Rh3DG195100

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
17490272 .. 17494539
4268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG195100.1

Sequence Viewer

Length: 1476 bp
ATGGAGAACAATCACTCAAAGCCTCACGCTGTTCTATTTCCCTACCCGCTCCAAGGCCATGTAATCCCAGCGGTCCATCTCGCAATCAAGCTCGCATCAAGCGGCTTCACAGTGACCTTTGTCAACACCCGGGCAGTCCACCACCAAATAATCAAGTCCCAAAGTCCCGATAACGCCATAGAAGACGACGTTAACATCTTCAACGGGGTGTGTAAATCAAGCCTTGACATACGTTATGCAACAATCAGCGACGGTTTTCCTATTGGATTCGACCGATCCCTCAACCACGACCAGTTTTGGGAAGGTGTTCTGCATGTTTTCCCAGCTCATGTGGATGAACTTGTAGCAAAACTAGTCCGATCCGACCCACCGGTCACTTGCTTGATAGCTGACACTTTCTTTGTGTGGCCAACAATGATGGCAACAAAGTATAACCTTGTGAATGTGTCATTTTGGACCGAACCTGTTCTGGTCTTAACCCTCTACTACCATATATACCTCCTCAGAGAAAATGGTCACTTTGCTTCTCGTGATAATCATCGCAAAGATACAATCGACTACATTCCAGGTGTGAAAGCAATTGAACCAAAAGACTTGATGTCGTACCTTCAAGCTACTGAGGTCACGTCCGTAGAACACAAGATCATATTCAAGGCATTTGAAGAAGTTAAAAGGTCAGATTTCATTCTTTGTAACACAGTTCAAGAGCTTGAATCAGATACCATATCTGCCTTGCAAGAAAAGCAACCTACATATGCAATCGGCCCTATTTTTCCCAATGGGTTCACGAAAAGCACCGTGGCCACGAGTCTCTGGTCCGAATCTAACTGTATCGAATGGCTCAACACTAAACTGCATGATTCAATCCTCTATGTCTCATTTGGCAGCTATGCGCATGCGAGTAAAAAAGACATAGAGGAAATCGCTAATGGGCTTTCGTTGAGCAGAGTCGGCTTTATTTGGGCTCTTCGGCCTGATATTGTCAGCTCCAACGAGACCCAAATCCTACCCATTGGATTTGAAGACGAGATCAAGAATAGAGGGTTGATCGTGCCATGGTGTAGTCAAATTGAAGTCATCTCACACCCCGCAATCGGAGGGTTCTTAACACATTGCGGATGGAATTCAATATTGGAAAGTATATGGTGTGGTCTGCCATTGTTGTGCTATCCATTGTTGACTGACCAACTCACCAATCGGAAACTAGTGGTCGACGATTGGAAGGTCGGGATTAACCTCTGCGATCGCAAACCGATCACAAAGGAGGAGGTGAAAGAGAAGGTGAACCGTTTAATGAGAGGAAAGTCAAGTGAGGAGTTGAGGAGGAATGCGAAAGAGGTCAAGAACACATTAGAGAGTGCATTGGATGAAGATGGTTCATCAAACAGAAACTTCAATCGATTCATAGATGACGTTAAGGCTAAAATCCAAGATAAACATGGGCTTGGCTTCAAAGCATTAAATGGCAATAGCTAG
Functional Annotation

Protein Analysis

491

Amino Acids

55.44

Weight (kDa)

5.99

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 285 - 437 3.8e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 371
Acc16I TGCGCA 1 cut(s) 894
AccBSI CCGCTC 1 cut(s) 49
AccI GTMKAC 1 cut(s) 1212
AciI CCGC 5 cut(s) 47, 71, 102, 1089, 1116
AclWI GGATC 2 cut(s) 270, 354
AcoI YGGCCR 2 cut(s) 407, 801
AcsI RAATTY 1 cut(s) 1123
AfaI GTAC 1 cut(s) 605
AfiI CCNNNNNNNGG 3 cut(s) 53, 298, 1094
