Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Forward (+)

33226181 .. 33231006

Gene Structure 4826 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g42730.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGCCGACGTCCTCAGCCCCGACCCAACCGCCACCCAGAAGCAGCGCCTCCCCATGGCCGCCCGCCTCCAGTCTCCGACCAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCTCGAGCGTGCCCAGGCACGCGCGGCACGCGCCGCCGCGATTCGGAGAAAGTCCGTCGCCCTCAACCGTCAGCCACATCTTGATGGTTCCGATTCCGATCCCGGCCTCGATAAGCAGCAGATCCTTGAGCTCTTCCAGAATTGTATCAAACTCGCTAGCGAAAATAAAATTAATCAAAAGAATACGTGGGAGCTGAACTTGATTGACCACTTGGCGGAGCTTGTCAAGGTTGAAGAGGAAAAGGATGCGGAGACGAATTTTCAGAAGGCAAGCTGTACTTTGGAAGCTGGAGTCAAGATTTACTCCTTAAGAGTTGATTCAGTTCACTCCGAGGCATACAAGGTTCTTGGTGGGATGAATCGAGCAGGACAAGACGATGAACAAGATAAAGGTATGGGAGAAGCCAATGCTGACAATGAACCAAATATGGCTACTTCCAAGAAAGAGAGAAAGATGTCACCTTTATCGACACTGGAGTCATCTTTTGAGGCTCTAAATGTGAAGAAGTTTGATGTTGCATTTGCAGTTGATCCACTTTATCATCAGACATCCGCACAATTTGATGAAGGCGGGGCCAAGGGTCTTTTAATGAATAATCTTGGAGTATATGGTAGATGCAGAGTGCTCTTTGACTCATCGGAGGTACCAGGGAAGTGCATATCATCGGATAATCAACATGATAAACCAGATACCATTGATCTTTCTTTTGCTAGGGAATATGTTGAAGAGATGGTATTGAACATGCGGACGAAAGATGAAATTTCACCAACTCTCAGGCATTTGGTTGATAGATTTGATGAAGATAACAGAAGGCCATTAGATACATATACATGTGCTCAGGAATCGGCAGAGCAAGATGATTCTACCTGTAATAATGACATTGACATAGATGGTGATGCATCTCACAACGATGGGACCTGGGATTATGATCACGATGAGCAAACAAGCATGGTGGAGGAGGAACATAACTATGAAAATACAAGTTTTCCCAGTTACCACGAGGAAGACGAACCAAGTTCTTTCCATGGACCTGATTTTGATGACAGACTTGAGAAAGTTGATGGTTTTTTGTTTTTAAGTCTTGGATTCACTTCCAAACAAAATGCTTGGGCAGGTCCTGATCATTGGAAGTACCAAAAAACAAAAGGTTCCGAGGTCAATACTCTTGCAGAACCACCATTAACAGTTAAGCGACAAAGAAGCAAACAACAGCCTGATATTGATTTCACTAAAGCCTTGGAAGAAGAAATGTCTGATCTATTTGCTCCCCCCAAAAACCCCAAGTCGTTGCTGTTGCCTGCAAATAGAGCAATTTGTAGTACAAAACTTCCTGAGGATTGCCACTATCAACCAGAGGACCTTGTCAAATTATTTCTTCTACCCAATGTAAAGTGCCTTGGAAGGAGAGGGAGGAAGTCTTCAGATCAATCAAGGCAACAATATGAGTATTATGGGCAAGCTTCATTCTGCGATGATGATGGTGGCCAGTATGATGATGGCCAATATGATGAGGGGAATGTCCATAGTGATGTCGAGGACTTTAGCACACTTGTTTCTCAACCTCGCCAGGTAAACAAAATTGAAGTCCAGTATGACAAGACGTCCAAACAAGTTGATGTCCAGGCTTTGAAAGAAACCCTTTGGGGCCATGTACAAGAAACTGTTCAAATGTCTACTCAGGGTGAAGAACAGGTGGTGTCCTTCAAGCAAATACTGGGTAGCTTTCCTAGTGACTCCAGAGCTGCTCCAACTATCAATGACATCTCCCCTCATCTGTGTTTCATATGCCTGTTGCATTTAGCCAATGAGCATGGGTTGAAGATCCTTGGCAATACCAATCTGGATGATCTCAGTGTACACCTACCTCTCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

