Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002191

Physical Location & Seq

Genomic Coordinates Reverse (-)

23542567 .. 23544574

Gene Structure 2008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G233500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGGAGGAGGACAATCAATGCACAAAGCCTCATGCAATCTTGGTACCTCTCCCTCTCCAAGGCCATGTTATCCCATTTACCAATCTGGCAATGAAGCTTGCTTCAAATGGTTTCACCATCACTTTTGTCAACACTCAATATATTCACCACCAGATAACCAAATCCCAACCCAACAACAAAACTGAACAAGATGACATCTTTGCCGCAGCGCGCAAGTCCGGACTGGACATACGCTACAAAACAGTGAGTGATGGTTTTCCACTAGCCTTCAACCGATTTCAGAACCTTGACCAATGTCTTGAGGGTCATTTACATGTCTACCCTGCCCATGTTGATGAACTGGTTGGAGATTTAGTCCAATCTGACCCCTCAATCACTTGCTTTATTGCTGATACCTTCCACACCTGGCCAGAAACCATAGCCAACAAGTACAACCTTGTCAATGTTTCCTTTTGGACTGAACCAGCTTTAGTCCTAAGCATCTACTATCACTTGGACCTCCTCAGACAAAATGGTCATTTTGGTTTTCATGATAAACGTGAGGACATCATCGATTACATACCGGGTGTGCAGGCAATTGAACCAAAAGACTTGATGTCACATCTCCAAGCTACTGATTTATTATCCCCAATGCACAGAATCATTTACAAGGCATTCCATGAAGTTAAAAGAGCAGATTTTATTTTGATTAATACAGTGCAAGAACTTGAATCTGAGACCCTTTCAGCCTTGCATGAGAAGCAGCCCACTTATGCAATTGGCCCTGTCTTCCCCAGTAAAACTACTAAGAGTATTGTGGCTACCAATCTGATGTCTGAGTTTGACTGTACTCAATGGCTCAATGCCAAGCCTCATGGTTCAGTTTTGTTTATTTCATTTGGTAGTTATGCTCAAGTTACTACAAAAGATATTGAGGAAATAGCCCATGGACTTTTGCTTAGTAAAGTGAGCTTCATCTGGGTACTTCGTCCCGACACTACAAGTTATGAAGAAACCAATATCCTACCTGTTGGATTTGACGATGAGATTAAAGACAGAGGGATGATAGTGCCATGGTGCTCTCAGGTTAAGGTGCTTTCACATCCGGCAGTAGGAGGGTTCTTAACGCATTGTGGATGGAATTCCATACTTGAAAGTATGTGGTGTGGTGTTCCCATGCTGTGTTTTCCTCTATGGACTGACCAAATCACTAATAGGAAACTAGTAGTTGATGACTGGGGCATTGGACTGAATATTTGTGATGGGGTAAAACCCATCACAAGAGTGGAGGTGGCAGAGAAGATCAACCATGTGATGAGTGGAAAATTGGGCGATGGTTTGCAGAAGGAGATAAGAAATGTAAGGCAAACAATGGAGGATGCATTGGCTTTAAATGGGTCATCACAGAAGAATTTCTTTCAATTCATAATTGATGTAAAGACCAAAGTTCAGACACGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

481

Amino Acids

54.28

Weight (kDa)

5.77

Isoelectric Point (pI)