AgeI ACCGGT 1 cut(s) 370
AhdI GACNNNNNGTC 1 cut(s) 598
AhlI ACTAGT 2 cut(s) 352, 1204
AjiI CACGTC 1 cut(s) 627
AjnI CCWGG 1 cut(s) 565
AjuI GAANNNNNNNTTGG 2 cut(s) 1115, 1147
AluBI AGCT 8 cut(s) 91, 326, 389, 614, 709, 888, 987, 1473
AluI AGCT 8 cut(s) 91, 326, 389, 614, 709, 888, 987, 1473
Alw26I GTCTC 3 cut(s) 815, 880, 989
AlwI GGATC 2 cut(s) 270, 354
Ama87I CYCGRG 1 cut(s) 129
AoxI GGCC 5 cut(s) 55, 407, 763, 801, 971
ApeKI GCWGC 1 cut(s) 885
ApoI RAATTY 1 cut(s) 1123
ArsI GACNNNNNNTTYG 2 cut(s) 383, 415
AsiGI ACCGGT 1 cut(s) 370
AsiSI GCGATCGC 1 cut(s) 1246
Asp700I GAANNNNTTC 2 cut(s) 306, 465
AspLEI GCGC 1 cut(s) 895
AspS9I GGNCC 4 cut(s) 73, 456, 764, 816
AsuC2I CCSGG 2 cut(s) 130, 131
AsuHPI GGTGA 3 cut(s) 1183, 1282, 1294
AvaI CYCGRG 1 cut(s) 129
AvaII GGWCC 3 cut(s) 73, 456, 816
BalI TGGCCA 2 cut(s) 409, 803
BanII GRGCYC 1 cut(s) 967
BauI CACGAG 2 cut(s) 528, 805
BbsI GAAGAC 2 cut(s) 189, 1029
BbvI GCAGC 1 cut(s) 897
BccI CCATC 4 cut(s) 84, 412, 1113, 1367
BciT130I CCWGG 1 cut(s) 567
BcnI CCSGG 2 cut(s) 130, 131
BcoDI GTCTC 3 cut(s) 815, 880, 989
BcuI ACTAGT 2 cut(s) 352, 1204
BfaI CTAG 3 cut(s) 353, 1205, 1474
BisI GCNGC 2 cut(s) 103, 886
BlsI GCNGC 2 cut(s) 104, 887
Bme1390I CCNGG 3 cut(s) 130, 131, 567
Bme18I GGWCC 3 cut(s) 73, 456, 816
BmeRI GACNNNNNGTC 1 cut(s) 598
BmeT110I CYCGRG 1 cut(s) 129
BmgBI CACGTC 1 cut(s) 627
BmgT120I GGNCC 4 cut(s) 73, 456, 764, 816
BmrFI CCNGG 3 cut(s) 130, 131, 567
BmsI GCATC 1 cut(s) 104
BoxI GACNNNNGTC 1 cut(s) 119
BpiI GAAGAC 2 cut(s) 189, 1029
BpuMI CCSGG 2 cut(s) 130, 131
Bsa29I ATCGAT 1 cut(s) 1399
BsaBI GATNNNNATC 1 cut(s) 537
BsaI GGTCTC 1 cut(s) 989
BsaJI CCNNGG 4 cut(s) 52, 129, 798, 1055
BsaWI WCCGGW 1 cut(s) 370
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 298, 1094
Bse118I RCCGGY 1 cut(s) 370
Bse1I ACTGG 1 cut(s) 292
Bse3DI GCAATG 1 cut(s) 1111
Bse8I GATNNNNATC 1 cut(s) 537
BseBI CCWGG 1 cut(s) 567
BseCI ATCGAT 1 cut(s) 1399
BseDI CCNNGG 4 cut(s) 52, 129, 798, 1055
BseGI GGATG 3 cut(s) 340, 1124, 1372
BseJI GATNNNNATC 1 cut(s) 537
BseLI CCNNNNNNNGG 3 cut(s) 53, 298, 1094
BseMI GCAATG 1 cut(s) 1111
BseMII CTCAG 2 cut(s) 517, 609