663

Amino Acids

74.48

Weight (kDa)

4.78

Isoelectric Point (pI)

47.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cnd2	PF05786	28 - 547	9.1e-88	Condensin complex subunit 2
Cnd2	PF05786	546 - 657	1.5e-25	Condensin complex subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	589
AatII	GACGTC	2 cut(s)	12, 1718
Acc36I	ACCTGC	1 cut(s)	1217
Acc65I	GGTACC	1 cut(s)	757
AccB1I	GGYRCC	1 cut(s)	757
AccI	GTMKAC	1 cut(s)	1787
AccII	CGCG	4 cut(s)	135, 137, 144, 152
AclWI	GGATC	4 cut(s)	206, 229, 638, 1930
AcoI	YGGCCR	4 cut(s)	3, 57, 1597, 1612
AcsI	RAATTY	2 cut(s)	370, 873
AcuI	CTGAAG	1 cut(s)	1518
AcyI	GRCGYC	2 cut(s)	9, 1715
AfaI	GTAC	6 cut(s)	391, 759, 1247, 1435, 1767, 1971
AfiI	CCNNNNNNNGG	3 cut(s)	55, 156, 328
AflII	CTTAAG	1 cut(s)	421
AflIII	ACRYGT	1 cut(s)	944
AgsI	TTSAA	8 cut(s)	347, 839, 853, 1697, 1744, 1781, 1819, 1933
AhdI	GACNNNNNGTC	1 cut(s)	1714
AjnI	CCWGG	5 cut(s)	126, 760, 1031, 1680, 1734
AluBI	AGCT	8 cut(s)	244, 307, 334, 387, 401, 1574, 1836, 1856
AluI	AGCT	8 cut(s)	244, 307, 334, 387, 401, 1574, 1836, 1856
Alw21I	GWGCWC	3 cut(s)	246, 741, 952
Alw26I	GTCTC	2 cut(s)	78, 359
AlwI	GGATC	4 cut(s)	206, 229, 638, 1930
AlwNI	CAGNNNCTG	1 cut(s)	1232
Ama87I	CYCGRG	1 cut(s)	116
AoxI	GGCC	8 cut(s)	3, 57, 217, 687, 926, 1597, 1612, 1759
ApeKI	GCWGC	3 cut(s)	43, 229, 1856
ApoI	RAATTY	2 cut(s)	370, 873
ArsI	GACNNNNNNTTYG	2 cut(s)	1683, 1715
AseI	ATTAAT	1 cut(s)	285
Asp700I	GAANNNNTTC	1 cut(s)	1776
Asp718I	GGTACC	1 cut(s)	757
AspLEI	GCGC	3 cut(s)	48, 137, 146
AspS9I	GGNCC	6 cut(s)	687, 1029, 1142, 1229, 1471, 1759
AsuC2I	CCSGG	1 cut(s)	216
AsuHPI	GGTGA	4 cut(s)	564, 870, 1019, 1808
AsuNHI	GCTAGC	1 cut(s)	269
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	4 cut(s)	1029, 1142, 1229, 1471
AxyI	CCTNAGG	1 cut(s)	1446
BaeGI	GKGCMC	1 cut(s)	127
BalI	TGGCCA	2 cut(s)	1599, 1614
BanI	GGYRCC	1 cut(s)	757
BanII	GRGCYC	1 cut(s)	246
BauI	CACGAG	1 cut(s)	1112
BbsI	GAAGAC	2 cut(s)	1125, 1524
Bbv12I	GWGCWC	3 cut(s)	246, 741, 952
BbvCI	CCTCAGC	1 cut(s)	14
BbvI	GCAGC	3 cut(s)	55, 241, 1843
BccI	CCATC	7 cut(s)	191, 838, 998, 1019, 1169, 1586, 1604
BciT130I	CCWGG	5 cut(s)	128, 762, 1033, 1682, 1736
BclI	TGATCA	2 cut(s)	1042, 1234
BcnI	CCSGG	1 cut(s)	216
BcoDI	GTCTC	2 cut(s)	78, 359
BfaI	CTAG	3 cut(s)	270, 825, 1842
