Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002141

Physical Location & Seq

Genomic Coordinates Reverse (-)

2571510 .. 2575563

Gene Structure 4054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g03480.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGGCTGACACTCTGAGCCCTAATCCGGCAACCCAAAAGCAGAGGCTCCCAATGGCCGCTCGTCTCCAGTCTCCAACGAGCCCCTTCTTCCTCGGCTCCAACGACGACCACCGCGAGCGTGCGCAGGCTCGCGCAGGACGCGCCGCCGCAATAAGAAGAAAGTCCATTGCGCTCAATCTGCCGCCACAGCAGGGAGACCCCGATCCCGGCCTGGGCAAGGAGCAGATCTTCGAGCTGTTCCAGAATTGCATCAAGCTTGCAAGTGAAAATGATGCCAATGCTGACAATGGAAAAGATGCAGCTAATTCCAAGCATGAGACGCAGAAAAAGGTTGACTATTCTCTGACTCACTACAATGTTTTACTGGACTCCGGTACACTAAATGCTGACATACATTCATACATGCAGATATCTCCCTTATCAACGCTGGAATCATCTTTTGAGGCTCTAAATGTGAAAAAGTTTGACGGCCAAGTTTGTAATACAATTTTGTTTGTATTTTCAGTTGCATTTGCAGTTGATCCCCTTTATCATCAGACGTCTGCACAATTTGATGAAGGTGGGGCCAAGGGTCTTTTAATGAATAATCTTGGAGTGTATGGTGGATGCAGAGTGCTCTTTGACTCTTCGGAAGTACCAGGGAAGTGCACAGCATCTGATAATCAACTCGATAAATCAGATACCATTGATCTTTCTTTTGCTAGTGAATATGTAGAACAGATGGTATTGAACATGCGAATCAAAGATGAAATTTCACCAACTCTGAGGAGTTTAGTTGATCGATTTGATGAGGATAACAGAAGGCCACCAGATATATATACATGTGATCAAGAATCAGCAGAGCAAGTTGATGCTGCCAATAACAATGAAGCTGATTTTGATTGTGATGTATCTGAGAATTGCGGGAACTGGGATTATGACCATGATGACCAAACAAGTGTCGTGGAGGAGGGCCTTAACTGTGAAAGTTCAATGCTCCCTAGTTATCATGAGGAAAATGAACCGGGTGCCTACCATGAACTTGATACGGATGAGAGACTTGAGAAAGTTGATGGGTATTTGTTCTTAAGTCTTGGATTTACTTCAAAACAAAATGCTTGGGCAGGTCCTGATCATTGGAAGTATCGAAAAACTAAAGTTCCCGAGAACGATCCTCCTGCAGAACAACCAGAAACAGCTAAACAAAAGAAGACCAAAGCACAGCAGGATCTTGATTTCACAAAATCCTTGGAAGAAGAGTTCTCAGATATTTTTGCTCCTCCCAAAAATCCGAAATCCTTACTGCTCCCTGCAAATAGAGCACCCTGTAATACAAAACTTCCTGAGGATTGCCACTATCAACCAGAGGAGCTTATAAAGCTATTTCTTCTACCTCAAGTAAAGTGCCTTGGAAGGCGATGCAGGAAGCACTCAGATGAATCCAGGCAACAATGTGACGCTGATGGGCAATTTCCATACTACGATGATGAAAGTGGACTCGGGGGCCAATATGATGACGGGAATATCCATAGTGATGTGGAGGACTTTAGCACACTTGTTTCTCAGCCTCGCCAGGTAAACAAAGTTGAAGTCCAGTATGACAAGACTTCCAAACAAGTCGATGTCCAGGCTTTGAAAGAAACTCTTTGGAACCATGTACAAAAATCTGTTCAAACATCAATCCAGGGTGAAGAACAATTGGTATCCTTCAAGCAAATGTTGGGCAACTTTCCGGGTGACTGCAGGGCTGCTGAAACTATCAATGACATCTCCCCTCACCTGTGTTTCATCTGCCTTCTACATTTGGCCAATGAGCATGGTTTGAGGATCGATCTGGGCTCCAACAATCTGGATGATCTCAGCGTTCACCTTACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000793 GO:0000794 GO:0000796 GO:0000799 GO:0000819 GO:0001671 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006323 GO:0006996 GO:0007049 GO:0007059 GO:0007076 GO:0008047 GO:0008150 GO:0009987 GO:0010911 GO:0010912 GO:0016043 GO:0019899 GO:0022402 GO:0030234 GO:0030261 GO:0031974 GO:0031981 GO:0032781 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043462 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044547 GO:0044815 GO:0048285 GO:0050790 GO:0051276 GO:0051336 GO:0051345 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0071103 GO:0071840 GO:0072586 GO:0072587 GO:0098772 GO:0098813 GO:0140014 GO:1903047 GO:2000371 GO:2000373