BseNI ACTGG 1 cut(s) 292
BseRI GAGGAG 4 cut(s) 491, 1280, 1328, 1336
BseXI GCAGC 1 cut(s) 897
BseYI CCCAGC 2 cut(s) 67, 322
Bsh1285I CGRYCG 2 cut(s) 274, 1246
BshFI GGCC 5 cut(s) 57, 409, 765, 803, 973
BshTI ACCGGT 1 cut(s) 370
BshVI ATCGAT 1 cut(s) 1399
BsiEI CGRYCG 2 cut(s) 274, 1246
BsiHKCI CYCGRG 1 cut(s) 129
BsiSI CCGG 2 cut(s) 130, 371
BslFI GGGAC 2 cut(s) 142, 150
BslI CCNNNNNNNGG 3 cut(s) 53, 298, 1094
BsmAI GTCTC 3 cut(s) 815, 880, 989
BsmFI GGGAC 2 cut(s) 142, 150
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 5 cut(s) 57, 409, 765, 803, 973
Bso31I GGTCTC 1 cut(s) 989
BsoBI CYCGRG 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 967
Bsp143I GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
Bsp19I CCATGG 1 cut(s) 1055
BspACI CCGC 5 cut(s) 47, 71, 102, 1089, 1116
BspANI GGCC 5 cut(s) 57, 409, 765, 803, 973
BspCNI CTCAG 2 cut(s) 516, 610
BspDI ATCGAT 1 cut(s) 1399
BspPI GGATC 2 cut(s) 270, 354
BspQI GCTCTTC 1 cut(s) 972
BspTNI GGTCTC 1 cut(s) 989
BsrBI CCGCTC 1 cut(s) 49
BsrDI GCAATG 1 cut(s) 1111
BsrFI RCCGGY 1 cut(s) 370
BsrI ACTGG 1 cut(s) 292
BssAI RCCGGY 1 cut(s) 370
BssECI CCNNGG 4 cut(s) 52, 129, 798, 1055
BssMI GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
BssSI CACGAG 2 cut(s) 528, 805
BssT1I CCWWGG 2 cut(s) 52, 1055
Bst2BI CACGAG 2 cut(s) 528, 805
Bst2UI CCWGG 1 cut(s) 567
Bst4CI ACNGT 6 cut(s) 112, 254, 700, 799, 830, 1289
Bst6I CTCTTC 1 cut(s) 972
BstC8I GCNNGC 2 cut(s) 93, 897
BstDEI CTNAG 2 cut(s) 503, 618
BstDSI CCRYGG 2 cut(s) 798, 1055
BstF5I GGATG 3 cut(s) 340, 1124, 1372
BstHHI GCGC 1 cut(s) 895
BstKTI GATC 7 cut(s) 278, 362, 645, 1032, 1050, 1246, 1257
BstMAI GTCTC 3 cut(s) 815, 880, 989
BstMBI GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
BstMCI CGRYCG 2 cut(s) 274, 1246
BstMWI GCNNNNNNNGC 2 cut(s) 742, 951
BstNI CCWGG 1 cut(s) 567
BstNSI RCATGY 2 cut(s) 317, 899
BstPAI GACNNNNGTC 1 cut(s) 119
BstSCI CCNGG 3 cut(s) 128, 129, 565
BstV1I GCAGC 1 cut(s) 897
BstV2I GAAGAC 2 cut(s) 189, 1029
Bsu15I ATCGAT 1 cut(s) 1399
BsuRI GGCC 5 cut(s) 57, 409, 765, 803, 973
BsuTUI ATCGAT 1 cut(s) 1399
BtgI CCRYGG 2 cut(s) 798, 1055
BtgZI GCGATG 1 cut(s) 524
