Rmu_sc0000577.1_g000015

A reductase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000577.1
Physical Location & Seq
Reverse (-)
49520 .. 51006
1487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000577.1_g000015.1.cds

Sequence Viewer

Length: 1410 bp
atggcataccatggctacgatcccggggatcgtaacaactggtatcagagcccgcacctgggcctgtctccggtgtgtccggcggtgtacagcagtgggatctacggcggttgttacaacacgcatacttctcacccttactgtagccctagctacccaccacctccttcccaattcccattgcaaccaagctaccctccaccaccaccaccttcccaaaccatcatcaatggccgcttactccctcatcaatttccatcaacccacacttaccattcacctcgttttgacccaattccctggatatacccatcgatttcacaacgccattcctatgacccatcagttaccagtgttcattctcagttcatcttcaccaaaaccaggaatccaccacctatttaccattctgctccttcatttccaacctttcagtcacccttaactccacttttgtgccccaactccaatttactgatctcaaacctcattctctccatagcaaaccgttttggggtttcaatcgtagagtcgccatgggtgcaaaagctagagttgccaaaaagacttgaaacccagatctgctccgtgatgtgggtaagtactcgaggtctaagagttgagattatgaaggagattcttcagcaaattgtgggtctaaaacctccattcgatatatcaaaatcgacggcggtgcaattcagaagtctgccgtctttcggaaacacctcgtcgtcttcagtttcagcaacggatgatacataccactctactcccacacaagccccaattacttcacctaaagttgcacatcaagtgtttgatgaaaagccggcgatggagaccctagcaccaactacagaagatgaggagattatcaaggttgtggttgccggaaccattccttcatactcagtccagtcaaagctcggcgattgcaagagggctgcttctattaggtgcaagtccttagagggatttgattacgggtcaaatttgggtcaatgctgtgaaatgccagttgggtctgtcaccgttcctgttgggattgttgggcctatcatttttgatggaagagagttgtcaggccctatggccaccactgaaggttgccatatggaggacctcgctaagagagcagctgagttcaagttcttcatgaaagaccctgacaattatgaaaccagtttccatctcgaaaaggcaaaaaaggggccaaaaacacatgaaattgggcaccaagcatccattatgtcggttagtggcattgagaatgccaaagaagaggaccctacatctattcttggagttaagaattcatcaaagattccctccctagccattgacgcagacaaagaagcctgtaaccatcatcccttgagaaaagttgtgatgacagtggaggattga

Protein Analysis

469

Amino Acids

51.58

Weight (kDa)

6.52

Isoelectric Point (pI)

