60s ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g17061 |
| malus_domestica | MD02G1071700.v1.1 MD08G1183300.v1.1 MD10G1116300.v1.1 |
| pyrus_communis | pycom02g05550 pycom02g25640 |
| rosa_chinensis | RchiOBHm_Chr3g0463691 RchiOBHm_Chr3g0488461 RchiOBHm_Chr4g0387091 RchiOBHm_Chr4g0393421 RchiOBHm_Chr5g0070501 RchiOBHm_Chr7g0200661 |
| rosa_multiflora | Rmu_co8395177.1_g000001 Rmu_sc0000276.1_g000009 Rmu_sc0000577.1_g000015 Rmu_sc0004908.1_g000012 Rmu_sc0008393.1_g000001 Rmu_sc0009422.1_g000003 Rmu_sc0013203.1_g000003 Rmu_sc0018791.1_g000001 Rmu_sc0040893.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00141110 Rroxscaffold_5G00365540 Rroxscaffold_6G00404100 Rroxscaffold_7G00190480 Rroxscaffold_7G00197650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 71 |
| AcsI | RAATTY | 1 cut(s) | 59 |
| AgsI | TTSAA | 2 cut(s) | 154, 178 |
| AjnI | CCWGG | 1 cut(s) | 118 |
| AluBI | AGCT | 1 cut(s) | 184 |
| AluI | AGCT | 1 cut(s) | 184 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 125 |
| ApeKI | GCWGC | 1 cut(s) | 181 |
| ApoI | RAATTY | 1 cut(s) | 59 |
| AspLEI | GCGC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 1 cut(s) | 205 |
| AvaII | GGWCC | 1 cut(s) | 205 |
| BbsI | GAAGAC | 2 cut(s) | 90, 105 |
| BbvI | GCAGC | 1 cut(s) | 193 |
| BciT130I | CCWGG | 1 cut(s) | 120 |
| BclI | TGATCA | 1 cut(s) | 132 |
| BfaI | CTAG | 1 cut(s) | 209 |
| BisI | GCNGC | 1 cut(s) | 182 |
| BlsI | GCNGC | 1 cut(s) | 183 |
| Bme1390I | CCNGG | 1 cut(s) | 120 |
| Bme18I | GGWCC | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 1 cut(s) | 205 |
| BmrFI | CCNGG | 1 cut(s) | 120 |
| BpiI | GAAGAC | 2 cut(s) | 90, 105 |
| BsaAI | YACGTR | 1 cut(s) | 31 |
| BsaJI | CCNNGG | 1 cut(s) | 118 |
| Bse3DI | GCAATG | 1 cut(s) | 216 |
| BseBI | CCWGG | 1 cut(s) | 120 |
| BseDI | CCNNGG | 1 cut(s) | 118 |
| BseMI | GCAATG | 1 cut(s) | 216 |
| BseXI | GCAGC | 1 cut(s) | 193 |
| Bsp143I | GATC | 2 cut(s) | 76, 132 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BsrDI | GCAATG | 1 cut(s) | 216 |
| BssECI | CCNNGG | 1 cut(s) | 118 |
| BssMI | GATC | 2 cut(s) | 76, 132 |
| Bst2UI | CCWGG | 1 cut(s) | 120 |
| Bst4CI | ACNGT | 1 cut(s) | 127 |
| BstBAI | YACGTR | 1 cut(s) | 31 |
| BstC8I | GCNNGC | 2 cut(s) | 109, 197 |
| BstHHI | GCGC | 1 cut(s) | 159 |
| BstKTI | GATC | 2 cut(s) | 79, 135 |
| BstMBI | GATC | 2 cut(s) | 76, 132 |
| BstNI | CCWGG | 1 cut(s) | 120 |
| BstSCI | CCNGG | 1 cut(s) | 118 |
| BstV1I | GCAGC | 1 cut(s) | 193 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 105 |
| Cac8I | GCNNGC | 2 cut(s) | 109, 197 |
| CaiI | CAGNNNCTG | 1 cut(s) | 125 |
| CfoI | GCGC | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 205 |
| CviJI | RGCY | 3 cut(s) | 143, 184, 195 |
| CviKI_1 | RGCY | 3 cut(s) | 143, 184, 195 |
| DpnI | GATC | 2 cut(s) | 78, 134 |
| DpnII | GATC | 2 cut(s) | 76, 132 |
| Eco47I | GGWCC | 1 cut(s) | 205 |
| EcoRI | GAATTC | 1 cut(s) | 59 |
| EcoRII | CCWGG | 1 cut(s) | 118 |
| FaiI | YATR | 1 cut(s) | 96 |
| FbaI | TGATCA | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 1 cut(s) | 182 |
| FspBI | CTAG | 1 cut(s) | 209 |
| GlaI | GCGC | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 182 |
| HhaI | GCGC | 1 cut(s) | 159 |
| Hin6I | GCGC | 1 cut(s) | 157 |
| HinP1I | GCGC | 1 cut(s) | 157 |
| HinfI | GANTC | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 3 cut(s) | 80, 175, 228 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 127 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpyCH4V | TGCA | 1 cut(s) | 216 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| HspAI | GCGC | 1 cut(s) | 157 |
| Ksp22I | TGATCA | 1 cut(s) | 132 |
| Kzo9I | GATC | 2 cut(s) | 76, 132 |
| LpnPI | CCDG | 6 cut(s) | 105, 125, 129, 132, 148, 177 |
| Lsp1109I | GCAGC | 1 cut(s) | 193 |
| MaeI | CTAG | 1 cut(s) | 209 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MalI | GATC | 2 cut(s) | 78, 134 |
| MboI | GATC | 2 cut(s) | 76, 132 |
| MboII | GAAGA | 6 cut(s) | 26, 29, 50, 53, 95, 110 |
| MluCI | AATT | 1 cut(s) | 59 |
| MnlI | CCTC | 5 cut(s) | 40, 49, 58, 97, 199 |
| MspR9I | CCNGG | 1 cut(s) | 120 |
| MvaI | CCWGG | 1 cut(s) | 120 |
| NdeII | GATC | 2 cut(s) | 76, 132 |
| PfeI | GAWTC | 1 cut(s) | 50 |
| PkrI | GCNGC | 1 cut(s) | 183 |
| Ppu21I | YACGTR | 1 cut(s) | 31 |
| Psp6I | CCWGG | 1 cut(s) | 118 |
| PspGI | CCWGG | 1 cut(s) | 118 |
| PspPI | GGNCC | 1 cut(s) | 205 |
| PstNI | CAGNNNCTG | 1 cut(s) | 125 |
| SatI | GCNGC | 1 cut(s) | 182 |
| Sau3AI | GATC | 2 cut(s) | 76, 132 |
| Sau96I | GGNCC | 1 cut(s) | 205 |
| ScrFI | CCNGG | 1 cut(s) | 120 |
| SetI | ASST | 3 cut(s) | 33, 152, 186 |
| SinI | GGWCC | 1 cut(s) | 205 |
| Sse9I | AATT | 1 cut(s) | 59 |
| SspMI | CTAG | 1 cut(s) | 209 |
| StyD4I | CCNGG | 1 cut(s) | 118 |
| TaaI | ACNGT | 1 cut(s) | 127 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TaqI | TCGA | 1 cut(s) | 63 |
| TasI | AATT | 1 cut(s) | 59 |
| TfiI | GAWTC | 1 cut(s) | 50 |
| TseI | GCWGC | 1 cut(s) | 181 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| VpaK11BI | GGWCC | 1 cut(s) | 205 |
| XapI | RAATTY | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 209 |