BtrI CACGTC 1 cut(s) 627
BtsCI GGATG 3 cut(s) 340, 1124, 1372
BtsIMutI CAGTG 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 93, 897
CfoI GCGC 1 cut(s) 895
Cfr10I RCCGGY 1 cut(s) 370
Cfr13I GGNCC 4 cut(s) 73, 456, 764, 816
Cfr9I CCCGGG 1 cut(s) 129
ClaI ATCGAT 1 cut(s) 1399
Csp6I GTAC 1 cut(s) 604
CspAI ACCGGT 1 cut(s) 370
CviAII CATG 7 cut(s) 59, 314, 329, 857, 896, 1056, 1439
CviQI GTAC 1 cut(s) 604
DdeI CTNAG 2 cut(s) 503, 618
DpnI GATC 7 cut(s) 277, 361, 644, 1031, 1049, 1245, 1256
DpnII GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
DrdI GACNNNNNNGTC 1 cut(s) 371
DriI GACNNNNNGTC 1 cut(s) 598
DseDI GACNNNNNNGTC 1 cut(s) 371
EaeI YGGCCR 2 cut(s) 407, 801
Eam1104I CTCTTC 1 cut(s) 972
Eam1105I GACNNNNNGTC 1 cut(s) 598
EarI CTCTTC 1 cut(s) 972
Eco130I CCWWGG 2 cut(s) 52, 1055
Eco24I GRGCYC 1 cut(s) 967
Eco31I GGTCTC 1 cut(s) 989
Eco47I GGWCC 3 cut(s) 73, 456, 816
Eco88I CYCGRG 1 cut(s) 129
EcoRI GAATTC 1 cut(s) 1123
EcoRII CCWGG 1 cut(s) 565
EcoT14I CCWWGG 2 cut(s) 52, 1055
EcoT38I GRGCYC 1 cut(s) 967
ErhI CCWWGG 2 cut(s) 52, 1055
FaeI CATG 7 cut(s) 62, 317, 332, 860, 899, 1059, 1442
FaqI GGGAC 2 cut(s) 142, 150
FatI CATG 7 cut(s) 58, 313, 328, 856, 895, 1055, 1438
FauI CCCGC 2 cut(s) 54, 1096
FauNDI CATATG 1 cut(s) 754
FblI GTMKAC 1 cut(s) 1212
Fnu4HI GCNGC 2 cut(s) 103, 886
FokI GGATG 3 cut(s) 347, 1131, 1379
FriOI GRGCYC 1 cut(s) 967
Fsp4HI GCNGC 2 cut(s) 103, 886
FspAI RTGCGCAY 1 cut(s) 894
FspBI CTAG 3 cut(s) 353, 1205, 1474
FspI TGCGCA 1 cut(s) 894
GlaI GCGC 1 cut(s) 894
GluI GCNGC 2 cut(s) 103, 886
GsaI CCCAGC 2 cut(s) 71, 326
HaeIII GGCC 5 cut(s) 57, 409, 765, 803, 973
HapII CCGG 2 cut(s) 130, 371
HhaI GCGC 1 cut(s) 895
Hin1II CATG 7 cut(s) 62, 317, 332, 860, 899, 1059, 1442
Hin6I GCGC 1 cut(s) 893
HinP1I GCGC 1 cut(s) 893
HincII GTYRAC 4 cut(s) 124, 193, 1179, 1213
HindII GTYRAC 4 cut(s) 124, 193, 1179, 1213
HinfI GANTC 7 cut(s) 267, 713, 808, 821, 860, 948, 1401
HpaI GTTAAC 1 cut(s) 193
HpaII CCGG 2 cut(s) 130, 371
HphI GGTGA 3 cut(s) 1183, 1282, 1294
Hpy166II GTNNAC 7 cut(s) 124, 139, 193, 786, 1179, 1213, 1285
Hpy188I TCNGA 8 cut(s) 359, 364, 506, 679, 718, 820, 1097, 1200