KEGG Pathways

Metabolic & Signaling

ko04111 map04111

Pfam Domains

Protein Families

Cnd2

Protein Analysis

619

Amino Acids

69.22

Weight (kDa)

4.71

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32590
fragaria_vesca	FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_3g23280 FvH4_6g42730 FvH4_6g42730 FvH4_6g42730
malus_domestica	MD03G1195600.v1.1 MD03G1195700.v1.1 MD09G1071300.v1.1 MD11G1212100.v1.1 MD17G1101300.v1.1
prunus_persica	Prupe.3G213700_v2.0.a1 Prupe.4G220400_v2.0.a1
pyrus_communis	pycom03g14790 pycom09g03480 pycom17g09560 pycom17g09570
rosa_chinensis	RchiOBHm_Chr2g0158621 RchiOBHm_Chr5g0041001
rosa_laevigata	RLG00000021100 RLG00000034019
rosa_multiflora	Rmu_co8379437.1_g000001 Rmu_sc0005650.1_g000010 Rmu_sc0030339.1_g000001 Rmu_sc0040010.1_g000001 Rmu_sc0042494.1_g000001 Rmu_ssc0000284.1_g000007
rosa_roxburghii	Rroxscaffold_1G00039700 Rroxscaffold_2G00091170
rosa_rugosa	Rorug02G0471000 Rorug05G0189400
rosa_samantha	Rh2AG536600 Rh2BG549700 Rh2CG520300 Rh2DG559400 Rh5AG274600 Rh5BG279900 Rh5CG312000 Rh5DG287900
rosa_wichuraiana	Rw2G044420 Rw5G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1355
AatII	GACGTC	1 cut(s)	542
Acc16I	TGCGCA	1 cut(s)	123
Acc36I	ACCTGC	1 cut(s)	1094
AccB1I	GGYRCC	1 cut(s)	1007
AccBSI	CCGCTC	1 cut(s)	59
AccII	CGCG	3 cut(s)	114, 132, 141
AciI	CCGC	6 cut(s)	57, 112, 144, 147, 182, 903
AclWI	GGATC	5 cut(s)	197, 515, 1145, 1215, 1814
AcoI	YGGCCR	3 cut(s)	54, 469, 1785
AcsI	RAATTY	1 cut(s)	750
AcyI	GRCGYC	1 cut(s)	539
AfaI	GTAC	3 cut(s)	376, 636, 1638
AfiI	CCNNNNNNNGG	5 cut(s)	25, 191, 206, 212, 217
AflII	CTTAAG	1 cut(s)	1066
AflIII	ACRYGT	1 cut(s)	821
AgsI	TTSAA	7 cut(s)	730, 972, 1086, 1568, 1615, 1652, 1690
AjnI	CCWGG	6 cut(s)	210, 637, 1421, 1551, 1605, 1662
AloI	GAACNNNNNNTCC	2 cut(s)	1223, 1255
AluBI	AGCT	7 cut(s)	235, 256, 302, 872, 1178, 1351, 1360
AluI	AGCT	7 cut(s)	235, 256, 302, 872, 1178, 1351, 1360
Alw21I	GWGCWC	3 cut(s)	618, 650, 1303
Alw26I	GTCTC	5 cut(s)	68, 75, 189, 311, 1030
Alw44I	GTGCAC	1 cut(s)	646
