Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002191

Physical Location & Seq

Genomic Coordinates Forward (+)

23539540 .. 23541613

Gene Structure 2074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G233400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGAAAACAATACATCAAAACATCCTCATGCTGTCATATTTCCCTACCCTCTACAAGGCCATGTAATCCCAGCCGTCCATCTTGCCATAAAGCTTGCATCAAAAGGCATCACAGTCACCTTTGTCAACACTCAAGCAGTTCACCACCAGATAGTAAAGTCCCACGCCATGGAAGATGATAATATTTTCAATGGGGTTCGTCAATCTGGCCTAGACATACATTATGTAACAATCAATGATGGCTTCCCGGTCGACTTCGATCGATCTCTCAACCACGACCAGTTTTGGGAGAGTGTTCTACATGATTTCCCGGCTCATGTTGACGAGCTTCTAGCAAAACTAGTCCTCTCCAACCCACCAGTCAATTGCTTGATATCAGATACTTTCTTTGTGTGGCCAACAATCATAGCCAAAAAGTATAACCTAGTCACTGTCTCATTCTGGACCGAACCAGCTCTGATCTTCAACCTCTACTATCACGTAGACCTCCTCAACAAAAATGGTCATGGTCATTTTACTTCTCATGCTAATCCTCGCCAAGACACCATCGATTACATACCGGGTGTGCGTGCAATTGAACCAAAGGACTTGTCATCGTACCTTCAACCTAGTGATTACACTTCACCAGTACACCGCATCATAGTCAAGGCCTTTGAGAAAATTAAAACCGCAGATTTCATTCTTTGTAACACAGTCCAAGAGCTTGAATCTGAGACCGTTTCAGCCTTGCAAGAAAAGCAACAAATATATTCAATTGGACCAATATTTCCCACCGGGTTCACCAAGAGCCGTGTGGCCACAAGCCTGTGGTCCGAGTCAGATTGCATCCAATGGCTCAGCACTAGGTCACGTGGCTCAGTTTTGTACGTGTCATTTGGTAGCTATGCTCATGCTAGCAAAAGAGAAATCGAGGAAATAGCCAATGGGCTTTTGCTCAGCAAAGTTGGTTTTATTTGGGTACTTCGTCCTGATATAGTCAGCTCTGACGAACCCGAAATCCTACCCTTTGGATTTGAAGATGAGATAAAAGATCAAGAGCAAGGGTTGATTGTGCCATGGTGCTCTCAGATTGAGGTGATCTCACACCCTGCAATTGGAGGCTTCATAACACATTGTGGATGGAATTCAATATTGGAAAGCATATGGTGCAATCTTCCCTTGTTGTGTTTTCCTTTGTTGACTGACCAATTCACTAATAGGAAATTAGTGGTTGATGATTGGAGGGTTGGGCTTAATCTTTGTGACCAAAAACCAATCACAAAGGAGGAAGTGGCAGAGAAGATCAGCCATTTGATGAGTGGAAAATCAGCTGATGAATTGAGGAGGAATGTCAAGGAGGTCAGAAAAGCATTGGAGGGTGCATTGGCTATTGGTGGGTCATCACACAGAAATCTTGATCAGTTCATAGATGGTGTGAAGGCTAAAGTCCAAGAGAAAACTGGGTTTGGCTTCAACAACACTGAAGTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

491

Amino Acids

55.13

Weight (kDa)

5.76

Isoelectric Point (pI)