52.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1236
AciI CCGC 5 cut(s) 53, 83, 108, 235, 692
AclWI GGATC 3 cut(s) 14, 36, 107
AcoI YGGCCR 2 cut(s) 232, 1095
AcsI RAATTY 2 cut(s) 994, 1315
AcuI CTGAAG 3 cut(s) 626, 723, 1125
AfaI GTAC 2 cut(s) 89, 604
AfiI CCNNNNNNNGG 8 cut(s) 58, 59, 70, 384, 514, 594, 719, 1120
AgsI TTSAA 3 cut(s) 522, 572, 1150
AjnI CCWGG 3 cut(s) 57, 299, 383
AjuI GAANNNNNNNTTGG 2 cut(s) 1005, 1037
AleI CACNNNNGTG 1 cut(s) 454
AluBI AGCT 5 cut(s) 153, 192, 550, 928, 1142
AluI AGCT 5 cut(s) 153, 192, 550, 928, 1142
Alw26I GTCTC 2 cut(s) 72, 836
AlwI GGATC 3 cut(s) 14, 36, 107
Ama87I CYCGRG 2 cut(s) 23, 606
AoxI GGCC 6 cut(s) 61, 232, 1055, 1087, 1095, 1214
ApeKI GCWGC 2 cut(s) 947, 1139
ApoI RAATTY 2 cut(s) 994, 1315
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
AspS9I GGNCC 6 cut(s) 61, 1055, 1088, 1123, 1214, 1288
AsuC2I CCSGG 2 cut(s) 24, 25
AsuHPI GGTGA 6 cut(s) 125, 270, 367, 429, 789, 1024
AvaI CYCGRG 2 cut(s) 23, 606
AvaII GGWCC 2 cut(s) 1123, 1288
BaeGI GKGCMC 2 cut(s) 461, 1239
BalI TGGCCA 1 cut(s) 1097
BanI GGYRCC 1 cut(s) 1236
BanII GRGCYC 1 cut(s) 53
BbsI GAAGAC 1 cut(s) 729
BbvI GCAGC 2 cut(s) 934, 1151
BccI CCATC 8 cut(s) 230, 265, 319, 349, 832, 1064, 1200, 1377
BceAI ACGGC 3 cut(s) 121, 697, 705
BcgI CGANNNNNNTGC 2 cut(s) 676, 710
BciT130I CCWGG 3 cut(s) 59, 301, 385
BcnI CCSGG 2 cut(s) 24, 25
BcoDI GTCTC 2 cut(s) 72, 836
BfaI CTAG 4 cut(s) 150, 551, 848, 1337
BfmI CTRYAG 2 cut(s) 142, 858
BglII AGATCT 1 cut(s) 579
BisI GCNGC 3 cut(s) 235, 948, 1140
BlsI GCNGC 3 cut(s) 236, 949, 1141
BmcAI AGTACT 1 cut(s) 604
Bme1390I CCNGG 5 cut(s) 24, 25, 59, 301, 385
Bme18I GGWCC 2 cut(s) 1123, 1288
BmeT110I CYCGRG 2 cut(s) 23, 606
BmgT120I GGNCC 6 cut(s) 61, 1055, 1088, 1123, 1214, 1288
BmiI GGNNCC 4 cut(s) 898, 1215, 1238, 1290
BmrFI CCNGG 5 cut(s) 24, 25, 59, 301, 385
BmsI GCATC 1 cut(s) 1253
BpiI GAAGAC 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 1399
BpuMI CCSGG 2 cut(s) 24, 25
Bsa29I ATCGAT 1 cut(s) 314
BsaI GGTCTC 1 cut(s) 836
BsaJI CCNNGG 6 cut(s) 10, 23, 24, 58, 299, 536
BsaWI WCCGGW 1 cut(s) 70
Bsc4I CCNNNNNNNGG 8 cut(s) 58, 59, 70, 384, 514, 594, 719, 1120
Bse118I RCCGGY 1 cut(s) 832
Bse1I ACTGG 5 cut(s) 44, 351, 919, 1019, 1185
Bse3DI GCAATG 1 cut(s) 179
BseBI CCWGG 3 cut(s) 59, 301, 385
BseCI ATCGAT 1 cut(s) 314
BseDI CCNNGG 6 cut(s) 10, 23, 24, 58, 299, 536
BseGI GGATG 3 cut(s) 760, 1244, 1372
BseLI CCNNNNNNNGG 8 cut(s) 58, 59, 70, 384, 514, 594, 719, 1120
BseMI GCAATG 1 cut(s) 179
BseMII CTCAG 3 cut(s) 377, 927, 1134
BseNI ACTGG 5 cut(s) 44, 351, 919, 1019, 1185