AlwI	GGATC	5 cut(s)	197, 515, 1145, 1215, 1814
AlwNI	CAGNNNCTG	2 cut(s)	656, 1109
Ama87I	CYCGRG	2 cut(s)	1142, 1478
AoxI	GGCC	8 cut(s)	54, 208, 469, 564, 803, 952, 1483, 1785
ApaLI	GTGCAC	1 cut(s)	646
ApeKI	GCWGC	3 cut(s)	299, 854, 1727
ApoI	RAATTY	1 cut(s)	750
ArsI	GACNNNNNNTTYG	2 cut(s)	1554, 1586
AspLEI	GCGC	4 cut(s)	124, 134, 143, 172
AspS9I	GGNCC	4 cut(s)	564, 952, 1106, 1483
AsuC2I	CCSGG	3 cut(s)	207, 1005, 1713
AsuHPI	GGTGA	5 cut(s)	747, 1679, 1727, 1748, 1838
AvaI	CYCGRG	2 cut(s)	1142, 1478
AvaII	GGWCC	1 cut(s)	1106
AxyI	CCTNAGG	1 cut(s)	1323
BaeGI	GKGCMC	1 cut(s)	650
BalI	TGGCCA	1 cut(s)	1787
BanI	GGYRCC	1 cut(s)	1007
BanII	GRGCYC	3 cut(s)	20, 83, 1820
BbsI	GAAGAC	1 cut(s)	1196
Bbv12I	GWGCWC	3 cut(s)	618, 650, 1303
BbvI	GCAGC	3 cut(s)	311, 841, 1714
BccI	CCATC	3 cut(s)	715, 1046, 1436
BceAI	ACGGC	1 cut(s)	484
BcgI	CGANNNNNNTGC	2 cut(s)	1139, 1173
BciT130I	CCWGG	6 cut(s)	212, 639, 1423, 1553, 1607, 1664
BciVI	GTATCC	1 cut(s)	1693
BclI	TGATCA	2 cut(s)	826, 1111
BcnI	CCSGG	3 cut(s)	207, 1005, 1713
BcoDI	GTCTC	5 cut(s)	68, 75, 189, 311, 1030
BfaI	CTAG	2 cut(s)	702, 981
BfmI	CTRYAG	2 cut(s)	1158, 1720
BfrI	CTTAAG	1 cut(s)	1066
BfuAI	ACCTGC	1 cut(s)	1094
BfuI	GTATCC	1 cut(s)	1693
BglII	AGATCT	1 cut(s)	225
BisI	GCNGC	7 cut(s)	57, 144, 147, 182, 300, 855, 1728
BlsI	GCNGC	7 cut(s)	58, 145, 148, 183, 301, 856, 1729
Bme1390I	CCNGG	9 cut(s)	207, 212, 639, 1005, 1423, 1553, 1607, 1664, 1713
Bme18I	GGWCC	1 cut(s)	1106
BmeT110I	CYCGRG	2 cut(s)	1142, 1478
BmgT120I	GGNCC	4 cut(s)	564, 952, 1106, 1483
BmiI	GGNNCC	7 cut(s)	47, 97, 565, 1009, 1484, 1631, 1819
BmrFI	CCNGG	9 cut(s)	207, 212, 639, 1005, 1423, 1553, 1607, 1664, 1713
BmrI	ACTGGG	1 cut(s)	919
BmsI	GCATC	7 cut(s)	258, 262, 286, 596, 662, 841, 1388
BmuI	ACTGGG	1 cut(s)	919
BpiI	GAAGAC	1 cut(s)	1196
BpmI	CTGGAG	1 cut(s)	50
BpuEI	CTTGAG	2 cut(s)	1061, 1359
BpuMI	CCSGG	3 cut(s)	207, 1005, 1713
Bsa29I	ATCGAT	2 cut(s)	781, 1809
BsaAI	YACGTR	1 cut(s)	1854
BsaHI	GRCGYC	1 cut(s)	539
BsaI	GGTCTC	1 cut(s)	189
BsaJI	CCNNGG	7 cut(s)	91, 211, 567, 638, 1227, 1387, 1663