39.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36970
fragaria_vesca	FvH4_6g16230 FvH4_6g16230 FvH4_6g16250
malus_domestica	MD12G1114000.v1.1 MD12G1114100.v1.1 MD12G1114200.v1.1
prunus_persica	Prupe.6G233100_v2.0.a1 Prupe.6G233200_v2.0.a1 Prupe.6G233300_v2.0.a1 Prupe.6G233400_v2.0.a1 Prupe.6G233500_v2.0.a1 Prupe.6G233600_v2.0.a1 Prupe.6G233600_v2.0.a1
pyrus_communis	pycom12g11320 pycom12g11330 pycom12g11340
rosa_chinensis	RchiOBHm_Chr3g0470071 RchiOBHm_Chr3g0470101 RchiOBHm_Chr3g0470111
rosa_laevigata	RLG00000024296 RLG00000024298 RLG00000024299
rosa_multiflora	Rmu_sc0005600.1_g000011 Rmu_sc0005600.1_g000012 Rmu_sc0009114.1_g000016
rosa_roxburghii	Rroxscaffold_6G00411170 Rroxscaffold_6G00411180 Rroxscaffold_6G00411200
rosa_rugosa	Rorug03G0106700 Rorug03G0106700
rosa_samantha	Rh3AG155900 Rh3AG156200 Rh3BG180100 Rh3BG180200 Rh3CG170600 Rh3CG171000 Rh3DG195100
rosa_wichuraiana	Rw3G014680 Rw3G014690 Rw3G014700 Rw3G014760 Rw3G014770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	513
Acc65I	GGTACC	1 cut(s)	43
AccB1I	GGYRCC	1 cut(s)	43
AccI	GTMKAC	1 cut(s)	318
AccII	CGCG	1 cut(s)	211
AccIII	TCCGGA	1 cut(s)	218
AciI	CCGC	1 cut(s)	204
AcoI	YGGCCR	1 cut(s)	407
AcsI	RAATTY	2 cut(s)	1120, 1390
AfaI	GTAC	4 cut(s)	45, 431, 829, 963
AfiI	CCNNNNNNNGG	2 cut(s)	59, 1091
AflIII	ACRYGT	1 cut(s)	313
AgsI	TTSAA	6 cut(s)	105, 271, 581, 710, 1133, 1400
AhdI	GACNNNNNGTC	1 cut(s)	595
AhlI	ACTAGT	1 cut(s)	1201
AjnI	CCWGG	1 cut(s)	404
AleI	CACNNNNGTG	1 cut(s)	1262
AluBI	AGCT	4 cut(s)	97, 467, 611, 951
AluI	AGCT	4 cut(s)	97, 467, 611, 951
Alw21I	GWGCWC	1 cut(s)	1061
Alw26I	GTCTC	1 cut(s)	710
Aor13HI	TCCGGA	1 cut(s)	218
AoxI	GGCC	3 cut(s)	61, 407, 760
ApeKI	GCWGC	2 cut(s)	206, 742
ApoI	RAATTY	2 cut(s)	1120, 1390
ArsI	GACNNNNNNTTYG	2 cut(s)	1218, 1250
AseI	ATTAAT	1 cut(s)	690
Asp700I	GAANNNNTTC	1 cut(s)	1391
Asp718I	GGTACC	1 cut(s)	43
AspLEI	GCGC	2 cut(s)	211, 213
AspS9I	GGNCC	2 cut(s)	496, 761
AsuC2I	CCSGG	1 cut(s)	564
AsuHPI	GGTGA	2 cut(s)	106, 137
AvaII	GGWCC	1 cut(s)	496
BalI	TGGCCA	1 cut(s)	409
BanI	GGYRCC	1 cut(s)	43
BbsI	GAAGAC	1 cut(s)	760