BseRI GAGGAG 1 cut(s) 884
BseSI GKGCMC 2 cut(s) 461, 1239
BseXI GCAGC 2 cut(s) 934, 1151
BshFI GGCC 6 cut(s) 63, 234, 1057, 1089, 1097, 1216
BshNI GGYRCC 1 cut(s) 1236
BshVI ATCGAT 1 cut(s) 314
BsiHKCI CYCGRG 2 cut(s) 23, 606
BsiSI CCGG 5 cut(s) 24, 71, 80, 833, 894
BslI CCNNNNNNNGG 8 cut(s) 58, 59, 70, 384, 514, 594, 719, 1120
BsmAI GTCTC 2 cut(s) 72, 836
BsmI GAATGC 1 cut(s) 1279
BsnI GGCC 6 cut(s) 63, 234, 1057, 1089, 1097, 1216
Bso31I GGTCTC 1 cut(s) 836
BsoBI CYCGRG 2 cut(s) 23, 606
Bsp1286I GDGCHC 3 cut(s) 53, 461, 1239
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 5 cut(s) 19, 28, 99, 477, 579
Bsp19I CCATGG 2 cut(s) 10, 536
BspACI CCGC 5 cut(s) 53, 83, 108, 235, 692
BspANI GGCC 6 cut(s) 63, 234, 1057, 1089, 1097, 1216
BspCNI CTCAG 3 cut(s) 376, 926, 1135
BspDI ATCGAT 1 cut(s) 314
BspHI TCATGA 1 cut(s) 1158
BspLI GGNNCC 4 cut(s) 898, 1215, 1238, 1290
BspPI GGATC 3 cut(s) 14, 36, 107
BspT107I GGYRCC 1 cut(s) 1236
BspTNI GGTCTC 1 cut(s) 836
BsrDI GCAATG 1 cut(s) 179
BsrFI RCCGGY 1 cut(s) 832
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 5 cut(s) 44, 351, 919, 1019, 1185
BssAI RCCGGY 1 cut(s) 832
BssECI CCNNGG 6 cut(s) 10, 23, 24, 58, 299, 536
BssMI GATC 5 cut(s) 19, 28, 99, 477, 579
BssT1I CCWWGG 2 cut(s) 10, 536
Bst2UI CCWGG 3 cut(s) 59, 301, 385
Bst4CI ACNGT 4 cut(s) 143, 509, 1036, 1399
Bst6I CTCTTC 2 cut(s) 1069, 1278
BstAUI TGTACA 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 53, 834
BstDEI CTNAG 6 cut(s) 363, 614, 913, 970, 1131, 1143
BstDSI CCRYGG 2 cut(s) 10, 536
BstF5I GGATG 3 cut(s) 760, 1244, 1372
BstKTI GATC 5 cut(s) 22, 31, 102, 480, 582
BstMAI GTCTC 2 cut(s) 72, 836
BstMBI GATC 5 cut(s) 19, 28, 99, 477, 579
BstMWI GCNNNNNNNGC 4 cut(s) 541, 556, 1136, 1346
BstNI CCWGG 3 cut(s) 59, 301, 385
BstSCI CCNGG 5 cut(s) 22, 23, 57, 299, 383
BstSFI CTRYAG 2 cut(s) 142, 858
BstSLI GKGCMC 2 cut(s) 461, 1239
BstV1I GCAGC 2 cut(s) 934, 1151
BstV2I GAAGAC 1 cut(s) 729
BstX2I RGATCY 2 cut(s) 99, 579
BstXI CCANNNNNNTGG 1 cut(s) 300
BstYI RGATCY 2 cut(s) 99, 579
Bsu15I ATCGAT 1 cut(s) 314
BsuRI GGCC 6 cut(s) 63, 234, 1057, 1089, 1097, 1216
BsuTUI ATCGAT 1 cut(s) 314
BtgI CCRYGG 2 cut(s) 10, 536
BtgZI GCGATG 1 cut(s) 851
BtsCI GGATG 3 cut(s) 760, 1244, 1372
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 4 cut(s) 100, 358, 1101, 1404
Cac8I GCNNGC 2 cut(s) 53, 834
CciI TCATGA 1 cut(s) 1158
Cfr10I RCCGGY 1 cut(s) 832
Cfr13I GGNCC 6 cut(s) 61, 1055, 1088, 1123, 1214, 1288
Cfr9I CCCGGG 1 cut(s) 23
ClaI ATCGAT 1 cut(s) 314
CseI GACGC 1 cut(s) 1355
Csp6I GTAC 2 cut(s) 88, 603
CviAII CATG 4 cut(s) 11, 537, 1159, 1226