BsaWI	WCCGGW	1 cut(s)	371
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 191, 206, 212, 217
Bse1I	ACTGG	4 cut(s)	67, 369, 914, 1573
Bse21I	CCTNAGG	1 cut(s)	1323
Bse3DI	GCAATG	1 cut(s)	165
BseBI	CCWGG	6 cut(s)	212, 639, 1423, 1553, 1607, 1664
BseCI	ATCGAT	2 cut(s)	781, 1809
BseDI	CCNNGG	7 cut(s)	91, 211, 567, 638, 1227, 1387, 1663
BseGI	GGATG	3 cut(s)	611, 1036, 1837
BseLI	CCNNNNNNNGG	5 cut(s)	25, 191, 206, 212, 217
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	8 cut(s)	5, 755, 885, 1257, 1314, 1425, 1556, 1852
BseNI	ACTGG	4 cut(s)	67, 369, 914, 1573
BseRI	GAGGAG	4 cut(s)	781, 962, 1248, 1361
BseSI	GKGCMC	1 cut(s)	650
BseXI	GCAGC	3 cut(s)	311, 841, 1714
BsgI	GTGCAG	1 cut(s)	528
Bsh1236I	CGCG	3 cut(s)	114, 132, 141
BshFI	GGCC	8 cut(s)	56, 210, 471, 566, 805, 954, 1485, 1787
BshNI	GGYRCC	1 cut(s)	1007
BshVI	ATCGAT	2 cut(s)	781, 1809
BsiHKAI	GWGCWC	3 cut(s)	618, 650, 1303
BsiHKCI	CYCGRG	2 cut(s)	1142, 1478
BsiSI	CCGG	5 cut(s)	26, 207, 372, 1004, 1712
BslI	CCNNNNNNNGG	5 cut(s)	25, 191, 206, 212, 217
BsmAI	GTCTC	5 cut(s)	68, 75, 189, 311, 1030
BsmBI	CGTCTC	2 cut(s)	68, 311
BsnI	GGCC	8 cut(s)	56, 210, 471, 566, 805, 954, 1485, 1787
Bso31I	GGTCTC	1 cut(s)	189
BsoBI	CYCGRG	2 cut(s)	1142, 1478
Bsp1286I	GDGCHC	6 cut(s)	20, 83, 618, 650, 1303, 1820
Bsp1407I	TGTACA	1 cut(s)	1636
BspACI	CCGC	6 cut(s)	57, 112, 144, 147, 182, 903
BspANI	GGCC	8 cut(s)	56, 210, 471, 566, 805, 954, 1485, 1787
BspCNI	CTCAG	8 cut(s)	6, 756, 886, 1256, 1315, 1424, 1555, 1851
BspDI	ATCGAT	2 cut(s)	781, 1809
BspFNI	CGCG	3 cut(s)	114, 132, 141
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	7 cut(s)	47, 97, 565, 1009, 1484, 1631, 1819
BspMAI	CTGCAG	2 cut(s)	1162, 1724
BspMI	ACCTGC	1 cut(s)	1094
BspPI	GGATC	5 cut(s)	197, 515, 1145, 1215, 1814
BspT107I	GGYRCC	1 cut(s)	1007
BspTI	CTTAAG	1 cut(s)	1066
BspTNI	GGTCTC	1 cut(s)	189
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	1 cut(s)	165
BsrGI	TGTACA	1 cut(s)	1636
BsrI	ACTGG	4 cut(s)	67, 369, 914, 1573
BssECI	CCNNGG	7 cut(s)	91, 211, 567, 638, 1227, 1387, 1663