BfoI	RGCGCY	1 cut(s)	49
BfrI	CTTAAG	1 cut(s)	421
BfuAI	ACCTGC	1 cut(s)	1217
BisI	GCNGC	7 cut(s)	44, 60, 138, 147, 150, 230, 1857
BlsI	GCNGC	7 cut(s)	45, 61, 139, 148, 151, 231, 1858
Bme1390I	CCNGG	6 cut(s)	128, 216, 762, 1033, 1682, 1736
Bme18I	GGWCC	4 cut(s)	1029, 1142, 1229, 1471
BmeRI	GACNNNNNGTC	1 cut(s)	1714
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	6 cut(s)	687, 1029, 1142, 1229, 1471, 1759
BmiI	GGNNCC	7 cut(s)	100, 202, 688, 759, 1030, 1264, 1760
BmrFI	CCNGG	6 cut(s)	128, 216, 762, 1033, 1682, 1736
BmrI	ACTGGG	2 cut(s)	1098, 1838
BmsI	GCATC	4 cut(s)	349, 719, 1000, 1022
BmtI	GCTAGC	1 cut(s)	273
BmuI	ACTGGG	2 cut(s)	1098, 1838
BpiI	GAAGAC	2 cut(s)	1125, 1524
BpmI	CTGGAG	4 cut(s)	53, 423, 608, 1834
Bpu10I	CCTNAGC	2 cut(s)	14, 951
BpuEI	CTTGAG	2 cut(s)	260, 1184
BpuMI	CCSGG	1 cut(s)	216
BsaAI	YACGTR	1 cut(s)	300
BsaBI	GATNNNNATC	2 cut(s)	210, 1041
BsaHI	GRCGYC	2 cut(s)	9, 1715
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 156, 328
Bse1I	ACTGG	6 cut(s)	70, 591, 1104, 1600, 1702, 1833
Bse21I	CCTNAGG	1 cut(s)	1446
Bse8I	GATNNNNATC	2 cut(s)	210, 1041
BseBI	CCWGG	5 cut(s)	128, 762, 1033, 1682, 1736
BseGI	GGATG	4 cut(s)	364, 474, 662, 1963
BseJI	GATNNNNATC	2 cut(s)	210, 1041
BseLI	CCNNNNNNNGG	3 cut(s)	55, 156, 328
BseMII	CTCAG	6 cut(s)	28, 901, 965, 1437, 1805, 1978
BseNI	ACTGG	6 cut(s)	70, 591, 1104, 1600, 1702, 1833
BseRI	GAGGAG	1 cut(s)	1085
BseSI	GKGCMC	1 cut(s)	127
BseXI	GCAGC	3 cut(s)	55, 241, 1843
Bsh1236I	CGCG	4 cut(s)	135, 137, 144, 152
BshFI	GGCC	8 cut(s)	5, 59, 219, 689, 928, 1599, 1614, 1761
BshNI	GGYRCC	1 cut(s)	757
BsiHKAI	GWGCWC	3 cut(s)	246, 741, 952
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	1 cut(s)	216
BslFI	GGGAC	1 cut(s)	1042
BslI	CCNNNNNNNGG	3 cut(s)	55, 156, 328
BsmAI	GTCTC	2 cut(s)	78, 359
BsmBI	CGTCTC	1 cut(s)	359
BsmFI	GGGAC	1 cut(s)	1042
BsnI	GGCC	8 cut(s)	5, 59, 219, 689, 928, 1599, 1614, 1761
BsoBI	CYCGRG	1 cut(s)	116
Bsp1286I	GDGCHC	4 cut(s)	127, 246, 741, 952
Bsp1407I	TGTACA	2 cut(s)	1765, 1969
Bsp19I	CCATGG	2 cut(s)	54, 1138
BspANI	GGCC	8 cut(s)	5, 59, 219, 689, 928, 1599, 1614, 1761
BspCNI	CTCAG	6 cut(s)	27, 900, 964, 1438, 1804, 1977
BspFNI	CGCG	4 cut(s)	135, 137, 144, 152
BspLI	GGNNCC	7 cut(s)	100, 202, 688, 759, 1030, 1264, 1760
