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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g26980 FvH4_6g32452 FvH4_6g32461 FvH4_6g32741 |
| prunus_persica | Prupe.3G054600_v2.0.a1 Prupe.3G054700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0395301 |
| rosa_laevigata | RLG00000020089 RLG00000020183 |
| rosa_multiflora | Rmu_sc0001483.1_g000030 Rmu_sc0002727.1_g000001 Rmu_sc0005789.1_g000002 Rmu_sc0010454.1_g000003 Rmu_sc0010817.1_g000032 Rmu_sc0035624.1_g000001 |
| rosa_roxburghii | Rroxscaffold_152G00434870 Rroxscaffold_2G00100290 Rroxscaffold_2G00103790 Rroxscaffold_2G00104560 |
| rosa_rugosa | Rorug03G0358200 |
| rosa_samantha | Rh2AG420800 Rh2AG439900 Rh2AG449200 Rh2BG425500 Rh2BG430600 Rh2BG449900 Rh2BG461600 Rh2CG407800 Rh2CG426900 Rh2CG436100 Rh2DG440500 Rh2DG459800 Rh2DG470800 Rh4AG058300 Rh4BG057100 Rh4CG062900 Rh4DG053800 Rh6CG063800 Rh6CG064600 Rh6DG060900 Rh6DG061600 |
| rosa_wichuraiana | Rw2G035990 Rw4G004690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1364, 1487 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 99 |
| AccIII | TCCGGA | 1 cut(s) | 992 |
| AciI | CCGC | 3 cut(s) | 280, 463, 1447 |
| AclWI | GGATC | 3 cut(s) | 12, 67, 1250 |
| AcoI | YGGCCR | 1 cut(s) | 1214 |
| AcsI | RAATTY | 2 cut(s) | 1176, 1525 |
| AcuI | CTGAAG | 1 cut(s) | 1457 |
| AdeI | CACNNNGTG | 1 cut(s) | 123 |
| AfaI | GTAC | 4 cut(s) | 381, 467, 621, 1320 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 99, 517, 1552 |
| AflIII | ACRYGT | 2 cut(s) | 556, 1120 |
| AjnI | CCWGG | 1 cut(s) | 92 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 955, 987 |
| Alw21I | GWGCWC | 2 cut(s) | 498, 867 |
| Alw26I | GTCTC | 3 cut(s) | 200, 884, 1421 |
| AlwI | GGATC | 3 cut(s) | 12, 67, 1250 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 99 |
| Aor13HI | TCCGGA | 1 cut(s) | 992 |
| AoxI | GGCC | 2 cut(s) | 689, 1214 |
| ApeKI | GCWGC | 1 cut(s) | 1189 |
| ApoI | RAATTY | 2 cut(s) | 1176, 1525 |
| AseI | ATTAAT | 1 cut(s) | 150 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 786 |
| AspS9I | GGNCC | 2 cut(s) | 369, 406 |
| AsuHPI | GGTGA | 3 cut(s) | 289, 434, 1107 |
| AvaII | GGWCC | 2 cut(s) | 369, 406 |
| BanII | GRGCYC | 2 cut(s) | 498, 867 |
| BbsI | GAAGAC | 3 cut(s) | 552, 816, 1202 |
| Bbv12I | GWGCWC | 2 cut(s) | 498, 867 |
| BbvI | GCAGC | 1 cut(s) | 1176 |
| BccI | CCATC | 4 cut(s) | 239, 286, 1385, 1490 |
| BceAI | ACGGC | 2 cut(s) | 1229, 1303 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 181, 215, 1116, 1150 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BciVI | GTATCC | 1 cut(s) | 421 |
| BcoDI | GTCTC | 3 cut(s) | 200, 884, 1421 |
| BfaI | CTAG | 3 cut(s) | 485, 504, 1031 |
| BfmI | CTRYAG | 1 cut(s) | 1260 |
| BfuI | GTATCC | 1 cut(s) | 421 |
| BisI | GCNGC | 2 cut(s) | 1190, 1448 |
| BlsI | GCNGC | 2 cut(s) | 1191, 1449 |