BssNI	GRCGYC	1 cut(s)	539
BssT1I	CCWWGG	3 cut(s)	567, 1227, 1387
Bst2UI	CCWGG	6 cut(s)	212, 639, 1423, 1553, 1607, 1664
Bst4CI	ACNGT	1 cut(s)	962
Bst6I	CTCTTC	2 cut(s)	631, 1230
BstACI	GRCGYC	1 cut(s)	539
BstAFI	CTTAAG	1 cut(s)	1066
BstAUI	TGTACA	1 cut(s)	1636
BstBAI	YACGTR	1 cut(s)	1854
BstC8I	GCNNGC	5 cut(s)	116, 120, 126, 130, 258
BstDEI	CTNAG	8 cut(s)	14, 764, 894, 1243, 1323, 1411, 1542, 1838
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	3 cut(s)	611, 1036, 1837
BstFNI	CGCG	3 cut(s)	114, 132, 141
BstHHI	GCGC	4 cut(s)	124, 134, 143, 172
BstMAI	GTCTC	5 cut(s)	68, 75, 189, 311, 1030
BstMWI	GCNNNNNNNGC	7 cut(s)	138, 140, 178, 187, 319, 1298, 1357
BstNI	CCWGG	6 cut(s)	212, 639, 1423, 1553, 1607, 1664
BstNSI	RCATGY	3 cut(s)	406, 736, 825
BstSCI	CCNGG	9 cut(s)	205, 210, 637, 1003, 1421, 1551, 1605, 1662, 1711
BstSFI	CTRYAG	2 cut(s)	1158, 1720
BstSLI	GKGCMC	1 cut(s)	650
BstUI	CGCG	3 cut(s)	114, 132, 141
BstV1I	GCAGC	3 cut(s)	311, 841, 1714
BstV2I	GAAGAC	1 cut(s)	1196
BstX2I	RGATCY	2 cut(s)	225, 1207
BstXI	CCANNNNNNTGG	1 cut(s)	1828
BstYI	RGATCY	2 cut(s)	225, 1207
Bsu15I	ATCGAT	2 cut(s)	781, 1809
Bsu36I	CCTNAGG	1 cut(s)	1323
BsuI	GTATCC	1 cut(s)	1693
BsuRI	GGCC	8 cut(s)	56, 210, 471, 566, 805, 954, 1485, 1787
BsuTUI	ATCGAT	2 cut(s)	781, 1809
BtgZI	GCGATG	1 cut(s)	1411
BtsCI	GGATG	3 cut(s)	611, 1036, 1837
BveI	ACCTGC	1 cut(s)	1094
Cac8I	GCNNGC	5 cut(s)	116, 120, 126, 130, 258
CaiI	CAGNNNCTG	2 cut(s)	656, 1109
CciI	TCATGA	1 cut(s)	988
CfoI	GCGC	4 cut(s)	124, 134, 143, 172
Cfr13I	GGNCC	4 cut(s)	564, 952, 1106, 1483
ClaI	ATCGAT	2 cut(s)	781, 1809
CseI	GACGC	3 cut(s)	147, 328, 1445
Csp6I	GTAC	3 cut(s)	375, 635, 1637
CspCI	CAANNNNNGTGG	2 cut(s)	924, 959
CviAII	CATG	9 cut(s)	314, 403, 733, 822, 923, 989, 1016, 1634, 1796
CviQI	GTAC	3 cut(s)	375, 635, 1637
DdeI	CTNAG	8 cut(s)	14, 764, 894, 1243, 1323, 1411, 1542, 1838
EaeI	YGGCCR	3 cut(s)	54, 469, 1785
Eam1104I	CTCTTC	2 cut(s)	631, 1230
EarI	CTCTTC	2 cut(s)	631, 1230
Eco130I	CCWWGG	3 cut(s)	567, 1227, 1387
Eco24I	GRGCYC	3 cut(s)	20, 83, 1820