Bbv12I	GWGCWC	1 cut(s)	1061
BbvI	GCAGC	2 cut(s)	218, 754
BccI	CCATC	6 cut(s)	125, 245, 1110, 1235, 1262, 1307
BciT130I	CCWGG	1 cut(s)	406
BcnI	CCSGG	1 cut(s)	564
BcoDI	GTCTC	1 cut(s)	710
BcuI	ACTAGT	1 cut(s)	1201
BfaI	CTAG	2 cut(s)	263, 1202
BisI	GCNGC	3 cut(s)	204, 207, 743
BlsI	GCNGC	3 cut(s)	205, 208, 744
Bme1390I	CCNGG	2 cut(s)	406, 564
Bme18I	GGWCC	1 cut(s)	496
BmeRI	GACNNNNNGTC	1 cut(s)	595
BmgT120I	GGNCC	2 cut(s)	496, 761
BmiI	GGNNCC	1 cut(s)	45
BmrFI	CCNGG	2 cut(s)	406, 564
BmrI	ACTGGG	2 cut(s)	768, 1225
BmsI	GCATC	2 cut(s)	489, 1348
BmuI	ACTGGG	2 cut(s)	768, 1225
BoxI	GACNNNNGTC	1 cut(s)	294
BpiI	GAAGAC	1 cut(s)	760
Bpu10I	CCTNAGC	1 cut(s)	476
BpuEI	CTTGAG	2 cut(s)	320, 876
BpuMI	CCSGG	1 cut(s)	564
Bsa29I	ATCGAT	1 cut(s)	552
BsaI	GGTCTC	1 cut(s)	710
BsaJI	CCNNGG	3 cut(s)	58, 925, 1052
BsaWI	WCCGGW	1 cut(s)	218
BsaXI	ACNNNNNCTCC	2 cut(s)	339, 369
Bsc4I	CCNNNNNNNGG	2 cut(s)	59, 1091
Bse1I	ACTGG	4 cut(s)	228, 345, 774, 1220
Bse3DI	GCAATG	1 cut(s)	96
BseAI	TCCGGA	1 cut(s)	218
BseBI	CCWGG	1 cut(s)	406
BseCI	ATCGAT	1 cut(s)	552
BseDI	CCNNGG	3 cut(s)	58, 925, 1052
BseGI	GGATG	4 cut(s)	1047, 1081, 1121, 1363
BseLI	CCNNNNNNNGG	2 cut(s)	59, 1091
BseMI	GCAATG	1 cut(s)	96
BseMII	CTCAG	4 cut(s)	517, 705, 807, 1076
BseNI	ACTGG	4 cut(s)	228, 345, 774, 1220
BsePI	GCGCGC	1 cut(s)	209
BseRI	GAGGAG	2 cut(s)	20, 491
BseXI	GCAGC	2 cut(s)	218, 754
BsgI	GTGCAG	1 cut(s)	590
Bsh1236I	CGCG	1 cut(s)	211
BshFI	GGCC	3 cut(s)	63, 409, 762
BshNI	GGYRCC	1 cut(s)	43
BshVI	ATCGAT	1 cut(s)	552
BsiHKAI	GWGCWC	1 cut(s)	1061
BsiSI	CCGG	3 cut(s)	219, 563, 1085
BslFI	GGGAC	1 cut(s)	954
BslI	CCNNNNNNNGG	2 cut(s)	59, 1091
BsmAI	GTCTC	1 cut(s)	710
BsmFI	GGGAC	1 cut(s)	954
BsmI	GAATGC	1 cut(s)	653
BsnI	GGCC	3 cut(s)	63, 409, 762
Bso31I	GGTCTC	1 cut(s)	710
Bsp1286I	GDGCHC	1 cut(s)	1061
Bsp13I	TCCGGA	1 cut(s)	218
Bsp143I	GATC	1 cut(s)	1281
Bsp19I	CCATGG	2 cut(s)	925, 1052
BspACI	CCGC	1 cut(s)	204
BspANI	GGCC	3 cut(s)	63, 409, 762
BspCNI	CTCAG	4 cut(s)	516, 706, 808, 1075
BspDI	ATCGAT	1 cut(s)	552
BspEI	TCCGGA	1 cut(s)	218
BspFNI	CGCG	1 cut(s)	211
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	1 cut(s)	45