Hpy188III TCNNGA 7 cut(s) 167, 530, 704, 787, 1033, 1228, 1342
Hpy8I GTNNAC 7 cut(s) 124, 139, 193, 786, 1179, 1213, 1285
Hpy99I CGWCG 3 cut(s) 191, 254, 1217
HpyAV CCTTC 4 cut(s) 296, 617, 1216, 1273
HpyCH4III ACNGT 6 cut(s) 112, 254, 700, 799, 830, 1289
HpyCH4IV ACGT 4 cut(s) 189, 232, 626, 1413
HpyCH4V TGCA 6 cut(s) 239, 313, 736, 758, 856, 1361
HpyF10VI GCNNNNNNNGC 2 cut(s) 742, 951
HpyF3I CTNAG 2 cut(s) 503, 618
HpySE526I ACGT 4 cut(s) 189, 232, 626, 1413
Hsp92II CATG 7 cut(s) 62, 317, 332, 860, 899, 1059, 1442
HspAI GCGC 1 cut(s) 893
KspAI GTTAAC 1 cut(s) 193
Kzo9I GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 2 cut(s) 54, 992
Lsp1109I GCAGC 1 cut(s) 897
LweI GCATC 1 cut(s) 104
MaeI CTAG 3 cut(s) 353, 1205, 1474
MaeII ACGT 4 cut(s) 189, 232, 626, 1413
MaeIII GTNAC 5 cut(s) 112, 373, 515, 622, 692
MalI GATC 7 cut(s) 277, 361, 644, 1031, 1049, 1245, 1256
MbiI CCGCTC 1 cut(s) 49
MboI GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
MboII GAAGA 6 cut(s) 190, 194, 674, 959, 1034, 1382
MfeI CAATTG 1 cut(s) 579
MhlI GDGCHC 1 cut(s) 967
MlsI TGGCCA 2 cut(s) 409, 803
MluCI AATT 3 cut(s) 579, 1068, 1123
MluNI TGGCCA 2 cut(s) 409, 803
MlyI GAGTC 2 cut(s) 817, 957
MmeI TCCRAC 2 cut(s) 387, 1014
Mox20I TGGCCA 2 cut(s) 409, 803
MroXI GAANNNNTTC 2 cut(s) 306, 465
MscI TGGCCA 2 cut(s) 409, 803
MseI TTAA 8 cut(s) 192, 476, 669, 1106, 1233, 1292, 1416, 1460
MslI CAYNNNNRTG 2 cut(s) 333, 1162
Msp20I TGGCCA 2 cut(s) 409, 803
MspA1I CMGCKG 1 cut(s) 71
MspI CCGG 2 cut(s) 130, 371
MspR9I CCNGG 3 cut(s) 130, 131, 567
MunI CAATTG 1 cut(s) 579
Mva1269I GAATGC 1 cut(s) 1333
MvaI CCWGG 1 cut(s) 567
MwoI GCNNNNNNNGC 2 cut(s) 742, 951
NciI CCSGG 2 cut(s) 130, 131
NcoI CCATGG 1 cut(s) 1055
NdeI CATATG 1 cut(s) 754
NdeII GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
NlaIII CATG 7 cut(s) 62, 317, 332, 860, 899, 1059, 1442
NmuCI GTSAC 4 cut(s) 112, 373, 515, 622
NsbI TGCGCA 1 cut(s) 894
NspI RCATGY 2 cut(s) 317, 899
PaeI GCATGC 1 cut(s) 899
PciSI GCTCTTC 1 cut(s) 972
PctI GAATGC 1 cut(s) 1333
PdmI GAANNNNTTC 2 cut(s) 306, 465
PfeI GAWTC 5 cut(s) 267, 713, 821, 860, 1401
PinAI ACCGGT 1 cut(s) 370
PkrI GCNGC 2 cut(s) 104, 887