Eco31I	GGTCTC	1 cut(s)	189
Eco32I	GATATC	1 cut(s)	411
Eco47I	GGWCC	1 cut(s)	1106
Eco81I	CCTNAGG	1 cut(s)	1323
Eco88I	CYCGRG	2 cut(s)	1142, 1478
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	2 cut(s)	952, 1106
EcoRII	CCWGG	6 cut(s)	210, 637, 1421, 1551, 1605, 1662
EcoRV	GATATC	1 cut(s)	411
EcoT14I	CCWWGG	3 cut(s)	567, 1227, 1387
EcoT38I	GRGCYC	3 cut(s)	20, 83, 1820
ErhI	CCWWGG	3 cut(s)	567, 1227, 1387
Esp3I	CGTCTC	2 cut(s)	68, 311
FaeI	CATG	9 cut(s)	317, 406, 736, 825, 926, 992, 1019, 1637, 1799
FalI	AAGNNNNNCTT	2 cut(s)	1608, 1640
FatI	CATG	9 cut(s)	313, 402, 732, 821, 922, 988, 1015, 1633, 1795
FauI	CCCGC	1 cut(s)	896
FbaI	TGATCA	2 cut(s)	826, 1111
Fnu4HI	GCNGC	7 cut(s)	57, 144, 147, 182, 300, 855, 1728
FokI	GGATG	3 cut(s)	618, 1043, 1844
FriOI	GRGCYC	3 cut(s)	20, 83, 1820
Fsp4HI	GCNGC	7 cut(s)	57, 144, 147, 182, 300, 855, 1728
FspBI	CTAG	2 cut(s)	702, 981
FspI	TGCGCA	1 cut(s)	123
GlaI	GCGC	4 cut(s)	123, 133, 142, 171
GluI	GCNGC	7 cut(s)	57, 144, 147, 182, 300, 855, 1728
GsuI	CTGGAG	1 cut(s)	50
HaeIII	GGCC	8 cut(s)	56, 210, 471, 566, 805, 954, 1485, 1787
HapII	CCGG	5 cut(s)	26, 207, 372, 1004, 1712
HgaI	GACGC	3 cut(s)	147, 328, 1445
HhaI	GCGC	4 cut(s)	124, 134, 143, 172
Hin1I	GRCGYC	1 cut(s)	539
Hin1II	CATG	9 cut(s)	317, 406, 736, 825, 926, 992, 1019, 1637, 1799
Hin6I	GCGC	4 cut(s)	122, 132, 141, 170
HinP1I	GCGC	4 cut(s)	122, 132, 141, 170
HincII	GTYRAC	1 cut(s)	334
HindII	GTYRAC	1 cut(s)	334
HindIII	AAGCTT	1 cut(s)	254
HinfI	GANTC	8 cut(s)	346, 368, 431, 623, 738, 833, 1418, 1476
HpaII	CCGG	5 cut(s)	26, 207, 372, 1004, 1712
HphI	GGTGA	5 cut(s)	747, 1679, 1727, 1748, 1838
Hpy166II	GTNNAC	6 cut(s)	334, 377, 648, 1475, 1558, 1846
Hpy188III	TCNNGA	8 cut(s)	241, 830, 989, 1109, 1142, 1211, 1322, 1829
Hpy8I	GTNNAC	6 cut(s)	334, 377, 648, 1475, 1558, 1846
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	6 cut(s)	94, 551, 795, 1386, 1696, 1784
HpyCH4III	ACNGT	1 cut(s)	962
HpyCH4IV	ACGT	2 cut(s)	539, 1853
HpyF10VI	GCNNNNNNNGC	7 cut(s)	138, 140, 178, 187, 319, 1298, 1357