BspT107I	GGYRCC	1 cut(s)	43
BspTNI	GGTCTC	1 cut(s)	710
BsrDI	GCAATG	1 cut(s)	96
BsrI	ACTGG	4 cut(s)	228, 345, 774, 1220
BssECI	CCNNGG	3 cut(s)	58, 925, 1052
BssHII	GCGCGC	1 cut(s)	209
BssMI	GATC	1 cut(s)	1281
BssT1I	CCWWGG	3 cut(s)	58, 925, 1052
Bst2UI	CCWGG	1 cut(s)	406
Bst4CI	ACNGT	3 cut(s)	244, 697, 827
BstC8I	GCNNGC	3 cut(s)	99, 211, 573
BstDEI	CTNAG	7 cut(s)	476, 503, 714, 786, 816, 938, 1062
BstDSI	CCRYGG	2 cut(s)	925, 1052
BstENI	CCTNNNNNAGG	1 cut(s)	57
BstF5I	GGATG	4 cut(s)	1047, 1081, 1121, 1363
BstFNI	CGCG	1 cut(s)	211
BstHHI	GCGC	2 cut(s)	211, 213
BstKTI	GATC	1 cut(s)	1284
BstMAI	GTCTC	1 cut(s)	710
BstMBI	GATC	1 cut(s)	1281
BstMWI	GCNNNNNNNGC	1 cut(s)	739
BstNI	CCWGG	1 cut(s)	406
BstNSI	RCATGY	1 cut(s)	317
BstPAI	GACNNNNGTC	1 cut(s)	294
BstSCI	CCNGG	2 cut(s)	404, 562
BstUI	CGCG	1 cut(s)	211
BstV1I	GCAGC	2 cut(s)	218, 754
BstV2I	GAAGAC	1 cut(s)	760
Bsu15I	ATCGAT	1 cut(s)	552
BsuRI	GGCC	3 cut(s)	63, 409, 762
BsuTUI	ATCGAT	1 cut(s)	552
BtgI	CCRYGG	2 cut(s)	925, 1052
BtgZI	GCGATG	1 cut(s)	1326
BtsCI	GGATG	4 cut(s)	1047, 1081, 1121, 1363
BtsIMutI	CAGTG	2 cut(s)	249, 702
Cac8I	GCNNGC	3 cut(s)	99, 211, 573
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	2 cut(s)	211, 213
Cfr13I	GGNCC	2 cut(s)	496, 761
ClaI	ATCGAT	1 cut(s)	552
Csp6I	GTAC	4 cut(s)	44, 430, 828, 962
CviQI	GTAC	4 cut(s)	44, 430, 828, 962
DdeI	CTNAG	7 cut(s)	476, 503, 714, 786, 816, 938, 1062
DpnI	GATC	1 cut(s)	1283
DpnII	GATC	1 cut(s)	1281
DraI	TTTAAA	1 cut(s)	1371
DrdI	GACNNNNNNGTC	1 cut(s)	513
DriI	GACNNNNNGTC	1 cut(s)	595
DseDI	GACNNNNNNGTC	1 cut(s)	513
EaeI	YGGCCR	1 cut(s)	407
Eam1105I	GACNNNNNGTC	1 cut(s)	595
Eco130I	CCWWGG	3 cut(s)	58, 925, 1052
Eco31I	GGTCTC	1 cut(s)	710
Eco47I	GGWCC	1 cut(s)	496
EcoNI	CCTNNNNNAGG	1 cut(s)	57
EcoRI	GAATTC	1 cut(s)	1120
EcoRII	CCWGG	1 cut(s)	404
EcoT14I	CCWWGG	3 cut(s)	58, 925, 1052
EcoT22I	ATGCAT	1 cut(s)	1363
ErhI	CCWWGG	3 cut(s)	58, 925, 1052
FalI	AAGNNNNNCTT	2 cut(s)	1379, 1411
FaqI	GGGAC	1 cut(s)	954
FblI	GTMKAC	1 cut(s)	318
Fnu4HI	GCNGC	3 cut(s)	204, 207, 743
FokI	GGATG	4 cut(s)	1054, 1068, 1128, 1370