| Bme1390I | CCNGG | 1 cut(s) | 94 |
| Bme18I | GGWCC | 2 cut(s) | 369, 406 |
| BmgT120I | GGNCC | 2 cut(s) | 369, 406 |
| BmiI | GGNNCC | 5 cut(s) | 27, 370, 408, 1248, 1557 |
| BmrFI | CCNGG | 1 cut(s) | 94 |
| BmrI | ACTGGG | 1 cut(s) | 129 |
| BmsI | GCATC | 7 cut(s) | 58, 497, 627, 925, 946, 1258, 1555 |
| BmuI | ACTGGG | 1 cut(s) | 129 |
| BpiI | GAAGAC | 3 cut(s) | 552, 816, 1202 |
| BpmI | CTGGAG | 2 cut(s) | 539, 942 |
| BpuEI | CTTGAG | 2 cut(s) | 17, 776 |
| BsaAI | YACGTR | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 3 cut(s) | 372, 1211, 1533 |
| BsaWI | WCCGGW | 1 cut(s) | 992 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 234, 264 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 99, 517, 1552 |
| Bse1I | ACTGG | 4 cut(s) | 104, 124, 137, 1236 |
| Bse3DI | GCAATG | 1 cut(s) | 945 |
| BseAI | TCCGGA | 1 cut(s) | 992 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 3 cut(s) | 372, 1211, 1533 |
| BseGI | GGATG | 2 cut(s) | 1060, 1396 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 99, 517, 1552 |
| BseMI | GCAATG | 1 cut(s) | 945 |
| BseMII | CTCAG | 1 cut(s) | 374 |
| BseNI | ACTGG | 4 cut(s) | 104, 124, 137, 1236 |
| BseRI | GAGGAG | 3 cut(s) | 188, 269, 1146 |
| BseXI | GCAGC | 1 cut(s) | 1176 |
| BseYI | CCCAGC | 1 cut(s) | 409 |
| BsgI | GTGCAG | 1 cut(s) | 1346 |
| BshFI | GGCC | 2 cut(s) | 691, 1216 |
| BsiHKAI | GWGCWC | 2 cut(s) | 498, 867 |
| BsiSI | CCGG | 2 cut(s) | 23, 993 |
| BslFI | GGGAC | 2 cut(s) | 1390, 1513 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 99, 517, 1552 |
| BsmAI | GTCTC | 3 cut(s) | 200, 884, 1421 |
| BsmFI | GGGAC | 2 cut(s) | 1390, 1513 |
| BsmI | GAATGC | 1 cut(s) | 829 |
| BsnI | GGCC | 2 cut(s) | 691, 1216 |
| Bsp1286I | GDGCHC | 2 cut(s) | 498, 867 |
| Bsp13I | TCCGGA | 1 cut(s) | 992 |
| Bsp143I | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| Bsp19I | CCATGG | 1 cut(s) | 1533 |
| BspACI | CCGC | 3 cut(s) | 280, 463, 1447 |
| BspANI | GGCC | 2 cut(s) | 691, 1216 |
| BspCNI | CTCAG | 1 cut(s) | 375 |
| BspEI | TCCGGA | 1 cut(s) | 992 |
| BspLI | GGNNCC | 5 cut(s) | 27, 370, 408, 1248, 1557 |
| BspMAI | CTGCAG | 1 cut(s) | 1264 |
| BspPI | GGATC | 3 cut(s) | 12, 67, 1250 |
| BsrDI | GCAATG | 1 cut(s) | 945 |
| BsrI | ACTGG | 4 cut(s) | 104, 124, 137, 1236 |
| BssECI | CCNNGG | 3 cut(s) | 372, 1211, 1533 |
| BssMI | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| BssT1I | CCWWGG | 2 cut(s) | 372, 1533 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 2 cut(s) | 542, 989 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1268, 1574 |
| BstBAI | YACGTR | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 2 cut(s) | 642, 1187 |
| BstDEI | CTNAG | 1 cut(s) | 383 |
| BstDSI | CCRYGG | 2 cut(s) | 1211, 1533 |
| BstEII | GGTNACC | 1 cut(s) | 295 |
| BstF5I | GGATG | 2 cut(s) | 1060, 1396 |