BspMI	ACCTGC	1 cut(s)	1217
BspOI	GCTAGC	1 cut(s)	273
BspPI	GGATC	4 cut(s)	206, 229, 638, 1930
BspQI	GCTCTTC	1 cut(s)	251
BspT107I	GGYRCC	1 cut(s)	757
BspTI	CTTAAG	1 cut(s)	421
BsrGI	TGTACA	2 cut(s)	1765, 1969
BsrI	ACTGG	6 cut(s)	70, 591, 1104, 1600, 1702, 1833
BssNI	GRCGYC	2 cut(s)	9, 1715
BssSI	CACGAG	1 cut(s)	1112
BssT1I	CCWWGG	6 cut(s)	54, 690, 1138, 1350, 1510, 1939
Bst2BI	CACGAG	1 cut(s)	1112
Bst2UI	CCWGG	5 cut(s)	128, 762, 1033, 1682, 1736
Bst4CI	ACNGT	3 cut(s)	182, 1300, 1777
Bst6I	CTCTTC	3 cut(s)	251, 342, 834
BstACI	GRCGYC	2 cut(s)	9, 1715
BstAFI	CTTAAG	1 cut(s)	421
BstAUI	TGTACA	2 cut(s)	1765, 1969
BstBAI	YACGTR	1 cut(s)	300
BstC8I	GCNNGC	8 cut(s)	64, 123, 133, 142, 271, 385, 1413, 1572
BstDEI	CTNAG	6 cut(s)	14, 887, 951, 1446, 1791, 1964
BstDSI	CCRYGG	2 cut(s)	54, 1138
BstF5I	GGATG	4 cut(s)	364, 474, 662, 1963
BstFNI	CGCG	4 cut(s)	135, 137, 144, 152
BstH2I	RGCGCY	1 cut(s)	49
BstHHI	GCGC	3 cut(s)	48, 137, 146
BstMAI	GTCTC	2 cut(s)	78, 359
BstMWI	GCNNNNNNNGC	5 cut(s)	137, 141, 143, 146, 1421
BstNI	CCWGG	5 cut(s)	128, 762, 1033, 1682, 1736
BstNSI	RCATGY	2 cut(s)	859, 948
BstSCI	CCNGG	6 cut(s)	126, 214, 760, 1031, 1680, 1734
BstSLI	GKGCMC	1 cut(s)	127
BstUI	CGCG	4 cut(s)	135, 137, 144, 152
BstV1I	GCAGC	3 cut(s)	55, 241, 1843
BstV2I	GAAGAC	2 cut(s)	1125, 1524
BstX2I	RGATCY	2 cut(s)	234, 1935
BstYI	RGATCY	2 cut(s)	234, 1935
Bsu36I	CCTNAGG	1 cut(s)	1446
BsuRI	GGCC	8 cut(s)	5, 59, 219, 689, 928, 1599, 1614, 1761
BtgI	CCRYGG	2 cut(s)	54, 1138
BtgZI	GCGATG	1 cut(s)	1599
BtsCI	GGATG	4 cut(s)	364, 474, 662, 1963
BtsIMutI	CAGTG	2 cut(s)	584, 1972
BveI	ACCTGC	1 cut(s)	1217
Cac8I	GCNNGC	8 cut(s)	64, 123, 133, 142, 271, 385, 1413, 1572
CaiI	CAGNNNCTG	1 cut(s)	1232
CfoI	GCGC	3 cut(s)	48, 137, 146
Cfr13I	GGNCC	6 cut(s)	687, 1029, 1142, 1229, 1471, 1759
Csp6I	GTAC	6 cut(s)	390, 758, 1246, 1434, 1766, 1970
CspCI	CAANNNNNGTGG	2 cut(s)	1047, 1082
CviAII	CATG	8 cut(s)	55, 791, 856, 945, 1063, 1139, 1763, 1925
CviQI	GTAC	6 cut(s)	390, 758, 1246, 1434, 1766, 1970
DdeI	CTNAG	6 cut(s)	14, 887, 951, 1446, 1791, 1964
DrdI	GACNNNNNNGTC	1 cut(s)	589
DriI	GACNNNNNGTC	1 cut(s)	1714
DseDI	GACNNNNNNGTC	1 cut(s)	589
EaeI	YGGCCR	4 cut(s)	3, 57, 1597, 1612
Eam1104I	CTCTTC	3 cut(s)	251, 342, 834
Eam1105I	GACNNNNNGTC	1 cut(s)	1714
EarI	CTCTTC	3 cut(s)	251, 342, 834