HpyF3I	CTNAG	8 cut(s)	14, 764, 894, 1243, 1323, 1411, 1542, 1838
HpySE526I	ACGT	2 cut(s)	539, 1853
Hsp92I	GRCGYC	1 cut(s)	539
Hsp92II	CATG	9 cut(s)	317, 406, 736, 825, 926, 992, 1019, 1637, 1799
HspAI	GCGC	4 cut(s)	122, 132, 141, 170
Ksp22I	TGATCA	2 cut(s)	826, 1111
LmnI	GCTCC	8 cut(s)	51, 101, 220, 981, 1261, 1290, 1348, 1823
Lsp1109I	GCAGC	3 cut(s)	311, 841, 1714
LweI	GCATC	7 cut(s)	258, 262, 286, 596, 662, 841, 1388
MaeI	CTAG	2 cut(s)	702, 981
MaeII	ACGT	2 cut(s)	539, 1853
MaeIII	GTNAC	2 cut(s)	1433, 1715
MbiI	CCGCTC	1 cut(s)	59
MboII	GAAGA	9 cut(s)	79, 168, 220, 618, 1201, 1244, 1247, 1358, 1682
MfeI	CAATTG	1 cut(s)	1676
MflI	RGATCY	2 cut(s)	225, 1207
MhlI	GDGCHC	6 cut(s)	20, 83, 618, 650, 1303, 1820
MlsI	TGGCCA	1 cut(s)	1787
MluCI	AATT	8 cut(s)	244, 304, 486, 548, 750, 898, 1448, 1676
MluNI	TGGCCA	1 cut(s)	1787
MlyI	GAGTC	4 cut(s)	340, 362, 617, 1470
MmeI	TCCRAC	3 cut(s)	98, 123, 1845
Mox20I	TGGCCA	1 cut(s)	1787
MscI	TGGCCA	1 cut(s)	1787
MseI	TTAA	3 cut(s)	578, 957, 1067
MslI	CAYNNNNRTG	3 cut(s)	354, 1413, 1512
Msp20I	TGGCCA	1 cut(s)	1787
MspCI	CTTAAG	1 cut(s)	1066
MspI	CCGG	5 cut(s)	26, 207, 372, 1004, 1712
MspR9I	CCNGG	9 cut(s)	207, 212, 639, 1005, 1423, 1553, 1607, 1664, 1713
MunI	CAATTG	1 cut(s)	1676
MvaI	CCWGG	6 cut(s)	212, 639, 1423, 1553, 1607, 1664
MvnI	CGCG	3 cut(s)	114, 132, 141
MwoI	GCNNNNNNNGC	7 cut(s)	138, 140, 178, 187, 319, 1298, 1357
NciI	CCSGG	3 cut(s)	207, 1005, 1713
NlaIII	CATG	9 cut(s)	317, 406, 736, 825, 926, 992, 1019, 1637, 1799
NlaIV	GGNNCC	7 cut(s)	47, 97, 565, 1009, 1484, 1631, 1819
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	2 cut(s)	1433, 1715
NsbI	TGCGCA	1 cut(s)	123
NspI	RCATGY	3 cut(s)	406, 736, 825
PagI	TCATGA	1 cut(s)	988
PciI	ACATGT	1 cut(s)	821
PcsI	WCGNNNNNNNCGW	2 cut(s)	99, 111
PfeI	GAWTC	4 cut(s)	431, 738, 833, 1418
PkrI	GCNGC	7 cut(s)	58, 145, 148, 183, 301, 856, 1729
PleI	GAGTC	4 cut(s)	340, 362, 617, 1470
PpsI	GAGTC	4 cut(s)	340, 362, 617, 1470
Ppu21I	YACGTR	1 cut(s)	1854
PpuMI	RGGWCCY	1 cut(s)	1106
PscI	ACATGT	1 cut(s)	821