| BstKTI | GATC | 4 cut(s) | 7, 75, 745, 1258 |
| BstMAI | GTCTC | 3 cut(s) | 200, 884, 1421 |
| BstMBI | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 460, 1268, 1574 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstNSI | RCATGY | 3 cut(s) | 553, 560, 1124 |
| BstPI | GGTNACC | 1 cut(s) | 295 |
| BstSCI | CCNGG | 1 cut(s) | 92 |
| BstSFI | CTRYAG | 1 cut(s) | 1260 |
| BstV1I | GCAGC | 1 cut(s) | 1176 |
| BstV2I | GAAGAC | 3 cut(s) | 552, 816, 1202 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BsuI | GTATCC | 1 cut(s) | 421 |
| BsuRI | GGCC | 2 cut(s) | 691, 1216 |
| BtgI | CCRYGG | 2 cut(s) | 1211, 1533 |
| BtgZI | GCGATG | 1 cut(s) | 1578 |
| BtsCI | GGATG | 2 cut(s) | 1060, 1396 |
| BtsIMutI | CAGTG | 3 cut(s) | 97, 117, 1071 |
| Cac8I | GCNNGC | 2 cut(s) | 642, 1187 |
| CaiI | CAGNNNCTG | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 2 cut(s) | 369, 406 |
| Csp6I | GTAC | 4 cut(s) | 380, 466, 620, 1319 |
| CviAII | CATG | 8 cut(s) | 206, 550, 557, 601, 1121, 1337, 1376, 1534 |
| CviQI | GTAC | 4 cut(s) | 380, 466, 620, 1319 |
| DdeI | CTNAG | 1 cut(s) | 383 |
| DpnI | GATC | 4 cut(s) | 6, 74, 744, 1257 |
| DpnII | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| DraIII | CACNNNGTG | 1 cut(s) | 123 |
| EaeI | YGGCCR | 1 cut(s) | 1214 |
| Ecl136II | GAGCTC | 2 cut(s) | 496, 865 |
| Eco130I | CCWWGG | 2 cut(s) | 372, 1533 |
| Eco24I | GRGCYC | 2 cut(s) | 498, 867 |
| Eco47I | GGWCC | 2 cut(s) | 369, 406 |
| Eco53kI | GAGCTC | 2 cut(s) | 496, 865 |
| Eco57I | CTGAAG | 1 cut(s) | 1457 |
| Eco91I | GGTNACC | 1 cut(s) | 295 |
| EcoICRI | GAGCTC | 2 cut(s) | 496, 865 |
| EcoO109I | RGGNCCY | 1 cut(s) | 369 |
| EcoO65I | GGTNACC | 1 cut(s) | 295 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| EcoT14I | CCWWGG | 2 cut(s) | 372, 1533 |
| EcoT38I | GRGCYC | 2 cut(s) | 498, 867 |
| ErhI | CCWWGG | 2 cut(s) | 372, 1533 |
| FaeI | CATG | 8 cut(s) | 209, 553, 560, 604, 1124, 1340, 1379, 1537 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1234, 1266 |
| FaqI | GGGAC | 2 cut(s) | 1390, 1513 |
| FatI | CATG | 8 cut(s) | 205, 549, 556, 600, 1120, 1336, 1375, 1533 |
| Fnu4HI | GCNGC | 2 cut(s) | 1190, 1448 |
| FokI | GGATG | 2 cut(s) | 1067, 1403 |
| FriOI | GRGCYC | 2 cut(s) | 498, 867 |
| Fsp4HI | GCNGC | 2 cut(s) | 1190, 1448 |
| FspBI | CTAG | 3 cut(s) | 485, 504, 1031 |
| GluI | GCNGC | 2 cut(s) | 1190, 1448 |
| GsaI | CCCAGC | 1 cut(s) | 413 |
| GsuI | CTGGAG | 2 cut(s) | 539, 942 |
| HaeIII | GGCC | 2 cut(s) | 691, 1216 |
| HapII | CCGG | 2 cut(s) | 23, 993 |
| Hin1II | CATG | 8 cut(s) | 209, 553, 560, 604, 1124, 1340, 1379, 1537 |
| HincII | GTYRAC | 2 cut(s) | 277, 1307 |
| HindII | GTYRAC | 2 cut(s) | 277, 1307 |
| HinfI | GANTC | 8 cut(s) | 161, 179, 222, 249, 656, 1221, 1403, 1429 |
| HpaII | CCGG | 2 cut(s) | 23, 993 |