CviQI GTAC 2 cut(s) 88, 603
DdeI CTNAG 6 cut(s) 363, 614, 913, 970, 1131, 1143
DpnI GATC 5 cut(s) 21, 30, 101, 479, 581
DpnII GATC 5 cut(s) 19, 28, 99, 477, 579
EaeI YGGCCR 2 cut(s) 232, 1095
Eam1104I CTCTTC 2 cut(s) 1069, 1278
EarI CTCTTC 2 cut(s) 1069, 1278
Eco130I CCWWGG 2 cut(s) 10, 536
Eco24I GRGCYC 1 cut(s) 53
Eco31I GGTCTC 1 cut(s) 836
Eco47I GGWCC 2 cut(s) 1123, 1288
Eco57I CTGAAG 3 cut(s) 626, 723, 1125
Eco88I CYCGRG 2 cut(s) 23, 606
EcoO109I RGGNCCY 3 cut(s) 1088, 1123, 1288
EcoRI GAATTC 1 cut(s) 1315
EcoRII CCWGG 3 cut(s) 57, 299, 383
EcoT14I CCWWGG 2 cut(s) 10, 536
EcoT38I GRGCYC 1 cut(s) 53
ErhI CCWWGG 2 cut(s) 10, 536
FaeI CATG 4 cut(s) 14, 540, 1162, 1229
FatI CATG 4 cut(s) 10, 536, 1158, 1225
FauI CCCGC 1 cut(s) 60
FauNDI CATATG 1 cut(s) 1116
Fnu4HI GCNGC 3 cut(s) 235, 948, 1140
FokI GGATG 3 cut(s) 767, 1231, 1359
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 3 cut(s) 235, 948, 1140
FspBI CTAG 4 cut(s) 150, 551, 848, 1337
GluI GCNGC 3 cut(s) 235, 948, 1140
HaeIII GGCC 6 cut(s) 63, 234, 1057, 1089, 1097, 1216
HapII CCGG 5 cut(s) 24, 71, 80, 833, 894
HgaI GACGC 1 cut(s) 1355
Hin1II CATG 4 cut(s) 14, 540, 1162, 1229
HinfI GANTC 4 cut(s) 388, 530, 637, 1327
HpaII CCGG 5 cut(s) 24, 71, 80, 833, 894
HphI GGTGA 6 cut(s) 125, 270, 367, 429, 789, 1024
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 3 cut(s) 48, 704, 722
Hpy188III TCNNGA 2 cut(s) 1159, 1196
Hpy8I GTNNAC 1 cut(s) 88
Hpy99I CGWCG 2 cut(s) 691, 736
HpyAV CCTTC 6 cut(s) 177, 222, 426, 625, 915, 1100
HpyCH4III ACNGT 4 cut(s) 143, 509, 1036, 1399
HpyCH4V TGCA 6 cut(s) 184, 544, 697, 809, 939, 963
HpyF10VI GCNNNNNNNGC 4 cut(s) 541, 556, 1136, 1346
HpyF3I CTNAG 6 cut(s) 363, 614, 913, 970, 1131, 1143
Hsp92II CATG 4 cut(s) 14, 540, 1162, 1229
KroI GCCGGC 1 cut(s) 832
KroNI GCCGGC 1 cut(s) 834
Kzo9I GATC 5 cut(s) 19, 28, 99, 477, 579
LmnI GCTCC 2 cut(s) 418, 590
Lsp1109I GCAGC 2 cut(s) 934, 1151
LweI GCATC 1 cut(s) 1253
MaeI CTAG 4 cut(s) 150, 551, 848, 1337
MaeIII GTNAC 6 cut(s) 32, 113, 346, 435, 1030, 1364
MalI GATC 5 cut(s) 21, 30, 101, 479, 581
MboI GATC 5 cut(s) 19, 28, 99, 477, 579
MboII GAAGA 7 cut(s) 364, 632, 729, 875, 1086, 1147, 1295
MflI RGATCY 2 cut(s) 99, 579
MhlI GDGCHC 3 cut(s) 53, 461, 1239
MlsI TGGCCA 1 cut(s) 1097
MluNI TGGCCA 1 cut(s) 1097
MlyI GAGTC 1 cut(s) 539
MmeI TCCRAC 1 cut(s) 449
Mox20I TGGCCA 1 cut(s) 1097
MroNI GCCGGC 1 cut(s) 832
MscI TGGCCA 1 cut(s) 1097
MseI TTAA 2 cut(s) 443, 1311
MslI CAYNNNNRTG 2 cut(s) 333, 454
Msp20I TGGCCA 1 cut(s) 1097
MspA1I CMGCKG 1 cut(s) 1142
MspI CCGG 5 cut(s) 24, 71, 80, 833, 894