40.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36970
fragaria_vesca	FvH4_6g16230 FvH4_6g16230 FvH4_6g16250
malus_domestica	MD12G1114000.v1.1 MD12G1114100.v1.1 MD12G1114200.v1.1
prunus_persica	Prupe.6G233100_v2.0.a1 Prupe.6G233200_v2.0.a1 Prupe.6G233300_v2.0.a1 Prupe.6G233400_v2.0.a1 Prupe.6G233500_v2.0.a1 Prupe.6G233600_v2.0.a1 Prupe.6G233600_v2.0.a1
pyrus_communis	pycom12g11320 pycom12g11330 pycom12g11340
rosa_chinensis	RchiOBHm_Chr3g0470071 RchiOBHm_Chr3g0470101 RchiOBHm_Chr3g0470111
rosa_laevigata	RLG00000024296 RLG00000024298 RLG00000024299
rosa_multiflora	Rmu_sc0005600.1_g000011 Rmu_sc0005600.1_g000012 Rmu_sc0009114.1_g000016
rosa_roxburghii	Rroxscaffold_6G00411170 Rroxscaffold_6G00411180 Rroxscaffold_6G00411200
rosa_rugosa	Rorug03G0106700 Rorug03G0106700
rosa_samantha	Rh3AG155900 Rh3AG156200 Rh3BG180100 Rh3BG180200 Rh3CG170600 Rh3CG171000 Rh3DG195100
rosa_wichuraiana	Rw3G014680 Rw3G014690 Rw3G014700 Rw3G014760 Rw3G014770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	169
AccI	GTMKAC	2 cut(s)	252, 483
AciI	CCGC	2 cut(s)	634, 669
AcoI	YGGCCR	2 cut(s)	395, 795
AcsI	RAATTY	1 cut(s)	1123
AcvI	CACGTG	1 cut(s)	851
AdeI	CACNNNGTG	1 cut(s)	1115
AfaI	GTAC	4 cut(s)	599, 630, 866, 960
AfiI	CCNNNNNNNGG	4 cut(s)	56, 169, 286, 1094
AflIII	ACRYGT	1 cut(s)	867
AgsI	TTSAA	9 cut(s)	190, 466, 578, 605, 707, 753, 1016, 1128, 1453
AhlI	ACTAGT	1 cut(s)	340
AjuI	GAANNNNNNNTTGG	2 cut(s)	1115, 1147
AloI	GAACNNNNNNTCC	2 cut(s)	981, 1013
AluBI	AGCT	7 cut(s)	94, 328, 455, 703, 882, 981, 1310
AluI	AGCT	7 cut(s)	94, 328, 455, 703, 882, 981, 1310
Alw21I	GWGCWC	1 cut(s)	1064
Alw26I	GTCTC	2 cut(s)	439, 707
AoxI	GGCC	5 cut(s)	58, 208, 395, 648, 795
ApoI	RAATTY	1 cut(s)	1123
ArsI	GACNNNNNNTTYG	2 cut(s)	575, 607
AspS9I	GGNCC	3 cut(s)	444, 758, 810
AsuC2I	CCSGG	4 cut(s)	248, 311, 561, 775
AsuHPI	GGTGA	5 cut(s)	109, 134, 615, 772, 1087
AsuNHI	GCTAGC	1 cut(s)	893
AvaII	GGWCC	3 cut(s)	444, 758, 810
BalI	TGGCCA	2 cut(s)	397, 797
BbrPI	CACGTG	1 cut(s)	851
Bbv12I	GWGCWC	1 cut(s)	1064
BccI	CCATC	5 cut(s)	87, 233, 554, 1113, 1403
BceAI	ACGGC	2 cut(s)	59, 774
BclI	TGATCA	1 cut(s)	1396
BcnI	CCSGG	4 cut(s)	248, 311, 561, 775
BcoDI	GTCTC	2 cut(s)	439, 707
BcuI	ACTAGT	1 cut(s)	340
BfaI	CTAG	8 cut(s)	212, 332, 341, 425, 609, 843, 894, 1471
BlpI	GCTNAGC	2 cut(s)	836, 935
Bme1390I	CCNGG	4 cut(s)	248, 311, 561, 775
Bme18I	GGWCC	3 cut(s)	444, 758, 810
BmgT120I	GGNCC	3 cut(s)	444, 758, 810
BmrFI	CCNGG	4 cut(s)	248, 311, 561, 775
BmrI	ACTGGG	1 cut(s)	1449
BmsI	GCATC	4 cut(s)	107, 117, 645, 834
BmtI	GCTAGC	1 cut(s)	897
BmuI	ACTGGG	1 cut(s)	1449
BplI	GAGNNNNNCTC	2 cut(s)	1064, 1096