Fsp4HI	GCNGC	3 cut(s)	204, 207, 743
FspBI	CTAG	2 cut(s)	263, 1202
GlaI	GCGC	2 cut(s)	210, 212
GluI	GCNGC	3 cut(s)	204, 207, 743
HaeIII	GGCC	3 cut(s)	63, 409, 762
HapII	CCGG	3 cut(s)	219, 563, 1085
HhaI	GCGC	2 cut(s)	211, 213
Hin6I	GCGC	2 cut(s)	209, 211
HinP1I	GCGC	2 cut(s)	209, 211
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HindIII	AAGCTT	1 cut(s)	95
HinfI	GANTC	2 cut(s)	639, 710
HpaII	CCGG	3 cut(s)	219, 563, 1085
HphI	GGTGA	2 cut(s)	106, 137
Hpy166II	GTNNAC	2 cut(s)	130, 319
Hpy188I	TCNGA	7 cut(s)	282, 364, 506, 715, 810, 817, 1431
Hpy188III	TCNNGA	4 cut(s)	219, 299, 530, 971
Hpy8I	GTNNAC	2 cut(s)	130, 319
HpyAV	CCTTC	3 cut(s)	277, 406, 1318
HpyCH4III	ACNGT	3 cut(s)	244, 697, 827
HpyCH4IV	ACGT	1 cut(s)	538
HpyCH4V	TGCA	9 cut(s)	21, 35, 571, 634, 700, 733, 755, 1321, 1361
HpyF10VI	GCNNNNNNNGC	1 cut(s)	739
HpyF3I	CTNAG	7 cut(s)	476, 503, 714, 786, 816, 938, 1062
HpySE526I	ACGT	1 cut(s)	538
HspAI	GCGC	2 cut(s)	209, 211
Kpn2I	TCCGGA	1 cut(s)	218
KpnI	GGTACC	1 cut(s)	47
Kzo9I	GATC	1 cut(s)	1281
Lsp1109I	GCAGC	2 cut(s)	218, 754
LweI	GCATC	2 cut(s)	489, 1348
MaeI	CTAG	2 cut(s)	263, 1202
MaeII	ACGT	1 cut(s)	538
MaeIII	GTNAC	2 cut(s)	597, 895
MalI	GATC	1 cut(s)	1283
MboI	GATC	1 cut(s)	1281
MboII	GAAGA	4 cut(s)	760, 1001, 1291, 1399
MfeI	CAATTG	2 cut(s)	576, 756
MhlI	GDGCHC	1 cut(s)	1061
MlsI	TGGCCA	1 cut(s)	409
MluCI	AATT	7 cut(s)	576, 756, 1120, 1304, 1390, 1400, 1407
MluNI	TGGCCA	1 cut(s)	409
MmeI	TCCRAC	2 cut(s)	325, 991
Mox20I	TGGCCA	1 cut(s)	409
Mph1103I	ATGCAT	1 cut(s)	1363
MroI	TCCGGA	1 cut(s)	218
MroXI	GAANNNNTTC	1 cut(s)	1391
MscI	TGGCCA	1 cut(s)	409
MseI	TTAA	6 cut(s)	666, 690, 1029, 1068, 1103, 1370
MslI	CAYNNNNRTG	3 cut(s)	312, 333, 1262
Msp20I	TGGCCA	1 cut(s)	409
MspI	CCGG	3 cut(s)	219, 563, 1085
MspR9I	CCNGG	2 cut(s)	406, 564
MunI	CAATTG	2 cut(s)	576, 756
Mva1269I	GAATGC	1 cut(s)	653
MvaI	CCWGG	1 cut(s)	406
MvnI	CGCG	1 cut(s)	211
MwoI	GCNNNNNNNGC	1 cut(s)	739
NciI	CCSGG	1 cut(s)	564
NcoI	CCATGG	2 cut(s)	925, 1052
NdeII	GATC	1 cut(s)	1281
NlaIV	GGNNCC	1 cut(s)	45
NmuCI	GTSAC	1 cut(s)	597
NsiI	ATGCAT	1 cut(s)	1363