PsiI	TTATAA	1 cut(s)	1355
Psp5II	RGGWCCY	1 cut(s)	1106
Psp6I	CCWGG	6 cut(s)	210, 637, 1421, 1551, 1605, 1662
PspGI	CCWGG	6 cut(s)	210, 637, 1421, 1551, 1605, 1662
PspN4I	GGNNCC	7 cut(s)	47, 97, 565, 1009, 1484, 1631, 1819
PspPI	GGNCC	4 cut(s)	564, 952, 1106, 1483
PspPPI	RGGWCCY	1 cut(s)	1106
PstI	CTGCAG	2 cut(s)	1162, 1724
PstNI	CAGNNNCTG	2 cut(s)	656, 1109
PsuI	RGATCY	2 cut(s)	225, 1207
RsaI	GTAC	3 cut(s)	376, 636, 1638
RsaNI	GTAC	3 cut(s)	375, 635, 1637
RseI	CAYNNNNRTG	3 cut(s)	354, 1413, 1512
SaqAI	TTAA	3 cut(s)	578, 957, 1067
SatI	GCNGC	7 cut(s)	57, 144, 147, 182, 300, 855, 1728
Sau96I	GGNCC	4 cut(s)	564, 952, 1106, 1483
SchI	GAGTC	4 cut(s)	340, 362, 617, 1470
ScrFI	CCNGG	9 cut(s)	207, 212, 639, 1005, 1423, 1553, 1607, 1664, 1713
SduI	GDGCHC	6 cut(s)	20, 83, 618, 650, 1303, 1820
SfaNI	GCATC	7 cut(s)	258, 262, 286, 596, 662, 841, 1388
SfcI	CTRYAG	2 cut(s)	1158, 1720
SinI	GGWCC	1 cut(s)	1106
SmiMI	CAYNNNNRTG	3 cut(s)	354, 1413, 1512
SmlI	CTYRAG	3 cut(s)	1040, 1066, 1374
SmoI	CTYRAG	3 cut(s)	1040, 1066, 1374
Sse9I	AATT	8 cut(s)	244, 304, 486, 548, 750, 898, 1448, 1676
SsiI	CCGC	6 cut(s)	57, 112, 144, 147, 182, 903
SspMI	CTAG	2 cut(s)	702, 981
StyD4I	CCNGG	9 cut(s)	205, 210, 637, 1003, 1421, 1551, 1605, 1662, 1711
StyI	CCWWGG	3 cut(s)	567, 1227, 1387
TaaI	ACNGT	1 cut(s)	962
TaiI	ACGT	2 cut(s)	542, 1856
TaqI	TCGA	6 cut(s)	231, 669, 781, 1126, 1599, 1809
TasI	AATT	8 cut(s)	244, 304, 486, 548, 750, 898, 1448, 1676
TatI	WGTACW	1 cut(s)	1636
TauI	GCSGC	4 cut(s)	59, 146, 149, 184
TfiI	GAWTC	4 cut(s)	431, 738, 833, 1418
Tru1I	TTAA	3 cut(s)	578, 957, 1067
Tru9I	TTAA	3 cut(s)	578, 957, 1067
TseFI	GTSAC	2 cut(s)	1433, 1715
TseI	GCWGC	3 cut(s)	299, 854, 1727
Tsp45I	GTSAC	2 cut(s)	1433, 1715
TspGWI	ACGGA	1 cut(s)	1043
Vha464I	CTTAAG	1 cut(s)	1066
VneI	GTGCAC	1 cut(s)	646
VpaK11BI	GGWCC	1 cut(s)	1106
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	1 cut(s)	750
XceI	RCATGY	3 cut(s)	406, 736, 825
XspI	CTAG	2 cut(s)	702, 981
ZraI	GACGTC	1 cut(s)	540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.