Bpu1102I	GCTNAGC	2 cut(s)	836, 935
BpuEI	CTTGAG	1 cut(s)	117
BpuMI	CCSGG	4 cut(s)	248, 311, 561, 775
Bsa29I	ATCGAT	2 cut(s)	262, 549
BsaAI	YACGTR	3 cut(s)	481, 851, 868
BsaI	GGTCTC	1 cut(s)	707
BsaJI	CCNNGG	2 cut(s)	168, 1055
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 169, 286, 1094
Bse1I	ACTGG	4 cut(s)	280, 359, 626, 1444
BseCI	ATCGAT	2 cut(s)	262, 549
BseDI	CCNNGG	2 cut(s)	168, 1055
BseGI	GGATG	3 cut(s)	22, 825, 1124
BseLI	CCNNNNNNNGG	4 cut(s)	56, 169, 286, 1094
BseMII	CTCAG	5 cut(s)	702, 850, 870, 949, 1079
BseNI	ACTGG	4 cut(s)	280, 359, 626, 1444
BseRI	GAGGAG	2 cut(s)	479, 1336
BseYI	CCCAGC	1 cut(s)	70
Bsh1285I	CGRYCG	2 cut(s)	252, 262
BshFI	GGCC	5 cut(s)	60, 210, 397, 650, 797
BshVI	ATCGAT	2 cut(s)	262, 549
BsiEI	CGRYCG	2 cut(s)	252, 262
BsiHKAI	GWGCWC	1 cut(s)	1064
BsiSI	CCGG	4 cut(s)	248, 311, 560, 774
BslFI	GGGAC	1 cut(s)	145
BslI	CCNNNNNNNGG	4 cut(s)	56, 169, 286, 1094
BsmAI	GTCTC	2 cut(s)	439, 707
BsmFI	GGGAC	1 cut(s)	145
BsnI	GGCC	5 cut(s)	60, 210, 397, 650, 797
Bso31I	GGTCTC	1 cut(s)	707
Bsp1286I	GDGCHC	1 cut(s)	1064
Bsp143I	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
Bsp1720I	GCTNAGC	2 cut(s)	836, 935
Bsp19I	CCATGG	2 cut(s)	168, 1055
BspACI	CCGC	2 cut(s)	634, 669
BspANI	GGCC	5 cut(s)	60, 210, 397, 650, 797
BspCNI	CTCAG	5 cut(s)	703, 849, 869, 948, 1078
BspDI	ATCGAT	2 cut(s)	262, 549
BspOI	GCTAGC	1 cut(s)	897
BspTNI	GGTCTC	1 cut(s)	707
BsrI	ACTGG	4 cut(s)	280, 359, 626, 1444
BssECI	CCNNGG	2 cut(s)	168, 1055
BssMI	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
BssT1I	CCWWGG	2 cut(s)	168, 1055
Bst4CI	ACNGT	4 cut(s)	115, 433, 694, 718
BstAPI	GCANNNNNTGC	1 cut(s)	1146
BstBAI	YACGTR	3 cut(s)	481, 851, 868
BstC8I	GCNNGC	3 cut(s)	96, 570, 895
BstDEI	CTNAG	5 cut(s)	711, 836, 856, 935, 1065
BstDSI	CCRYGG	2 cut(s)	168, 1055
BstENI	CCTNNNNNAGG	1 cut(s)	54
BstF5I	GGATG	3 cut(s)	22, 825, 1124
BstKTI	GATC	7 cut(s)	262, 266, 462, 1033, 1080, 1284, 1399
BstMAI	GTCTC	2 cut(s)	439, 707
BstMBI	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
BstMCI	CGRYCG	2 cut(s)	252, 262
BstMWI	GCNNNNNNNGC	2 cut(s)	736, 1146
BstSCI	CCNGG	4 cut(s)	246, 309, 559, 773
Bsu15I	ATCGAT	2 cut(s)	262, 549
BsuRI	GGCC	5 cut(s)	60, 210, 397, 650, 797
BsuTUI	ATCGAT	2 cut(s)	262, 549
BtgI	CCRYGG	2 cut(s)	168, 1055
BtsCI	GGATG	3 cut(s)	22, 825, 1124
BtsIMutI	CAGTG	2 cut(s)	429, 1458
Cac8I	GCNNGC	3 cut(s)	96, 570, 895
Cfr13I	GGNCC	3 cut(s)	444, 758, 810
ClaI	ATCGAT	2 cut(s)	262, 549
Csp6I	GTAC	4 cut(s)	598, 629, 865, 959
CviAII	CATG	9 cut(s)	29, 62, 169, 302, 317, 506, 524, 890, 1056
CviQI	GTAC	4 cut(s)	598, 629, 865, 959
DdeI	CTNAG	5 cut(s)	711, 836, 856, 935, 1065