NspI	RCATGY	1 cut(s)	317
OliI	CACNNNNGTG	1 cut(s)	1262
PagI	TCATGA	1 cut(s)	529
PauI	GCGCGC	1 cut(s)	209
PciI	ACATGT	1 cut(s)	313
PctI	GAATGC	1 cut(s)	653
PdmI	GAANNNNTTC	1 cut(s)	1391
PfeI	GAWTC	2 cut(s)	639, 710
PkrI	GCNGC	3 cut(s)	205, 208, 744
PscI	ACATGT	1 cut(s)	313
PshAI	GACNNNNGTC	1 cut(s)	294
PshBI	ATTAAT	1 cut(s)	690
Psp6I	CCWGG	1 cut(s)	404
PspGI	CCWGG	1 cut(s)	404
PspN4I	GGNNCC	1 cut(s)	45
PspPI	GGNCC	2 cut(s)	496, 761
PteI	GCGCGC	1 cut(s)	209
RsaI	GTAC	4 cut(s)	45, 431, 829, 963
RsaNI	GTAC	4 cut(s)	44, 430, 828, 962
RseI	CAYNNNNRTG	3 cut(s)	312, 333, 1262
SaqAI	TTAA	6 cut(s)	666, 690, 1029, 1068, 1103, 1370
SatI	GCNGC	3 cut(s)	204, 207, 743
Sau3AI	GATC	1 cut(s)	1281
Sau96I	GGNCC	2 cut(s)	496, 761
ScrFI	CCNGG	2 cut(s)	406, 564
SduI	GDGCHC	1 cut(s)	1061
SfaNI	GCATC	2 cut(s)	489, 1348
SinI	GGWCC	1 cut(s)	496
SmiMI	CAYNNNNRTG	3 cut(s)	312, 333, 1262
SmlI	CTYRAG	2 cut(s)	299, 891
SmoI	CTYRAG	2 cut(s)	299, 891
SpeI	ACTAGT	1 cut(s)	1201
Sse9I	AATT	7 cut(s)	576, 756, 1120, 1304, 1390, 1400, 1407
SsiI	CCGC	1 cut(s)	204
SspI	AATATT	1 cut(s)	1234
SspMI	CTAG	2 cut(s)	263, 1202
StyD4I	CCNGG	2 cut(s)	404, 562
StyI	CCWWGG	3 cut(s)	58, 925, 1052
TaaI	ACNGT	3 cut(s)	244, 697, 827
TaiI	ACGT	1 cut(s)	541
TaqI	TCGA	1 cut(s)	552
TasI	AATT	7 cut(s)	576, 756, 1120, 1304, 1390, 1400, 1407
TatI	WGTACW	2 cut(s)	429, 827
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	2 cut(s)	639, 710
Tru1I	TTAA	6 cut(s)	666, 690, 1029, 1068, 1103, 1370
Tru9I	TTAA	6 cut(s)	666, 690, 1029, 1068, 1103, 1370
TscAI	CASTG	2 cut(s)	249, 702
TseFI	GTSAC	1 cut(s)	597
TseI	GCWGC	2 cut(s)	206, 742
Tsp45I	GTSAC	1 cut(s)	597
TspDTI	ATGAA	8 cut(s)	107, 351, 518, 675, 864, 943, 1002, 1393
TspRI	CASTG	2 cut(s)	249, 702
VpaK11BI	GGWCC	1 cut(s)	496
VspI	ATTAAT	1 cut(s)	690
XagI	CCTNNNNNAGG	1 cut(s)	57
XapI	RAATTY	2 cut(s)	1120, 1390
XceI	RCATGY	1 cut(s)	317
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1261, 1295
XmiI	GTMKAC	1 cut(s)	318
XmnI	GAANNNNTTC	1 cut(s)	1391
XspI	CTAG	2 cut(s)	263, 1202
Zsp2I	ATGCAT	1 cut(s)	1363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.