| HphI | GGTGA | 3 cut(s) | 289, 434, 1107 |
| Hpy166II | GTNNAC | 6 cut(s) | 186, 229, 277, 899, 1115, 1307 |
| Hpy188I | TCNGA | 8 cut(s) | 16, 216, 242, 458, 616, 934, 1138, 1476 |
| Hpy188III | TCNNGA | 9 cut(s) | 504, 634, 653, 662, 671, 820, 993, 1052, 1424 |
| Hpy8I | GTNNAC | 6 cut(s) | 186, 229, 277, 899, 1115, 1307 |
| Hpy99I | CGWCG | 2 cut(s) | 473, 760 |
| HpyAV | CCTTC | 3 cut(s) | 203, 640, 1024 |
| HpyCH4III | ACNGT | 2 cut(s) | 542, 989 |
| HpyCH4IV | ACGT | 2 cut(s) | 309, 468 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 460, 1268, 1574 |
| HpyF3I | CTNAG | 1 cut(s) | 383 |
| HpySE526I | ACGT | 2 cut(s) | 309, 468 |
| Hsp92II | CATG | 8 cut(s) | 209, 553, 560, 604, 1124, 1340, 1379, 1537 |
| Kpn2I | TCCGGA | 1 cut(s) | 992 |
| Kzo9I | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| LmnI | GCTCC | 3 cut(s) | 25, 493, 964 |
| Lsp1109I | GCAGC | 1 cut(s) | 1176 |
| LweI | GCATC | 7 cut(s) | 58, 497, 627, 925, 946, 1258, 1555 |
| MaeI | CTAG | 3 cut(s) | 485, 504, 1031 |
| MaeII | ACGT | 2 cut(s) | 309, 468 |
| MaeIII | GTNAC | 7 cut(s) | 139, 295, 310, 440, 1204, 1332, 1465 |
| MalI | GATC | 4 cut(s) | 6, 74, 744, 1257 |
| MboI | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| MboII | GAAGA | 6 cut(s) | 188, 427, 557, 716, 821, 1207 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MhlI | GDGCHC | 2 cut(s) | 498, 867 |
| MluCI | AATT | 6 cut(s) | 151, 394, 607, 908, 1176, 1525 |
| MlyI | GAGTC | 5 cut(s) | 155, 258, 1230, 1412, 1423 |
| MmeI | TCCRAC | 2 cut(s) | 714, 1116 |
| MroI | TCCGGA | 1 cut(s) | 992 |
| MroXI | GAANNNNTTC | 1 cut(s) | 786 |
| MseI | TTAA | 7 cut(s) | 150, 320, 389, 416, 911, 1385, 1457 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1341, 1582 |
| MspA1I | CMGCKG | 1 cut(s) | 282 |
| MspI | CCGG | 2 cut(s) | 23, 993 |
| MspR9I | CCNGG | 1 cut(s) | 94 |
| Mva1269I | GAATGC | 1 cut(s) | 829 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 460, 1268, 1574 |
| NcoI | CCATGG | 1 cut(s) | 1533 |
| NdeII | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| NlaIII | CATG | 8 cut(s) | 209, 553, 560, 604, 1124, 1340, 1379, 1537 |
| NlaIV | GGNNCC | 5 cut(s) | 27, 370, 408, 1248, 1557 |
| NmuCI | GTSAC | 4 cut(s) | 295, 310, 440, 1332 |
| NspI | RCATGY | 3 cut(s) | 553, 560, 1124 |
| PciI | ACATGT | 2 cut(s) | 556, 1120 |
| PctI | GAATGC | 1 cut(s) | 829 |
| PdmI | GAANNNNTTC | 1 cut(s) | 786 |
| PfeI | GAWTC | 3 cut(s) | 179, 222, 656 |
| PflFI | GACNNNGTC | 1 cut(s) | 815 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 99 |
| PkrI | GCNGC | 2 cut(s) | 1191, 1449 |
| PleI | GAGTC | 5 cut(s) | 155, 257, 1229, 1411, 1423 |
| PpsI | GAGTC | 5 cut(s) | 155, 257, 1229, 1411, 1423 |
| Ppu21I | YACGTR | 1 cut(s) | 310 |
| PpuMI | RGGWCCY | 1 cut(s) | 369 |
| PscI | ACATGT | 2 cut(s) | 556, 1120 |
| PshBI | ATTAAT | 1 cut(s) | 150 |