DpnI	GATC	7 cut(s)	261, 265, 461, 1032, 1079, 1283, 1398
DpnII	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
DraIII	CACNNNGTG	1 cut(s)	1115
EaeI	YGGCCR	2 cut(s)	395, 795
Eco130I	CCWWGG	2 cut(s)	168, 1055
Eco147I	AGGCCT	1 cut(s)	650
Eco31I	GGTCTC	1 cut(s)	707
Eco32I	GATATC	1 cut(s)	375
Eco47I	GGWCC	3 cut(s)	444, 758, 810
Eco72I	CACGTG	1 cut(s)	851
EcoNI	CCTNNNNNAGG	1 cut(s)	54
EcoRI	GAATTC	1 cut(s)	1123
EcoRV	GATATC	1 cut(s)	375
EcoT14I	CCWWGG	2 cut(s)	168, 1055
ErhI	CCWWGG	2 cut(s)	168, 1055
FaeI	CATG	9 cut(s)	32, 65, 172, 305, 320, 509, 527, 893, 1059
FaqI	GGGAC	1 cut(s)	145
FatI	CATG	9 cut(s)	28, 61, 168, 301, 316, 505, 523, 889, 1055
FauNDI	CATATG	1 cut(s)	1142
FbaI	TGATCA	1 cut(s)	1396
FblI	GTMKAC	2 cut(s)	252, 483
FokI	GGATG	3 cut(s)	9, 812, 1131
FspBI	CTAG	8 cut(s)	212, 332, 341, 425, 609, 843, 894, 1471
GsaI	CCCAGC	1 cut(s)	74
HaeIII	GGCC	5 cut(s)	60, 210, 397, 650, 797
HapII	CCGG	4 cut(s)	248, 311, 560, 774
Hin1II	CATG	9 cut(s)	32, 65, 172, 305, 320, 509, 527, 893, 1059
HincII	GTYRAC	4 cut(s)	127, 253, 322, 1179
HindII	GTYRAC	4 cut(s)	127, 253, 322, 1179
HindIII	AAGCTT	1 cut(s)	92
HinfI	GANTC	2 cut(s)	707, 815
HpaII	CCGG	4 cut(s)	248, 311, 560, 774
HphI	GGTGA	5 cut(s)	109, 134, 615, 772, 1087
Hpy166II	GTNNAC	8 cut(s)	127, 142, 253, 322, 484, 631, 780, 1179
Hpy188I	TCNGA	8 cut(s)	379, 459, 712, 814, 820, 985, 1068, 1343
Hpy188III	TCNNGA	4 cut(s)	442, 968, 1034, 1394
Hpy8I	GTNNAC	8 cut(s)	127, 142, 253, 322, 484, 631, 780, 1179
HpyAV	CCTTC	2 cut(s)	611, 1411
HpyCH4III	ACNGT	4 cut(s)	115, 433, 694, 718
HpyCH4IV	ACGT	3 cut(s)	480, 850, 867
HpyCH4V	TGCA	7 cut(s)	98, 572, 730, 825, 1091, 1149, 1361
HpyF10VI	GCNNNNNNNGC	2 cut(s)	736, 1146
HpyF3I	CTNAG	5 cut(s)	711, 836, 856, 935, 1065
HpySE526I	ACGT	3 cut(s)	480, 850, 867
Hsp92II	CATG	9 cut(s)	32, 65, 172, 305, 320, 509, 527, 893, 1059
Ksp22I	TGATCA	1 cut(s)	1396
Kzo9I	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
LweI	GCATC	4 cut(s)	107, 117, 645, 834
MaeI	CTAG	8 cut(s)	212, 332, 341, 425, 609, 843, 894, 1471
MaeII	ACGT	3 cut(s)	480, 850, 867
MaeIII	GTNAC	6 cut(s)	115, 226, 427, 686, 846, 1241
MalI	GATC	7 cut(s)	261, 265, 461, 1032, 1079, 1283, 1398
MboI	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
MboII	GAAGA	5 cut(s)	185, 454, 1028, 1145, 1291
MfeI	CAATTG	4 cut(s)	364, 573, 753, 1092
MhlI	GDGCHC	1 cut(s)	1064
MlsI	TGGCCA	2 cut(s)	397, 797
MluCI	AATT	9 cut(s)	364, 573, 660, 753, 1092, 1123, 1187, 1202, 1316
MluNI	TGGCCA	2 cut(s)	397, 797
MlyI	GAGTC	1 cut(s)	824
MmeI	TCCRAC	1 cut(s)	375
Mox20I	TGGCCA	2 cut(s)	397, 797
MscI	TGGCCA	2 cut(s)	397, 797