Ple19I CGATCG 1 cut(s) 1246
PleI GAGTC 2 cut(s) 816, 956
PpsI GAGTC 2 cut(s) 816, 956
PshAI GACNNNNGTC 1 cut(s) 119
Psp6I CCWGG 1 cut(s) 565
PspFI CCCAGC 2 cut(s) 67, 322
PspGI CCWGG 1 cut(s) 565
PspPI GGNCC 4 cut(s) 73, 456, 764, 816
PvuI CGATCG 1 cut(s) 1246
RgaI GCGATCGC 1 cut(s) 1246
RsaI GTAC 1 cut(s) 605
RsaNI GTAC 1 cut(s) 604
RseI CAYNNNNRTG 2 cut(s) 333, 1162
SalI GTCGAC 1 cut(s) 1211
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 8 cut(s) 192, 476, 669, 1106, 1233, 1292, 1416, 1460
SatI GCNGC 2 cut(s) 103, 886
Sau3AI GATC 7 cut(s) 275, 359, 642, 1029, 1047, 1243, 1254
Sau96I GGNCC 4 cut(s) 73, 456, 764, 816
SchI GAGTC 2 cut(s) 817, 957
ScrFI CCNGG 3 cut(s) 130, 131, 567
SduI GDGCHC 1 cut(s) 967
SfaAI GCGATCGC 1 cut(s) 1246
SfaNI GCATC 1 cut(s) 104
SgfI GCGATCGC 1 cut(s) 1246
SinI GGWCC 3 cut(s) 73, 456, 816
SmaI CCCGGG 1 cut(s) 131
SmiMI CAYNNNNRTG 2 cut(s) 333, 1162
SpeI ACTAGT 2 cut(s) 352, 1204
SphI GCATGC 1 cut(s) 899
Sse9I AATT 3 cut(s) 579, 1068, 1123
SsiI CCGC 5 cut(s) 47, 71, 102, 1089, 1116
SspI AATATT 1 cut(s) 1131
SspMI CTAG 3 cut(s) 353, 1205, 1474
StyD4I CCNGG 3 cut(s) 128, 129, 565
StyI CCWWGG 2 cut(s) 52, 1055
TaaI ACNGT 6 cut(s) 112, 254, 700, 799, 830, 1289
TaiI ACGT 4 cut(s) 192, 235, 629, 1416
TaqI TCGA 5 cut(s) 270, 555, 834, 1212, 1399
TaqII GACCGA 2 cut(s) 288, 473
TasI AATT 3 cut(s) 579, 1068, 1123
TauI GCSGC 1 cut(s) 105
TfiI GAWTC 5 cut(s) 267, 713, 821, 860, 1401
Tru1I TTAA 8 cut(s) 192, 476, 669, 1106, 1233, 1292, 1416, 1460
Tru9I TTAA 8 cut(s) 192, 476, 669, 1106, 1233, 1292, 1416, 1460
TscAI CASTG 1 cut(s) 117
TseFI GTSAC 4 cut(s) 112, 373, 515, 622
TseI GCWGC 1 cut(s) 885
Tsp45I GTSAC 4 cut(s) 112, 373, 515, 622
TspDTI ATGAA 5 cut(s) 351, 673, 1368, 1383, 1393
TspGWI ACGGA 1 cut(s) 619
TspMI CCCGGG 1 cut(s) 129
TspRI CASTG 1 cut(s) 117
VpaK11BI GGWCC 3 cut(s) 73, 456, 816
XapI RAATTY 1 cut(s) 1123
XceI RCATGY 2 cut(s) 317, 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 1436
XmaI CCCGGG 1 cut(s) 129
XmiI GTMKAC 1 cut(s) 1212
XmnI GAANNNNTTC 2 cut(s) 306, 465
XspI CTAG 3 cut(s) 353, 1205, 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.