| PsiI | TTATAA | 2 cut(s) | 1364, 1487 |
| Psp124BI | GAGCTC | 2 cut(s) | 498, 867 |
| Psp5II | RGGWCCY | 1 cut(s) | 369 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspEI | GGTNACC | 1 cut(s) | 295 |
| PspFI | CCCAGC | 1 cut(s) | 409 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 5 cut(s) | 27, 370, 408, 1248, 1557 |
| PspPI | GGNCC | 2 cut(s) | 369, 406 |
| PspPPI | RGGWCCY | 1 cut(s) | 369 |
| PstI | CTGCAG | 1 cut(s) | 1264 |
| PstNI | CAGNNNCTG | 1 cut(s) | 99 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| PsyI | GACNNNGTC | 1 cut(s) | 815 |
| RsaI | GTAC | 4 cut(s) | 381, 467, 621, 1320 |
| RsaNI | GTAC | 4 cut(s) | 380, 466, 620, 1319 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1341, 1582 |
| SacI | GAGCTC | 2 cut(s) | 498, 867 |
| SaqAI | TTAA | 7 cut(s) | 150, 320, 389, 416, 911, 1385, 1457 |
| SatI | GCNGC | 2 cut(s) | 1190, 1448 |
| Sau3AI | GATC | 4 cut(s) | 4, 72, 742, 1255 |
| Sau96I | GGNCC | 2 cut(s) | 369, 406 |
| SchI | GAGTC | 5 cut(s) | 155, 258, 1230, 1412, 1423 |
| ScrFI | CCNGG | 1 cut(s) | 94 |
| SduI | GDGCHC | 2 cut(s) | 498, 867 |
| SfaNI | GCATC | 7 cut(s) | 58, 497, 627, 925, 946, 1258, 1555 |
| SfcI | CTRYAG | 1 cut(s) | 1260 |
| SinI | GGWCC | 2 cut(s) | 369, 406 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1341, 1582 |
| SmlI | CTYRAG | 2 cut(s) | 32, 791 |
| SmoI | CTYRAG | 2 cut(s) | 32, 791 |
| Sse9I | AATT | 6 cut(s) | 151, 394, 607, 908, 1176, 1525 |
| SsiI | CCGC | 3 cut(s) | 280, 463, 1447 |
| SspI | AATATT | 1 cut(s) | 305 |
| SspMI | CTAG | 3 cut(s) | 485, 504, 1031 |
| SstI | GAGCTC | 2 cut(s) | 498, 867 |
| StyD4I | CCNGG | 1 cut(s) | 92 |
| StyI | CCWWGG | 2 cut(s) | 372, 1533 |
| TaaI | ACNGT | 2 cut(s) | 542, 989 |
| TaiI | ACGT | 2 cut(s) | 312, 471 |
| TaqI | TCGA | 6 cut(s) | 201, 252, 327, 471, 777, 1007 |
| TasI | AATT | 6 cut(s) | 151, 394, 607, 908, 1176, 1525 |
| TatI | WGTACW | 1 cut(s) | 379 |
| TauI | GCSGC | 1 cut(s) | 1450 |
| TfiI | GAWTC | 3 cut(s) | 179, 222, 656 |
| Tru1I | TTAA | 7 cut(s) | 150, 320, 389, 416, 911, 1385, 1457 |
| Tru9I | TTAA | 7 cut(s) | 150, 320, 389, 416, 911, 1385, 1457 |
| TscAI | CASTG | 3 cut(s) | 104, 124, 1078 |
| TseFI | GTSAC | 4 cut(s) | 295, 310, 440, 1332 |
| TseI | GCWGC | 1 cut(s) | 1189 |
| Tsp45I | GTSAC | 4 cut(s) | 295, 310, 440, 1332 |
| TspDTI | ATGAA | 6 cut(s) | 222, 956, 1071, 1365, 1392, 1536 |
| TspGWI | ACGGA | 2 cut(s) | 65, 1517 |
| TspRI | CASTG | 3 cut(s) | 104, 124, 1078 |
| Tth111I | GACNNNGTC | 1 cut(s) | 815 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 99 |
| VpaK11BI | GGWCC | 2 cut(s) | 369, 406 |
| VspI | ATTAAT | 1 cut(s) | 150 |
| XapI | RAATTY | 2 cut(s) | 1176, 1525 |
| XbaI | TCTAGA | 1 cut(s) | 503 |
| XceI | RCATGY | 3 cut(s) | 553, 560, 1124 |
| XmnI | GAANNNNTTC | 1 cut(s) | 786 |
| XspI | CTAG | 3 cut(s) | 485, 504, 1031 |