EciI	GGCGGA	1 cut(s)	344
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	6 cut(s)	54, 690, 1138, 1350, 1510, 1939
Eco24I	GRGCYC	1 cut(s)	246
Eco47I	GGWCC	4 cut(s)	1029, 1142, 1229, 1471
Eco53kI	GAGCTC	1 cut(s)	244
Eco57I	CTGAAG	1 cut(s)	1518
Eco81I	CCTNAGG	1 cut(s)	1446
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	244
EcoO109I	RGGNCCY	3 cut(s)	1029, 1229, 1471
EcoRII	CCWGG	5 cut(s)	126, 760, 1031, 1680, 1734
EcoT14I	CCWWGG	6 cut(s)	54, 690, 1138, 1350, 1510, 1939
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	6 cut(s)	54, 690, 1138, 1350, 1510, 1939
Esp3I	CGTCTC	1 cut(s)	359
FaeI	CATG	8 cut(s)	58, 794, 859, 948, 1066, 1142, 1766, 1928
FalI	AAGNNNNNCTT	4 cut(s)	376, 408, 1737, 1769
FaqI	GGGAC	1 cut(s)	1042
FatI	CATG	8 cut(s)	54, 790, 855, 944, 1062, 1138, 1762, 1924
FauI	CCCGC	2 cut(s)	71, 677
FauNDI	CATATG	1 cut(s)	1898
FbaI	TGATCA	2 cut(s)	1042, 1234
FblI	GTMKAC	1 cut(s)	1787
Fnu4HI	GCNGC	7 cut(s)	44, 60, 138, 147, 150, 230, 1857
FokI	GGATG	4 cut(s)	371, 481, 649, 1970
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	7 cut(s)	44, 60, 138, 147, 150, 230, 1857
FspBI	CTAG	3 cut(s)	270, 825, 1842
GlaI	GCGC	3 cut(s)	47, 136, 145
GluI	GCNGC	7 cut(s)	44, 60, 138, 147, 150, 230, 1857
GsuI	CTGGAG	4 cut(s)	53, 423, 608, 1834
HaeII	RGCGCY	1 cut(s)	49
HaeIII	GGCC	8 cut(s)	5, 59, 219, 689, 928, 1599, 1614, 1761
HapII	CCGG	1 cut(s)	216
HhaI	GCGC	3 cut(s)	48, 137, 146
Hin1I	GRCGYC	2 cut(s)	9, 1715
Hin1II	CATG	8 cut(s)	58, 794, 859, 948, 1066, 1142, 1766, 1928
Hin6I	GCGC	3 cut(s)	46, 135, 144
HinP1I	GCGC	3 cut(s)	46, 135, 144
HindIII	AAGCTT	1 cut(s)	1572
HpaII	CCGG	1 cut(s)	216
HphI	GGTGA	4 cut(s)	564, 870, 1019, 1808
Hpy166II	GTNNAC	5 cut(s)	439, 1687, 1788, 1970, 1972
Hpy188III	TCNNGA	9 cut(s)	194, 250, 409, 953, 1046, 1232, 1445, 1851, 1955
Hpy8I	GTNNAC	5 cut(s)	439, 1687, 1788, 1970, 1972
Hpy99I	CGWCG	3 cut(s)	11, 110, 173
HpyAV	CCTTC	6 cut(s)	97, 373, 674, 918, 1509, 1825
HpyCH4III	ACNGT	3 cut(s)	182, 1300, 1777
HpyCH4IV	ACGT	3 cut(s)	9, 299, 1715
HpyCH4V	TGCA	8 cut(s)	632, 638, 732, 771, 1013, 1283, 1415, 1909
HpyF10VI	GCNNNNNNNGC	5 cut(s)	137, 141, 143, 146, 1421
HpyF3I	CTNAG	6 cut(s)	14, 887, 951, 1446, 1791, 1964
HpySE526I	ACGT	3 cut(s)	9, 299, 1715
Hsp92I	GRCGYC	2 cut(s)	9, 1715