MseI	TTAA	2 cut(s)	663, 1233
MslI	CAYNNNNRTG	1 cut(s)	27
Msp20I	TGGCCA	2 cut(s)	397, 797
MspA1I	CMGCKG	1 cut(s)	1310
MspI	CCGG	4 cut(s)	248, 311, 560, 774
MspR9I	CCNGG	4 cut(s)	248, 311, 561, 775
MunI	CAATTG	4 cut(s)	364, 573, 753, 1092
MwoI	GCNNNNNNNGC	2 cut(s)	736, 1146
NciI	CCSGG	4 cut(s)	248, 311, 561, 775
NcoI	CCATGG	2 cut(s)	168, 1055
NdeI	CATATG	1 cut(s)	1142
NdeII	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
NheI	GCTAGC	1 cut(s)	893
NlaIII	CATG	9 cut(s)	32, 65, 172, 305, 320, 509, 527, 893, 1059
NmuCI	GTSAC	4 cut(s)	115, 427, 846, 1241
PceI	AGGCCT	1 cut(s)	650
PfeI	GAWTC	1 cut(s)	707
PflMI	CCANNNNNTGG	1 cut(s)	169
Ple19I	CGATCG	1 cut(s)	262
PleI	GAGTC	1 cut(s)	823
PmaCI	CACGTG	1 cut(s)	851
PmlI	CACGTG	1 cut(s)	851
PpsI	GAGTC	1 cut(s)	823
Ppu21I	YACGTR	3 cut(s)	481, 851, 868
PspCI	CACGTG	1 cut(s)	851
PspFI	CCCAGC	1 cut(s)	70
PspPI	GGNCC	3 cut(s)	444, 758, 810
PvuI	CGATCG	1 cut(s)	262
PvuII	CAGCTG	1 cut(s)	1310
RsaI	GTAC	4 cut(s)	599, 630, 866, 960
RsaNI	GTAC	4 cut(s)	598, 629, 865, 959
RseI	CAYNNNNRTG	1 cut(s)	27
SalI	GTCGAC	1 cut(s)	251
SaqAI	TTAA	2 cut(s)	663, 1233
Sau3AI	GATC	7 cut(s)	259, 263, 459, 1030, 1077, 1281, 1396
Sau96I	GGNCC	3 cut(s)	444, 758, 810
SchI	GAGTC	1 cut(s)	824
ScrFI	CCNGG	4 cut(s)	248, 311, 561, 775
SduI	GDGCHC	1 cut(s)	1064
SfaNI	GCATC	4 cut(s)	107, 117, 645, 834
SinI	GGWCC	3 cut(s)	444, 758, 810
SmiMI	CAYNNNNRTG	1 cut(s)	27
SmlI	CTYRAG	1 cut(s)	132
SmoI	CTYRAG	1 cut(s)	132
SpeI	ACTAGT	1 cut(s)	340
Sse9I	AATT	9 cut(s)	364, 573, 660, 753, 1092, 1123, 1187, 1202, 1316
SseBI	AGGCCT	1 cut(s)	650
SsiI	CCGC	2 cut(s)	634, 669
SspI	AATATT	3 cut(s)	184, 765, 1131
SspMI	CTAG	8 cut(s)	212, 332, 341, 425, 609, 843, 894, 1471
StuI	AGGCCT	1 cut(s)	650
StyD4I	CCNGG	4 cut(s)	246, 309, 559, 773
StyI	CCWWGG	2 cut(s)	168, 1055
TaaI	ACNGT	4 cut(s)	115, 433, 694, 718
TaiI	ACGT	3 cut(s)	483, 853, 870
TaqI	TCGA	5 cut(s)	252, 258, 262, 549, 909
TaqII	GACCGA	1 cut(s)	461
TasI	AATT	9 cut(s)	364, 573, 660, 753, 1092, 1123, 1187, 1202, 1316
TatI	WGTACW	1 cut(s)	628
TfiI	GAWTC	1 cut(s)	707
Tru1I	TTAA	2 cut(s)	663, 1233
Tru9I	TTAA	2 cut(s)	663, 1233
TscAI	CASTG	2 cut(s)	436, 1465
TseFI	GTSAC	4 cut(s)	115, 427, 846, 1241
Tsp45I	GTSAC	4 cut(s)	115, 427, 846, 1241
TspDTI	ATGAA	4 cut(s)	667, 1093, 1329, 1393
TspRI	CASTG	2 cut(s)	436, 1465
Van91I	CCANNNNNTGG	1 cut(s)	169
VpaK11BI	GGWCC	3 cut(s)	444, 758, 810
XagI	CCTNNNNNAGG	1 cut(s)	54
XapI	RAATTY	1 cut(s)	1123
XcmI	CCANNNNNNNNNTGG	3 cut(s)	790, 1295, 1436
XmiI	GTMKAC	2 cut(s)	252, 483
XspI	CTAG	8 cut(s)	212, 332, 341, 425, 609, 843, 894, 1471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.