
FauNDI CATATG 1 cut(s) 793
FbaI TGATCA 1 cut(s) 1222
Fnu4HI GCNGC 1 cut(s) 925
FokI GGATG 6 cut(s) 389, 857, 959, 1110, 1170, 1412
Fsp4HI GCNGC 1 cut(s) 925
FspBI CTAG 6 cut(s) 266, 305, 512, 606, 1214, 1244
GlaI GCGC 1 cut(s) 252
GluI GCNGC 1 cut(s) 925
HaeIII GGCC 3 cut(s) 108, 134, 804
HapII CCGG 1 cut(s) 261
HhaI GCGC 1 cut(s) 253
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 3 cut(s) 758, 860, 1269
HpaII CCGG 1 cut(s) 261
HphI GGTGA 4 cut(s) 151, 182, 817, 1364
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 9 cut(s) 324, 406, 548, 852, 865, 1055, 1107, 1335, 1473
Hpy188III TCNNGA 8 cut(s) 266, 341, 496, 572, 581, 701, 1013, 1375
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 5 cut(s) 502, 551, 1296, 1363, 1453
HpyCH4III ACNGT 3 cut(s) 286, 739, 1331
HpyCH4IV ACGT 3 cut(s) 437, 1037, 1455
HpyCH4V TGCA 8 cut(s) 80, 355, 742, 775, 797, 870, 1363, 1403
HpyF10VI GCNNNNNNNGC 3 cut(s) 452, 461, 781
HpyF3I CTNAG 2 cut(s) 980, 1104
HpySE526I ACGT 3 cut(s) 437, 1037, 1455
HspAI GCGC 1 cut(s) 251
Ksp22I TGATCA 1 cut(s) 1222
Kzo9I GATC 3 cut(s) 1222, 1282, 1323
LmnI GCTCC 2 cut(s) 681, 885
Lsp1109I GCAGC 1 cut(s) 936
LweI GCATC 4 cut(s) 690, 843, 879, 1390
MaeI CTAG 6 cut(s) 266, 305, 512, 606, 1214, 1244
MaeII ACGT 3 cut(s) 437, 1037, 1455
MaeIII GTNAC 5 cut(s) 112, 207, 937, 1381, 1451
MalI GATC 3 cut(s) 1224, 1284, 1325
MboI GATC 3 cut(s) 1222, 1282, 1323
MboII GAAGA 6 cut(s) 86, 242, 352, 1073, 1333, 1378
MfeI CAATTG 1 cut(s) 798
MhlI GDGCHC 2 cut(s) 571, 1103
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 9 cut(s) 318, 391, 752, 798, 991, 1162, 1432, 1442, 1467
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 2 cut(s) 767, 1263
MmeI TCCRAC 3 cut(s) 367, 1033, 1246
Mox20I TGGCCA 1 cut(s) 134
MroXI GAANNNNTTC 1 cut(s) 1467
MscI TGGCCA 1 cut(s) 134
MseI TTAA 4 cut(s) 518, 1071, 1145, 1290
MslI CAYNNNNRTG 3 cut(s) 375, 564, 1480
Msp20I TGGCCA 1 cut(s) 134
MspI CCGG 1 cut(s) 261
MunI CAATTG 1 cut(s) 798
MvnI CGCG 3 cut(s) 253, 582, 702
MwoI GCNNNNNNNGC 3 cut(s) 452, 461, 781
NcoI CCATGG 3 cut(s) 246, 895, 1094
NdeI CATATG 1 cut(s) 793
NdeII GATC 3 cut(s) 1222, 1282, 1323
NlaIV GGNNCC 3 cut(s) 90, 881, 1092
NmuCI GTSAC 2 cut(s) 207, 1451
NruI TCGCGA 2 cut(s) 582, 702
NspI RCATGY 1 cut(s) 359
OliI CACNNNNGTG 1 cut(s) 1480
PagI TCATGA 2 cut(s) 571, 1374
PdmI GAANNNNTTC 1 cut(s) 1467
PfeI GAWTC 1 cut(s) 860
PkrI GCNGC 1 cut(s) 926
PleI GAGTC 2 cut(s) 766, 1263
PpsI GAGTC 2 cut(s) 766, 1263
PspN4I GGNNCC 3 cut(s) 90, 881, 1092
PspPI GGNCC 2 cut(s) 538, 803
PstNI CAGNNNCTG 1 cut(s) 863
RruI TCGCGA 2 cut(s) 582, 702
RsaI GTAC 2 cut(s) 473, 1005
RsaNI GTAC 2 cut(s) 472, 1004
RseI CAYNNNNRTG 3 cut(s) 375, 564, 1480
SaqAI TTAA 4 cut(s) 518, 1071, 1145, 1290
SatI GCNGC 1 cut(s) 925
Sau3AI GATC 3 cut(s) 1222, 1282, 1323
Sau96I GGNCC 2 cut(s) 538, 803
SchI GAGTC 2 cut(s) 767, 1263
SduI GDGCHC 2 cut(s) 571, 1103
SfaNI GCATC 4 cut(s) 690, 843, 879, 1390
SfcI CTRYAG 1 cut(s) 1020
SinI GGWCC 1 cut(s) 538
SmiMI CAYNNNNRTG 3 cut(s) 375, 564, 1480
SmlI CTYRAG 3 cut(s) 203, 341, 933
SmoI CTYRAG 3 cut(s) 203, 341, 933
SpeI ACTAGT 1 cut(s) 1243
Sse9I AATT 9 cut(s) 318, 391, 752, 798, 991, 1162, 1432, 1442, 1467
SsiI CCGC 2 cut(s) 679, 1183
SspMI CTAG 6 cut(s) 266, 305, 512, 606, 1214, 1244
StyI CCWWGG 5 cut(s) 103, 246, 626, 895, 1094
TaaI ACNGT 3 cut(s) 286, 739, 1331
TaiI ACGT 3 cut(s) 440, 1040, 1458
TaqI TCGA 2 cut(s) 330, 779
TasI AATT 9 cut(s) 318, 391, 752, 798, 991, 1162, 1432, 1442, 1467
TatI WGTACW 1 cut(s) 471
TfiI GAWTC 1 cut(s) 860
Tru1I TTAA 4 cut(s) 518, 1071, 1145, 1290
Tru9I TTAA 4 cut(s) 518, 1071, 1145, 1290
TscAI CASTG 2 cut(s) 744, 1410
TseFI GTSAC 2 cut(s) 207, 1451
TseI GCWGC 1 cut(s) 924
Tsp45I GTSAC 2 cut(s) 207, 1451
TspDTI ATGAA 6 cut(s) 393, 901, 985, 1047, 1391, 1435
TspRI CASTG 2 cut(s) 744, 1410
VpaK11BI GGWCC 1 cut(s) 538
XagI CCTNNNNNAGG 1 cut(s) 102
XapI RAATTY 7 cut(s) 318, 391, 752, 991, 1162, 1432, 1467
XbaI TCTAGA 1 cut(s) 265
XceI RCATGY 1 cut(s) 359
XcmI CCANNNNNNNNNTGG 1 cut(s) 835
XmnI GAANNNNTTC 1 cut(s) 1467
XspI CTAG 6 cut(s) 266, 305, 512, 606, 1214, 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.