Hsp92II	CATG	8 cut(s)	58, 794, 859, 948, 1066, 1142, 1766, 1928
HspAI	GCGC	3 cut(s)	46, 135, 144
KpnI	GGTACC	1 cut(s)	761
Ksp22I	TGATCA	2 cut(s)	1042, 1234
LguI	GCTCTTC	1 cut(s)	251
LmnI	GCTCC	5 cut(s)	104, 304, 331, 1384, 1864
Lsp1109I	GCAGC	3 cut(s)	55, 241, 1843
LweI	GCATC	4 cut(s)	349, 719, 1000, 1022
MaeI	CTAG	3 cut(s)	270, 825, 1842
MaeII	ACGT	3 cut(s)	9, 299, 1715
MaeIII	GTNAC	3 cut(s)	570, 1106, 1844
MflI	RGATCY	2 cut(s)	234, 1935
MhlI	GDGCHC	4 cut(s)	127, 246, 741, 952
MlsI	TGGCCA	2 cut(s)	1599, 1614
MluCI	AATT	8 cut(s)	253, 282, 370, 671, 873, 1425, 1481, 1692
MluNI	TGGCCA	2 cut(s)	1599, 1614
MlyI	GAGTC	4 cut(s)	414, 599, 740, 1841
MmeI	TCCRAC	3 cut(s)	101, 126, 1886
Mox20I	TGGCCA	2 cut(s)	1599, 1614
Mph1103I	ATGCAT	1 cut(s)	1015
MroXI	GAANNNNTTC	1 cut(s)	1776
MscI	TGGCCA	2 cut(s)	1599, 1614
MseI	TTAA	6 cut(s)	285, 422, 701, 1190, 1295, 1302
MslI	CAYNNNNRTG	5 cut(s)	195, 943, 1023, 1083, 1641
Msp20I	TGGCCA	2 cut(s)	1599, 1614
MspCI	CTTAAG	1 cut(s)	421
MspI	CCGG	1 cut(s)	216
MspR9I	CCNGG	6 cut(s)	128, 216, 762, 1033, 1682, 1736
MvaI	CCWGG	5 cut(s)	128, 762, 1033, 1682, 1736
MvnI	CGCG	4 cut(s)	135, 137, 144, 152
MwoI	GCNNNNNNNGC	5 cut(s)	137, 141, 143, 146, 1421
NciI	CCSGG	1 cut(s)	216
NcoI	CCATGG	2 cut(s)	54, 1138
NdeI	CATATG	1 cut(s)	1898
NheI	GCTAGC	1 cut(s)	269
NlaIII	CATG	8 cut(s)	58, 794, 859, 948, 1066, 1142, 1766, 1928
NlaIV	GGNNCC	7 cut(s)	100, 202, 688, 759, 1030, 1264, 1760
NmeAIII	GCCGAG	1 cut(s)	75
NmuCI	GTSAC	2 cut(s)	570, 1844
NsiI	ATGCAT	1 cut(s)	1015
NspI	RCATGY	2 cut(s)	859, 948
PaeR7I	CTCGAG	1 cut(s)	116
PciI	ACATGT	1 cut(s)	944
PciSI	GCTCTTC	1 cut(s)	251
PcsI	WCGNNNNNNNCGW	3 cut(s)	102, 114, 1119
PdmI	GAANNNNTTC	1 cut(s)	1776
PfeI	GAWTC	7 cut(s)	154, 206, 431, 472, 956, 974, 1200
PflFI	GACNNNGTC	1 cut(s)	1475
PkrI	GCNGC	7 cut(s)	45, 61, 139, 148, 151, 231, 1858
PleI	GAGTC	4 cut(s)	413, 598, 740, 1841
PpsI	GAGTC	4 cut(s)	413, 598, 740, 1841
Ppu21I	YACGTR	1 cut(s)	300
PpuMI	RGGWCCY	3 cut(s)	1029, 1229, 1471
PscI	ACATGT	1 cut(s)	944
PshBI	ATTAAT	1 cut(s)	285
Psp124BI	GAGCTC	1 cut(s)	246
Psp5II	RGGWCCY	3 cut(s)	1029, 1229, 1471
Psp6I	CCWGG	5 cut(s)	126, 760, 1031, 1680, 1734
PspGI	CCWGG	5 cut(s)	126, 760, 1031, 1680, 1734
PspN4I	GGNNCC	7 cut(s)	100, 202, 688, 759, 1030, 1264, 1760