MspR9I CCNGG 5 cut(s) 24, 25, 59, 301, 385
Mva1269I GAATGC 1 cut(s) 1279
MvaI CCWGG 3 cut(s) 59, 301, 385
MwoI GCNNNNNNNGC 4 cut(s) 541, 556, 1136, 1346
NaeI GCCGGC 1 cut(s) 834
NciI CCSGG 2 cut(s) 24, 25
NcoI CCATGG 2 cut(s) 10, 536
NdeI CATATG 1 cut(s) 1116
NdeII GATC 5 cut(s) 19, 28, 99, 477, 579
NgoMIV GCCGGC 1 cut(s) 832
NlaIII CATG 4 cut(s) 14, 540, 1162, 1229
NlaIV GGNNCC 4 cut(s) 898, 1215, 1238, 1290
NmeAIII GCCGAG 1 cut(s) 909
NmuCI GTSAC 2 cut(s) 435, 1030
OliI CACNNNNGTG 1 cut(s) 454
PaeR7I CTCGAG 1 cut(s) 606
PagI TCATGA 1 cut(s) 1158
PctI GAATGC 1 cut(s) 1279
PdiI GCCGGC 1 cut(s) 834
PfeI GAWTC 3 cut(s) 388, 637, 1327
PkrI GCNGC 3 cut(s) 236, 949, 1141
PleI GAGTC 1 cut(s) 538
PpsI GAGTC 1 cut(s) 538
PpuMI RGGWCCY 2 cut(s) 1123, 1288
Psp5II RGGWCCY 2 cut(s) 1123, 1288
Psp6I CCWGG 3 cut(s) 57, 299, 383
PspGI CCWGG 3 cut(s) 57, 299, 383
PspN4I GGNNCC 4 cut(s) 898, 1215, 1238, 1290
PspPI GGNCC 6 cut(s) 61, 1055, 1088, 1123, 1214, 1288
PspPPI RGGWCCY 2 cut(s) 1123, 1288
PspXI VCTCGAGB 1 cut(s) 606
PsuI RGATCY 2 cut(s) 99, 579
PvuII CAGCTG 1 cut(s) 1142
RsaI GTAC 2 cut(s) 89, 604
RsaNI GTAC 2 cut(s) 88, 603
RseI CAYNNNNRTG 2 cut(s) 333, 454
SaqAI TTAA 2 cut(s) 443, 1311
SatI GCNGC 3 cut(s) 235, 948, 1140
Sau3AI GATC 5 cut(s) 19, 28, 99, 477, 579
Sau96I GGNCC 6 cut(s) 61, 1055, 1088, 1123, 1214, 1288
ScaI AGTACT 1 cut(s) 604
SchI GAGTC 1 cut(s) 539
ScrFI CCNGG 5 cut(s) 24, 25, 59, 301, 385
SduI GDGCHC 3 cut(s) 53, 461, 1239
SfaNI GCATC 1 cut(s) 1253
SfcI CTRYAG 2 cut(s) 142, 858
Sfr274I CTCGAG 1 cut(s) 606
SinI GGWCC 2 cut(s) 1123, 1288
SlaI CTCGAG 1 cut(s) 606
SmaI CCCGGG 1 cut(s) 25
SmiMI CAYNNNNRTG 2 cut(s) 333, 454
SmlI CTYRAG 2 cut(s) 606, 1378
SmoI CTYRAG 2 cut(s) 606, 1378
SsiI CCGC 5 cut(s) 53, 83, 108, 235, 692
SspMI CTAG 4 cut(s) 150, 551, 848, 1337
StyD4I CCNGG 5 cut(s) 22, 23, 57, 299, 383
StyI CCWWGG 2 cut(s) 10, 536
TaaI ACNGT 4 cut(s) 143, 509, 1036, 1399
TaqI TCGA 5 cut(s) 314, 607, 672, 686, 1197
TatI WGTACW 2 cut(s) 87, 602
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 3 cut(s) 388, 637, 1327
Tru1I TTAA 2 cut(s) 443, 1311
Tru9I TTAA 2 cut(s) 443, 1311
TscAI CASTG 4 cut(s) 100, 358, 1108, 1404
TseFI GTSAC 2 cut(s) 435, 1030
TseI GCWGC 2 cut(s) 947, 1139
Tsp45I GTSAC 2 cut(s) 435, 1030
TspGWI ACGGA 2 cut(s) 577, 767
TspMI CCCGGG 1 cut(s) 23
TspRI CASTG 4 cut(s) 100, 358, 1108, 1404
VpaK11BI GGWCC 2 cut(s) 1123, 1288
XapI RAATTY 2 cut(s) 994, 1315
XhoI CTCGAG 1 cut(s) 606
XmaI CCCGGG 1 cut(s) 23
XspI CTAG 4 cut(s) 150, 551, 848, 1337
ZrmI AGTACT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.