PspPI	GGNCC	6 cut(s)	687, 1029, 1142, 1229, 1471, 1759
PspPPI	RGGWCCY	3 cut(s)	1029, 1229, 1471
PspXI	VCTCGAGB	1 cut(s)	116
PstNI	CAGNNNCTG	1 cut(s)	1232
PsuI	RGATCY	2 cut(s)	234, 1935
PsyI	GACNNNGTC	1 cut(s)	1475
RsaI	GTAC	6 cut(s)	391, 759, 1247, 1435, 1767, 1971
RsaNI	GTAC	6 cut(s)	390, 758, 1246, 1434, 1766, 1970
RseI	CAYNNNNRTG	5 cut(s)	195, 943, 1023, 1083, 1641
SacI	GAGCTC	1 cut(s)	246
SapI	GCTCTTC	1 cut(s)	251
SaqAI	TTAA	6 cut(s)	285, 422, 701, 1190, 1295, 1302
SatI	GCNGC	7 cut(s)	44, 60, 138, 147, 150, 230, 1857
Sau96I	GGNCC	6 cut(s)	687, 1029, 1142, 1229, 1471, 1759
SchI	GAGTC	4 cut(s)	414, 599, 740, 1841
ScrFI	CCNGG	6 cut(s)	128, 216, 762, 1033, 1682, 1736
SduI	GDGCHC	4 cut(s)	127, 246, 741, 952
SfaNI	GCATC	4 cut(s)	349, 719, 1000, 1022
Sfr274I	CTCGAG	1 cut(s)	116
SinI	GGWCC	4 cut(s)	1029, 1142, 1229, 1471
SlaI	CTCGAG	1 cut(s)	116
SmiMI	CAYNNNNRTG	5 cut(s)	195, 943, 1023, 1083, 1641
SmlI	CTYRAG	4 cut(s)	116, 239, 421, 1163
SmoI	CTYRAG	4 cut(s)	116, 239, 421, 1163
Sse9I	AATT	8 cut(s)	253, 282, 370, 671, 873, 1425, 1481, 1692
SspMI	CTAG	3 cut(s)	270, 825, 1842
SstI	GAGCTC	1 cut(s)	246
StyD4I	CCNGG	6 cut(s)	126, 214, 760, 1031, 1680, 1734
StyI	CCWWGG	6 cut(s)	54, 690, 1138, 1350, 1510, 1939
TaaI	ACNGT	3 cut(s)	182, 1300, 1777
TaiI	ACGT	3 cut(s)	12, 302, 1718
TaqI	TCGA	5 cut(s)	117, 222, 475, 581, 1647
TasI	AATT	8 cut(s)	253, 282, 370, 671, 873, 1425, 1481, 1692
TatI	WGTACW	4 cut(s)	389, 1433, 1765, 1969
TauI	GCSGC	4 cut(s)	62, 140, 149, 152
TfiI	GAWTC	7 cut(s)	154, 206, 431, 472, 956, 974, 1200
Tru1I	TTAA	6 cut(s)	285, 422, 701, 1190, 1295, 1302
Tru9I	TTAA	6 cut(s)	285, 422, 701, 1190, 1295, 1302
TscAI	CASTG	2 cut(s)	591, 1972
TseFI	GTSAC	2 cut(s)	570, 1844
TseI	GCWGC	3 cut(s)	43, 229, 1856
Tsp45I	GTSAC	2 cut(s)	570, 1844
TspGWI	ACGGA	1 cut(s)	157
TspRI	CASTG	2 cut(s)	591, 1972
Tth111I	GACNNNGTC	1 cut(s)	1475
Vha464I	CTTAAG	1 cut(s)	421
VpaK11BI	GGWCC	4 cut(s)	1029, 1142, 1229, 1471
VspI	ATTAAT	1 cut(s)	285
XapI	RAATTY	2 cut(s)	370, 873
XceI	RCATGY	2 cut(s)	859, 948
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1607
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	1787
XmnI	GAANNNNTTC	1 cut(s)	1776
XspI	CTAG	3 cut(s)	270, 825, 1842
ZraI	GACGTC	2 cut(s)	10, 1716
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.